Rh2BG489300

SNF2 domain-containing protein CLASSY

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
68910307 .. 68918104
7798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG489300.1

Sequence Viewer

Length: 3954 bp
ATGGATTATAGGCCTGTATCAAGCAGAACAAGGTCGAAGAGAGACAAAGCTATCATTGAACTTCATTGGCAAATGAAAATTAACAGTGGGGTGAGTCCAGCCACAAGGGATAAGAAAATGAGGAGGTCCAACCAGGCTTCTGTTTCTCATATGGGTGAGTCCAGTTCTAGGAGACAGAGTTTTGAGTGGGTTGCTGATCATGTGGAATTCCTGGAAAACCAACAGAATGATGATGATTCAGAGAGTGTTATTAAAAGAAGTGGGAAACAGGGAAAGGGGAAAGGAGTTGCGGTTGGTGTGAAGAGAAAGAGGAGTTTAGGATTAGATGTGTCGGCTGATAGCAACAAAGATGGTTGCCATTGGATAGCTGTTTCGGATAATGGTCTGGAAGTTGTCGATTTGGTGGATAGTCCTGATGATGATGAGGTACTAGTTTCTAAAGGTAAAGAGGGAGGAGTAGGAGTTGATGTTGATGTTGATGGTGTGAGTGATGATGAAAGTGATGAGGATGTTGATGTTGATGGTGTGAGTGATGATGAAAGTGATGAGGATGTTGATGTTGATGGTGTGAGTGATGATGAAAGTGATGAGGATGTTTCATCAGCAGAGGAAGATGACAGTAGTGACGAAAGTGTGTTCTCTATAAAGGAGGAAAATGAATGTGTTTCCTTATCAGTTGAAGATAGTAGTGAGCAGGAAAATGAAGAGGAGAGTGAGGTGACGGAGAAGAATGAGAAAGCGTGCAAGGGAGAAAGTGTTGAGGTTGATTGGAAGGGAAAGATAAATGCTGATGGTGATGTTCTGCATTATTGTTCTGCTCATGATACTGATACTGATGTCAGAAGTGAGCAAGAGTGGAAGGAAGAACGTCTTGGAATTCATCCGAAGGGAAAGATTAATGCTGATGGGGATGATCTACATTCTTCTTCTGATCATGATATCAGTGACAGAAGGGCAAAATTGGGGGAGGCAGAGAGTGTGTTGGTTACCTCCTGTACTAAAAAAAAGAGCACGAGGGTACCAAAACAGAAAAGATCACCTACTATTGCATTTGAAGCCCCAAAAGTTGAATGTCTCCCTTTGAGATTCAGTTTTGCTAAGCAGCCAACTATTCCTGAGAAGCCAGATAATGAAAGAGAAGTAGATGCCCTTCTTGCTGAATATAAATTTGCTATAACATATGAGAATGCTTCTGCTGATTCTAAGGCTAAAGACGGCTACTTTACAAGATCAGATAATAACAGAAATGATGTCAATGATGTGACTTATGGTGGTAGTCCAGAAACGGCAATTGATAATGGGAGAACAATTGGTTTGCAGACGGCTTTCAATAAGAATGAAGCTGCCAAAGGACATGATGATGCAAGGTCAAAGAATAGGATACATGATTTCGATGATGAGACGCATGGTGGTGCTTCAGAATCTGGTTTTAATAAAGGCAGTAAATTTGATGTGCACAGGGCTTGCAAGAAGGGTGAAGAGGCCAAAGGAAACAACTTTTCAAGGTCCTTTAATTCACGAAAGGATGACAAAGATGAGACATATGGTGGTAGTCGTCCAGAAACATATAAGAAGAAAGAAAGGGTAGGGAATCTTACCAACAAAAAGGGCATTACAGCACCAAAAGATTGCAATGCCTTTATGATTCTTGTAGATTCGATTTATGACAAGGGAGAAGTGTCAGGGGAACCACCTCCGTTTGGGGAAGTATCCCCCCAAGATGAAGCTCCAAGAGATGAGCCTCTTCCATTGTTTTTCACGCTTGGTCATCCTCCAAGTCCTGCACCAGTGAAGTCAGCTTCTGAGATAGAACTAGAAACCCTTTTTGAAGAATATGACTTTGTCCAAATGTCTGAAGAGATTGGTTCCACTGATTCTAAACTGGTTGAAACTAATGACTCAGTCCTTCCCGGTACAGAAGTTACTCAGTATATGCTTTGTAGTCAAGGGAAACACGATCTTATACTTGATGAAGAAATTGGACTCATATGCCAATTCTGCCCTCATGTGCATCGGGAGATCAAGTATATTGTACCAGACTTTGCTCCAAACCCTTATGGAAAAGCTGGGAAGAGATTTTATGAAGAAGACAACCGGTCTGTCCTTGATGATCTTCAGTGTAATGACCCTGACAATCGTGGCTTTAGTTCGGATGCTCATACTGAAGGCACAGTGTGGGACTTGATCCCTGGTGTGAAAAGTGATATGTACGCTCATCAGCGTGAAGGTTTCGAATTTATTTGGAGTCACTTAGCTGGTGGAATTCAGCTTGGAAAGTTGGCAAAACCTAGTGCTTGTGGCGGTGATGGATGCATTATATCACATGCACCTGGGACTGGGAAGACTCGTTTGACTATTATCTTTATCCAGTCGTACATGAATTTTAACCCATCAAGCAGGCCACTCATTGTTGCTCCACGTACCATGCTTCTTACTTGGGAAGAGGAGTTTAAGAAATGGGGTTTTGACATTCCCTTTCACAATCTTAACAATCCTGACTTCACTGGCAAAGAGGATGAAGCAGCTCGCAATCTTGTGAAGGATGGTAAAAGTTCAGAAATGATAAACTTGACCCGTATTGTGAAGCTAAAGTCCTGGGCAGAGAAAAGAAGCATCTTGGGTATTAGTTATTCACTGTTTGAGCAGATTTGTGGAGCTTCTACCAAGAAAGGAAAACATCCACTTTCTCCAAGACGAAAGCTCGAAGCTGAGCAGATGTGGAAAGTCCTTGTTGATTTTCCTGGTCTTGTAGTATTTGACGAAGGGCACAATCCTCGCAACGACCAGAGTTACTCATGGAATGCTCTTTTAAAACTGAAAACAAGAAGGCGCATTCTCCTCTCCGGTACTCCTTTTCAGAATAATTTTGAGGAGCTCTACAATACAGTCTGCTTGGTGAGGCCAGAATGGACCACCAATCCTACCTGCCTTGGAGCTTTTGACAAAAAGCAACGGACTTGGGGCCAAATGCGAGGCAGAAAAGGCAATGCTGGGAAATGCCAATTTGCTGATGATAATACAAAACGAGCTAAAGAGGTCAGAGCTATGATTTCCCCATTTGTGCATGTTTACAAAGGCACCATACTGCAAGATAAGCTTCCTGGGTTAAGGAACTCAGTTGTTGTTTTACAGCCAACAGCTTTACAGCAGAGATGTTCTGACAGAATTCAGCTGATAAAAAATCCATTTAAATATGAACGAATAGAGGCTAAAGTAACTATCCACCCTTCTCTCTTGCTTAATGAAAATCGCTCTATGTTTCTTGAGGAAGACAAGTATTCAGGTGACTGGGAAAGGCTAACAGAAATCAAGTTAAATCCTGAAGGTGGAGTGAAGGCAAGATTTGCAGTTGATCTCATTCGGCTTTGTCAAGCTATGAATGAAAGAGTTTTGGTATTCAGTCAGTGGGTTGATCCATTGCTCTTAATAAGGGACCTGCTCAAATCTCAGTTTCAGTGGGTGGAAGGAGAGGAGGTTATGTATATGGATGGAAAATGTGATGCAAAGCAGCGCCAATCCTCAATGAGTTATTTCAATGATCCATCCACCAAAGCAAAGGTCATGTTAGCTACAACAAGAGGTTGCAACGAAGGAATAAGTTTAGTTGGAGCTTCAAGGGTTGTACTGCTTGATGTTGCATGGAACCCTTCTGTTGAGAGGCAAGCTATATCCCGAGCATACCGATTGGGACAGAAAAAAATTGTGTTCATCTACCATCTCCTCATGGCTGGGGCAAGAGAAGAGGACAAATACAACCGACAAGTTGAGAAGTATCGGTTGTCTGAATTGGTATTTTCTTGTTCGGATACAGAAGCTGATGCCAAGAAAATCCCAGCTTCGGTCGCGGAGGACAAGATTTTGGAAGAGATGGTTCAGCACCAGAAACTGAAGCATATATTTCAAAAGATAACATTACTGAATGAAGCTTCATATTTGAACGAAGAATTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1317

Amino Acids

147.95

Weight (kDa)

5.2

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 739 - 1060 2.1e-23 SNF2-related domain
ResIII PF04851 740 - 952 1.9e-09 Type III restriction enzyme, res subunit
Helicase_C PF00271 1118 - 1230 5.3e-16 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2933, 3444
Acc65I GGTACC 1 cut(s) 1018
AccB1I GGYRCC 2 cut(s) 1018, 3077
AccII CGCG 1 cut(s) 3845
AciI CCGC 3 cut(s) 290, 2301, 3845
AclWI GGATC 3 cut(s) 2179, 3407, 3533
AcsI RAATTY 9 cut(s) 206, 876, 1166, 1445, 2234, 2262, 2380, 3165, 3944
AcuI CTGAAG 6 cut(s) 1401, 1875, 2099, 2184, 3342, 3908
AdeI CACNNNGTG 1 cut(s) 2175
AfiI CCNNNNNNNGG 5 cut(s) 168, 1700, 2336, 3326, 3838
AgeI ACCGGT 1 cut(s) 2094
AhdI GACNNNNNGTC 1 cut(s) 2095
AhlI ACTAGT 1 cut(s) 430
AjnI CCWGG 7 cut(s) 132, 210, 2188, 2329, 2594, 2740, 3100
AjuI GAANNNNNNNTTGG 2 cut(s) 855, 887
Alw21I GWGCWC 3 cut(s) 1013, 1458, 2877
Alw26I GTCTC 5 cut(s) 36, 166, 1079, 1394, 1532
Alw44I GTGCAC 1 cut(s) 1454
AlwI GGATC 3 cut(s) 2179, 3407, 3533
AlwNI CAGNNNCTG 4 cut(s) 1424, 1802, 3815, 3886
Ama87I CYCGRG 1 cut(s) 3672
AoxI GGCC 5 cut(s) 11, 1482, 2399, 2900, 2962
ApaLI GTGCAC 1 cut(s) 1454
ApeKI GCWGC 4 cut(s) 1102, 1343, 2522, 3508
ApoI RAATTY 9 cut(s) 206, 876, 1166, 1445, 2234, 2262, 2380, 3165, 3944
ArsI GACNNNNNNTTYG 2 cut(s) 3543, 3575
AseI ATTAAT 1 cut(s) 897
AsiGI ACCGGT 1 cut(s) 2094
Asp718I GGTACC 1 cut(s) 1018
AspLEI GCGC 2 cut(s) 2832, 3513
AspS9I GGNCC 5 cut(s) 126, 1506, 2910, 2962, 3433
AsuC2I CCSGG 1 cut(s) 1911
AsuHPI GGTGA 9 cut(s) 103, 167, 730, 806, 1029, 1487, 2315, 2908, 3296
AsuII TTCGAA 1 cut(s) 2232
AvaI CYCGRG 1 cut(s) 3672
AvaII GGWCC 4 cut(s) 126, 1506, 2910, 3433
BaeGI GKGCMC 2 cut(s) 1458, 2769
BaeI ACNNNNGTAYC 6 cut(s) 822, 855, 1002, 1035, 1905, 1938
BanI GGYRCC 2 cut(s) 1018, 3077
BanII GRGCYC 1 cut(s) 2877
BarI GAAGNNNNNNTAC 2 cut(s) 1134, 1166
BauI CACGAG 1 cut(s) 1012
BbsI GAAGAC 3 cut(s) 2094, 2348, 3276
Bbv12I GWGCWC 3 cut(s) 1013, 1458, 2877
BbvI GCAGC 4 cut(s) 1114, 1330, 2534, 3520
BceAI ACGGC 3 cut(s) 1231, 1302, 1338
BcgI CGANNNNNNTGC 2 cut(s) 2756, 2790
BciT130I CCWGG 7 cut(s) 134, 212, 2190, 2331, 2596, 2742, 3102
BciVI GTATCC 3 cut(s) 1374, 1720, 3799
BclI TGATCA 2 cut(s) 196, 931
BcnI CCSGG 1 cut(s) 1911
BcoDI GTCTC 5 cut(s) 36, 166, 1079, 1394, 1532
BcuI ACTAGT 1 cut(s) 430
BfaI CTAG 4 cut(s) 168, 431, 1814, 2289
BfoI RGCGCY 1 cut(s) 3514
BfuAI ACCTGC 2 cut(s) 2933, 3444
BfuI GTATCC 3 cut(s) 1374, 1720, 3799
BisI GCNGC 4 cut(s) 1103, 1344, 2523, 3509
BlpI GCTNAGC 2 cut(s) 1098, 2709
BlsI GCNGC 4 cut(s) 1104, 1345, 2524, 3510
Bme1390I CCNGG 8 cut(s) 134, 212, 1911, 2190, 2331, 2596, 2742, 3102
Bme18I GGWCC 4 cut(s) 126, 1506, 2910, 3433
BmeRI GACNNNNNGTC 1 cut(s) 2095
BmeT110I CYCGRG 1 cut(s) 3672
BmgT120I GGNCC 5 cut(s) 126, 1506, 2910, 2962, 3433
BmiI GGNNCC 7 cut(s) 1020, 1689, 1867, 2963, 3079, 3434, 3644
BmrFI CCNGG 8 cut(s) 134, 212, 1911, 2190, 2331, 2596, 2742, 3102
BmrI ACTGGG 2 cut(s) 2346, 3298
BmsI GCATC 8 cut(s) 1135, 1351, 2020, 2143, 2300, 2622, 3490, 3808
BmuI ACTGGG 2 cut(s) 2346, 3298
BpiI GAAGAC 3 cut(s) 2094, 2348, 3276
Bpu1102I GCTNAGC 2 cut(s) 1098, 2709
Bpu14I TTCGAA 1 cut(s) 2232
BpuEI CTTGAG 1 cut(s) 3284
BpuMI CCSGG 1 cut(s) 1911
BsaAI YACGTR 1 cut(s) 2420
BsaJI CCNNGG 5 cut(s) 2188, 2330, 2595, 2929, 3101
BsaWI WCCGGW 2 cut(s) 2094, 2843
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 1700, 2336, 3326, 3838
Bse118I RCCGGY 1 cut(s) 2094
Bse1I ACTGG 7 cut(s) 162, 1787, 1887, 2341, 2368, 2509, 3293
Bse3DI GCAATG 3 cut(s) 1639, 2992, 3416
BseBI CCWGG 7 cut(s) 134, 212, 2190, 2331, 2596, 2742, 3102
BseDI CCNNGG 5 cut(s) 2188, 2330, 2595, 2929, 3101
BseLI CCNNNNNNNGG 5 cut(s) 168, 1700, 2336, 3326, 3838
BseMI GCAATG 3 cut(s) 1639, 2992, 3416
BseMII CTCAG 7 cut(s) 1107, 1794, 1914, 1940, 2700, 3129, 3461
BseNI ACTGG 7 cut(s) 162, 1787, 1887, 2341, 2368, 2509, 3293
BseRI GAGGAG 9 cut(s) 136, 325, 468, 722, 2459, 2828, 2885, 3485, 3710
BseSI GKGCMC 2 cut(s) 1458, 2769
BseXI GCAGC 4 cut(s) 1114, 1330, 2534, 3520
BseYI CCCAGC 4 cut(s) 2066, 2990, 3728, 3832
BsgI GTGCAG 1 cut(s) 1767
Bsh1236I CGCG 1 cut(s) 3845
Bsh1285I CGRYCG 1 cut(s) 3843
BshFI GGCC 5 cut(s) 13, 1484, 2401, 2902, 2964
BshNI GGYRCC 2 cut(s) 1018, 3077
BshTI ACCGGT 1 cut(s) 2094
BsiEI CGRYCG 1 cut(s) 3843
BsiHKAI GWGCWC 3 cut(s) 1013, 1458, 2877
BsiHKCI CYCGRG 1 cut(s) 3672
BsiSI CCGG 3 cut(s) 1911, 2095, 2844
BslFI GGGAC 4 cut(s) 2192, 2347, 3446, 3702
BslI CCNNNNNNNGG 5 cut(s) 168, 1700, 2336, 3326, 3838
BsmAI GTCTC 5 cut(s) 36, 166, 1079, 1394, 1532
BsmBI CGTCTC 1 cut(s) 1394
BsmFI GGGAC 4 cut(s) 2192, 2347, 3446, 3702
BsmI GAATGC 3 cut(s) 1192, 2806, 2832
BsnI GGCC 5 cut(s) 13, 1484, 2401, 2902, 2964
BsoBI CYCGRG 1 cut(s) 3672
Bsp119I TTCGAA 1 cut(s) 2232
Bsp1286I GDGCHC 4 cut(s) 1013, 1458, 2769, 2877
Bsp1720I GCTNAGC 2 cut(s) 1098, 2709
BspACI CCGC 3 cut(s) 290, 2301, 3845
BspANI GGCC 5 cut(s) 13, 1484, 2401, 2902, 2964
BspCNI CTCAG 7 cut(s) 1108, 1795, 1913, 1939, 2701, 3128, 3460
BspFNI CGCG 1 cut(s) 3845
BspHI TCATGA 2 cut(s) 820, 934
BspLI GGNNCC 7 cut(s) 1020, 1689, 1867, 2963, 3079, 3434, 3644
BspMI ACCTGC 2 cut(s) 2933, 3444
BspPI GGATC 3 cut(s) 2179, 3407, 3533
BspT104I TTCGAA 1 cut(s) 2232
BspT107I GGYRCC 2 cut(s) 1018, 3077
BsrDI GCAATG 3 cut(s) 1639, 2992, 3416
BsrFI RCCGGY 1 cut(s) 2094
BsrI ACTGG 7 cut(s) 162, 1787, 1887, 2341, 2368, 2509, 3293
BssAI RCCGGY 1 cut(s) 2094
BssECI CCNNGG 5 cut(s) 2188, 2330, 2595, 2929, 3101
BssSI CACGAG 1 cut(s) 1012
BssT1I CCWWGG 1 cut(s) 2929
Bst2BI CACGAG 1 cut(s) 1012
Bst2UI CCWGG 7 cut(s) 134, 212, 2190, 2331, 2596, 2742, 3102
Bst4CI ACNGT 5 cut(s) 86, 620, 2173, 2637, 2887
BstAPI GCANNNNNTGC 1 cut(s) 3344
BstBAI YACGTR 1 cut(s) 2420
BstBI TTCGAA 1 cut(s) 2232
BstC8I GCNNGC 5 cut(s) 742, 1465, 2399, 2527, 3663
BstEII GGTNACC 1 cut(s) 985
BstFNI CGCG 1 cut(s) 3845
BstH2I RGCGCY 1 cut(s) 3514
BstHHI GCGC 2 cut(s) 2832, 3513
BstMAI GTCTC 5 cut(s) 36, 166, 1079, 1394, 1532
BstMCI CGRYCG 1 cut(s) 3843
BstMWI GCNNNNNNNGC 7 cut(s) 1055, 1154, 1998, 2982, 3094, 3344, 3842
BstNI CCWGG 7 cut(s) 134, 212, 2190, 2331, 2596, 2742, 3102
BstNSI RCATGY 2 cut(s) 2327, 3068
BstPI GGTNACC 1 cut(s) 985
BstSCI CCNGG 8 cut(s) 132, 210, 1909, 2188, 2329, 2594, 2740, 3100
BstSLI GKGCMC 2 cut(s) 1458, 2769
BstUI CGCG 1 cut(s) 3845
BstV1I GCAGC 4 cut(s) 1114, 1330, 2534, 3520
BstV2I GAAGAC 3 cut(s) 2094, 2348, 3276
BsuI GTATCC 3 cut(s) 1374, 1720, 3799
BsuRI GGCC 5 cut(s) 13, 1484, 2401, 2902, 2964
BveI ACCTGC 2 cut(s) 2933, 3444
Cac8I GCNNGC 5 cut(s) 742, 1465, 2399, 2527, 3663
CaiI CAGNNNCTG 4 cut(s) 1424, 1802, 3815, 3886
CciI TCATGA 2 cut(s) 820, 934
CfoI GCGC 2 cut(s) 2832, 3513
Cfr10I RCCGGY 1 cut(s) 2094
Cfr13I GGNCC 5 cut(s) 126, 1506, 2910, 2962, 3433
CseI GACGC 1 cut(s) 1411
CspAI ACCGGT 1 cut(s) 2094
DraI TTTAAA 2 cut(s) 2811, 3190
DraIII CACNNNGTG 1 cut(s) 2175
DriI GACNNNNNGTC 1 cut(s) 2095
Eam1105I GACNNNNNGTC 1 cut(s) 2095
Ecl136II GAGCTC 1 cut(s) 2875
Eco130I CCWWGG 1 cut(s) 2929
Eco147I AGGCCT 1 cut(s) 13
Eco24I GRGCYC 1 cut(s) 2877
Eco32I GATATC 1 cut(s) 940
Eco47I GGWCC 4 cut(s) 126, 1506, 2910, 3433
Eco53kI GAGCTC 1 cut(s) 2875
Eco57I CTGAAG 6 cut(s) 1401, 1875, 2099, 2184, 3342, 3908
Eco88I CYCGRG 1 cut(s) 3672
Eco91I GGTNACC 1 cut(s) 985
EcoICRI GAGCTC 1 cut(s) 2875
EcoO109I RGGNCCY 2 cut(s) 1506, 3433
EcoO65I GGTNACC 1 cut(s) 985
EcoRI GAATTC 4 cut(s) 206, 876, 2262, 3165
EcoRII CCWGG 7 cut(s) 132, 210, 2188, 2329, 2594, 2740, 3100
EcoRV GATATC 1 cut(s) 940
EcoT14I CCWWGG 1 cut(s) 2929
EcoT22I ATGCAT 1 cut(s) 2315
EcoT38I GRGCYC 1 cut(s) 2877
ErhI CCWWGG 1 cut(s) 2929
Esp3I CGTCTC 1 cut(s) 1394
FalI AAGNNNNNCTT 4 cut(s) 855, 887, 3081, 3113
FaqI GGGAC 4 cut(s) 2192, 2347, 3446, 3702
FauNDI CATATG 4 cut(s) 150, 1180, 1543, 1988
FbaI TGATCA 2 cut(s) 196, 931
Fnu4HI GCNGC 4 cut(s) 1103, 1344, 2523, 3509
FriOI GRGCYC 1 cut(s) 2877
Fsp4HI GCNGC 4 cut(s) 1103, 1344, 2523, 3509
FspBI CTAG 4 cut(s) 168, 431, 1814, 2289
GlaI GCGC 2 cut(s) 2831, 3512
GluI GCNGC 4 cut(s) 1103, 1344, 2523, 3509
GsaI CCCAGC 4 cut(s) 2070, 2994, 3732, 3836
HaeII RGCGCY 1 cut(s) 3514
HaeIII GGCC 5 cut(s) 13, 1484, 2401, 2902, 2964
HapII CCGG 3 cut(s) 1911, 2095, 2844
HgaI GACGC 1 cut(s) 1411
HhaI GCGC 2 cut(s) 2832, 3513
Hin6I GCGC 2 cut(s) 2830, 3511
HinP1I GCGC 2 cut(s) 2830, 3511
HindIII AAGCTT 2 cut(s) 3095, 3924
HpaII CCGG 3 cut(s) 1911, 2095, 2844
HphI GGTGA 9 cut(s) 103, 167, 730, 806, 1029, 1487, 2315, 2908, 3296
Hpy166II GTNNAC 2 cut(s) 1456, 3070
Hpy8I GTNNAC 2 cut(s) 1456, 3070
HpyCH4III ACNGT 5 cut(s) 86, 620, 2173, 2637, 2887
HpyCH4IV ACGT 2 cut(s) 868, 2419
HpyF10VI GCNNNNNNNGC 7 cut(s) 1055, 1154, 1998, 2982, 3094, 3344, 3842
HpySE526I ACGT 2 cut(s) 868, 2419
HspAI GCGC 2 cut(s) 2830, 3511
KpnI GGTACC 1 cut(s) 1022
Ksp22I TGATCA 2 cut(s) 196, 931
LmnI GCTCC 7 cut(s) 1732, 2050, 2419, 2654, 2872, 2933, 3608
Lsp1109I GCAGC 4 cut(s) 1114, 1330, 2534, 3520
LweI GCATC 8 cut(s) 1135, 1351, 2020, 2143, 2300, 2622, 3490, 3808
MaeI CTAG 4 cut(s) 168, 431, 1814, 2289
MaeII ACGT 2 cut(s) 868, 2419
MfeI CAATTG 2 cut(s) 1290, 1308
MhlI GDGCHC 4 cut(s) 1013, 1458, 2769, 2877
MlyI GAGTC 6 cut(s) 103, 167, 1892, 1977, 2254, 2338
MmeI TCCRAC 2 cut(s) 153, 3586
Mph1103I ATGCAT 1 cut(s) 2315
MslI CAYNNNNRTG 4 cut(s) 153, 1359, 1410, 2220
MspA1I CMGCKG 1 cut(s) 3172
MspI CCGG 3 cut(s) 1911, 2095, 2844
MspR9I CCNGG 8 cut(s) 134, 212, 1911, 2190, 2331, 2596, 2742, 3102
MunI CAATTG 2 cut(s) 1290, 1308
Mva1269I GAATGC 3 cut(s) 1192, 2806, 2832
MvaI CCWGG 7 cut(s) 134, 212, 2190, 2331, 2596, 2742, 3102
MvnI CGCG 1 cut(s) 3845
MwoI GCNNNNNNNGC 7 cut(s) 1055, 1154, 1998, 2982, 3094, 3344, 3842
NciI CCSGG 1 cut(s) 1911
NdeI CATATG 4 cut(s) 150, 1180, 1543, 1988
NlaIV GGNNCC 7 cut(s) 1020, 1689, 1867, 2963, 3079, 3434, 3644
NmuCI GTSAC 6 cut(s) 623, 718, 944, 1261, 2246, 3284
NsiI ATGCAT 1 cut(s) 2315
NspI RCATGY 2 cut(s) 2327, 3068
NspV TTCGAA 1 cut(s) 2232
PagI TCATGA 2 cut(s) 820, 934
PceI AGGCCT 1 cut(s) 13
PctI GAATGC 3 cut(s) 1192, 2806, 2832
PfeI GAWTC 8 cut(s) 236, 1086, 1199, 1421, 1591, 1645, 1655, 1874
PflFI GACNNNGTC 2 cut(s) 1841, 1901
PfoI TCCNGGA 1 cut(s) 210
PinAI ACCGGT 1 cut(s) 2094
PkrI GCNGC 4 cut(s) 1104, 1345, 2524, 3510
PleI GAGTC 6 cut(s) 102, 166, 1892, 1977, 2253, 2338
PpsI GAGTC 6 cut(s) 102, 166, 1892, 1977, 2253, 2338
Ppu21I YACGTR 1 cut(s) 2420
PpuMI RGGWCCY 2 cut(s) 1506, 3433
PshBI ATTAAT 1 cut(s) 897
Psp124BI GAGCTC 1 cut(s) 2877
Psp5II RGGWCCY 2 cut(s) 1506, 3433
Psp6I CCWGG 7 cut(s) 132, 210, 2188, 2329, 2594, 2740, 3100
PspEI GGTNACC 1 cut(s) 985
PspFI CCCAGC 4 cut(s) 2066, 2990, 3728, 3832
PspGI CCWGG 7 cut(s) 132, 210, 2188, 2329, 2594, 2740, 3100
PspN4I GGNNCC 7 cut(s) 1020, 1689, 1867, 2963, 3079, 3434, 3644
PspPI GGNCC 5 cut(s) 126, 1506, 2910, 2962, 3433
PspPPI RGGWCCY 2 cut(s) 1506, 3433
PstNI CAGNNNCTG 4 cut(s) 1424, 1802, 3815, 3886
PsyI GACNNNGTC 2 cut(s) 1841, 1901
PvuII CAGCTG 1 cut(s) 3172
RseI CAYNNNNRTG 4 cut(s) 153, 1359, 1410, 2220
SacI GAGCTC 1 cut(s) 2877
SatI GCNGC 4 cut(s) 1103, 1344, 2523, 3509
Sau96I GGNCC 5 cut(s) 126, 1506, 2910, 2962, 3433
SchI GAGTC 6 cut(s) 103, 167, 1892, 1977, 2254, 2338
ScrFI CCNGG 8 cut(s) 134, 212, 1911, 2190, 2331, 2596, 2742, 3102
SduI GDGCHC 4 cut(s) 1013, 1458, 2769, 2877
SfaNI GCATC 8 cut(s) 1135, 1351, 2020, 2143, 2300, 2622, 3490, 3808
SfuI TTCGAA 1 cut(s) 2232
SinI GGWCC 4 cut(s) 126, 1506, 2910, 3433
SmiI ATTTAAAT 1 cut(s) 3190
SmiMI CAYNNNNRTG 4 cut(s) 153, 1359, 1410, 2220
SmlI CTYRAG 1 cut(s) 3263
SmoI CTYRAG 1 cut(s) 3263
SpeI ACTAGT 1 cut(s) 430
SseBI AGGCCT 1 cut(s) 13
SsiI CCGC 3 cut(s) 290, 2301, 3845
SspMI CTAG 4 cut(s) 168, 431, 1814, 2289
SstI GAGCTC 1 cut(s) 2877
StuI AGGCCT 1 cut(s) 13
StyD4I CCNGG 8 cut(s) 132, 210, 1909, 2188, 2329, 2594, 2740, 3100
StyI CCWWGG 1 cut(s) 2929
SwaI ATTTAAAT 1 cut(s) 3190
TaaI ACNGT 5 cut(s) 86, 620, 2173, 2637, 2887
TaiI ACGT 2 cut(s) 871, 2422
TaqI TCGA 6 cut(s) 35, 396, 1392, 1658, 2232, 2703
TaqII GACCGA 1 cut(s) 3829
TatI WGTACW 2 cut(s) 995, 3622
TfiI GAWTC 8 cut(s) 236, 1086, 1199, 1421, 1591, 1645, 1655, 1874
TseFI GTSAC 6 cut(s) 623, 718, 944, 1261, 2246, 3284
TseI GCWGC 4 cut(s) 1102, 1343, 2522, 3508
Tsp45I GTSAC 6 cut(s) 623, 718, 944, 1261, 2246, 3284
TspGWI ACGGA 3 cut(s) 737, 1686, 2968
Tth111I GACNNNGTC 2 cut(s) 1841, 1901
VneI GTGCAC 1 cut(s) 1454
VpaK11BI GGWCC 4 cut(s) 126, 1506, 2910, 3433
VspI ATTAAT 1 cut(s) 897
XapI RAATTY 9 cut(s) 206, 876, 1166, 1445, 2234, 2262, 2380, 3165, 3944
XceI RCATGY 2 cut(s) 2327, 3068
XspI CTAG 4 cut(s) 168, 431, 1814, 2289
Zsp2I ATGCAT 1 cut(s) 2315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.