Rh6BG017000
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001841
Physical Location & Seq
Forward (+)
2481915 .. 2482679
765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG017000.1

Sequence Viewer

Length: 264 bp
ATGGCAGGTGGTGGAGAGGATCACGCAATAGGGATTGACTTGGGGACAACCTATTCGTGCGTGGCAGTGTGGCAGCTCGATCGAGTTGAGATAATAGTGAACGATCAAGGCAACAGAACTACTCCATCTTATGTTGCCTTCACTGATACTGAGCAATTGGTAGGAGATGCAGCACTTAACCAGATCATCAAAAACCCTACCAACTCGGTCTTTGGTCCTGCTAATAAGTGCCTCAAGAAGCCAATTACACTTCTCGGATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

87

Amino Acids

9.25

Weight (kDa)

4.75

Isoelectric Point (pI)

21.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 71 3.3e-25 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 27
AluBI AGCT 1 cut(s) 76
AluI AGCT 1 cut(s) 76
AlwI GGATC 1 cut(s) 27
ApeKI GCWGC 2 cut(s) 73, 170
ArsI GACNNNNNNTTYG 2 cut(s) 37, 69
AspS9I GGNCC 1 cut(s) 215
AvaII GGWCC 1 cut(s) 215
BbvI GCAGC 2 cut(s) 85, 182
BccI CCATC 1 cut(s) 133
BcgI CGANNNNNNTGC 2 cut(s) 62, 96
BisI GCNGC 2 cut(s) 74, 171
BlsI GCNGC 2 cut(s) 75, 172
Bme18I GGWCC 1 cut(s) 215
BmgT120I GGNCC 1 cut(s) 215
BmsI GCATC 2 cut(s) 157, 248
BpuEI CTTGAG 1 cut(s) 218
BseGI GGATG 1 cut(s) 263
BseMII CTCAG 1 cut(s) 141
BseXI GCAGC 2 cut(s) 85, 182
Bsh1285I CGRYCG 1 cut(s) 82
BsiEI CGRYCG 1 cut(s) 82
BslFI GGGAC 1 cut(s) 58
BsmFI GGGAC 1 cut(s) 58
Bsp143I GATC 4 cut(s) 19, 79, 103, 183
BspCNI CTCAG 1 cut(s) 142
BspPI GGATC 1 cut(s) 27
BssMI GATC 4 cut(s) 19, 79, 103, 183
BstDEI CTNAG 1 cut(s) 150
BstF5I GGATG 1 cut(s) 263
BstKTI GATC 4 cut(s) 22, 82, 106, 186
BstMBI GATC 4 cut(s) 19, 79, 103, 183
BstMCI CGRYCG 1 cut(s) 82
BstV1I GCAGC 2 cut(s) 85, 182
BtsCI GGATG 1 cut(s) 263
BtsI GCAGTG 1 cut(s) 72
BtsIMutI CAGTG 2 cut(s) 72, 141
Cfr13I GGNCC 1 cut(s) 215
CviJI RGCY 2 cut(s) 76, 241
CviKI_1 RGCY 2 cut(s) 76, 241
DdeI CTNAG 1 cut(s) 150
DpnI GATC 4 cut(s) 21, 81, 105, 185
DpnII GATC 4 cut(s) 19, 79, 103, 183
Eco47I GGWCC 1 cut(s) 215
FaiI YATR 1 cut(s) 132
FaqI GGGAC 1 cut(s) 58
Fnu4HI GCNGC 2 cut(s) 74, 171
Fsp4HI GCNGC 2 cut(s) 74, 171
GluI GCNGC 2 cut(s) 74, 171
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 1 cut(s) 257
Hpy188III TCNNGA 1 cut(s) 235
Hpy8I GTNNAC 1 cut(s) 100
HpyAV CCTTC 1 cut(s) 148
HpyCH4V TGCA 1 cut(s) 170
HpyF3I CTNAG 1 cut(s) 150
Kzo9I GATC 4 cut(s) 19, 79, 103, 183
LpnPI CCDG 2 cut(s) 194, 231
Lsp1109I GCAGC 2 cut(s) 85, 182
LweI GCATC 2 cut(s) 157, 248
MalI GATC 4 cut(s) 21, 81, 105, 185
MboI GATC 4 cut(s) 19, 79, 103, 183
MfeI CAATTG 1 cut(s) 155
MluCI AATT 2 cut(s) 155, 243
MnlI CCTC 2 cut(s) 10, 242
MseI TTAA 1 cut(s) 177
MunI CAATTG 1 cut(s) 155
NdeII GATC 4 cut(s) 19, 79, 103, 183
PkrI GCNGC 2 cut(s) 75, 172
Ple19I CGATCG 1 cut(s) 82
PspPI GGNCC 1 cut(s) 215
PvuI CGATCG 1 cut(s) 82
SaqAI TTAA 1 cut(s) 177
SatI GCNGC 2 cut(s) 74, 171
Sau3AI GATC 4 cut(s) 19, 79, 103, 183
Sau96I GGNCC 1 cut(s) 215
SetI ASST 3 cut(s) 10, 53, 78
SfaNI GCATC 2 cut(s) 157, 248
SinI GGWCC 1 cut(s) 215
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 2 cut(s) 155, 243
TaqI TCGA 2 cut(s) 78, 82
TaqII GACCGA 1 cut(s) 196
TasI AATT 2 cut(s) 155, 243
Tru1I TTAA 1 cut(s) 177
Tru9I TTAA 1 cut(s) 177
TscAI CASTG 2 cut(s) 72, 148
TseI GCWGC 2 cut(s) 73, 170
TspRI CASTG 2 cut(s) 72, 148
VpaK11BI GGWCC 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.