Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000155

Orthogroup ID

OG0001448

Physical Location & Seq

Genomic Coordinates Forward (+)

68390 .. 70405

Gene Structure 2016 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_155G00443880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGTGCTGGACAGCGTAATTCCCAAGCGCATCAAGCTCTTCGAGGCCATCCAGGCTGAGCAGCTCGCCCAGCGCCAAGCCCTCCCGTCCGATCCAATCAAGATTACAATATTGCCGGACGGGAAGGTGAAGGAGGGAAAGAAGCCTTTGGAGGGTGACTGTGAGCTGAAGCTGTTCACATTTGACAGTGATGAAGGCCGGGACACTTTCTGGCATTCTAGCGCACACATTCTCGGACAGGCACTTGAGGGTTTGTATGGATGTAAACTCTGCATTGGTCCCTGCCACACTAGTAGAGAAGAGGGTTTCTATTATGATGCGTTTTATGGTGATTTGGGGTTGAAAGATGAACACTTGAAGCTAATTGACTCAGAAGCAGACAAGGCTGTTAAGGCCAAACAGCCATTTGAGCGCATTCAAGTATCAAGGGATCAAGCACTTGAAATTTTCTCTGATAATAGATTCAAGGTTGAAATCATCAATGATCTTCCAGCTGATGACAAAACTATCAGAGTCTACAGATGTGGCTCCTTGGTTGATTTGTGTTGTGGACCGCACATACCAAACACATCATTTGTCAAAGCATTTGCATGTGTGAATGCTTCTTCTGCCTACTGGAGAGGAAATAAAGACCGTGAAAGCTTACAGAGAGTTTATGGAGTGTCTTATCCTGATAAGAAAGGAAGTTGGTTCTTCCTGCCCAATGGCACCCTAATTTATAACAAGCTTATGGAGTTTATAAAGAATCAATATAGAGAAAGAGGATACCAAGAGCTTCCTCTTCGACTGGCTGACTTTGGGGTTTTGCACCGGAATGAGGCCAGTGGTGCACTCACTGGATTAATTCGTGTCAGGAGATTCCAGCAGGATGATGCTCATATCTTTTCCAGGGAGTCACAAATCAAAGATGAAGTTAAGGGCGTCTTAGACTTCATCCAGTATGTCTACGATATATTTGGCTTCACTTTTGATCTGAAGCTATCAACAAGGCCAGAAAAGTACCTTGGAGAGATAGAAACATGGGAGAAAGCTGAGGCAGCTCGTACAGATGCATTAAATGAGTTTGGCAAACCCTGGCAGATAAATAAAGGGGATGGTGCATTTTATGGACCAAAGATAGATATCAGTGTATCTGATGCATTAAACAGGAAGTTTCAGTGTGCAACATTACAGCTTGATTTTCAGCTACCTGCTCGCTTTGAGCTGTATTACTCAGCAGAGGGTGAAGAAGGCAAGAGGGAGGCACCTGTTATGATACACAGAGCCATTTTGGGTTCTGTCGAGCGTATGTTTGCTATACTGTTGGAGCACTACAAGGGGAAATGGCCGTTCTGGCTTTGTCCACGTCAGGCAATTGTTTGCCCTGTCTCGGAAAAATCCCAGCCCTATGCTCAACAGGTCCGGGACAAGATCTTTTTGGCTGGTTATTGTGTTGATGTTAACGCAAGTGATAGGACCATACAGAAAAAGGTACGAGAAGCTCAGATGGCAAAGTACAACTACATTCTAATTGTTGGTGAGGAGGAAGTCAAAACTGGACAGGTGAGCGTACAGCTTAGAGATAAGAGAGATTCAACAGTAATGAGCATGGATAGCCTACTCAAACACTTCAAGGACAAAGTTGAAGCTTTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005886 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0030312 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon TGS tRNA-synt_2b tRNA_SAD

Protein Analysis

545

Amino Acids

62.43

Weight (kDa)

6.63

Isoelectric Point (pI)

32.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_SAD	PF07973	170 - 219	2.7e-14	Threonyl and Alanyl tRNA synthetase second additional domain
tRNA-synt_2b	PF00587	247 - 438	3.3e-36	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	450 - 539	1.7e-18	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18130 AT5G26830
fragaria_vesca	FvH4_3g11970 FvH4_4g07680 FvH4_4g07680 FvH4_4g07680 FvH4_4g07690 FvH4_4g07690 FvH4_6g47820
malus_domestica	MD13G1089000.v1.1 MD16G1089100.v1.1
prunus_persica	Prupe.1G256800_v2.0.a1 Prupe.7G261600_v2.0.a1 Prupe.8G070800_v2.0.a1 Prupe.8G074400_v2.0.a1 Prupe.8G074400_v2.0.a1
pyrus_communis	pycom13g07710 pycom16g07630
rosa_chinensis	RchiOBHm_Chr4g0400731 RchiOBHm_Chr4g0444241 RchiOBHm_Chr5g0019561 RchiOBHm_Chr5g0019571 RchiOBHm_Chr5g0025481
rosa_laevigata	RLG00000005338 RLG00000008608 RLG00000009182 RLG00000032456
rosa_multiflora	Rmu_sc0002636.1_g000026 Rmu_sc0002759.1_g000056
rosa_roxburghii	Rroxscaffold_155G00443880 Rroxscaffold_1G00058510 Rroxscaffold_3G00273610 Rroxscaffold_5G00345580
rosa_rugosa	Rorug04G0025500 Rorug04G0093800 Rorug05G0052000 Rorug06G0426500
rosa_samantha	Rh4AG103300 Rh4AG411800 Rh4CG111600 Rh4DG095200 Rh5AG142600 Rh5BG141100 Rh5CG153100 Rh5CG153200 Rh5DG141700 Rh5DG141800 Rh7CG027000 Rh7CG027200 Rh7DG026700
rosa_wichuraiana	Rw4G008360 Rw5G012620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	720, 740
Acc36I	ACCTGC	1 cut(s)	1198
AccB1I	GGYRCC	2 cut(s)	707, 1243
AccI	GTMKAC	2 cut(s)	516, 945
AciI	CCGC	1 cut(s)	554
AclWI	GGATC	2 cut(s)	86, 438
AcoI	YGGCCR	1 cut(s)	1325
AcsI	RAATTY	1 cut(s)	444
AcuI	CTGAAG	2 cut(s)	188, 995
AcyI	GRCGYC	1 cut(s)	921
AfaI	GTAC	5 cut(s)	1001, 1045, 1473, 1496, 1551
AfiI	CCNNNNNNNGG	3 cut(s)	152, 817, 1369
AgsI	TTSAA	9 cut(s)	343, 358, 419, 443, 466, 473, 1575, 1612, 1625
AhlI	ACTAGT	1 cut(s)	290
AjiI	CACGTC	1 cut(s)	1346
AjnI	CCWGG	3 cut(s)	51, 887, 1073
AjuI	GAANNNNNNNTTGG	2 cut(s)	987, 1019
Alw21I	GWGCWC	2 cut(s)	832, 1311
Alw26I	GTCTC	1 cut(s)	1372
Alw44I	GTGCAC	1 cut(s)	828
AlwI	GGATC	2 cut(s)	86, 438
AoxI	GGCC	6 cut(s)	45, 196, 393, 819, 989, 1325
ApaLI	GTGCAC	1 cut(s)	828
ApeKI	GCWGC	2 cut(s)	61, 1037
ApoI	RAATTY	1 cut(s)	444
AseI	ATTAAT	1 cut(s)	842
Asp700I	GAANNNNTTC	2 cut(s)	173, 1629
AspLEI	GCGC	4 cut(s)	30, 75, 224, 414
AspS9I	GGNCC	5 cut(s)	278, 551, 1109, 1399, 1455
AsuC2I	CCSGG	2 cut(s)	200, 1403
AsuHPI	GGTGA	6 cut(s)	139, 167, 341, 1235, 1529, 1555
AvaII	GGWCC	5 cut(s)	278, 551, 1109, 1399, 1455
BaeGI	GKGCMC	1 cut(s)	832
BanI	GGYRCC	2 cut(s)	707, 1243
Bbv12I	GWGCWC	2 cut(s)	832, 1311
BbvCI	CCTCAGC	1 cut(s)	1032
BbvI	GCAGC	2 cut(s)	73, 1049
BccI	CCATC	3 cut(s)	56, 1088, 1480
BceAI	ACGGC	1 cut(s)	1312
BciT130I	CCWGG	3 cut(s)	53, 889, 1075
BciVI	GTATCC	1 cut(s)	758
BcnI	CCSGG	2 cut(s)	200, 1403
BcoDI	GTCTC	1 cut(s)	1372
BcuI	ACTAGT	1 cut(s)	290
BfaI	CTAG	2 cut(s)	219, 291
BfmI	CTRYAG	1 cut(s)	517
BfoI	RGCGCY	1 cut(s)	76
BfuAI	ACCTGC	1 cut(s)	1198
BfuI	GTATCC	1 cut(s)	758
BglI	GCCNNNNNGGC	2 cut(s)	53, 1333
BglII	AGATCT	1 cut(s)	1410
BisI	GCNGC	2 cut(s)	62, 1038
BlpI	GCTNAGC	1 cut(s)	57
BlsI	GCNGC	2 cut(s)	63, 1039
Bme1390I	CCNGG	5 cut(s)	53, 200, 889, 1075, 1403
Bme18I	GGWCC	5 cut(s)	278, 551, 1109, 1399, 1455
BmgBI	CACGTC	1 cut(s)	1346
BmgT120I	GGNCC	5 cut(s)	278, 551, 1109, 1399, 1455
BmiI	GGNNCC	4 cut(s)	280, 529, 709, 1245
BmrFI	CCNGG	5 cut(s)	53, 200, 889, 1075, 1403
BmsI	GCATC	5 cut(s)	39, 307, 862, 1039, 1126
BpmI	CTGGAG	1 cut(s)	637
Bpu10I	CCTNAGC	1 cut(s)	1032
Bpu1102I	GCTNAGC	1 cut(s)	57
BpuEI	CTTGAG	1 cut(s)	266
BpuMI	CCSGG	2 cut(s)	200, 1403
BsaBI	GATNNNNATC	1 cut(s)	1121
BsaHI	GRCGYC	1 cut(s)	921
BsaJI	CCNNGG	4 cut(s)	531, 888, 1003, 1073
BsaWI	WCCGGW	1 cut(s)	810
Bsc4I	CCNNNNNNNGG	3 cut(s)	152, 817, 1369
Bse1I	ACTGG	6 cut(s)	620, 792, 822, 841, 937, 1540
Bse8I	GATNNNNATC	1 cut(s)	1121
BseBI	CCWGG	3 cut(s)	53, 889, 1075
BseDI	CCNNGG	4 cut(s)	531, 888, 1003, 1073
BseGI	GGATG	5 cut(s)	48, 266, 874, 933, 1099
BseJI	GATNNNNATC	1 cut(s)	1121
BseLI	CCNNNNNNNGG	3 cut(s)	152, 817, 1369
BseMII	CTCAG	5 cut(s)	48, 384, 1023, 1227, 1496
BseNI	ACTGG	6 cut(s)	620, 792, 822, 841, 937, 1540
BseRI	GAGGAG	1 cut(s)	1535
BseSI	GKGCMC	1 cut(s)	832
BseXI	GCAGC	2 cut(s)	73, 1049
BseYI	CCCAGC	2 cut(s)	69, 1380
BshFI	GGCC	6 cut(s)	47, 198, 395, 821, 991, 1327
BshNI	GGYRCC	2 cut(s)	707, 1243
BsiHKAI	GWGCWC	2 cut(s)	832, 1311
BsiSI	CCGG	4 cut(s)	116, 199, 811, 1402
BslFI	GGGAC	3 cut(s)	215, 264, 1418
BslI	CCNNNNNNNGG	3 cut(s)	152, 817, 1369
BsmAI	GTCTC	1 cut(s)	1372
BsmFI	GGGAC	3 cut(s)	215, 264, 1418
BsmI	GAATGC	3 cut(s)	214, 414, 604
BsnI	GGCC	6 cut(s)	47, 198, 395, 821, 991, 1327
Bsp1286I	GDGCHC	2 cut(s)	832, 1311
Bsp143I	GATC	5 cut(s)	91, 430, 484, 970, 1410
Bsp1720I	GCTNAGC	1 cut(s)	57
BspACI	CCGC	1 cut(s)	554
BspANI	GGCC	6 cut(s)	47, 198, 395, 821, 991, 1327
BspCNI	CTCAG	5 cut(s)	49, 383, 1024, 1226, 1495
BspLI	GGNNCC	4 cut(s)	280, 529, 709, 1245
BspMI	ACCTGC	1 cut(s)	1198
BspPI	GGATC	2 cut(s)	86, 438
BspQI	GCTCTTC	1 cut(s)	44
BspT107I	GGYRCC	2 cut(s)	707, 1243
BsrI	ACTGG	6 cut(s)	620, 792, 822, 841, 937, 1540
BssECI	CCNNGG	4 cut(s)	531, 888, 1003, 1073
BssMI	GATC	5 cut(s)	91, 430, 484, 970, 1410
BssNI	GRCGYC	1 cut(s)	921
BssT1I	CCWWGG	2 cut(s)	531, 1003
Bst2UI	CCWGG	3 cut(s)	53, 889, 1075
Bst4CI	ACNGT	5 cut(s)	161, 188, 635, 1302, 1579
Bst6I	CTCTTC	3 cut(s)	44, 294, 786
BstACI	GRCGYC	1 cut(s)	921
BstC8I	GCNNGC	2 cut(s)	66, 1195
BstDEI	CTNAG	7 cut(s)	57, 370, 925, 1032, 1213, 1482, 1556
BstF5I	GGATG	5 cut(s)	48, 266, 874, 933, 1099
BstH2I	RGCGCY	1 cut(s)	76
BstHHI	GCGC	4 cut(s)	30, 75, 224, 414
BstKTI	GATC	5 cut(s)	94, 433, 487, 973, 1413
BstMAI	GTCTC	1 cut(s)	1372
BstMBI	GATC	5 cut(s)	91, 430, 484, 970, 1410
BstNI	CCWGG	3 cut(s)	53, 889, 1075
BstNSI	RCATGY	1 cut(s)	594
BstSCI	CCNGG	5 cut(s)	51, 198, 887, 1073, 1401
BstSFI	CTRYAG	1 cut(s)	517
BstSLI	GKGCMC	1 cut(s)	832
BstV1I	GCAGC	2 cut(s)	73, 1049
BstX2I	RGATCY	1 cut(s)	1410
BstYI	RGATCY	1 cut(s)	1410
BsuI	GTATCC	1 cut(s)	758
BsuRI	GGCC	6 cut(s)	47, 198, 395, 821, 991, 1327
BtrI	CACGTC	1 cut(s)	1346
BtsCI	GGATG	5 cut(s)	48, 266, 874, 933, 1099
BtsIMutI	CAGTG	5 cut(s)	193, 829, 834, 1132, 1163
BveI	ACCTGC	1 cut(s)	1198
Cac8I	GCNNGC	2 cut(s)	66, 1195
CfoI	GCGC	4 cut(s)	30, 75, 224, 414
Cfr13I	GGNCC	5 cut(s)	278, 551, 1109, 1399, 1455
CseI	GACGC	1 cut(s)	910
Csp6I	GTAC	5 cut(s)	1000, 1044, 1472, 1495, 1550
CviAII	CATG	3 cut(s)	591, 1020, 1588
CviQI	GTAC	5 cut(s)	1000, 1044, 1472, 1495, 1550
DdeI	CTNAG	7 cut(s)	57, 370, 925, 1032, 1213, 1482, 1556
DpnI	GATC	5 cut(s)	93, 432, 486, 972, 1412
DpnII	GATC	5 cut(s)	91, 430, 484, 970, 1410
EaeI	YGGCCR	1 cut(s)	1325
Eam1104I	CTCTTC	3 cut(s)	44, 294, 786
EarI	CTCTTC	3 cut(s)	44, 294, 786
Eco130I	CCWWGG	2 cut(s)	531, 1003
Eco32I	GATATC	1 cut(s)	1123
Eco47I	GGWCC	5 cut(s)	278, 551, 1109, 1399, 1455
Eco57I	CTGAAG	2 cut(s)	188, 995
EcoRII	CCWGG	3 cut(s)	51, 887, 1073
EcoRV	GATATC	1 cut(s)	1123
EcoT14I	CCWWGG	2 cut(s)	531, 1003
EcoT22I	ATGCAT	2 cut(s)	1054, 1141
ErhI	CCWWGG	2 cut(s)	531, 1003
FaeI	CATG	3 cut(s)	594, 1023, 1591
FalI	AAGNNNNNCTT	2 cut(s)	908, 940
FaqI	GGGAC	3 cut(s)	215, 264, 1418
FatI	CATG	3 cut(s)	590, 1019, 1587
FblI	GTMKAC	2 cut(s)	516, 945
Fnu4HI	GCNGC	2 cut(s)	62, 1038
FokI	GGATG	5 cut(s)	35, 273, 881, 920, 1106
Fsp4HI	GCNGC	2 cut(s)	62, 1038
FspBI	CTAG	2 cut(s)	219, 291
GlaI	GCGC	4 cut(s)	29, 74, 223, 413
GluI	GCNGC	2 cut(s)	62, 1038
GsaI	CCCAGC	2 cut(s)	73, 1384
GsuI	CTGGAG	1 cut(s)	637
HaeII	RGCGCY	1 cut(s)	76
HaeIII	GGCC	6 cut(s)	47, 198, 395, 821, 991, 1327
HapII	CCGG	4 cut(s)	116, 199, 811, 1402
HgaI	GACGC	1 cut(s)	910
HhaI	GCGC	4 cut(s)	30, 75, 224, 414
Hin1I	GRCGYC	1 cut(s)	921
Hin1II	CATG	3 cut(s)	594, 1023, 1591
Hin6I	GCGC	4 cut(s)	28, 73, 222, 412
HinP1I	GCGC	4 cut(s)	28, 73, 222, 412
HincII	GTYRAC	1 cut(s)	1441
HindII	GTYRAC	1 cut(s)	1441
HindIII	AAGCTT	3 cut(s)	640, 725, 1626
HinfI	GANTC	7 cut(s)	368, 462, 513, 745, 858, 893, 1571
HpaI	GTTAAC	1 cut(s)	1441
HpaII	CCGG	4 cut(s)	116, 199, 811, 1402
HphI	GGTGA	6 cut(s)	139, 167, 341, 1235, 1529, 1555
Hpy166II	GTNNAC	8 cut(s)	177, 266, 517, 551, 830, 946, 1343, 1441
Hpy188I	TCNGA	9 cut(s)	91, 236, 373, 454, 512, 975, 1135, 1372, 1485
Hpy188III	TCNNGA	3 cut(s)	100, 671, 853
Hpy8I	GTNNAC	8 cut(s)	177, 266, 517, 551, 830, 946, 1343, 1441
HpyAV	CCTTC	4 cut(s)	118, 124, 188, 1223
HpyCH4III	ACNGT	5 cut(s)	161, 188, 635, 1302, 1579
HpyCH4IV	ACGT	1 cut(s)	1345
HpyCH4V	TGCA	8 cut(s)	273, 590, 808, 830, 1052, 1100, 1139, 1163
HpyF3I	CTNAG	7 cut(s)	57, 370, 925, 1032, 1213, 1482, 1556
HpySE526I	ACGT	1 cut(s)	1345
Hsp92I	GRCGYC	1 cut(s)	921
Hsp92II	CATG	3 cut(s)	594, 1023, 1591
HspAI	GCGC	4 cut(s)	28, 73, 222, 412
KspAI	GTTAAC	1 cut(s)	1441
Kzo9I	GATC	5 cut(s)	91, 430, 484, 970, 1410
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	2 cut(s)	533, 1306
Lsp1109I	GCAGC	2 cut(s)	73, 1049
LweI	GCATC	5 cut(s)	39, 307, 862, 1039, 1126
MaeI	CTAG	2 cut(s)	219, 291
MaeII	ACGT	1 cut(s)	1345
MaeIII	GTNAC	2 cut(s)	155, 894
MalI	GATC	5 cut(s)	93, 432, 486, 972, 1412
MboI	GATC	5 cut(s)	91, 430, 484, 970, 1410
MboII	GAAGA	7 cut(s)	31, 311, 479, 597, 685, 773, 1238
MfeI	CAATTG	1 cut(s)	1353
MflI	RGATCY	1 cut(s)	1410
MhlI	GDGCHC	2 cut(s)	832, 1311
MluCI	AATT	7 cut(s)	18, 363, 444, 714, 843, 1353, 1509
MlyI	GAGTC	3 cut(s)	362, 522, 902
MmeI	TCCRAC	1 cut(s)	1284
Mph1103I	ATGCAT	2 cut(s)	1054, 1141
MroXI	GAANNNNTTC	2 cut(s)	173, 1629
MseI	TTAA	6 cut(s)	390, 842, 915, 1055, 1142, 1440
MslI	CAYNNNNRTG	2 cut(s)	589, 813
MspA1I	CMGCKG	1 cut(s)	494
MspI	CCGG	4 cut(s)	116, 199, 811, 1402
MspR9I	CCNGG	5 cut(s)	53, 200, 889, 1075, 1403
MunI	CAATTG	1 cut(s)	1353
Mva1269I	GAATGC	3 cut(s)	214, 414, 604
MvaI	CCWGG	3 cut(s)	53, 889, 1075
NciI	CCSGG	2 cut(s)	200, 1403
NdeII	GATC	5 cut(s)	91, 430, 484, 970, 1410
NlaIII	CATG	3 cut(s)	594, 1023, 1591
NlaIV	GGNNCC	4 cut(s)	280, 529, 709, 1245
NmuCI	GTSAC	2 cut(s)	155, 894
NsiI	ATGCAT	2 cut(s)	1054, 1141
NspI	RCATGY	1 cut(s)	594
PciSI	GCTCTTC	1 cut(s)	44
PctI	GAATGC	3 cut(s)	214, 414, 604
PdmI	GAANNNNTTC	2 cut(s)	173, 1629
PfeI	GAWTC	4 cut(s)	462, 745, 858, 1571
PfoI	TCCNGGA	1 cut(s)	1401
PkrI	GCNGC	2 cut(s)	63, 1039
PleI	GAGTC	3 cut(s)	362, 521, 901
PpsI	GAGTC	3 cut(s)	362, 521, 901
PshBI	ATTAAT	1 cut(s)	842
PsiI	TTATAA	2 cut(s)	720, 740
Psp6I	CCWGG	3 cut(s)	51, 887, 1073
PspFI	CCCAGC	2 cut(s)	69, 1380
PspGI	CCWGG	3 cut(s)	51, 887, 1073
PspN4I	GGNNCC	4 cut(s)	280, 529, 709, 1245
PspPI	GGNCC	5 cut(s)	278, 551, 1109, 1399, 1455
PsuI	RGATCY	1 cut(s)	1410
PvuII	CAGCTG	1 cut(s)	494
RsaI	GTAC	5 cut(s)	1001, 1045, 1473, 1496, 1551
RsaNI	GTAC	5 cut(s)	1000, 1044, 1472, 1495, 1550
RseI	CAYNNNNRTG	2 cut(s)	589, 813
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	6 cut(s)	390, 842, 915, 1055, 1142, 1440
SatI	GCNGC	2 cut(s)	62, 1038
Sau3AI	GATC	5 cut(s)	91, 430, 484, 970, 1410
Sau96I	GGNCC	5 cut(s)	278, 551, 1109, 1399, 1455
SchI	GAGTC	3 cut(s)	362, 522, 902
ScrFI	CCNGG	5 cut(s)	53, 200, 889, 1075, 1403
SduI	GDGCHC	2 cut(s)	832, 1311
SfaNI	GCATC	5 cut(s)	39, 307, 862, 1039, 1126
SfcI	CTRYAG	1 cut(s)	517
SinI	GGWCC	5 cut(s)	278, 551, 1109, 1399, 1455
SmiMI	CAYNNNNRTG	2 cut(s)	589, 813
SmlI	CTYRAG	1 cut(s)	245
SmoI	CTYRAG	1 cut(s)	245
SpeI	ACTAGT	1 cut(s)	290
Sse9I	AATT	7 cut(s)	18, 363, 444, 714, 843, 1353, 1509
SsiI	CCGC	1 cut(s)	554
SspI	AATATT	1 cut(s)	111
SspMI	CTAG	2 cut(s)	219, 291
StyD4I	CCNGG	5 cut(s)	51, 198, 887, 1073, 1401
StyI	CCWWGG	2 cut(s)	531, 1003
TaaI	ACNGT	5 cut(s)	161, 188, 635, 1302, 1579
TaiI	ACGT	1 cut(s)	1348
TaqI	TCGA	3 cut(s)	42, 784, 1281
TasI	AATT	7 cut(s)	18, 363, 444, 714, 843, 1353, 1509
TatI	WGTACW	1 cut(s)	1494
TfiI	GAWTC	4 cut(s)	462, 745, 858, 1571
Tru1I	TTAA	6 cut(s)	390, 842, 915, 1055, 1142, 1440
Tru9I	TTAA	6 cut(s)	390, 842, 915, 1055, 1142, 1440
TscAI	CASTG	5 cut(s)	193, 829, 841, 1132, 1163
TseFI	GTSAC	2 cut(s)	155, 894
TseI	GCWGC	2 cut(s)	61, 1037
Tsp45I	GTSAC	2 cut(s)	155, 894
TspDTI	ATGAA	5 cut(s)	207, 363, 922, 924, 1622
TspRI	CASTG	5 cut(s)	193, 829, 841, 1132, 1163
VneI	GTGCAC	1 cut(s)	828
VpaK11BI	GGWCC	5 cut(s)	278, 551, 1109, 1399, 1455
VspI	ATTAAT	1 cut(s)	842
XapI	RAATTY	1 cut(s)	444
XceI	RCATGY	1 cut(s)	594
XmiI	GTMKAC	2 cut(s)	516, 945
XmnI	GAANNNNTTC	2 cut(s)	173, 1629
XspI	CTAG	2 cut(s)	219, 291
Zsp2I	ATGCAT	2 cut(s)	1054, 1141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.