Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002636.1

Orthogroup ID

OG0001448

Physical Location & Seq

Genomic Coordinates Forward (+)

106476 .. 112831

Gene Structure 6356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002636.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

atgctgcaatgctctaaaacctggatatcaacagcagccgctttctcattttctcttctccgccgtaactctccctcattctccactttgactccgccgccgtaccggaaagacttctctttctccctcctacaaccaccgccggccgccgccatggtgccccaccccaaagacgacgcttacctcgatagcgtaattcccaagcgaatccagctcttcgaggccatccaggctcagcagctcgcccaccgccagtccctcccttccgatccaatcaagattacgttgcccgacgggaaggtgaaggaggggaagacgtgggtgacttcgcccttcgacgttgcgaaggagatttcgaagagcttggcgtcgaatgccttgatttctgaggtcaatggggtactgtgggacatgagcaggcctttggagggtgactgtgagctcaagctcttcacatttgacaatgatgaaggcagggacactttctggcattctagcgcaatcaagattacgttgcccgacgggaaggtgaaggaggggaagacgtgggtgacttcgcccttcgacgttgcgaaggagatttcgaagagcttggcgtcgaatgccttgatttctgaggtcaatggggtactgtgggacatgagtaggcctttggagggtgactgtgagctcaagctcttcacatttgacaatgatgaaggcagggacactttctggcattctagcgcgcacattctcggacaggcacttgaggttgagtacggatgcaagttgtgtatcggtccctgcaccaccagaggagagggtttctattatgatgcattttatggtgatttggggttgaacgaggatcacttcaagcaaattgaatcaggagcagataaggctgttaaggccaaacagccatttgagcgcattgaagtaacaagggatcaggcgcttgagattttttctgataacagattcaaggttgaaatcatcaatgatcttcctgctgacaaaactatcaccgtctacagatgtggccccttggttgacttgtgtcgtggaccgcacataccaaacacatcatttgtcaaagcattggcgtgtttgaaggcttcttctgcctactggagaggaaataaagatcgtgaaagcttacagagagtttatggaatatcttatcctgataagaaaagtttgcagttatatctcaagcgtctggaagaagcaaaaaaatatgatcatagattgttaggtacaaagcaggagctgttctttaatcacccacttagtccaggaagttggttcttcctgcccaatggcacccggatttataacaagctcatggagtttataaaaaatcaatacagagagagaggataccaagaggttatatcgccaaacatgtacaatatgcaactttgggaaacatctggtcatgctgcaaattacaaggagaatatgtttgtctttgagattgagaaacaggagtttggattgaagccaatgaattgtccggggcattgtttaatgtttcagcacagagttcgttcttatagagagcttcctcttcgactggctgactttggggttttgcaccggaatgaggccagtggtgcactcactggattaactcgtgtcaggagattccagcaggatgatgctcatatcttttgcagggagtcacaaataaaagatgaagttacgggcgtcttagacttcatccaatatacctacgatatatttggcttcacttttgatctgccagaaaagtaccttggagagatagaaacatgggagaaagctgagtcagctcttacagaagcattaaatgagtttggcaaaccctggcagataaatgaaggggatggtgcattttacggaccaaagatagatatcagtgtatctgatgcattgaacaggaagtttcagtgtgcaacattacagcttgattttcagctacctgctcgctttgagctgtattactcagcagagggtgaagaaggcaagagggaggcacctgttatgatacacagagccattttgggttctgttgagcgtatgtttgctatactgttggagcactacaaggggaaatggccattctggcttagtccacgtcaggcaattgtttgccctgtctcggacaaatcccagccctatgctcagcaggtacgggacaagatctttcaggctggttattttgttgatgttgacacaagtgataggacaatacagaaaaaggtacgagaagctcagatggcacagtacaactacattctagttgttggtgaggaggaagtcaaaactggacaggtgagcgtacgggttagagataaggcagattccaacgtaatgagcatggatagcctactcaaacactttaaggaggaagttgaagctttccactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005886 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0030312 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071944 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon TGS tRNA-synt_2b tRNA_SAD

Protein Analysis

798

Amino Acids

91.3

Weight (kDa)

5.99

Isoelectric Point (pI)

39.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001448)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18130 AT5G26830
fragaria_vesca	FvH4_3g11970 FvH4_4g07680 FvH4_4g07680 FvH4_4g07680 FvH4_4g07690 FvH4_4g07690 FvH4_6g47820
malus_domestica	MD13G1089000.v1.1 MD16G1089100.v1.1
prunus_persica	Prupe.1G256800_v2.0.a1 Prupe.7G261600_v2.0.a1 Prupe.8G070800_v2.0.a1 Prupe.8G074400_v2.0.a1 Prupe.8G074400_v2.0.a1
pyrus_communis	pycom13g07710 pycom16g07630
rosa_chinensis	RchiOBHm_Chr4g0400731 RchiOBHm_Chr4g0444241 RchiOBHm_Chr5g0019561 RchiOBHm_Chr5g0019571 RchiOBHm_Chr5g0025481
rosa_laevigata	RLG00000005338 RLG00000008608 RLG00000009182 RLG00000032456
rosa_multiflora	Rmu_sc0002636.1_g000026 Rmu_sc0002759.1_g000056
rosa_roxburghii	Rroxscaffold_155G00443880 Rroxscaffold_1G00058510 Rroxscaffold_3G00273610 Rroxscaffold_5G00345580
rosa_rugosa	Rorug04G0025500 Rorug04G0093800 Rorug05G0052000 Rorug06G0426500
rosa_samantha	Rh4AG103300 Rh4AG411800 Rh4CG111600 Rh4DG095200 Rh5AG142600 Rh5BG141100 Rh5CG153100 Rh5CG153200 Rh5DG141700 Rh5DG141800 Rh7CG027000 Rh7CG027200 Rh7DG026700
rosa_wichuraiana	Rw4G008360 Rw5G012620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1320, 1340
Acc36I	ACCTGC	2 cut(s)	1957, 2146
AccB1I	GGYRCC	3 cut(s)	157, 1307, 2002
AccI	GTMKAC	1 cut(s)	1014
AccII	CGCG	1 cut(s)	728
AciI	CCGC	9 cut(s)	39, 61, 95, 98, 140, 147, 150, 250, 1052
AclWI	GGATC	3 cut(s)	263, 858, 939
AcoI	YGGCCR	2 cut(s)	144, 2084
AcyI	GRCGYC	3 cut(s)	368, 596, 1695
AfiI	CCNNNNNNNGG	4 cut(s)	428, 656, 1591, 2128
AflIII	ACRYGT	1 cut(s)	1389
AjiI	CACGTC	3 cut(s)	318, 546, 2105
AjnI	CCWGG	4 cut(s)	20, 228, 1279, 1832
AjuI	GAANNNNNNNTTGG	2 cut(s)	1746, 1778
Alw21I	GWGCWC	4 cut(s)	444, 672, 1606, 2070
Alw26I	GTCTC	1 cut(s)	2131
Alw44I	GTGCAC	1 cut(s)	1602
AlwI	GGATC	3 cut(s)	263, 858, 939
AlwNI	CAGNNNCTG	1 cut(s)	1255
AoxI	GGCC	8 cut(s)	144, 222, 419, 647, 894, 1024, 1593, 2084
ApaLI	GTGCAC	1 cut(s)	1602
ApeKI	GCWGC	4 cut(s)	4, 35, 238, 1427
Asp700I	GAANNNNTTC	1 cut(s)	113
AspLEI	GCGC	5 cut(s)	500, 728, 730, 915, 940
AspS9I	GGNCC	4 cut(s)	782, 1025, 1049, 1868
AsuC2I	CCSGG	2 cut(s)	1312, 1503
AsuII	TTCGAA	2 cut(s)	356, 584
AvaII	GGWCC	3 cut(s)	782, 1049, 1868
BaeGI	GKGCMC	2 cut(s)	162, 1606
BalI	TGGCCA	1 cut(s)	2086
BanI	GGYRCC	3 cut(s)	157, 1307, 2002
BanII	GRGCYC	2 cut(s)	444, 672
BauI	CACGAG	1 cut(s)	1620
BbsI	GAAGAC	2 cut(s)	320, 548
Bbv12I	GWGCWC	4 cut(s)	444, 672, 1606, 2070
BbvI	GCAGC	3 cut(s)	47, 250, 1414
BccI	CCATC	3 cut(s)	233, 1847, 2239
BceAI	ACGGC	2 cut(s)	48, 85
BcgI	CGANNNNNNTGC	2 cut(s)	1514, 1548
BciT130I	CCWGG	4 cut(s)	22, 230, 1281, 1834
BciVI	GTATCC	1 cut(s)	1358
BclI	TGATCA	1 cut(s)	1225
BcnI	CCSGG	2 cut(s)	1312, 1503
BcoDI	GTCTC	1 cut(s)	2131
BfaI	CTAG	4 cut(s)	495, 723, 2267, 2395
BfmI	CTRYAG	1 cut(s)	1015
BfoI	RGCGCY	1 cut(s)	941
BfuAI	ACCTGC	2 cut(s)	1957, 2146
BfuI	GTATCC	1 cut(s)	1358
BglI	GCCNNNNNGGC	2 cut(s)	230, 2092
BglII	AGATCT	1 cut(s)	2169
BisI	GCNGC	8 cut(s)	5, 36, 39, 98, 147, 150, 239, 1428
BlpI	GCTNAGC	2 cut(s)	234, 2151
BlsI	GCNGC	8 cut(s)	6, 37, 40, 99, 148, 151, 240, 1429
Bme1390I	CCNGG	6 cut(s)	22, 230, 1281, 1312, 1503, 1834
Bme18I	GGWCC	3 cut(s)	782, 1049, 1868
BmgBI	CACGTC	3 cut(s)	318, 546, 2105
BmgT120I	GGNCC	4 cut(s)	782, 1025, 1049, 1868
BmiI	GGNNCC	5 cut(s)	159, 784, 1027, 1309, 2004
BmrFI	CCNGG	6 cut(s)	22, 230, 1281, 1312, 1503, 1834
BmsI	GCATC	4 cut(s)	755, 808, 1636, 1885
BoxI	GACNNNNGTC	1 cut(s)	1041
BpiI	GAAGAC	2 cut(s)	320, 548
BpmI	CTGGAG	1 cut(s)	1135
Bpu1102I	GCTNAGC	2 cut(s)	234, 2151
Bpu14I	TTCGAA	2 cut(s)	356, 584
BpuEI	CTTGAG	5 cut(s)	428, 656, 770, 962, 1181
BpuMI	CCSGG	2 cut(s)	1312, 1503
BsaBI	GATNNNNATC	1 cut(s)	1880
BsaHI	GRCGYC	3 cut(s)	368, 596, 1695
BsaJI	CCNNGG	5 cut(s)	153, 1029, 1502, 1762, 1832
BsaWI	WCCGGW	2 cut(s)	105, 1584
BsaXI	ACNNNNNCTCC	4 cut(s)	76, 106, 1433, 1463
Bsc4I	CCNNNNNNNGG	4 cut(s)	428, 656, 1591, 2128
Bse118I	RCCGGY	1 cut(s)	142
Bse1I	ACTGG	6 cut(s)	253, 1118, 1566, 1596, 1615, 2299
Bse3DI	GCAATG	1 cut(s)	14
Bse8I	GATNNNNATC	1 cut(s)	1880
BseBI	CCWGG	4 cut(s)	22, 230, 1281, 1834
BseDI	CCNNGG	5 cut(s)	153, 1029, 1502, 1762, 1832
BseGI	GGATG	5 cut(s)	225, 770, 1648, 1707, 1858
BseJI	GATNNNNATC	1 cut(s)	1880
BseLI	CCNNNNNNNGG	4 cut(s)	428, 656, 1591, 2128
BseMI	GCAATG	1 cut(s)	14
BseMII	CTCAG	7 cut(s)	248, 378, 606, 1782, 1986, 2165, 2255
BseNI	ACTGG	6 cut(s)	253, 1118, 1566, 1596, 1615, 2299
BsePI	GCGCGC	1 cut(s)	726
BseRI	GAGGAG	2 cut(s)	813, 2294
BseSI	GKGCMC	2 cut(s)	162, 1606
BseX3I	CGGCCG	1 cut(s)	144
BseXI	GCAGC	3 cut(s)	47, 250, 1414
BseYI	CCCAGC	1 cut(s)	2139
BsgI	GTGCAG	1 cut(s)	772
Bsh1236I	CGCG	1 cut(s)	728
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	8 cut(s)	146, 224, 421, 649, 896, 1026, 1595, 2086
BshNI	GGYRCC	3 cut(s)	157, 1307, 2002
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	4 cut(s)	444, 672, 1606, 2070
BsiSI	CCGG	5 cut(s)	106, 143, 1312, 1502, 1585
BsiWI	CGTACG	1 cut(s)	2308
BslFI	GGGAC	7 cut(s)	241, 422, 491, 650, 719, 768, 2177
BslI	CCNNNNNNNGG	4 cut(s)	428, 656, 1591, 2128
BsmAI	GTCTC	1 cut(s)	2131
BsmFI	GGGAC	7 cut(s)	241, 422, 491, 650, 719, 768, 2177
BsmI	GAATGC	4 cut(s)	379, 490, 607, 718
BsnI	GGCC	8 cut(s)	146, 224, 421, 649, 896, 1026, 1595, 2086
Bsp119I	TTCGAA	2 cut(s)	356, 584
Bsp1286I	GDGCHC	5 cut(s)	162, 444, 672, 1606, 2070
Bsp1407I	TGTACA	1 cut(s)	1392
Bsp143I	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
Bsp1720I	GCTNAGC	2 cut(s)	234, 2151
Bsp19I	CCATGG	1 cut(s)	153
BspACI	CCGC	9 cut(s)	39, 61, 95, 98, 140, 147, 150, 250, 1052
BspANI	GGCC	8 cut(s)	146, 224, 421, 649, 896, 1026, 1595, 2086
BspCNI	CTCAG	7 cut(s)	247, 379, 607, 1783, 1985, 2164, 2254
BspFNI	CGCG	1 cut(s)	728
BspLI	GGNNCC	5 cut(s)	159, 784, 1027, 1309, 2004
BspMI	ACCTGC	2 cut(s)	1957, 2146
BspPI	GGATC	3 cut(s)	263, 858, 939
BspQI	GCTCTTC	5 cut(s)	221, 353, 455, 581, 683
BspT104I	TTCGAA	2 cut(s)	356, 584
BspT107I	GGYRCC	3 cut(s)	157, 1307, 2002
BsrDI	GCAATG	1 cut(s)	14
BsrFI	RCCGGY	1 cut(s)	142
BsrGI	TGTACA	1 cut(s)	1392
BsrI	ACTGG	6 cut(s)	253, 1118, 1566, 1596, 1615, 2299
BssAI	RCCGGY	1 cut(s)	142
BssECI	CCNNGG	5 cut(s)	153, 1029, 1502, 1762, 1832
BssHII	GCGCGC	1 cut(s)	726
BssMI	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
BssNI	GRCGYC	3 cut(s)	368, 596, 1695
BssSI	CACGAG	1 cut(s)	1620
BssT1I	CCWWGG	3 cut(s)	153, 1029, 1762
Bst2BI	CACGAG	1 cut(s)	1620
Bst2UI	CCWGG	4 cut(s)	22, 230, 1281, 1834
Bst4CI	ACNGT	7 cut(s)	405, 437, 633, 665, 1012, 2061, 2253
Bst6I	CTCTTC	7 cut(s)	60, 221, 353, 455, 581, 683, 1560
BstACI	GRCGYC	3 cut(s)	368, 596, 1695
BstAUI	TGTACA	1 cut(s)	1392
BstBI	TTCGAA	2 cut(s)	356, 584
BstC8I	GCNNGC	5 cut(s)	144, 243, 419, 728, 1954
BstDSI	CCRYGG	1 cut(s)	153
BstF5I	GGATG	5 cut(s)	225, 770, 1648, 1707, 1858
BstFNI	CGCG	1 cut(s)	728
BstH2I	RGCGCY	1 cut(s)	941
BstHHI	GCGC	5 cut(s)	500, 728, 730, 915, 940
BstKTI	GATC	8 cut(s)	271, 853, 934, 988, 1132, 1228, 1747, 2172
BstMAI	GTCTC	1 cut(s)	2131
BstMBI	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
BstMCI	CGRYCG	1 cut(s)	147
BstNI	CCWGG	4 cut(s)	22, 230, 1281, 1834
BstNSI	RCATGY	1 cut(s)	1393
BstPAI	GACNNNNGTC	1 cut(s)	1041
BstSCI	CCNGG	6 cut(s)	20, 228, 1279, 1310, 1501, 1832
BstSFI	CTRYAG	1 cut(s)	1015
BstSLI	GKGCMC	2 cut(s)	162, 1606
BstUI	CGCG	1 cut(s)	728
BstV1I	GCAGC	3 cut(s)	47, 250, 1414
BstV2I	GAAGAC	2 cut(s)	320, 548
BstX2I	RGATCY	1 cut(s)	2169
BstXI	CCANNNNNNTGG	1 cut(s)	1287
BstYI	RGATCY	1 cut(s)	2169
BstZI	CGGCCG	1 cut(s)	144
BsuI	GTATCC	1 cut(s)	1358
BsuRI	GGCC	8 cut(s)	146, 224, 421, 649, 896, 1026, 1595, 2086
BtgI	CCRYGG	1 cut(s)	153
BtrI	CACGTC	3 cut(s)	318, 546, 2105
BtsCI	GGATG	5 cut(s)	225, 770, 1648, 1707, 1858
BtsIMutI	CAGTG	4 cut(s)	1603, 1608, 1891, 1922
BveI	ACCTGC	2 cut(s)	1957, 2146
Cac8I	GCNNGC	5 cut(s)	144, 243, 419, 728, 1954
CaiI	CAGNNNCTG	1 cut(s)	1255
CfoI	GCGC	5 cut(s)	500, 728, 730, 915, 940
Cfr10I	RCCGGY	1 cut(s)	142
Cfr13I	GGNCC	4 cut(s)	782, 1025, 1049, 1868
CseI	GACGC	5 cut(s)	185, 357, 585, 1190, 1684
CviAII	CATG	8 cut(s)	154, 412, 640, 1330, 1390, 1424, 1779, 2347
DpnI	GATC	8 cut(s)	270, 852, 933, 987, 1131, 1227, 1746, 2171
DpnII	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
EaeI	YGGCCR	2 cut(s)	144, 2084
EagI	CGGCCG	1 cut(s)	144
Eam1104I	CTCTTC	7 cut(s)	60, 221, 353, 455, 581, 683, 1560
EarI	CTCTTC	7 cut(s)	60, 221, 353, 455, 581, 683, 1560
EciI	GGCGGA	2 cut(s)	50, 84
Ecl136II	GAGCTC	2 cut(s)	442, 670
EclXI	CGGCCG	1 cut(s)	144
Eco130I	CCWWGG	3 cut(s)	153, 1029, 1762
Eco147I	AGGCCT	2 cut(s)	421, 649
Eco24I	GRGCYC	2 cut(s)	444, 672
Eco32I	GATATC	2 cut(s)	27, 1882
Eco47I	GGWCC	3 cut(s)	782, 1049, 1868
Eco52I	CGGCCG	1 cut(s)	144
Eco53kI	GAGCTC	2 cut(s)	442, 670
EcoICRI	GAGCTC	2 cut(s)	442, 670
EcoRII	CCWGG	4 cut(s)	20, 228, 1279, 1832
EcoRV	GATATC	2 cut(s)	27, 1882
EcoT14I	CCWWGG	3 cut(s)	153, 1029, 1762
EcoT22I	ATGCAT	2 cut(s)	823, 1900
EcoT38I	GRGCYC	2 cut(s)	444, 672
ErhI	CCWWGG	3 cut(s)	153, 1029, 1762
FaeI	CATG	8 cut(s)	157, 415, 643, 1333, 1393, 1427, 1782, 2350
FaqI	GGGAC	7 cut(s)	241, 422, 491, 650, 719, 768, 2177
FatI	CATG	8 cut(s)	153, 411, 639, 1329, 1389, 1423, 1778, 2346
FbaI	TGATCA	1 cut(s)	1225
FblI	GTMKAC	1 cut(s)	1014
Fnu4HI	GCNGC	8 cut(s)	5, 36, 39, 98, 147, 150, 239, 1428
FokI	GGATG	5 cut(s)	212, 777, 1655, 1694, 1865
FriOI	GRGCYC	2 cut(s)	444, 672
Fsp4HI	GCNGC	8 cut(s)	5, 36, 39, 98, 147, 150, 239, 1428
FspBI	CTAG	4 cut(s)	495, 723, 2267, 2395
GlaI	GCGC	5 cut(s)	499, 727, 729, 914, 939
GluI	GCNGC	8 cut(s)	5, 36, 39, 98, 147, 150, 239, 1428
GsaI	CCCAGC	1 cut(s)	2143
GsuI	CTGGAG	1 cut(s)	1135
HaeII	RGCGCY	1 cut(s)	941
HaeIII	GGCC	8 cut(s)	146, 224, 421, 649, 896, 1026, 1595, 2086
HapII	CCGG	5 cut(s)	106, 143, 1312, 1502, 1585
HgaI	GACGC	5 cut(s)	185, 357, 585, 1190, 1684
HhaI	GCGC	5 cut(s)	500, 728, 730, 915, 940
Hin1I	GRCGYC	3 cut(s)	368, 596, 1695
Hin1II	CATG	8 cut(s)	157, 415, 643, 1333, 1393, 1427, 1782, 2350
Hin6I	GCGC	5 cut(s)	498, 726, 728, 913, 938
HinP1I	GCGC	5 cut(s)	498, 726, 728, 913, 938
HincII	GTYRAC	2 cut(s)	1036, 2200
HindII	GTYRAC	2 cut(s)	1036, 2200
HindIII	AAGCTT	2 cut(s)	1138, 2385
HinfI	GANTC	8 cut(s)	91, 207, 869, 963, 1632, 1667, 1793, 2330
HpaII	CCGG	5 cut(s)	106, 143, 1312, 1502, 1585
Hpy166II	GTNNAC	6 cut(s)	1015, 1036, 1049, 1604, 2102, 2200
Hpy188I	TCNGA	8 cut(s)	268, 388, 616, 740, 955, 1894, 2131, 2244
Hpy188III	TCNNGA	7 cut(s)	277, 505, 873, 1133, 1169, 1205, 1627
Hpy8I	GTNNAC	6 cut(s)	1015, 1036, 1049, 1604, 2102, 2200
Hpy99I	CGWCG	7 cut(s)	179, 296, 341, 373, 524, 569, 601
HpyCH4III	ACNGT	7 cut(s)	405, 437, 633, 665, 1012, 2061, 2253
HpyCH4IV	ACGT	8 cut(s)	284, 317, 339, 512, 545, 567, 2104, 2337
HpySE526I	ACGT	8 cut(s)	284, 317, 339, 512, 545, 567, 2104, 2337
Hsp92I	GRCGYC	3 cut(s)	368, 596, 1695
Hsp92II	CATG	8 cut(s)	157, 415, 643, 1333, 1393, 1427, 1782, 2350
HspAI	GCGC	5 cut(s)	498, 726, 728, 913, 938
KroI	GCCGGC	1 cut(s)	142
KroNI	GCCGGC	1 cut(s)	144
Ksp22I	TGATCA	1 cut(s)	1225
Kzo9I	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
LguI	GCTCTTC	5 cut(s)	221, 353, 455, 581, 683
LmnI	GCTCC	3 cut(s)	875, 1252, 2065
Lsp1109I	GCAGC	3 cut(s)	47, 250, 1414
LweI	GCATC	4 cut(s)	755, 808, 1636, 1885
MaeI	CTAG	4 cut(s)	495, 723, 2267, 2395
MaeII	ACGT	8 cut(s)	284, 317, 339, 512, 545, 567, 2104, 2337
MaeIII	GTNAC	8 cut(s)	65, 322, 431, 550, 659, 922, 1668, 1687
MalI	GATC	8 cut(s)	270, 852, 933, 987, 1131, 1227, 1746, 2171
MboI	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
MfeI	CAATTG	1 cut(s)	2112
MflI	RGATCY	1 cut(s)	2169
MhlI	GDGCHC	5 cut(s)	162, 444, 672, 1606, 2070
MlsI	TGGCCA	1 cut(s)	2086
MluCI	AATT	5 cut(s)	195, 864, 1432, 1495, 2112
MluNI	TGGCCA	1 cut(s)	2086
MlyI	GAGTC	3 cut(s)	85, 1676, 1802
MmeI	TCCRAC	2 cut(s)	2043, 2358
Mox20I	TGGCCA	1 cut(s)	2086
Mph1103I	ATGCAT	2 cut(s)	823, 1900
MroNI	GCCGGC	1 cut(s)	142
MroXI	GAANNNNTTC	1 cut(s)	113
MscI	TGGCCA	1 cut(s)	2086
MseI	TTAA	6 cut(s)	891, 1263, 1514, 1616, 1814, 2370
MslI	CAYNNNNRTG	2 cut(s)	1087, 1587
Msp20I	TGGCCA	1 cut(s)	2086
MspI	CCGG	5 cut(s)	106, 143, 1312, 1502, 1585
MspR9I	CCNGG	6 cut(s)	22, 230, 1281, 1312, 1503, 1834
MunI	CAATTG	1 cut(s)	2112
Mva1269I	GAATGC	4 cut(s)	379, 490, 607, 718
MvaI	CCWGG	4 cut(s)	22, 230, 1281, 1834
MvnI	CGCG	1 cut(s)	728
NaeI	GCCGGC	1 cut(s)	144
NciI	CCSGG	2 cut(s)	1312, 1503
NcoI	CCATGG	1 cut(s)	153
NdeII	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
NgoMIV	GCCGGC	1 cut(s)	142
NlaIII	CATG	8 cut(s)	157, 415, 643, 1333, 1393, 1427, 1782, 2350
NlaIV	GGNNCC	5 cut(s)	159, 784, 1027, 1309, 2004
NmuCI	GTSAC	5 cut(s)	322, 431, 550, 659, 1668
NsiI	ATGCAT	2 cut(s)	823, 1900
NspI	RCATGY	1 cut(s)	1393
NspV	TTCGAA	2 cut(s)	356, 584
PauI	GCGCGC	1 cut(s)	726
PceI	AGGCCT	2 cut(s)	421, 649
PciI	ACATGT	1 cut(s)	1389
PciSI	GCTCTTC	5 cut(s)	221, 353, 455, 581, 683
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	4 cut(s)	379, 490, 607, 718
PdiI	GCCGGC	1 cut(s)	144
PdmI	GAANNNNTTC	1 cut(s)	113
PfeI	GAWTC	5 cut(s)	207, 869, 963, 1632, 2330
Pfl23II	CGTACG	1 cut(s)	2308
PfoI	TCCNGGA	1 cut(s)	1279
PkrI	GCNGC	8 cut(s)	6, 37, 40, 99, 148, 151, 240, 1429
PleI	GAGTC	3 cut(s)	85, 1675, 1801
PpsI	GAGTC	3 cut(s)	85, 1675, 1801
PscI	ACATGT	1 cut(s)	1389
PshAI	GACNNNNGTC	1 cut(s)	1041
PsiI	TTATAA	2 cut(s)	1320, 1340
Psp124BI	GAGCTC	2 cut(s)	444, 672
Psp6I	CCWGG	4 cut(s)	20, 228, 1279, 1832
PspFI	CCCAGC	1 cut(s)	2139
PspGI	CCWGG	4 cut(s)	20, 228, 1279, 1832
PspLI	CGTACG	1 cut(s)	2308
PspN4I	GGNNCC	5 cut(s)	159, 784, 1027, 1309, 2004
PspPI	GGNCC	4 cut(s)	782, 1025, 1049, 1868
PstNI	CAGNNNCTG	1 cut(s)	1255
PsuI	RGATCY	1 cut(s)	2169
PteI	GCGCGC	1 cut(s)	726
RseI	CAYNNNNRTG	2 cut(s)	1087, 1587
SacI	GAGCTC	2 cut(s)	444, 672
SapI	GCTCTTC	5 cut(s)	221, 353, 455, 581, 683
SaqAI	TTAA	6 cut(s)	891, 1263, 1514, 1616, 1814, 2370
SatI	GCNGC	8 cut(s)	5, 36, 39, 98, 147, 150, 239, 1428
Sau3AI	GATC	8 cut(s)	268, 850, 931, 985, 1129, 1225, 1744, 2169
Sau96I	GGNCC	4 cut(s)	782, 1025, 1049, 1868
SchI	GAGTC	3 cut(s)	85, 1676, 1802
ScrFI	CCNGG	6 cut(s)	22, 230, 1281, 1312, 1503, 1834
SduI	GDGCHC	5 cut(s)	162, 444, 672, 1606, 2070
SfaNI	GCATC	4 cut(s)	755, 808, 1636, 1885
SfcI	CTRYAG	1 cut(s)	1015
SfuI	TTCGAA	2 cut(s)	356, 584
SinI	GGWCC	3 cut(s)	782, 1049, 1868
SmiMI	CAYNNNNRTG	2 cut(s)	1087, 1587
SmlI	CTYRAG	5 cut(s)	443, 671, 749, 941, 1196
SmoI	CTYRAG	5 cut(s)	443, 671, 749, 941, 1196
Sse9I	AATT	5 cut(s)	195, 864, 1432, 1495, 2112
SseBI	AGGCCT	2 cut(s)	421, 649
SsiI	CCGC	9 cut(s)	39, 61, 95, 98, 140, 147, 150, 250, 1052
SspMI	CTAG	4 cut(s)	495, 723, 2267, 2395
SstI	GAGCTC	2 cut(s)	444, 672
StuI	AGGCCT	2 cut(s)	421, 649
StyD4I	CCNGG	6 cut(s)	20, 228, 1279, 1310, 1501, 1832
StyI	CCWWGG	3 cut(s)	153, 1029, 1762
TaaI	ACNGT	7 cut(s)	405, 437, 633, 665, 1012, 2061, 2253
TaiI	ACGT	8 cut(s)	287, 320, 342, 515, 548, 570, 2107, 2340
TaqI	TCGA	9 cut(s)	186, 219, 336, 356, 371, 564, 584, 599, 1558
TaqII	GACCGA	1 cut(s)	770
TasI	AATT	5 cut(s)	195, 864, 1432, 1495, 2112
TatI	WGTACW	2 cut(s)	1392, 2253
TauI	GCSGC	4 cut(s)	41, 100, 149, 152
TfiI	GAWTC	5 cut(s)	207, 869, 963, 1632, 2330
Tru1I	TTAA	6 cut(s)	891, 1263, 1514, 1616, 1814, 2370
Tru9I	TTAA	6 cut(s)	891, 1263, 1514, 1616, 1814, 2370
TscAI	CASTG	4 cut(s)	1603, 1615, 1891, 1922
TseFI	GTSAC	5 cut(s)	322, 431, 550, 659, 1668
TseI	GCWGC	4 cut(s)	4, 35, 238, 1427
Tsp45I	GTSAC	5 cut(s)	322, 431, 550, 659, 1668
TspDTI	ATGAA	6 cut(s)	483, 711, 1508, 1696, 1698, 1860
TspGWI	ACGGA	2 cut(s)	777, 1881
TspRI	CASTG	4 cut(s)	1603, 1615, 1891, 1922
VneI	GTGCAC	1 cut(s)	1602
VpaK11BI	GGWCC	3 cut(s)	782, 1049, 1868
XceI	RCATGY	1 cut(s)	1393
XmiI	GTMKAC	1 cut(s)	1014
XmnI	GAANNNNTTC	1 cut(s)	113
XspI	CTAG	4 cut(s)	495, 723, 2267, 2395
Zsp2I	ATGCAT	2 cut(s)	823, 1900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.