Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001448

Physical Location & Seq

Genomic Coordinates Forward (+)

7127941 .. 7134530

Gene Structure 6590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g07690.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGCCGCCGGCCGCCGCCGCCATGTTGTCCCACCCCAAAGACGGCGCTTACCTCACCACCGTAGTTCCCAAGCGCATCGGGCTATTCATGAAAATCCATGCTCAGCAGCACGGCGAGCGTCAAGCCCTACCTTCCGATCCAATCAAGATTACATTGCCGGACGGGAAGGTGAAGGAGGGGAAGAAGTGGGTGACTTCGCCCTTCGACATTGCGAAGGAGATTTCGAAGGGGTTGGCGTCCAATGCGTTGATTTCTGGGGTCAATGGACAGCTGTGGGACACCTTCTGGCACTCCAGCGCCCATATTCTTGGAGAGGCACTTGAAGCGGAGTATGGATGCAAGCTGTGTATAGGTCCTTGCACCACTAGAGGAGAGGGTTTCTATTATGATGCATTTTATGGTGATTTGGGGTTAAATGAGGAGCACTTCAAGTTAATTGAATCAGGAGCAGACAAGGCTGTTAAGGAAAAACAACCATTTGAGCGCATTGAAGTAACAAAGGATCAGGCACTTGAGATTTTCTCTGATAATGAATTTAAGGTTGAAATCATCAACGATCTTCCAGCCGACAAAACGATCACCGTCTACAGATGTGGCCCCTTGGTTGACTTGTGTCGTGGACCGCACATACCAAACACATCGTTTGTCAAAGCATTTGCATGTTTGAAGGCTTCATCCGCCTACTGGAGAGGAAATAAAGATCGTGAAAGCTTACAGAGAGTTTATGGAATATCTTATCCTGATAAGAAAAGATTGCAGACATATCTCAAGCATTTGGAAGAAGCAAAAAAATATGATCATAGATTGTTGGGTACAAAGCAGGAGCTGTTCTTCAATCACCCACTTAGTCCAGGAAGCTGGTTCTTTCTGCCCAATGGCACCCGGATTTATAACAAGCTTATGAACTTTATAAAGAATCAATACAGAAAAAGAGGATACCAAGAGGTTATATCGCCTAACATGTACAATATGCAACTCTGGGAAACATCTGGTCATGCTGCGAATTACAAGGAGAATATGTTTGTCTTTGAGATTGAGAAACAAGAGTTTGGATTGAAGCCCATGAACTGTCCAGGGCATTGTTTAATGTTTCAGCACAGAGTTCGTTCCTATAGAGAGCTTCCTCTTCGACTGGCTGACTTCGGGGTTTTGCATCGGAATGAGGCCAGTGGTGCACTCACTGGATTAACTCGTGTCCGGAGATTCCAGCAGGATGATGCTCATATCTTTTGCAGGGAGTCACAAATAAAAGATGAAGTTAAGGGCGTCTTAGACTTCATCCAGTACACCTACGATATATTTGGCTTCACTTTTGATCTGAAGCTATCAACTAGGCCAGAAAAGTACCTTGGAGATATAGAAACATGGGAGAAAGCTGAGGCAGCTCTTACAGAGGCATTAAATGAATTTGGCAAACCCTGGCAGATAAATGAAGGGGACGGTGCATTTTACGGACCAAAGATAGATATCAGTGTATCTGATGCATTGAACAGGAAGTTTCAGTGTGCAACATTACAGCTTGATTTTCAGCTACCTGCTCGCTTTGAGCTGTATTACTCAGCAGAGGGTGAAGAAGGCAAAAGGGAGGCACCTGTTATGATTCACAGAGCTATTTTGGGTTCTGTTGAGCGTATGTTTGCTATACTGTTGGAGCACTACAAGGGGAAATGGCCATTCTGGCTTAGTCCACGTCAGGCAATTGTTTGCCCTGTCTCTGACAAATCCCAGCCCTATGCTCAACAGGTCCGGGACAGGATATTTCAAGCTGGTTATTATGTTGATGTTGACACAAGTGATAGAACCATACAGAAAAAGGTCCGAGAAGCTCAGATGGCACAGTACAACTACATTCTAGTTGTTGGCGAGGAGGAAGTCAAAACTGGACAGGTTAGCGTACGGGTTAGGGATAAGGGAGATTCCAATGTAATGAGCATGGATGGCCTTCTTGAACACTTCAAGAATGAAGTTGAAGCTTTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005886 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0030312 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon TGS tRNA-synt_2b tRNA_SAD

Protein Analysis

661

Amino Acids

75.65

Weight (kDa)

7.03

Isoelectric Point (pI)

35.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TGS	PF02824	97 - 157	8.2e-18	TGS domain
tRNA_SAD	PF07973	265 - 314	1.8e-13	Threonyl and Alanyl tRNA synthetase second additional domain
tRNA-synt_2b	PF00587	413 - 625	8.7e-46	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	637 - 726	4.8e-22	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18130 AT5G26830
fragaria_vesca	FvH4_3g11970 FvH4_4g07680 FvH4_4g07680 FvH4_4g07680 FvH4_4g07690 FvH4_4g07690 FvH4_6g47820
malus_domestica	MD13G1089000.v1.1 MD16G1089100.v1.1
prunus_persica	Prupe.1G256800_v2.0.a1 Prupe.7G261600_v2.0.a1 Prupe.8G070800_v2.0.a1 Prupe.8G074400_v2.0.a1 Prupe.8G074400_v2.0.a1
pyrus_communis	pycom13g07710 pycom16g07630
rosa_chinensis	RchiOBHm_Chr4g0400731 RchiOBHm_Chr4g0444241 RchiOBHm_Chr5g0019561 RchiOBHm_Chr5g0019571 RchiOBHm_Chr5g0025481
rosa_laevigata	RLG00000005338 RLG00000008608 RLG00000009182 RLG00000032456
rosa_multiflora	Rmu_sc0002636.1_g000026 Rmu_sc0002759.1_g000056
rosa_roxburghii	Rroxscaffold_155G00443880 Rroxscaffold_1G00058510 Rroxscaffold_3G00273610 Rroxscaffold_5G00345580
rosa_rugosa	Rorug04G0025500 Rorug04G0093800 Rorug05G0052000 Rorug06G0426500
rosa_samantha	Rh4AG103300 Rh4AG411800 Rh4CG111600 Rh4DG095200 Rh5AG142600 Rh5BG141100 Rh5CG153100 Rh5CG153200 Rh5DG141700 Rh5DG141800 Rh7CG027000 Rh7CG027200 Rh7DG026700
rosa_wichuraiana	Rw4G008360 Rw5G012620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	891, 911
Acc36I	ACCTGC	1 cut(s)	1543
AccB1I	GGYRCC	2 cut(s)	878, 1588
AccI	GTMKAC	1 cut(s)	585
AccIII	TCCGGA	1 cut(s)	1197
AciI	CCGC	7 cut(s)	5, 12, 15, 18, 326, 623, 678
AclWI	GGATC	2 cut(s)	131, 510
AcoI	YGGCCR	2 cut(s)	9, 1670
AcsI	RAATTY	2 cut(s)	533, 1406
AcuI	CTGAAG	1 cut(s)	1340
AcyI	GRCGYC	2 cut(s)	236, 1266
AfaI	GTAC	6 cut(s)	814, 965, 1286, 1346, 1841, 1896
AfiI	CCNNNNNNNGG	2 cut(s)	41, 684
AflIII	ACRYGT	1 cut(s)	960
AjiI	CACGTC	1 cut(s)	1691
AjnI	CCWGG	3 cut(s)	850, 1072, 1418
AjuI	GAANNNNNNNTTGG	2 cut(s)	1332, 1364
Alw21I	GWGCWC	3 cut(s)	426, 1177, 1656
Alw26I	GTCTC	1 cut(s)	1717
Alw44I	GTGCAC	1 cut(s)	1173
AlwI	GGATC	2 cut(s)	131, 510
AlwNI	CAGNNNCTG	1 cut(s)	826
Aor13HI	TCCGGA	1 cut(s)	1197
AoxI	GGCC	6 cut(s)	9, 595, 1164, 1334, 1670, 1939
ApaLI	GTGCAC	1 cut(s)	1173
ApeKI	GCWGC	3 cut(s)	106, 998, 1382
ApoI	RAATTY	2 cut(s)	533, 1406
Asp700I	GAANNNNTTC	1 cut(s)	1974
AspLEI	GCGC	4 cut(s)	47, 75, 299, 486
AspS9I	GGNCC	6 cut(s)	353, 596, 620, 1454, 1744, 1816
AsuC2I	CCSGG	2 cut(s)	883, 1748
AsuHPI	GGTGA	7 cut(s)	46, 181, 202, 413, 571, 830, 1580
AsuII	TTCGAA	1 cut(s)	224
AvaII	GGWCC	5 cut(s)	353, 620, 1454, 1744, 1816
BaeGI	GKGCMC	1 cut(s)	1177
BalI	TGGCCA	1 cut(s)	1672
BanI	GGYRCC	2 cut(s)	878, 1588
BauI	CACGAG	1 cut(s)	1191
Bbv12I	GWGCWC	3 cut(s)	426, 1177, 1656
BbvCI	CCTCAGC	1 cut(s)	1377
BbvI	GCAGC	3 cut(s)	118, 985, 1394
BccI	CCATC	2 cut(s)	1825, 1931
BceAI	ACGGC	2 cut(s)	58, 127
BcgI	CGANNNNNNTGC	2 cut(s)	1085, 1119
BciT130I	CCWGG	3 cut(s)	852, 1074, 1420
BciVI	GTATCC	1 cut(s)	929
BclI	TGATCA	1 cut(s)	796
BcnI	CCSGG	2 cut(s)	883, 1748
BcoDI	GTCTC	1 cut(s)	1717
BfaI	CTAG	3 cut(s)	366, 1332, 1853
BfmI	CTRYAG	2 cut(s)	586, 1111
BfoI	RGCGCY	2 cut(s)	48, 300
BfuAI	ACCTGC	1 cut(s)	1543
BfuI	GTATCC	1 cut(s)	929
BglI	GCCNNNNNGGC	1 cut(s)	1678
BisI	GCNGC	7 cut(s)	5, 12, 15, 18, 107, 999, 1383
BlpI	GCTNAGC	1 cut(s)	102
BlsI	GCNGC	7 cut(s)	6, 13, 16, 19, 108, 1000, 1384
Bme1390I	CCNGG	5 cut(s)	852, 883, 1074, 1420, 1748
Bme18I	GGWCC	5 cut(s)	353, 620, 1454, 1744, 1816
BmgBI	CACGTC	1 cut(s)	1691
BmgT120I	GGNCC	6 cut(s)	353, 596, 620, 1454, 1744, 1816
BmiI	GGNNCC	3 cut(s)	598, 880, 1590
BmrFI	CCNGG	5 cut(s)	852, 883, 1074, 1420, 1748
BmsI	GCATC	6 cut(s)	84, 326, 379, 1162, 1207, 1471
BoxI	GACNNNNGTC	1 cut(s)	612
BplI	GAGNNNNNCTC	2 cut(s)	506, 538
BpmI	CTGGAG	2 cut(s)	277, 706
Bpu10I	CCTNAGC	1 cut(s)	1377
Bpu1102I	GCTNAGC	1 cut(s)	102
Bpu14I	TTCGAA	1 cut(s)	224
BpuEI	CTTGAG	2 cut(s)	533, 752
BpuMI	CCSGG	2 cut(s)	883, 1748
BsaBI	GATNNNNATC	1 cut(s)	1466
BsaHI	GRCGYC	2 cut(s)	236, 1266
BsaJI	CCNNGG	4 cut(s)	600, 1073, 1348, 1418
BsaWI	WCCGGW	1 cut(s)	1197
BsaXI	ACNNNNNCTCC	2 cut(s)	1004, 1034
Bsc4I	CCNNNNNNNGG	2 cut(s)	41, 684
Bse118I	RCCGGY	1 cut(s)	7
Bse1I	ACTGG	6 cut(s)	689, 1137, 1167, 1186, 1282, 1885
Bse3DI	GCAATG	2 cut(s)	152, 207
Bse8I	GATNNNNATC	1 cut(s)	1466
BseAI	TCCGGA	1 cut(s)	1197
BseBI	CCWGG	3 cut(s)	852, 1074, 1420
BseDI	CCNNGG	4 cut(s)	600, 1073, 1348, 1418
BseGI	GGATG	5 cut(s)	341, 674, 1219, 1278, 1942
BseJI	GATNNNNATC	1 cut(s)	1466
BseLI	CCNNNNNNNGG	2 cut(s)	41, 684
BseMI	GCAATG	2 cut(s)	152, 207
BseMII	CTCAG	4 cut(s)	116, 1368, 1572, 1841
BseNI	ACTGG	6 cut(s)	689, 1137, 1167, 1186, 1282, 1885
BseRI	GAGGAG	3 cut(s)	384, 434, 1880
BseSI	GKGCMC	1 cut(s)	1177
BseX3I	CGGCCG	1 cut(s)	9
BseXI	GCAGC	3 cut(s)	118, 985, 1394
BseYI	CCCAGC	1 cut(s)	1725
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	6 cut(s)	11, 597, 1166, 1336, 1672, 1941
BshNI	GGYRCC	2 cut(s)	878, 1588
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	3 cut(s)	426, 1177, 1656
BsiSI	CCGG	5 cut(s)	8, 158, 883, 1198, 1747
BsiWI	CGTACG	1 cut(s)	1894
BslFI	GGGAC	4 cut(s)	13, 290, 1451, 1763
BslI	CCNNNNNNNGG	2 cut(s)	41, 684
BsmAI	GTCTC	1 cut(s)	1717
BsmFI	GGGAC	4 cut(s)	13, 290, 1451, 1763
BsnI	GGCC	6 cut(s)	11, 597, 1166, 1336, 1672, 1941
Bsp119I	TTCGAA	1 cut(s)	224
Bsp1286I	GDGCHC	3 cut(s)	426, 1177, 1656
Bsp13I	TCCGGA	1 cut(s)	1197
Bsp1407I	TGTACA	1 cut(s)	963
Bsp143I	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
Bsp1720I	GCTNAGC	1 cut(s)	102
BspACI	CCGC	7 cut(s)	5, 12, 15, 18, 326, 623, 678
BspANI	GGCC	6 cut(s)	11, 597, 1166, 1336, 1672, 1941
BspCNI	CTCAG	4 cut(s)	115, 1369, 1571, 1840
BspEI	TCCGGA	1 cut(s)	1197
BspHI	TCATGA	1 cut(s)	87
BspLI	GGNNCC	3 cut(s)	598, 880, 1590
BspMI	ACCTGC	1 cut(s)	1543
BspPI	GGATC	2 cut(s)	131, 510
BspT104I	TTCGAA	1 cut(s)	224
BspT107I	GGYRCC	2 cut(s)	878, 1588
BsrDI	GCAATG	2 cut(s)	152, 207
BsrFI	RCCGGY	1 cut(s)	7
BsrGI	TGTACA	1 cut(s)	963
BsrI	ACTGG	6 cut(s)	689, 1137, 1167, 1186, 1282, 1885
BssAI	RCCGGY	1 cut(s)	7
BssECI	CCNNGG	4 cut(s)	600, 1073, 1348, 1418
BssMI	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
BssNI	GRCGYC	2 cut(s)	236, 1266
BssSI	CACGAG	1 cut(s)	1191
BssT1I	CCWWGG	2 cut(s)	600, 1348
Bst2BI	CACGAG	1 cut(s)	1191
Bst2UI	CCWGG	3 cut(s)	852, 1074, 1420
Bst4CI	ACNGT	6 cut(s)	61, 583, 1070, 1442, 1647, 1839
Bst6I	CTCTTC	1 cut(s)	1131
BstACI	GRCGYC	2 cut(s)	236, 1266
BstAUI	TGTACA	1 cut(s)	963
BstBI	TTCGAA	1 cut(s)	224
BstC8I	GCNNGC	4 cut(s)	9, 116, 341, 1540
BstDEI	CTNAG	7 cut(s)	102, 845, 1270, 1377, 1558, 1682, 1827
BstF5I	GGATG	5 cut(s)	341, 674, 1219, 1278, 1942
BstH2I	RGCGCY	2 cut(s)	48, 300
BstHHI	GCGC	4 cut(s)	47, 75, 299, 486
BstKTI	GATC	7 cut(s)	139, 505, 559, 579, 703, 799, 1318
BstMAI	GTCTC	1 cut(s)	1717
BstMBI	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
BstMCI	CGRYCG	1 cut(s)	12
BstNI	CCWGG	3 cut(s)	852, 1074, 1420
BstNSI	RCATGY	2 cut(s)	663, 964
BstPAI	GACNNNNGTC	1 cut(s)	612
BstSCI	CCNGG	5 cut(s)	850, 881, 1072, 1418, 1746
BstSFI	CTRYAG	2 cut(s)	586, 1111
BstSLI	GKGCMC	1 cut(s)	1177
BstV1I	GCAGC	3 cut(s)	118, 985, 1394
BstXI	CCANNNNNNTGG	2 cut(s)	308, 858
BstZI	CGGCCG	1 cut(s)	9
BsuI	GTATCC	1 cut(s)	929
BsuRI	GGCC	6 cut(s)	11, 597, 1166, 1336, 1672, 1941
BtrI	CACGTC	1 cut(s)	1691
BtsCI	GGATG	5 cut(s)	341, 674, 1219, 1278, 1942
BtsIMutI	CAGTG	4 cut(s)	1174, 1179, 1477, 1508
BveI	ACCTGC	1 cut(s)	1543
Cac8I	GCNNGC	4 cut(s)	9, 116, 341, 1540
CaiI	CAGNNNCTG	1 cut(s)	826
CciI	TCATGA	1 cut(s)	87
CfoI	GCGC	4 cut(s)	47, 75, 299, 486
Cfr10I	RCCGGY	1 cut(s)	7
Cfr13I	GGNCC	6 cut(s)	353, 596, 620, 1454, 1744, 1816
CseI	GACGC	3 cut(s)	107, 225, 1255
Csp6I	GTAC	6 cut(s)	813, 964, 1285, 1345, 1840, 1895
CviAII	CATG	9 cut(s)	22, 88, 98, 660, 961, 995, 1063, 1365, 1933
CviQI	GTAC	6 cut(s)	813, 964, 1285, 1345, 1840, 1895
DdeI	CTNAG	7 cut(s)	102, 845, 1270, 1377, 1558, 1682, 1827
DpnI	GATC	7 cut(s)	138, 504, 558, 578, 702, 798, 1317
DpnII	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
EaeI	YGGCCR	2 cut(s)	9, 1670
EagI	CGGCCG	1 cut(s)	9
Eam1104I	CTCTTC	1 cut(s)	1131
EarI	CTCTTC	1 cut(s)	1131
EciI	GGCGGA	1 cut(s)	667
EclXI	CGGCCG	1 cut(s)	9
Eco130I	CCWWGG	2 cut(s)	600, 1348
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	5 cut(s)	353, 620, 1454, 1744, 1816
Eco52I	CGGCCG	1 cut(s)	9
Eco57I	CTGAAG	1 cut(s)	1340
EcoO109I	RGGNCCY	1 cut(s)	353
EcoRII	CCWGG	3 cut(s)	850, 1072, 1418
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	2 cut(s)	600, 1348
EcoT22I	ATGCAT	2 cut(s)	394, 1486
ErhI	CCWWGG	2 cut(s)	600, 1348
FaeI	CATG	9 cut(s)	25, 91, 101, 663, 964, 998, 1066, 1368, 1936
FalI	AAGNNNNNCTT	2 cut(s)	1253, 1285
FaqI	GGGAC	4 cut(s)	13, 290, 1451, 1763
FatI	CATG	9 cut(s)	21, 87, 97, 659, 960, 994, 1062, 1364, 1932
FbaI	TGATCA	1 cut(s)	796
FblI	GTMKAC	1 cut(s)	585
Fnu4HI	GCNGC	7 cut(s)	5, 12, 15, 18, 107, 999, 1383
FokI	GGATG	5 cut(s)	348, 661, 1226, 1265, 1949
Fsp4HI	GCNGC	7 cut(s)	5, 12, 15, 18, 107, 999, 1383
FspBI	CTAG	3 cut(s)	366, 1332, 1853
GlaI	GCGC	4 cut(s)	46, 74, 298, 485
GluI	GCNGC	7 cut(s)	5, 12, 15, 18, 107, 999, 1383
GsaI	CCCAGC	1 cut(s)	1729
GsuI	CTGGAG	2 cut(s)	277, 706
HaeII	RGCGCY	2 cut(s)	48, 300
HaeIII	GGCC	6 cut(s)	11, 597, 1166, 1336, 1672, 1941
HapII	CCGG	5 cut(s)	8, 158, 883, 1198, 1747
HgaI	GACGC	3 cut(s)	107, 225, 1255
HhaI	GCGC	4 cut(s)	47, 75, 299, 486
Hin1I	GRCGYC	2 cut(s)	236, 1266
Hin1II	CATG	9 cut(s)	25, 91, 101, 663, 964, 998, 1066, 1368, 1936
Hin6I	GCGC	4 cut(s)	45, 73, 297, 484
HinP1I	GCGC	4 cut(s)	45, 73, 297, 484
HincII	GTYRAC	2 cut(s)	607, 1786
HindII	GTYRAC	2 cut(s)	607, 1786
HindIII	AAGCTT	3 cut(s)	709, 896, 1971
HinfI	GANTC	6 cut(s)	440, 916, 1203, 1238, 1600, 1916
HpaII	CCGG	5 cut(s)	8, 158, 883, 1198, 1747
HphI	GGTGA	7 cut(s)	46, 181, 202, 413, 571, 830, 1580
Hpy166II	GTNNAC	7 cut(s)	586, 607, 620, 1175, 1287, 1688, 1786
Hpy188I	TCNGA	8 cut(s)	136, 526, 1158, 1320, 1480, 1717, 1820, 1830
Hpy188III	TCNNGA	8 cut(s)	88, 145, 444, 704, 740, 1198, 1946, 1957
Hpy8I	GTNNAC	7 cut(s)	586, 607, 620, 1175, 1287, 1688, 1786
HpyCH4III	ACNGT	6 cut(s)	61, 583, 1070, 1442, 1647, 1839
HpyCH4IV	ACGT	1 cut(s)	1690
HpyF3I	CTNAG	7 cut(s)	102, 845, 1270, 1377, 1558, 1682, 1827
HpySE526I	ACGT	1 cut(s)	1690
Hsp92I	GRCGYC	2 cut(s)	236, 1266
Hsp92II	CATG	9 cut(s)	25, 91, 101, 663, 964, 998, 1066, 1368, 1936
HspAI	GCGC	4 cut(s)	45, 73, 297, 484
Kpn2I	TCCGGA	1 cut(s)	1197
KroI	GCCGGC	1 cut(s)	7
KroNI	GCCGGC	1 cut(s)	9
Ksp22I	TGATCA	1 cut(s)	796
Kzo9I	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
LmnI	GCTCC	4 cut(s)	421, 446, 823, 1651
Lsp1109I	GCAGC	3 cut(s)	118, 985, 1394
LweI	GCATC	6 cut(s)	84, 326, 379, 1162, 1207, 1471
MaeI	CTAG	3 cut(s)	366, 1332, 1853
MaeII	ACGT	1 cut(s)	1690
MaeIII	GTNAC	3 cut(s)	190, 493, 1239
MalI	GATC	7 cut(s)	138, 504, 558, 578, 702, 798, 1317
MboI	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
MboII	GAAGA	6 cut(s)	193, 551, 791, 823, 1118, 1583
MfeI	CAATTG	1 cut(s)	1698
MhlI	GDGCHC	3 cut(s)	426, 1177, 1656
MlsI	TGGCCA	1 cut(s)	1672
MluCI	AATT	5 cut(s)	435, 533, 1003, 1406, 1698
MluNI	TGGCCA	1 cut(s)	1672
MlyI	GAGTC	1 cut(s)	1247
MmeI	TCCRAC	1 cut(s)	1629
Mox20I	TGGCCA	1 cut(s)	1672
Mph1103I	ATGCAT	2 cut(s)	394, 1486
MroI	TCCGGA	1 cut(s)	1197
MroNI	GCCGGC	1 cut(s)	7
MroXI	GAANNNNTTC	1 cut(s)	1974
MscI	TGGCCA	1 cut(s)	1672
MseI	TTAA	8 cut(s)	413, 434, 462, 537, 1085, 1187, 1260, 1400
MslI	CAYNNNNRTG	2 cut(s)	658, 1158
Msp20I	TGGCCA	1 cut(s)	1672
MspA1I	CMGCKG	1 cut(s)	271
MspI	CCGG	5 cut(s)	8, 158, 883, 1198, 1747
MspR9I	CCNGG	5 cut(s)	852, 883, 1074, 1420, 1748
MunI	CAATTG	1 cut(s)	1698
MvaI	CCWGG	3 cut(s)	852, 1074, 1420
NaeI	GCCGGC	1 cut(s)	9
NciI	CCSGG	2 cut(s)	883, 1748
NdeII	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
NgoMIV	GCCGGC	1 cut(s)	7
NlaIII	CATG	9 cut(s)	25, 91, 101, 663, 964, 998, 1066, 1368, 1936
NlaIV	GGNNCC	3 cut(s)	598, 880, 1590
NmuCI	GTSAC	2 cut(s)	190, 1239
NsiI	ATGCAT	2 cut(s)	394, 1486
NspI	RCATGY	2 cut(s)	663, 964
NspV	TTCGAA	1 cut(s)	224
PagI	TCATGA	1 cut(s)	87
PciI	ACATGT	1 cut(s)	960
PdiI	GCCGGC	1 cut(s)	9
PdmI	GAANNNNTTC	1 cut(s)	1974
PfeI	GAWTC	5 cut(s)	440, 916, 1203, 1600, 1916
Pfl23II	CGTACG	1 cut(s)	1894
PfoI	TCCNGGA	2 cut(s)	850, 1746
PkrI	GCNGC	7 cut(s)	6, 13, 16, 19, 108, 1000, 1384
PleI	GAGTC	1 cut(s)	1246
PpsI	GAGTC	1 cut(s)	1246
PpuMI	RGGWCCY	1 cut(s)	353
PscI	ACATGT	1 cut(s)	960
PshAI	GACNNNNGTC	1 cut(s)	612
PsiI	TTATAA	2 cut(s)	891, 911
Psp5II	RGGWCCY	1 cut(s)	353
Psp6I	CCWGG	3 cut(s)	850, 1072, 1418
PspFI	CCCAGC	1 cut(s)	1725
PspGI	CCWGG	3 cut(s)	850, 1072, 1418
PspLI	CGTACG	1 cut(s)	1894
PspN4I	GGNNCC	3 cut(s)	598, 880, 1590
PspPI	GGNCC	6 cut(s)	353, 596, 620, 1454, 1744, 1816
PspPPI	RGGWCCY	1 cut(s)	353
PstNI	CAGNNNCTG	1 cut(s)	826
PvuII	CAGCTG	1 cut(s)	271
RsaI	GTAC	6 cut(s)	814, 965, 1286, 1346, 1841, 1896
RsaNI	GTAC	6 cut(s)	813, 964, 1285, 1345, 1840, 1895
RseI	CAYNNNNRTG	2 cut(s)	658, 1158
SaqAI	TTAA	8 cut(s)	413, 434, 462, 537, 1085, 1187, 1260, 1400
SatI	GCNGC	7 cut(s)	5, 12, 15, 18, 107, 999, 1383
Sau3AI	GATC	7 cut(s)	136, 502, 556, 576, 700, 796, 1315
Sau96I	GGNCC	6 cut(s)	353, 596, 620, 1454, 1744, 1816
SchI	GAGTC	1 cut(s)	1247
ScrFI	CCNGG	5 cut(s)	852, 883, 1074, 1420, 1748
SduI	GDGCHC	3 cut(s)	426, 1177, 1656
SfaNI	GCATC	6 cut(s)	84, 326, 379, 1162, 1207, 1471
SfcI	CTRYAG	2 cut(s)	586, 1111
SfuI	TTCGAA	1 cut(s)	224
SinI	GGWCC	5 cut(s)	353, 620, 1454, 1744, 1816
SmiMI	CAYNNNNRTG	2 cut(s)	658, 1158
SmlI	CTYRAG	2 cut(s)	512, 767
SmoI	CTYRAG	2 cut(s)	512, 767
Sse9I	AATT	5 cut(s)	435, 533, 1003, 1406, 1698
SsiI	CCGC	7 cut(s)	5, 12, 15, 18, 326, 623, 678
SspMI	CTAG	3 cut(s)	366, 1332, 1853
StyD4I	CCNGG	5 cut(s)	850, 881, 1072, 1418, 1746
StyI	CCWWGG	2 cut(s)	600, 1348
TaaI	ACNGT	6 cut(s)	61, 583, 1070, 1442, 1647, 1839
TaiI	ACGT	1 cut(s)	1693
TaqI	TCGA	3 cut(s)	204, 224, 1129
TasI	AATT	5 cut(s)	435, 533, 1003, 1406, 1698
TatI	WGTACW	3 cut(s)	963, 1284, 1839
TauI	GCSGC	4 cut(s)	7, 14, 17, 20
TfiI	GAWTC	5 cut(s)	440, 916, 1203, 1600, 1916
Tru1I	TTAA	8 cut(s)	413, 434, 462, 537, 1085, 1187, 1260, 1400
Tru9I	TTAA	8 cut(s)	413, 434, 462, 537, 1085, 1187, 1260, 1400
TscAI	CASTG	4 cut(s)	1174, 1186, 1477, 1508
TseFI	GTSAC	2 cut(s)	190, 1239
TseI	GCWGC	3 cut(s)	106, 998, 1382
Tsp45I	GTSAC	2 cut(s)	190, 1239
TspGWI	ACGGA	1 cut(s)	1467
TspRI	CASTG	4 cut(s)	1174, 1186, 1477, 1508
VneI	GTGCAC	1 cut(s)	1173
VpaK11BI	GGWCC	5 cut(s)	353, 620, 1454, 1744, 1816
XapI	RAATTY	2 cut(s)	533, 1406
XceI	RCATGY	2 cut(s)	663, 964
XmiI	GTMKAC	1 cut(s)	585
XmnI	GAANNNNTTC	1 cut(s)	1974
XspI	CTAG	3 cut(s)	366, 1332, 1853
Zsp2I	ATGCAT	2 cut(s)	394, 1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.