FvH4_5g20740

SNF2 domain-containing protein CLASSY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0001072
Physical Location & Seq
Reverse (-)
12320754 .. 12325990
5237 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g20740.t1

Sequence Viewer

Length: 3216 bp
ATGTTTGACTATAGCTTGCCTATAGCTACTAGGACAAGGCAGAGGCATGACAAAGCTTACAAGGAGTTGTATGAGAAAAAGAAGAAGCAGGAGAAGGAAGTGGGCAGCTCAGCCCCCACTGATTTCAAGAAATCGGGGTCTGCATACATAGTTCTTTCGGATGATAGCATGGAGGAGGATTCAGAGGGTTTCAATTCGGATGAGGGAGTTGCAGAGGGAAGTGAGGAGGAAGTGGGAAAAAGGCGGAGTGTCGAGGGACGTACAAGGTCGGGATTGGATTTGTCAGCCGATTCTGTAGCTGATTTGGATGATAGTGGCAAAGAAAGTGTGAAAGTCATTAGTTTGGTTAGCGACAGTGATGATGAGGCAGTGTCAGTAAGTAAGCAGGGAGGTGGAGGAGACTCTGAAAGTGTTAAGGATAGTGATATGAGAAGTACTGATTCAGACGAGGAATTCCATGAGTACTCAATTGAGGATGATGAAGATGATACTGAAAGTATCTCTTCAGATGATTATGCAAGTGATTGTTCGAATGATGAGAGACCTCTAAATTCAGATTGTGAAACTGAGGATGCAAAGAGAAGTGGGGCAGAGGGAGAAAGAGCTGGTATATGTCAAAAAAGAAAGAGAAACATTAGAGGGGATGGTGATGGTCAAAAGTTCAATTGTGTAGCGCAACGTACTCGTTCACGGTCTGGAACTCATTCCTCCGGTGGCCATGATGATCAGAGGGATGTTTATGAAAATCAATGTAGTAGTCAGAGAAACAAGCGTCCTAAAATGAATTCACAGTGCAACAATAGACGAAGTGGTGACAATGATGAGACCTATTCTTTTAGTCTGATCAATGGGCATGATGCATTCAAAACATCTGAAAAGAGTGAAAGGCCGAGGAAGCTTACTAAGAAAAAGAGCACCAGGGAAAAAAGAGTTGCCAATGCTTACAACATTCTCGCAGATTCGATTTATGAAGATGAAGAACTACCCCCAGAAGGTTCAGCTTCCTTTGGGGGTAATGCCATTGAAAATGTAACTCTTCCTTTGAAGTTCTCATTTGGTAAGCTGCCAAGTATAGTTCCAGAAGAGAAGTCACATTTTGAGAAACAAGTAGATAGGCTTTTTGAAGAAATGGAATTTGCTATTAGATCTGCCCAGATTGGTTCTACTGACTGTAGTGAGGTTGGTACTAATGACTCAGTACCTCCAGCTAAGGAAGTTACTCAACACATGCTTTGTAGTCAAGGGGAACATTATCTTATACTTGATGAAGAAATTGGGATGATTTGCAAATATTGCCCTCATGTGCATCAGGAGATCAAGTATATTGTACCAGAATTTGCTCCAAACCCTTATGGCCGATCTGGCAAGAGATTCTATGAAGAAGACAACTGGTCTCTTCCTGATGAGCTGCAATGCCATGAATCTGGGTCTGTCTTTCCTTCCAGTGCTCATGTTGATGGCACAGTGTGGGACTTAATCCCTGGTGTTAAAAGTAGTATGTATCCTCATCAGTGTGAAGGTTTTGAATTTATTTGGAGTCATATAGCTGGTGGCATTCATCTTGAAAAGCTGCAAAAGACAAGTAGTGCTGATGGTGGGGGTGGTTGCATAATATCACATGCACCTGGAACAGGGAAGACACGTCTGACCATTGTCTTTCTTCAGGCATACATGAGATTTAACCCAAAATGCAGGCCACTTATAATTGCTCCTCGTACAATGCTTCTCACCTGGGAAGAGGAGTTTAAGAAATGGGGCTTTGATGTACCCTTTCACAATCTTAACAATCAGAGTTTATCGGGGAAGGAGAATAAAGCAGCCCTCGCGATTTTGGTGCAAGGTGGAGGTCAGCGGCATGTGAAAAGTGTGGACGGTAGTCGTTGGTTGAAGCTATATTCCTGGAACAAGGAAAGAAGCATCCTTGGAATCAGTTACAGACTTTTTGAGAAACTGTCTACTGCACATAATTCTGGAGGCAAGAAAGCTGACCTAGCTAAGAAAATGAGGAATATTCTATTAGACTTTCCCGGTATTGTAGTCTTTGATGAAGGGCATACACCTCGAAACGATAAGAGTCATATGTGGAAGGCTTCATCAAATATCAAAACACACAGACGTATTATTCTCTCAGGAACTCCTTTTCAAAACAATTTCGATGAGCTGTACAATACAATTGGCTTGGCAAGGCCAGACTGGATCATGCCTACATGCAGTGGACGAAGCCTAAAAAGAAATGTAGTGAAAGCACAACAGATGCCTCTGGCCAATGACATTGCCAAAGGTGATGGTGATAAAGCAAAAGAAGCCAAGAAAATAGGAGCTAGAATTGCGCCGATTGTGCATGTTTACAGAGGCTCCATACTACGTGATACACTTCCTGGGTTGAGGAACTCAGTTGTTGTTTTACAGCCAAGCAAGTTACAGAAAGAAATTTCAGCGAGAATTCAAGAGAAAAATGATCTTCCATTCTTTAAAGATGAACATTATGAGACTTTAATATCAGTTCATCCTTCGGCTTTGCTCAACCTGGAGAAGGAAATGAGGGAATCCCTTAATCAGGTCGATTTGGAGAGGTTAAAGGAAAAAAAATCAACTCCTGAATCTGGGATGAAGGCAAAGTTTGTGATTGAACTCATACGGCTTAGTGATGCTATGAATGAAAGAGTTTTGGTGTTCAGTCAATATATTAATGCCTTGACCTTTTTAAAGGAGCTTTTGAAATCTCAGTTTCAGTGGACTGAAGGGGATGAGGTCCTGTATATGTATGGAGCAGATGATGAAAAGCAGCGCCAATCATCAGTGAAGGCTTTCAATGATCCATCAAGCAAAGCCAAGGTACTATTAGCTTCAACGAGAGGTTGTAACGAAGGAATAAATTTAGTTGGAGCTTCAAGAGTTGTACTGCTTGATGTTACATGGAATCCATCTGTTGAGAGGCAAGCTATATCCCGAGCATACCGTTTGGGACAGAAGAAAATTGTGTTCATCTATCATCTCCTCATGGCTGGGGCAAGAGAAGAAGGCAAACACAGTAGGCAAGTTGAGAAGCATCGGTTGTCGGAATTGGTATTTTCTTGTTCGGATATGGAAGCTGCCAAGAAAATCCCAGCTGTGGTCGCAGAGGATAAAATTTTGGAAGAGATGGTCCAACATCAGAAACTCAAGCATATGTTTGAAAAGATAACATTGCTGGATGAAGCTTCATGTTTTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

1072

Amino Acids

120.31

Weight (kDa)

6.04

Isoelectric Point (pI)

47.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 501 - 714 2e-08 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 533 - 854 1.8e-22 SNF2-related domain
Helicase_C PF00271 871 - 989 9.7e-18 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1703
AccI GTMKAC 1 cut(s) 1955
AccII CGCG 1 cut(s) 1826
AciI CCGC 2 cut(s) 244, 1852
AclWI GGATC 2 cut(s) 2204, 2810
AcoI YGGCCR 3 cut(s) 715, 1354, 2262
AcuI CTGAAG 3 cut(s) 489, 1646, 2760
AdeI CACNNNGTG 1 cut(s) 1467
AfiI CCNNNNNNNGG 6 cut(s) 992, 1631, 2533, 2557, 2603, 3112
AflIII ACRYGT 1 cut(s) 1640
AhdI GACNNNNNGTC 1 cut(s) 1390
AjiI CACGTC 1 cut(s) 1643
AjnI CCWGG 7 cut(s) 917, 1480, 1624, 1730, 1898, 2377, 2526
Alw21I GWGCWC 2 cut(s) 917, 1450
Alw26I GTCTC 5 cut(s) 393, 535, 818, 1398, 2483
AlwI GGATC 2 cut(s) 2204, 2810
Ama87I CYCGRG 1 cut(s) 2949
AoxI GGCC 6 cut(s) 715, 887, 1354, 1694, 2186, 2262
ApeKI GCWGC 7 cut(s) 105, 1063, 1408, 1570, 1817, 2785, 3092
AseI ATTAAT 1 cut(s) 2688
Asp700I GAANNNNTTC 2 cut(s) 703, 2807
AspLEI GCGC 3 cut(s) 676, 2332, 2790
AspS9I GGNCC 2 cut(s) 2752, 3145
AsuC2I CCSGG 1 cut(s) 2028
AsuHPI GGTGA 5 cut(s) 659, 824, 1720, 2294, 2300
AsuII TTCGAA 1 cut(s) 530
AvaI CYCGRG 1 cut(s) 2949
AvaII GGWCC 2 cut(s) 2752, 3145
BalI TGGCCA 2 cut(s) 717, 2264
BbsI GAAGAC 2 cut(s) 1389, 1643
Bbv12I GWGCWC 2 cut(s) 917, 1450
BbvI GCAGC 7 cut(s) 117, 1050, 1395, 1557, 1829, 2797, 3079
BccI CCATC 8 cut(s) 638, 644, 1451, 1586, 2279, 2827, 2932, 3136
BceAI ACGGC 1 cut(s) 2654
BcgI CGANNNNNNTGC 6 cut(s) 665, 699, 1816, 1850, 2042, 2076
BciT130I CCWGG 7 cut(s) 919, 1482, 1626, 1732, 1900, 2379, 2528
BciVI GTATCC 1 cut(s) 1512
BclI TGATCA 2 cut(s) 724, 843
BcnI CCSGG 1 cut(s) 2028
BcoDI GTCTC 5 cut(s) 393, 535, 818, 1398, 2483
BfaI CTAG 3 cut(s) 30, 1991, 2322
BfmI CTRYAG 4 cut(s) 10, 21, 294, 1171
BfoI RGCGCY 1 cut(s) 2791
BfuI GTATCC 1 cut(s) 1512
BglI GCCNNNNNGGC 1 cut(s) 1362
BglII AGATCT 1 cut(s) 1145
BisI GCNGC 8 cut(s) 106, 1064, 1409, 1571, 1818, 1853, 2786, 3093
BlpI GCTNAGC 1 cut(s) 109
BlsI GCNGC 8 cut(s) 107, 1065, 1410, 1572, 1819, 1854, 2787, 3094
BmcAI AGTACT 2 cut(s) 436, 464
Bme1390I CCNGG 8 cut(s) 919, 1482, 1626, 1732, 1900, 2028, 2379, 2528
Bme18I GGWCC 2 cut(s) 2752, 3145
BmeRI GACNNNNNGTC 1 cut(s) 1390
BmeT110I CYCGRG 1 cut(s) 2949
BmgBI CACGTC 1 cut(s) 1643
BmgT120I GGNCC 2 cut(s) 2752, 3145
BmiI GGNNCC 1 cut(s) 2356
BmrFI CCNGG 8 cut(s) 919, 1482, 1626, 1732, 1900, 2028, 2379, 2528
BmsI GCATC 7 cut(s) 562, 847, 1315, 1926, 2244, 2638, 3058
BoxI GACNNNNGTC 2 cut(s) 1652, 1875
BpiI GAAGAC 2 cut(s) 1389, 1643
BpmI CTGGAG 3 cut(s) 1188, 1992, 2549
Bpu10I CCTNAGC 1 cut(s) 1209
Bpu1102I GCTNAGC 1 cut(s) 109
Bpu14I TTCGAA 1 cut(s) 530
BpuEI CTTGAG 1 cut(s) 3146
BpuMI CCSGG 1 cut(s) 2028
BsaAI YACGTR 1 cut(s) 2366
BsaI GGTCTC 3 cut(s) 535, 818, 1398
BsaJI CCNNGG 7 cut(s) 890, 918, 1480, 1731, 1921, 2378, 2832
BsaWI WCCGGW 1 cut(s) 710
BsaXI ACNNNNNCTCC 4 cut(s) 1304, 1334, 2339, 2369
Bsc4I CCNNNNNNNGG 6 cut(s) 992, 1631, 2533, 2557, 2603, 3112
Bse1I ACTGG 3 cut(s) 1394, 1443, 2198
Bse3DI GCAATG 3 cut(s) 1418, 2271, 3185
BseBI CCWGG 7 cut(s) 919, 1482, 1626, 1732, 1900, 2379, 2528
BseDI CCNNGG 7 cut(s) 890, 918, 1480, 1731, 1921, 2378, 2832
BseLI CCNNNNNNNGG 6 cut(s) 992, 1631, 2533, 2557, 2603, 3112
BseMI GCAATG 3 cut(s) 1418, 2271, 3185
BseMII CTCAG 6 cut(s) 123, 558, 1209, 2142, 2406, 2738
BseNI ACTGG 3 cut(s) 1394, 1443, 2198
BseRI GAGGAG 6 cut(s) 188, 239, 411, 1701, 1754, 2987
BseXI GCAGC 7 cut(s) 117, 1050, 1395, 1557, 1829, 2797, 3079
BseYI CCCAGC 2 cut(s) 3005, 3106
BsgI GTGCAG 1 cut(s) 1944
Bsh1236I CGCG 1 cut(s) 1826
BshFI GGCC 6 cut(s) 717, 889, 1356, 1696, 2188, 2264
BsiHKAI GWGCWC 2 cut(s) 917, 1450
BsiHKCI CYCGRG 1 cut(s) 2949
BsiSI CCGG 2 cut(s) 711, 2028
BslFI GGGAC 3 cut(s) 270, 1484, 2979
BslI CCNNNNNNNGG 6 cut(s) 992, 1631, 2533, 2557, 2603, 3112
BsmAI GTCTC 5 cut(s) 393, 535, 818, 1398, 2483
BsmFI GGGAC 3 cut(s) 270, 1484, 2979
BsmI GAATGC 2 cut(s) 860, 1554
BsnI GGCC 6 cut(s) 717, 889, 1356, 1696, 2188, 2264
Bso31I GGTCTC 3 cut(s) 535, 818, 1398
BsoBI CYCGRG 1 cut(s) 2949
Bsp119I TTCGAA 1 cut(s) 530
Bsp1286I GDGCHC 2 cut(s) 917, 1450
Bsp1407I TGTACA 1 cut(s) 2163
Bsp143I GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
Bsp1720I GCTNAGC 1 cut(s) 109
Bsp68I TCGCGA 1 cut(s) 1826
BspACI CCGC 2 cut(s) 244, 1852
BspANI GGCC 6 cut(s) 717, 889, 1356, 1696, 2188, 2264
BspCNI CTCAG 6 cut(s) 122, 559, 1208, 2141, 2405, 2737
BspFNI CGCG 1 cut(s) 1826
BspLI GGNNCC 1 cut(s) 2356
BspPI GGATC 2 cut(s) 2204, 2810
BspT104I TTCGAA 1 cut(s) 530
BspTNI GGTCTC 3 cut(s) 535, 818, 1398
BsrDI GCAATG 3 cut(s) 1418, 2271, 3185
BsrGI TGTACA 1 cut(s) 2163
BsrI ACTGG 3 cut(s) 1394, 1443, 2198
BssECI CCNNGG 7 cut(s) 890, 918, 1480, 1731, 1921, 2378, 2832
BssMI GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
BssT1I CCWWGG 2 cut(s) 1921, 2832
Bst2UI CCWGG 7 cut(s) 919, 1482, 1626, 1732, 1900, 2379, 2528
Bst4CI ACNGT 9 cut(s) 356, 693, 792, 1172, 1465, 1874, 1953, 2960, 3032
Bst6I CTCTTC 6 cut(s) 508, 1041, 1077, 1401, 1731, 3132
BstAPI GCANNNNNTGC 1 cut(s) 1293
BstAUI TGTACA 1 cut(s) 2163
BstBAI YACGTR 1 cut(s) 2366
BstBI TTCGAA 1 cut(s) 530
BstC8I GCNNGC 3 cut(s) 17, 1694, 2940
BstENI CCTNNNNNAGG 3 cut(s) 1629, 2531, 2555
BstFNI CGCG 1 cut(s) 1826
BstH2I RGCGCY 1 cut(s) 2791
BstHHI GCGC 3 cut(s) 676, 2332, 2790
BstKTI GATC 8 cut(s) 727, 846, 1148, 1317, 1361, 2199, 2461, 2818
BstMAI GTCTC 5 cut(s) 393, 535, 818, 1398, 2483
BstMBI GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
BstMWI GCNNNNNNNGC 9 cut(s) 895, 1293, 1362, 1823, 1991, 2303, 2327, 2338, 3116
BstNI CCWGG 7 cut(s) 919, 1482, 1626, 1732, 1900, 2379, 2528
BstNSI RCATGY 5 cut(s) 1231, 1622, 1859, 2211, 2345
BstPAI GACNNNNGTC 2 cut(s) 1652, 1875
BstSCI CCNGG 8 cut(s) 917, 1480, 1624, 1730, 1898, 2026, 2377, 2526
BstSFI CTRYAG 4 cut(s) 10, 21, 294, 1171
BstUI CGCG 1 cut(s) 1826
BstV1I GCAGC 7 cut(s) 117, 1050, 1395, 1557, 1829, 2797, 3079
BstV2I GAAGAC 2 cut(s) 1389, 1643
BstX2I RGATCY 1 cut(s) 1145
BstXI CCANNNNNNTGG 1 cut(s) 1424
BstYI RGATCY 1 cut(s) 1145
BsuI GTATCC 1 cut(s) 1512
BsuRI GGCC 6 cut(s) 717, 889, 1356, 1696, 2188, 2264
BtrI CACGTC 1 cut(s) 1643
BtsI GCAGTG 2 cut(s) 375, 2218
BtuMI TCGCGA 1 cut(s) 1826
Cac8I GCNNGC 3 cut(s) 17, 1694, 2940
CfoI GCGC 3 cut(s) 676, 2332, 2790
Cfr13I GGNCC 2 cut(s) 2752, 3145
CseI GACGC 1 cut(s) 761
DpnI GATC 8 cut(s) 726, 845, 1147, 1316, 1360, 2198, 2460, 2817
DpnII GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
DraI TTTAAA 2 cut(s) 2473, 2706
DraIII CACNNNGTG 1 cut(s) 1467
DriI GACNNNNNGTC 1 cut(s) 1390
EaeI YGGCCR 3 cut(s) 715, 1354, 2262
Eam1104I CTCTTC 6 cut(s) 508, 1041, 1077, 1401, 1731, 3132
Eam1105I GACNNNNNGTC 1 cut(s) 1390
EarI CTCTTC 6 cut(s) 508, 1041, 1077, 1401, 1731, 3132
EciI GGCGGA 1 cut(s) 259
Eco130I CCWWGG 2 cut(s) 1921, 2832
Eco31I GGTCTC 3 cut(s) 535, 818, 1398
Eco47I GGWCC 2 cut(s) 2752, 3145
Eco57I CTGAAG 3 cut(s) 489, 1646, 2760
Eco88I CYCGRG 1 cut(s) 2949
EcoNI CCTNNNNNAGG 3 cut(s) 1629, 2531, 2555
EcoO109I RGGNCCY 1 cut(s) 2752
EcoRI GAATTC 3 cut(s) 452, 784, 2442
EcoRII CCWGG 7 cut(s) 917, 1480, 1624, 1730, 1898, 2377, 2526
EcoT14I CCWWGG 2 cut(s) 1921, 2832
EcoT22I ATGCAT 1 cut(s) 862
ErhI CCWWGG 2 cut(s) 1921, 2832
FalI AAGNNNNNCTT 2 cut(s) 487, 519
FaqI GGGAC 3 cut(s) 270, 1484, 2979
FauNDI CATATG 2 cut(s) 2079, 3168
FbaI TGATCA 2 cut(s) 724, 843
FblI GTMKAC 1 cut(s) 1955
Fnu4HI GCNGC 8 cut(s) 106, 1064, 1409, 1571, 1818, 1853, 2786, 3093
Fsp4HI GCNGC 8 cut(s) 106, 1064, 1409, 1571, 1818, 1853, 2786, 3093
FspBI CTAG 3 cut(s) 30, 1991, 2322
GlaI GCGC 3 cut(s) 675, 2331, 2789
GluI GCNGC 8 cut(s) 106, 1064, 1409, 1571, 1818, 1853, 2786, 3093
GsaI CCCAGC 2 cut(s) 3009, 3110
GsuI CTGGAG 3 cut(s) 1188, 1992, 2549
HaeII RGCGCY 1 cut(s) 2791
HaeIII GGCC 6 cut(s) 717, 889, 1356, 1696, 2188, 2264
HapII CCGG 2 cut(s) 711, 2028
HgaI GACGC 1 cut(s) 761
HhaI GCGC 3 cut(s) 676, 2332, 2790
Hin6I GCGC 3 cut(s) 674, 2330, 2788
HinP1I GCGC 3 cut(s) 674, 2330, 2788
HindIII AAGCTT 3 cut(s) 54, 896, 3198
HpaII CCGG 2 cut(s) 711, 2028
HphI GGTGA 5 cut(s) 659, 824, 1720, 2294, 2300
Hpy166II GTNNAC 6 cut(s) 689, 1870, 1956, 2216, 2347, 2736
Hpy8I GTNNAC 6 cut(s) 689, 1870, 1956, 2216, 2347, 2736
HpyCH4III ACNGT 9 cut(s) 356, 693, 792, 1172, 1465, 1874, 1953, 2960, 3032
HpyCH4IV ACGT 5 cut(s) 259, 679, 1642, 2116, 2365
HpyF10VI GCNNNNNNNGC 9 cut(s) 895, 1293, 1362, 1823, 1991, 2303, 2327, 2338, 3116
HpySE526I ACGT 5 cut(s) 259, 679, 1642, 2116, 2365
HspAI GCGC 3 cut(s) 674, 2330, 2788
Ksp22I TGATCA 2 cut(s) 724, 843
Kzo9I GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
LmnI GCTCC 7 cut(s) 1345, 1714, 2318, 2360, 2710, 2768, 2885
Lsp1109I GCAGC 7 cut(s) 117, 1050, 1395, 1557, 1829, 2797, 3079
LweI GCATC 7 cut(s) 562, 847, 1315, 1926, 2244, 2638, 3058
MaeI CTAG 3 cut(s) 30, 1991, 2322
MaeII ACGT 5 cut(s) 259, 679, 1642, 2116, 2365
MaeIII GTNAC 8 cut(s) 812, 1030, 1089, 1216, 1931, 2418, 2861, 2911
MalI GATC 8 cut(s) 726, 845, 1147, 1316, 1360, 2198, 2460, 2817
MboI GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
MfeI CAATTG 3 cut(s) 468, 664, 2172
MflI RGATCY 1 cut(s) 1145
MhlI GDGCHC 2 cut(s) 917, 1450
MlsI TGGCCA 2 cut(s) 717, 2264
MluNI TGGCCA 2 cut(s) 717, 2264
MlyI GAGTC 4 cut(s) 395, 1187, 1546, 2083
MmeI TCCRAC 3 cut(s) 2863, 3039, 3172
Mox20I TGGCCA 2 cut(s) 717, 2264
Mph1103I ATGCAT 1 cut(s) 862
MroXI GAANNNNTTC 2 cut(s) 703, 2807
MscI TGGCCA 2 cut(s) 717, 2264
MslI CAYNNNNRTG 2 cut(s) 1455, 1512
Msp20I TGGCCA 2 cut(s) 717, 2264
MspA1I CMGCKG 2 cut(s) 1852, 3110
MspI CCGG 2 cut(s) 711, 2028
MspR9I CCNGG 8 cut(s) 919, 1482, 1626, 1732, 1900, 2028, 2379, 2528
MunI CAATTG 3 cut(s) 468, 664, 2172
Mva1269I GAATGC 2 cut(s) 860, 1554
MvaI CCWGG 7 cut(s) 919, 1482, 1626, 1732, 1900, 2379, 2528
MvnI CGCG 1 cut(s) 1826
MwoI GCNNNNNNNGC 9 cut(s) 895, 1293, 1362, 1823, 1991, 2303, 2327, 2338, 3116
NciI CCSGG 1 cut(s) 2028
NdeI CATATG 2 cut(s) 2079, 3168
NdeII GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
NlaIV GGNNCC 1 cut(s) 2356
NmeAIII GCCGAG 1 cut(s) 915
NmuCI GTSAC 2 cut(s) 812, 1089
NruI TCGCGA 1 cut(s) 1826
NsiI ATGCAT 1 cut(s) 862
NspI RCATGY 5 cut(s) 1231, 1622, 1859, 2211, 2345
NspV TTCGAA 1 cut(s) 530
PctI GAATGC 2 cut(s) 860, 1554
PdmI GAANNNNTTC 2 cut(s) 703, 2807
PfoI TCCNGGA 1 cut(s) 1898
PkrI GCNGC 8 cut(s) 107, 1065, 1410, 1572, 1819, 1854, 2787, 3094
PleI GAGTC 4 cut(s) 395, 1187, 1545, 2082
PpsI GAGTC 4 cut(s) 395, 1187, 1545, 2082
Ppu21I YACGTR 1 cut(s) 2366
PpuMI RGGWCCY 1 cut(s) 2752
PshAI GACNNNNGTC 2 cut(s) 1652, 1875
PshBI ATTAAT 1 cut(s) 2688
PsiI TTATAA 1 cut(s) 1703
Psp5II RGGWCCY 1 cut(s) 2752
Psp6I CCWGG 7 cut(s) 917, 1480, 1624, 1730, 1898, 2377, 2526
PspFI CCCAGC 2 cut(s) 3005, 3106
PspGI CCWGG 7 cut(s) 917, 1480, 1624, 1730, 1898, 2377, 2526
PspN4I GGNNCC 1 cut(s) 2356
PspPI GGNCC 2 cut(s) 2752, 3145
PspPPI RGGWCCY 1 cut(s) 2752
PsuI RGATCY 1 cut(s) 1145
PvuII CAGCTG 1 cut(s) 3110
RruI TCGCGA 1 cut(s) 1826
RseI CAYNNNNRTG 2 cut(s) 1455, 1512
SatI GCNGC 8 cut(s) 106, 1064, 1409, 1571, 1818, 1853, 2786, 3093
Sau3AI GATC 8 cut(s) 724, 843, 1145, 1314, 1358, 2196, 2458, 2815
Sau96I GGNCC 2 cut(s) 2752, 3145
ScaI AGTACT 2 cut(s) 436, 464
SchI GAGTC 4 cut(s) 395, 1187, 1546, 2083
ScrFI CCNGG 8 cut(s) 919, 1482, 1626, 1732, 1900, 2028, 2379, 2528
SduI GDGCHC 2 cut(s) 917, 1450
SfaNI GCATC 7 cut(s) 562, 847, 1315, 1926, 2244, 2638, 3058
SfcI CTRYAG 4 cut(s) 10, 21, 294, 1171
SfuI TTCGAA 1 cut(s) 530
SinI GGWCC 2 cut(s) 2752, 3145
SmiMI CAYNNNNRTG 2 cut(s) 1455, 1512
SmlI CTYRAG 1 cut(s) 3161
SmoI CTYRAG 1 cut(s) 3161
SsiI CCGC 2 cut(s) 244, 1852
SspI AATATT 2 cut(s) 1292, 2011
SspMI CTAG 3 cut(s) 30, 1991, 2322
StyD4I CCNGG 8 cut(s) 917, 1480, 1624, 1730, 1898, 2026, 2377, 2526
StyI CCWWGG 2 cut(s) 1921, 2832
TaaI ACNGT 9 cut(s) 356, 693, 792, 1172, 1465, 1874, 1953, 2960, 3032
TaiI ACGT 5 cut(s) 262, 682, 1645, 2119, 2368
TaqI TCGA 6 cut(s) 252, 530, 962, 2062, 2154, 2562
TatI WGTACW 4 cut(s) 434, 462, 2163, 2899
TauI GCSGC 1 cut(s) 1855
TseFI GTSAC 2 cut(s) 812, 1089
TseI GCWGC 7 cut(s) 105, 1063, 1408, 1570, 1817, 2785, 3092
Tsp45I GTSAC 2 cut(s) 812, 1089
VpaK11BI GGWCC 2 cut(s) 2752, 3145
VspI ATTAAT 1 cut(s) 2688
XagI CCTNNNNNAGG 3 cut(s) 1629, 2531, 2555
XceI RCATGY 5 cut(s) 1231, 1622, 1859, 2211, 2345
XmiI GTMKAC 1 cut(s) 1955
XmnI GAANNNNTTC 2 cut(s) 703, 2807
XspI CTAG 3 cut(s) 30, 1991, 2322
ZrmI AGTACT 2 cut(s) 436, 464
Zsp2I ATGCAT 1 cut(s) 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.