Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001448

Physical Location & Seq

Genomic Coordinates Forward (+)

3515714 .. 3518166

Gene Structure 2453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0025500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATGCCTTTTCCGATGAAGATCCAACCGATCGATATCGATTCCGAGGCGGTGAGAGAGCCGGTCCGGATCGACTCGGCGGCCAAGCCGGTGTTGAAATCCCGGCTCCGGCGGCTGTTTGACCGGCAGTTCCCGAGCGTGCTTAGAATCTCCTCGACGGAAAAACCTACCGTCGCCGGCGGTGATTTCAACAAGGACGGCGGAGGAGGAGGAGGAGGAGCCATCGTCGAGTTCGAGCCGAGCTCGGTTTGCCTTGCGAAGATGGTTCAGAATTTCCTCGAAGAAACCAACGAGAAGCAGCAGGCGACGAAATGTGGCCGGAATCGCTGCAATTGCTTTAACGGAAACAACAATGACAGCTCCGACGACGAGCTCGACGTCTTCGGCGGCGAGTCCATCGCCACCAGCGGTTCCTTTGGCGGCGACGCCTCCGATATCCTCAAGAGCCTGATTCCATGCGCGAGTGTCCACGAGAGAAACCTCTTAGCCGACGCAGCCAAAATCGTCGAGACGAACAAGCATCTCAAACAGAAAGACGAGCTCAGAAAGATCGTCACCGATGGCCTCTCGTCTCTCGGCTACGACTCCTCCATCTGCAAATCCAAGTGGGACAAATCACCGTCTTTTCCTGCCGGTGAATACGAGTACATCGATGTGATAGTGGAGGGGGACAGGTTGTTGATTGACATCGATTTCCGATCGGAATTCGAAGTGGCGCGTCCCACTGGGGCCTACAAGGCAGTCCTTCAATCGCTGCCGTTCATTTTCGTCGGCAAATCGGACCGTCTCGGCCAGATCGTCTCCATCGTAACGGAGGCGGCGAAGCAGAGCCTCAAGAAGAAAGGAATGCCGTTTCCGCCGTGGCGGAAAGCCGAGTACGTCAGAGCCAAGTGGCTCTCTCCTTGCACAACCAGAACCACCATCTCGCAGCTCCGGAACGACGTCGTTGCTCCGGCGCCGGAGAATGGGACCGTCGTCGTTTCCGATGACCTGAGCGAGTGCGGAGAACTCGAGTTGATCTTCGGCGAGGACGCCGTGAATTCGACCGATCCGTCGCCGGAAGTTGAGGCGAAAGTGACCGGAAATTCAGTGGCGGTGGCATGGCAGCCGCCGGCGGTCAAGCCGAAGAGCGTTGAGAGAGGAGCGAGGATCGTGACCGGTTTGGCTTCGTTGCTAGCAGCAAAACCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005886 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0030312 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon TGS tRNA-synt_2b tRNA_SAD

Protein Analysis

395

Amino Acids

42.8

Weight (kDa)

5.46

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDDEXK_6	PF04720	86 - 302	3.6e-75	PDDEXK-like family of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18130 AT5G26830
fragaria_vesca	FvH4_3g11970 FvH4_4g07680 FvH4_4g07680 FvH4_4g07680 FvH4_4g07690 FvH4_4g07690 FvH4_6g47820
malus_domestica	MD13G1089000.v1.1 MD16G1089100.v1.1
prunus_persica	Prupe.1G256800_v2.0.a1 Prupe.7G261600_v2.0.a1 Prupe.8G070800_v2.0.a1 Prupe.8G074400_v2.0.a1 Prupe.8G074400_v2.0.a1
pyrus_communis	pycom13g07710 pycom16g07630
rosa_chinensis	RchiOBHm_Chr4g0400731 RchiOBHm_Chr4g0444241 RchiOBHm_Chr5g0019561 RchiOBHm_Chr5g0019571 RchiOBHm_Chr5g0025481
rosa_laevigata	RLG00000005338 RLG00000008608 RLG00000009182 RLG00000032456
rosa_multiflora	Rmu_sc0002636.1_g000026 Rmu_sc0002759.1_g000056
rosa_roxburghii	Rroxscaffold_155G00443880 Rroxscaffold_1G00058510 Rroxscaffold_3G00273610 Rroxscaffold_5G00345580
rosa_rugosa	Rorug04G0025500 Rorug04G0093800 Rorug05G0052000 Rorug06G0426500
rosa_samantha	Rh4AG103300 Rh4AG411800 Rh4CG111600 Rh4DG095200 Rh5AG142600 Rh5BG141100 Rh5CG153100 Rh5CG153200 Rh5DG141700 Rh5DG141800 Rh7CG027000 Rh7CG027200 Rh7DG026700
rosa_wichuraiana	Rw4G008360 Rw5G012620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1048
AatII	GACGTC	2 cut(s)	378, 942
AccB1I	GGYRCC	1 cut(s)	952
AccII	CGCG	2 cut(s)	458, 715
AccIII	TCCGGA	2 cut(s)	63, 930
AclWI	GGATC	4 cut(s)	13, 74, 1040, 1154
AcoI	YGGCCR	3 cut(s)	78, 313, 787
AcsI	RAATTY	4 cut(s)	268, 701, 1036, 1081
AcyI	GRCGYC	5 cut(s)	375, 423, 939, 953, 1029
AfaI	GTAC	2 cut(s)	644, 875
AfiI	CCNNNNNNNGG	2 cut(s)	105, 962
AgeI	ACCGGT	1 cut(s)	1154
AgsI	TTSAA	3 cut(s)	94, 187, 746
AluBI	AGCT	5 cut(s)	240, 357, 370, 538, 928
AluI	AGCT	5 cut(s)	240, 357, 370, 538, 928
Alw21I	GWGCWC	3 cut(s)	242, 372, 540
Alw26I	GTCTC	4 cut(s)	500, 573, 788, 802
AlwI	GGATC	4 cut(s)	13, 74, 1040, 1154
Ama87I	CYCGRG	2 cut(s)	130, 1007
Aor13HI	TCCGGA	2 cut(s)	63, 930
AoxI	GGCC	5 cut(s)	78, 313, 559, 726, 787
ApeKI	GCWGC	7 cut(s)	295, 324, 491, 751, 925, 1102, 1175
ApoI	RAATTY	4 cut(s)	268, 701, 1036, 1081
AsiGI	ACCGGT	1 cut(s)	1154
AspLEI	GCGC	3 cut(s)	458, 715, 955
AspS9I	GGNCC	4 cut(s)	61, 726, 778, 966
AsuC2I	CCSGG	1 cut(s)	100
AsuHPI	GGTGA	5 cut(s)	61, 191, 544, 606, 644
AsuII	TTCGAA	1 cut(s)	705
AsuNHI	GCTAGC	1 cut(s)	1171
AvaI	CYCGRG	2 cut(s)	130, 1007
AvaII	GGWCC	3 cut(s)	61, 778, 966
BanI	GGYRCC	1 cut(s)	952
BanII	GRGCYC	3 cut(s)	242, 372, 540
BauI	CACGAG	1 cut(s)	467
BbsI	GAAGAC	1 cut(s)	370
Bbv12I	GWGCWC	3 cut(s)	242, 372, 540
BbvI	GCAGC	6 cut(s)	307, 311, 503, 738, 937, 1114
BccI	CCATC	7 cut(s)	227, 253, 401, 551, 596, 809, 926
BceAI	ACGGC	5 cut(s)	211, 739, 832, 841, 1016
BcgI	CGANNNNNNTGC	2 cut(s)	926, 960
BcnI	CCSGG	1 cut(s)	100
BcoDI	GTCTC	4 cut(s)	500, 573, 788, 802
BfaI	CTAG	1 cut(s)	1172
BfoI	RGCGCY	1 cut(s)	956
BglI	GCCNNNNNGGC	1 cut(s)	734
Bme1390I	CCNGG	1 cut(s)	100
Bme18I	GGWCC	3 cut(s)	61, 778, 966
BmeT110I	CYCGRG	2 cut(s)	130, 1007
BmgT120I	GGNCC	4 cut(s)	61, 726, 778, 966
BmiI	GGNNCC	6 cut(s)	104, 217, 409, 727, 954, 967
BmrFI	CCNGG	1 cut(s)	100
BmrI	ACTGGG	1 cut(s)	732
BmsI	GCATC	1 cut(s)	526
BmtI	GCTAGC	1 cut(s)	1175
BmuI	ACTGGG	1 cut(s)	732
BoxI	GACNNNNGTC	1 cut(s)	971
BpiI	GAAGAC	1 cut(s)	370
BplI	GAGNNNNNCTC	2 cut(s)	224, 256
Bpu10I	CCTNAGC	1 cut(s)	989
Bpu14I	TTCGAA	1 cut(s)	705
BpuEI	CTTGAG	2 cut(s)	422, 815
BpuMI	CCSGG	1 cut(s)	100
Bsa29I	ATCGAT	4 cut(s)	30, 36, 648, 687
BsaBI	GATNNNNATC	3 cut(s)	17, 32, 683
BsaHI	GRCGYC	5 cut(s)	375, 423, 939, 953, 1029
BsaJI	CCNNGG	2 cut(s)	42, 857
BsaWI	WCCGGW	4 cut(s)	63, 930, 1076, 1154
BsaXI	ACNNNNNCTCC	4 cut(s)	207, 237, 569, 599
Bsc4I	CCNNNNNNNGG	2 cut(s)	105, 962
Bse118I	RCCGGY	7 cut(s)	58, 85, 120, 173, 629, 1108, 1154
Bse1I	ACTGG	1 cut(s)	727
Bse8I	GATNNNNATC	3 cut(s)	17, 32, 683
BseAI	TCCGGA	2 cut(s)	63, 930
BseCI	ATCGAT	4 cut(s)	30, 36, 648, 687
BseDI	CCNNGG	2 cut(s)	42, 857
BseJI	GATNNNNATC	3 cut(s)	17, 32, 683
BseLI	CCNNNNNNNGG	2 cut(s)	105, 962
BseMII	CTCAG	2 cut(s)	553, 980
BseNI	ACTGG	1 cut(s)	727
BseRI	GAGGAG	8 cut(s)	139, 216, 219, 222, 225, 228, 574, 1152
BseXI	GCAGC	6 cut(s)	307, 311, 503, 738, 937, 1114
Bsh1236I	CGCG	2 cut(s)	458, 715
Bsh1285I	CGRYCG	3 cut(s)	30, 698, 1044
BshFI	GGCC	5 cut(s)	80, 315, 561, 728, 789
BshNI	GGYRCC	1 cut(s)	952
BshTI	ACCGGT	1 cut(s)	1154
BshVI	ATCGAT	4 cut(s)	30, 36, 648, 687
BsiEI	CGRYCG	3 cut(s)	30, 698, 1044
BsiHKAI	GWGCWC	3 cut(s)	242, 372, 540
BsiHKCI	CYCGRG	2 cut(s)	130, 1007
BslFI	GGGAC	4 cut(s)	620, 680, 702, 979
BslI	CCNNNNNNNGG	2 cut(s)	105, 962
BsmAI	GTCTC	4 cut(s)	500, 573, 788, 802
BsmBI	CGTCTC	4 cut(s)	500, 573, 788, 802
BsmFI	GGGAC	4 cut(s)	620, 680, 702, 979
BsmI	GAATGC	1 cut(s)	849
BsnI	GGCC	5 cut(s)	80, 315, 561, 728, 789
BsoBI	CYCGRG	2 cut(s)	130, 1007
Bsp119I	TTCGAA	1 cut(s)	705
Bsp1286I	GDGCHC	3 cut(s)	242, 372, 540
Bsp13I	TCCGGA	2 cut(s)	63, 930
Bsp143I	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
BspANI	GGCC	5 cut(s)	80, 315, 561, 728, 789
BspCNI	CTCAG	2 cut(s)	552, 981
BspDI	ATCGAT	4 cut(s)	30, 36, 648, 687
BspEI	TCCGGA	2 cut(s)	63, 930
BspFNI	CGCG	2 cut(s)	458, 715
BspLI	GGNNCC	6 cut(s)	104, 217, 409, 727, 954, 967
BspOI	GCTAGC	1 cut(s)	1175
BspPI	GGATC	4 cut(s)	13, 74, 1040, 1154
BspQI	GCTCTTC	1 cut(s)	1118
BspT104I	TTCGAA	1 cut(s)	705
BspT107I	GGYRCC	1 cut(s)	952
BsrFI	RCCGGY	7 cut(s)	58, 85, 120, 173, 629, 1108, 1154
BsrI	ACTGG	1 cut(s)	727
BssAI	RCCGGY	7 cut(s)	58, 85, 120, 173, 629, 1108, 1154
BssECI	CCNNGG	2 cut(s)	42, 857
BssMI	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
BssNI	GRCGYC	5 cut(s)	375, 423, 939, 953, 1029
BssSI	CACGAG	1 cut(s)	467
Bst2BI	CACGAG	1 cut(s)	467
Bst4CI	ACNGT	5 cut(s)	169, 618, 782, 970, 1185
Bst6I	CTCTTC	1 cut(s)	1118
BstACI	GRCGYC	5 cut(s)	375, 423, 939, 953, 1029
BstBI	TTCGAA	1 cut(s)	705
BstC8I	GCNNGC	5 cut(s)	137, 175, 300, 1110, 1173
BstDEI	CTNAG	4 cut(s)	140, 481, 539, 989
BstDSI	CCRYGG	1 cut(s)	857
BstFNI	CGCG	2 cut(s)	458, 715
BstH2I	RGCGCY	1 cut(s)	956
BstHHI	GCGC	3 cut(s)	458, 715, 955
BstKTI	GATC	9 cut(s)	21, 30, 69, 549, 698, 795, 1017, 1048, 1149
BstMAI	GTCTC	4 cut(s)	500, 573, 788, 802
BstMBI	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
BstMCI	CGRYCG	3 cut(s)	30, 698, 1044
BstMWI	GCNNNNNNNGC	7 cut(s)	109, 246, 321, 330, 491, 734, 853
BstPAI	GACNNNNGTC	1 cut(s)	971
BstSCI	CCNGG	1 cut(s)	98
BstUI	CGCG	2 cut(s)	458, 715
BstV1I	GCAGC	6 cut(s)	307, 311, 503, 738, 937, 1114
BstV2I	GAAGAC	1 cut(s)	370
BstX2I	RGATCY	1 cut(s)	18
BstYI	RGATCY	1 cut(s)	18
Bsu15I	ATCGAT	4 cut(s)	30, 36, 648, 687
BsuRI	GGCC	5 cut(s)	80, 315, 561, 728, 789
BsuTUI	ATCGAT	4 cut(s)	30, 36, 648, 687
BtgI	CCRYGG	1 cut(s)	857
BtgZI	GCGATG	1 cut(s)	379
BtsIMutI	CAGTG	2 cut(s)	720, 1092
Cac8I	GCNNGC	5 cut(s)	137, 175, 300, 1110, 1173
CfoI	GCGC	3 cut(s)	458, 715, 955
Cfr10I	RCCGGY	7 cut(s)	58, 85, 120, 173, 629, 1108, 1154
Cfr13I	GGNCC	4 cut(s)	61, 726, 778, 966
ClaI	ATCGAT	4 cut(s)	30, 36, 648, 687
CpoI	CGGWCCG	2 cut(s)	61, 778
CseI	GACGC	4 cut(s)	431, 497, 704, 1037
Csp6I	GTAC	2 cut(s)	643, 874
CspAI	ACCGGT	1 cut(s)	1154
CspI	CGGWCCG	2 cut(s)	61, 778
CviAII	CATG	2 cut(s)	453, 1098
CviQI	GTAC	2 cut(s)	643, 874
DdeI	CTNAG	4 cut(s)	140, 481, 539, 989
DinI	GGCGCC	1 cut(s)	954
DpnI	GATC	9 cut(s)	20, 29, 68, 548, 697, 794, 1016, 1047, 1148
DpnII	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
DrdI	GACNNNNNNGTC	1 cut(s)	1048
DseDI	GACNNNNNNGTC	1 cut(s)	1048
EaeI	YGGCCR	3 cut(s)	78, 313, 787
Eam1104I	CTCTTC	1 cut(s)	1118
EarI	CTCTTC	1 cut(s)	1118
EciI	GGCGGA	3 cut(s)	213, 843, 877
Ecl136II	GAGCTC	3 cut(s)	240, 370, 538
Eco24I	GRGCYC	3 cut(s)	242, 372, 540
Eco32I	GATATC	2 cut(s)	34, 433
Eco47I	GGWCC	3 cut(s)	61, 778, 966
Eco53kI	GAGCTC	3 cut(s)	240, 370, 538
Eco88I	CYCGRG	2 cut(s)	130, 1007
EcoICRI	GAGCTC	3 cut(s)	240, 370, 538
EcoO109I	RGGNCCY	1 cut(s)	726
EcoRI	GAATTC	2 cut(s)	701, 1036
EcoRV	GATATC	2 cut(s)	34, 433
EcoT38I	GRGCYC	3 cut(s)	242, 372, 540
EgeI	GGCGCC	1 cut(s)	954
EheI	GGCGCC	1 cut(s)	954
Esp3I	CGTCTC	4 cut(s)	500, 573, 788, 802
FaeI	CATG	2 cut(s)	456, 1101
FaiI	YATR	2 cut(s)	454, 1099
FaqI	GGGAC	4 cut(s)	620, 680, 702, 979
FatI	CATG	2 cut(s)	452, 1097
FriOI	GRGCYC	3 cut(s)	242, 372, 540
FspBI	CTAG	1 cut(s)	1172
GlaI	GCGC	3 cut(s)	457, 714, 954
HaeII	RGCGCY	1 cut(s)	956
HaeIII	GGCC	5 cut(s)	80, 315, 561, 728, 789
HgaI	GACGC	4 cut(s)	431, 497, 704, 1037
HhaI	GCGC	3 cut(s)	458, 715, 955
Hin1I	GRCGYC	5 cut(s)	375, 423, 939, 953, 1029
Hin1II	CATG	2 cut(s)	456, 1101
Hin6I	GCGC	3 cut(s)	456, 713, 953
HinP1I	GCGC	3 cut(s)	456, 713, 953
HinfI	GANTC	7 cut(s)	38, 71, 144, 319, 389, 448, 581
HphI	GGTGA	5 cut(s)	61, 191, 544, 606, 644
Hpy166II	GTNNAC	1 cut(s)	466
Hpy188III	TCNNGA	7 cut(s)	64, 130, 439, 505, 832, 931, 1150
Hpy8I	GTNNAC	1 cut(s)	466
HpyAV	CCTTC	1 cut(s)	752
HpyCH4III	ACNGT	5 cut(s)	169, 618, 782, 970, 1185
HpyCH4IV	ACGT	3 cut(s)	375, 876, 939
HpyCH4V	TGCA	3 cut(s)	327, 594, 903
HpyF10VI	GCNNNNNNNGC	7 cut(s)	109, 246, 321, 330, 491, 734, 853
HpyF3I	CTNAG	4 cut(s)	140, 481, 539, 989
HpySE526I	ACGT	3 cut(s)	375, 876, 939
Hsp92I	GRCGYC	5 cut(s)	375, 423, 939, 953, 1029
Hsp92II	CATG	2 cut(s)	456, 1101
HspAI	GCGC	3 cut(s)	456, 713, 953
KasI	GGCGCC	1 cut(s)	952
Kpn2I	TCCGGA	2 cut(s)	63, 930
KroI	GCCGGC	2 cut(s)	173, 1108
KroNI	GCCGGC	2 cut(s)	175, 1110
Kzo9I	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
LguI	GCTCTTC	1 cut(s)	1118
LmnI	GCTCC	6 cut(s)	108, 215, 362, 933, 952, 1139
Lsp1109I	GCAGC	6 cut(s)	307, 311, 503, 738, 937, 1114
LweI	GCATC	1 cut(s)	526
MaeI	CTAG	1 cut(s)	1172
MaeII	ACGT	3 cut(s)	375, 876, 939
MaeIII	GTNAC	4 cut(s)	550, 805, 1072, 1150
MalI	GATC	9 cut(s)	20, 29, 68, 548, 697, 794, 1016, 1047, 1148
MboI	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
MboII	GAAGA	7 cut(s)	28, 268, 290, 370, 847, 1009, 1135
MfeI	CAATTG	1 cut(s)	328
MflI	RGATCY	1 cut(s)	18
MhlI	GDGCHC	3 cut(s)	242, 372, 540
MluCI	AATT	5 cut(s)	268, 328, 701, 1036, 1081
Mly113I	GGCGCC	1 cut(s)	953
MlyI	GAGTC	3 cut(s)	65, 398, 575
MmeI	TCCRAC	2 cut(s)	46, 384
MreI	CGCCGGCG	2 cut(s)	173, 1108
MroI	TCCGGA	2 cut(s)	63, 930
MroNI	GCCGGC	2 cut(s)	173, 1108
MseI	TTAA	1 cut(s)	336
MslI	CAYNNNNRTG	1 cut(s)	650
MspA1I	CMGCKG	1 cut(s)	405
MspR9I	CCNGG	1 cut(s)	100
MunI	CAATTG	1 cut(s)	328
Mva1269I	GAATGC	1 cut(s)	849
MvnI	CGCG	2 cut(s)	458, 715
MwoI	GCNNNNNNNGC	7 cut(s)	109, 246, 321, 330, 491, 734, 853
NaeI	GCCGGC	2 cut(s)	175, 1110
NarI	GGCGCC	1 cut(s)	953
NciI	CCSGG	1 cut(s)	100
NdeII	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
NgoMIV	GCCGGC	2 cut(s)	173, 1108
NheI	GCTAGC	1 cut(s)	1171
NlaIII	CATG	2 cut(s)	456, 1101
NlaIV	GGNNCC	6 cut(s)	104, 217, 409, 727, 954, 967
NmeAIII	GCCGAG	5 cut(s)	53, 261, 552, 765, 895
NmuCI	GTSAC	3 cut(s)	550, 1072, 1150
NspV	TTCGAA	1 cut(s)	705
PaeR7I	CTCGAG	1 cut(s)	1007
PciSI	GCTCTTC	1 cut(s)	1118
PcsI	WCGNNNNNNNCGW	9 cut(s)	228, 369, 372, 645, 792, 801, 815, 978, 1046
PctI	GAATGC	1 cut(s)	849
PdiI	GCCGGC	2 cut(s)	175, 1110
PfeI	GAWTC	4 cut(s)	38, 144, 319, 448
PinAI	ACCGGT	1 cut(s)	1154
Ple19I	CGATCG	2 cut(s)	30, 698
PleI	GAGTC	3 cut(s)	65, 397, 575
PluTI	GGCGCC	1 cut(s)	956
PpsI	GAGTC	3 cut(s)	65, 397, 575
PshAI	GACNNNNGTC	1 cut(s)	971
Psp124BI	GAGCTC	3 cut(s)	242, 372, 540
PspN4I	GGNNCC	6 cut(s)	104, 217, 409, 727, 954, 967
PspPI	GGNCC	4 cut(s)	61, 726, 778, 966
PspXI	VCTCGAGB	1 cut(s)	1007
PsuI	RGATCY	1 cut(s)	18
PvuI	CGATCG	2 cut(s)	30, 698
RsaI	GTAC	2 cut(s)	644, 875
RsaNI	GTAC	2 cut(s)	643, 874
RseI	CAYNNNNRTG	1 cut(s)	650
Rsr2I	CGGWCCG	2 cut(s)	61, 778
RsrII	CGGWCCG	2 cut(s)	61, 778
SacI	GAGCTC	3 cut(s)	242, 372, 540
SapI	GCTCTTC	1 cut(s)	1118
SaqAI	TTAA	1 cut(s)	336
Sau3AI	GATC	9 cut(s)	18, 27, 66, 546, 695, 792, 1014, 1045, 1146
Sau96I	GGNCC	4 cut(s)	61, 726, 778, 966
SchI	GAGTC	3 cut(s)	65, 398, 575
ScrFI	CCNGG	1 cut(s)	100
SduI	GDGCHC	3 cut(s)	242, 372, 540
SfaNI	GCATC	1 cut(s)	526
SfoI	GGCGCC	1 cut(s)	954
Sfr274I	CTCGAG	1 cut(s)	1007
SfuI	TTCGAA	1 cut(s)	705
SgrAI	CRCCGGYG	2 cut(s)	173, 1108
SinI	GGWCC	3 cut(s)	61, 778, 966
SlaI	CTCGAG	1 cut(s)	1007
SmiMI	CAYNNNNRTG	1 cut(s)	650
SmlI	CTYRAG	3 cut(s)	437, 830, 1007
SmoI	CTYRAG	3 cut(s)	437, 830, 1007
Sse9I	AATT	5 cut(s)	268, 328, 701, 1036, 1081
SspDI	GGCGCC	1 cut(s)	952
SspMI	CTAG	1 cut(s)	1172
SstI	GAGCTC	3 cut(s)	242, 372, 540
StyD4I	CCNGG	1 cut(s)	98
TaaI	ACNGT	5 cut(s)	169, 618, 782, 970, 1185
TaiI	ACGT	3 cut(s)	378, 879, 942
TaqII	GACCGA	1 cut(s)	1058
TasI	AATT	5 cut(s)	268, 328, 701, 1036, 1081
TatI	WGTACW	1 cut(s)	642
TauI	GCSGC	6 cut(s)	80, 112, 387, 420, 818, 1108
TfiI	GAWTC	4 cut(s)	38, 144, 319, 448
Tru1I	TTAA	1 cut(s)	336
Tru9I	TTAA	1 cut(s)	336
TscAI	CASTG	2 cut(s)	727, 1092
TseFI	GTSAC	3 cut(s)	550, 1072, 1150
TseI	GCWGC	7 cut(s)	295, 324, 491, 751, 925, 1102, 1175
Tsp45I	GTSAC	3 cut(s)	550, 1072, 1150
TspDTI	ATGAA	2 cut(s)	29, 748
TspGWI	ACGGA	4 cut(s)	170, 354, 824, 1038
TspRI	CASTG	2 cut(s)	727, 1092
VpaK11BI	GGWCC	3 cut(s)	61, 778, 966
XapI	RAATTY	4 cut(s)	268, 701, 1036, 1081
XhoI	CTCGAG	1 cut(s)	1007
XspI	CTAG	1 cut(s)	1172
ZraI	GACGTC	2 cut(s)	376, 940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.