MD17G1146600.v1.1

SNF2 domain-containing protein CLASSY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0001072
Physical Location & Seq
Forward (+)
13289248 .. 13292708
3461 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1146600.v1.1.491

Sequence Viewer

Length: 2340 bp
ATGGACTACAGAAACTTGCCAGTAGCAAAGAGAACCAGGAAGAAGAATCGTGAGGGTGGCTCGGCCGCTGTGAGTCGAGAGTACGTGTCTATATCTGATGAGAGTGAGGAAGAGTCCAGAGCCTATGAATCACTTGATGTTTCTGATGAGGCCAATGCAGCTCCACCCACAGCCTCAGGAGGTAAACACAAGAAGAAAAGGCTCGGGAAGCGAAAATCCATTAACAGGTCTAAGAAAGGGATGTTTGGTACGTCAATGGACTATGAGTATAAGGATTTGTCTGATGATGGTGAGGAGGCCAGTGTGGAGATCATTGGTGAGGATTCAAATGATCCCATGAATTTTGATGATGTACATAGTGCAGGATCAAAGAATGGCAAGAAATCTGACCCAGTTGATCTGGAGGATAGTGATGATGACGTCGTGTATTTAGGCGAAGAGGGAGGCGAAGGAGGAAGGGGTTTCGGTTCTTTGAATTTGGAGACAAGTGATGCCAATGACGAGGTTGCTTCTGATGGCTCAGATGAATCTGAGGCAACTGAGGAGGTTGCTTCTGATGTTTCTAACAGCTCACATGATTCAGAGACCGTCCTATTTAGTGAAGAGGAAAGCGCTCATTCGGATGACGAGGATTATGACCCAGAAGAGTCAGAAAGTTCTGAGTTTTCTGAGGAGTCAAGTTCATCTGGTGGAGATGGCCAGTGGAGCGATGAAGGTGATGTTGATATGAAGAAGGGGGAGATTGTTAATAAAAGGGAGAAGAAAAAGGGTAGTGGGAAAACGAAGAAGGGGAAAAGTGTTGGGGACAATATTGAGGTGAATAAGGTGCATAATATTGATGAAGGGGAAGTTAAAAAGGGATTTAGAAAAGAGGGCAAGGGGAAAACTGTTGAGGGTGGTGTCGAGAAGAAGAAGGGGCAGCATTCTAGTAGAAAAGAAGATGTTACCGCTCTTCTATTGAAGTTCTGTTTTGGATCCAAGGAGCCAAGTGTACCAGAGAAGCCAGAACTAGATCCAGAAGAAAACGAACTTTGGGATGAATTTCGTTTTTCTCTCAGATCTTGTGAGATTGGTTCCACTGGATCTAATAAGGTTGGAAATCAAGATTCACTCCCCGCTGTTCATGAAGAGGATACTGCTACCCTTTGTAAACGAGGGAGTCATCAGCTTATACTCGATGAAGAGATTGGACTCCGATGCAAAATTTGCACTTACTTAGCCAAGGAGATCAAATATATTTTTCCAGAATTTGTTGAGAATCCTTACGAAAAATTTGGCAGAAGAGGCTTTGAAACTGACAACTGGTCTGTCTTTGATGAGCTCCGATCTCATGACTCTGGTTCCGGTCCCCATTCTGGTTGTAGTTCTCACCTTCCCGATGAAGGCACAGTGTGGGACTTCATTCCAGGTGTTAAAAGCAGCATGTATCCTCATCAGCGTGAAGGTTTTGAGTTCTTGTGGAATCATATAGCTGGTGGAATACATGTTGAGGAGCTGAAAAAAAGAAGCAGTGATTATGCTGGGAATGGTTGCATAATTTCACACGCTCCTGGAACTGGGAAGACACTGCTAGCCATTGTCTTTCTCCAGACATACATGCAGTTGTTCCCAAACTGCAGGCCACTTCTGATAGCTCCTCGCAGCATGTTGCTTACATGGGAAGAGGAGTTTCAAAAATGGGGGTTTGACATTCCTTTTCACAATCTAAACAACACTGACTTATCTGGTGAAGAAATTGAAGCAGAAGTTAATTTGGTGATGCGAATTGAAGGCCGGAAAAGCATAAACAGAGTAAAGAACAGCAGAATGTTGAAGTTGTGTTCCTGGACCAAGAAAAGAAGCATCCTGGGAATCAGTTACCAATTGTTTGAGAAGCTTTGTGGGACAAATCATTCTGGAGCACTGAAGCAAGCGGAGGAATGGAGGAAAATTATATTTGAGTTTCCTGGTCTTGTAGTATTCGATGAAGGGCACACTCCTCGGAATGATCAAAGTCGTATTTGGAAGGCTTTATCAGACCTCAAGACTAAAAGGCGCATTCTTCTGTCTGGAACTCCTTTCCAGAATAATTTTCAGGAGCTCTTCAATACAATCTGCCTGGTGAGGCCTACATTTGCAGACTCGATCGACTCTAATAAGTTCACTGGAGATTTTCGCAGAAACCAAAGCCAAAAAAGAAATTTAGAGACATGGCAATGGACTTCTGTGACCAACTGTAGTGGAAATATCAATAATAAAAGAGAAAGACATGCTACAGAGGTCAAAGCGAAGATTGCACCATTTGTCAATGAACTCAGTTGTTGTTCTACGCCCGACGCAACTACAGGAGGAGTTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

780

Amino Acids

87.0

Weight (kDa)

5.14

Isoelectric Point (pI)

51.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 474 - 687 6.6e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 478 - 726 2.5e-24 SNF2-related domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 423
AccBSI CCGCTC 1 cut(s) 950
AciI CCGC 4 cut(s) 66, 948, 1116, 1913
AclWI GGATC 6 cut(s) 326, 373, 969, 982, 1007, 1090
AcoI YGGCCR 2 cut(s) 63, 697
AcsI RAATTY 7 cut(s) 340, 475, 1040, 1203, 1247, 1271, 2179
AcuI CTGAAG 1 cut(s) 1925
AcyI GRCGYC 1 cut(s) 420
AdeI CACNNNGTG 1 cut(s) 1392
AfaI GTAC 4 cut(s) 83, 250, 354, 993
AfeI AGCGCT 1 cut(s) 613
AfiI CCNNNNNNNGG 4 cut(s) 225, 1355, 1382, 1556
AflIII ACRYGT 2 cut(s) 84, 1483
AgsI TTSAA 9 cut(s) 327, 475, 961, 1292, 1673, 1739, 1769, 1813, 2086
AhdI GACNNNNNGTC 1 cut(s) 1303
AjnI CCWGG 7 cut(s) 35, 1405, 1549, 1823, 1845, 1945, 2097
AluBI AGCT 9 cut(s) 161, 570, 1168, 1321, 1472, 1495, 1634, 1876, 2080
AluI AGCT 9 cut(s) 161, 570, 1168, 1321, 1472, 1495, 1634, 1876, 2080
Alw21I GWGCWC 3 cut(s) 1323, 1903, 2082
Alw26I GTCTC 3 cut(s) 476, 578, 2180
AlwI GGATC 6 cut(s) 326, 373, 969, 982, 1007, 1090
Ama87I CYCGRG 1 cut(s) 203
Aor51HI AGCGCT 1 cut(s) 613
AoxI GGCC 7 cut(s) 63, 150, 297, 697, 1619, 1771, 2105
ApeKI GCWGC 4 cut(s) 158, 919, 1419, 1641
ApoI RAATTY 7 cut(s) 340, 475, 1040, 1203, 1247, 1271, 2179
AspLEI GCGC 2 cut(s) 614, 2037
AspS9I GGNCC 2 cut(s) 1346, 1827
AsuHPI GGTGA 8 cut(s) 302, 329, 728, 829, 1361, 1739, 1768, 2113
AsuNHI GCTAGC 1 cut(s) 1570
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 2 cut(s) 1346, 1827
AxyI CCTNAGG 1 cut(s) 175
BaeGI GKGCMC 1 cut(s) 1974
BalI TGGCCA 1 cut(s) 699
BamHI GGATCC 1 cut(s) 974
BanII GRGCYC 2 cut(s) 1323, 2082
BbsI GAAGAC 1 cut(s) 1568
Bbv12I GWGCWC 3 cut(s) 1323, 1903, 2082
BbvI GCAGC 4 cut(s) 170, 931, 1431, 1653
BccI CCATC 3 cut(s) 281, 509, 689
BcgI CGANNNNNNTGC 2 cut(s) 1961, 1995
BciT130I CCWGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
BciVI GTATCC 2 cut(s) 1126, 1437
BclI TGATCA 1 cut(s) 1987
BcoDI GTCTC 3 cut(s) 476, 578, 2180
BfaI CTAG 3 cut(s) 927, 1010, 1571
BfmI CTRYAG 5 cut(s) 7, 1615, 2215, 2253, 2322
BfoI RGCGCY 1 cut(s) 615
BfuI GTATCC 2 cut(s) 1126, 1437
BglII AGATCT 1 cut(s) 1058
BisI GCNGC 5 cut(s) 66, 159, 920, 1420, 1642
BlsI GCNGC 5 cut(s) 67, 160, 921, 1421, 1643
Bme1390I CCNGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
Bme18I GGWCC 2 cut(s) 1346, 1827
BmeRI GACNNNNNGTC 1 cut(s) 1303
BmeT110I CYCGRG 1 cut(s) 203
BmgT120I GGNCC 2 cut(s) 1346, 1827
BmiI GGNNCC 5 cut(s) 976, 984, 1075, 1342, 1348
BmrFI CCNGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
BmrI ACTGGG 2 cut(s) 386, 1566
BmsI GCATC 4 cut(s) 481, 1187, 1749, 1851
BmtI GCTAGC 1 cut(s) 1574
BmuI ACTGGG 2 cut(s) 386, 1566
BpiI GAAGAC 1 cut(s) 1568
BplI GAGNNNNNCTC 2 cut(s) 44, 76
BpmI CTGGAG 4 cut(s) 422, 1571, 1917, 2166
BpuEI CTTGAG 1 cut(s) 2006
BsaAI YACGTR 1 cut(s) 85
BsaHI GRCGYC 1 cut(s) 420
BsaI GGTCTC 1 cut(s) 578
BsaJI CCNNGG 4 cut(s) 978, 1221, 1846, 1979
BsaWI WCCGGW 1 cut(s) 1343
Bsc4I CCNNNNNNNGG 4 cut(s) 225, 1355, 1382, 1556
Bse1I ACTGG 8 cut(s) 20, 300, 392, 700, 1084, 1307, 1561, 2149
Bse21I CCTNAGG 1 cut(s) 175
Bse3DI GCAATG 1 cut(s) 2201
BseBI CCWGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
BseDI CCNNGG 4 cut(s) 978, 1221, 1846, 1979
BseGI GGATG 4 cut(s) 246, 628, 1042, 1842
BseLI CCNNNNNNNGG 4 cut(s) 225, 1355, 1382, 1556
BseMI GCAATG 1 cut(s) 2201
BseMII CTCAG 8 cut(s) 189, 522, 531, 534, 651, 660, 1069, 2308
BseNI ACTGG 8 cut(s) 20, 300, 392, 700, 1084, 1307, 1561, 2149
BseRI GAGGAG 7 cut(s) 308, 557, 686, 1505, 1626, 1679, 1968
BseSI GKGCMC 1 cut(s) 1974
BseX3I CGGCCG 1 cut(s) 63
BseXI GCAGC 4 cut(s) 170, 931, 1431, 1653
BseYI CCCAGC 1 cut(s) 1520
BsgI GTGCAG 1 cut(s) 381
Bsh1285I CGRYCG 2 cut(s) 66, 2127
BshFI GGCC 7 cut(s) 65, 152, 299, 699, 1621, 1773, 2107
BsiEI CGRYCG 2 cut(s) 66, 2127
BsiHKAI GWGCWC 3 cut(s) 1323, 1903, 2082
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 2 cut(s) 1344, 1774
BslFI GGGAC 4 cut(s) 818, 1332, 1409, 1897
BslI CCNNNNNNNGG 4 cut(s) 225, 1355, 1382, 1556
BsmAI GTCTC 3 cut(s) 476, 578, 2180
BsmFI GGGAC 4 cut(s) 818, 1332, 1409, 1897
BsmI GAATGC 2 cut(s) 922, 2037
BsnI GGCC 7 cut(s) 65, 152, 299, 699, 1621, 1773, 2107
Bso31I GGTCTC 1 cut(s) 578
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 4 cut(s) 1323, 1903, 1974, 2082
Bsp1407I TGTACA 1 cut(s) 352
BspACI CCGC 4 cut(s) 66, 948, 1116, 1913
BspANI GGCC 7 cut(s) 65, 152, 299, 699, 1621, 1773, 2107
BspCNI CTCAG 8 cut(s) 188, 523, 532, 533, 652, 661, 1068, 2307
BspHI TCATGA 2 cut(s) 1123, 1330
BspLI GGNNCC 5 cut(s) 976, 984, 1075, 1342, 1348
BspMAI CTGCAG 1 cut(s) 1619
BspOI GCTAGC 1 cut(s) 1574
BspPI GGATC 6 cut(s) 326, 373, 969, 982, 1007, 1090
BspQI GCTCTTC 2 cut(s) 957, 2087
BspTNI GGTCTC 1 cut(s) 578
BsrBI CCGCTC 1 cut(s) 950
BsrDI GCAATG 1 cut(s) 2201
BsrGI TGTACA 1 cut(s) 352
BsrI ACTGG 8 cut(s) 20, 300, 392, 700, 1084, 1307, 1561, 2149
BssECI CCNNGG 4 cut(s) 978, 1221, 1846, 1979
BssNI GRCGYC 1 cut(s) 420
BssT1I CCWWGG 2 cut(s) 978, 1221
Bst2UI CCWGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
Bst4CI ACNGT 4 cut(s) 589, 889, 1390, 2216
BstACI GRCGYC 1 cut(s) 420
BstAPI GCANNNNNTGC 1 cut(s) 1206
BstAUI TGTACA 1 cut(s) 352
BstBAI YACGTR 1 cut(s) 85
BstC8I GCNNGC 3 cut(s) 1572, 1619, 1911
BstF5I GGATG 4 cut(s) 246, 628, 1042, 1842
BstH2I RGCGCY 1 cut(s) 615
BstHHI GCGC 2 cut(s) 614, 2037
BstMAI GTCTC 3 cut(s) 476, 578, 2180
BstMCI CGRYCG 2 cut(s) 66, 2127
BstMWI GCNNNNNNNGC 7 cut(s) 158, 208, 705, 1206, 1284, 1779, 2273
BstNI CCWGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
BstNSI RCATGY 5 cut(s) 1426, 1487, 1600, 1648, 2252
BstSCI CCNGG 7 cut(s) 35, 1405, 1549, 1823, 1845, 1945, 2097
BstSFI CTRYAG 5 cut(s) 7, 1615, 2215, 2253, 2322
BstSLI GKGCMC 1 cut(s) 1974
BstV1I GCAGC 4 cut(s) 170, 931, 1431, 1653
BstV2I GAAGAC 1 cut(s) 1568
BstX2I RGATCY 4 cut(s) 974, 1012, 1058, 1082
BstYI RGATCY 4 cut(s) 974, 1012, 1058, 1082
BstZI CGGCCG 1 cut(s) 63
Bsu36I CCTNAGG 1 cut(s) 175
BsuI GTATCC 2 cut(s) 1126, 1437
BsuRI GGCC 7 cut(s) 65, 152, 299, 699, 1621, 1773, 2107
BtgZI GCGATG 1 cut(s) 723
BtsCI GGATG 4 cut(s) 246, 628, 1042, 1842
BtsI GCAGTG 2 cut(s) 1516, 1565
BtsIMutI CAGTG 9 cut(s) 307, 707, 1077, 1395, 1516, 1565, 1713, 1901, 2142
Cac8I GCNNGC 3 cut(s) 1572, 1619, 1911
CciI TCATGA 2 cut(s) 1123, 1330
CfoI GCGC 2 cut(s) 614, 2037
Cfr13I GGNCC 2 cut(s) 1346, 1827
CseI GACGC 1 cut(s) 2324
Csp6I GTAC 4 cut(s) 82, 249, 353, 992
CspCI CAANNNNNGTGG 2 cut(s) 2200, 2235
CviQI GTAC 4 cut(s) 82, 249, 353, 992
DraIII CACNNNGTG 1 cut(s) 1392
DriI GACNNNNNGTC 1 cut(s) 1303
EaeI YGGCCR 2 cut(s) 63, 697
EagI CGGCCG 1 cut(s) 63
Eam1105I GACNNNNNGTC 1 cut(s) 1303
Ecl136II GAGCTC 2 cut(s) 1321, 2080
EclXI CGGCCG 1 cut(s) 63
Eco130I CCWWGG 2 cut(s) 978, 1221
Eco147I AGGCCT 1 cut(s) 2107
Eco24I GRGCYC 2 cut(s) 1323, 2082
Eco31I GGTCTC 1 cut(s) 578
Eco47I GGWCC 2 cut(s) 1346, 1827
Eco47III AGCGCT 1 cut(s) 613
Eco52I CGGCCG 1 cut(s) 63
Eco53kI GAGCTC 2 cut(s) 1321, 2080
Eco57I CTGAAG 1 cut(s) 1925
Eco81I CCTNAGG 1 cut(s) 175
Eco88I CYCGRG 1 cut(s) 203
EcoICRI GAGCTC 2 cut(s) 1321, 2080
EcoRII CCWGG 7 cut(s) 35, 1405, 1549, 1823, 1845, 1945, 2097
EcoT14I CCWWGG 2 cut(s) 978, 1221
EcoT38I GRGCYC 2 cut(s) 1323, 2082
ErhI CCWWGG 2 cut(s) 978, 1221
FaqI GGGAC 4 cut(s) 818, 1332, 1409, 1897
FauI CCCGC 1 cut(s) 1123
FbaI TGATCA 1 cut(s) 1987
Fnu4HI GCNGC 5 cut(s) 66, 159, 920, 1420, 1642
FokI GGATG 4 cut(s) 253, 635, 1049, 1829
FriOI GRGCYC 2 cut(s) 1323, 2082
Fsp4HI GCNGC 5 cut(s) 66, 159, 920, 1420, 1642
FspBI CTAG 3 cut(s) 927, 1010, 1571
GlaI GCGC 2 cut(s) 613, 2036
GluI GCNGC 5 cut(s) 66, 159, 920, 1420, 1642
GsaI CCCAGC 1 cut(s) 1524
GsuI CTGGAG 4 cut(s) 422, 1571, 1917, 2166
HaeII RGCGCY 1 cut(s) 615
HaeIII GGCC 7 cut(s) 65, 152, 299, 699, 1621, 1773, 2107
HapII CCGG 2 cut(s) 1344, 1774
HgaI GACGC 1 cut(s) 2324
HhaI GCGC 2 cut(s) 614, 2037
Hin1I GRCGYC 1 cut(s) 420
Hin6I GCGC 2 cut(s) 612, 2035
HinP1I GCGC 2 cut(s) 612, 2035
HindIII AAGCTT 1 cut(s) 1874
HpaII CCGG 2 cut(s) 1344, 1774
HphI GGTGA 8 cut(s) 302, 329, 728, 829, 1361, 1739, 1768, 2113
Hpy166II GTNNAC 4 cut(s) 185, 992, 1151, 2142
Hpy8I GTNNAC 4 cut(s) 185, 992, 1151, 2142
Hpy99I CGWCG 2 cut(s) 425, 2318
HpyCH4III ACNGT 4 cut(s) 589, 889, 1390, 2216
HpyCH4IV ACGT 3 cut(s) 84, 251, 420
HpyF10VI GCNNNNNNNGC 7 cut(s) 158, 208, 705, 1206, 1284, 1779, 2273
HpySE526I ACGT 3 cut(s) 84, 251, 420
Hsp92I GRCGYC 1 cut(s) 420
HspAI GCGC 2 cut(s) 612, 2035
Ksp22I TGATCA 1 cut(s) 1987
LguI GCTCTTC 2 cut(s) 957, 2087
LmnI GCTCC 9 cut(s) 166, 705, 982, 1326, 1492, 1552, 1639, 1898, 2077
Lsp1109I GCAGC 4 cut(s) 170, 931, 1431, 1653
LweI GCATC 4 cut(s) 481, 1187, 1749, 1851
MaeI CTAG 3 cut(s) 927, 1010, 1571
MaeII ACGT 3 cut(s) 84, 251, 420
MaeIII GTNAC 3 cut(s) 943, 1856, 2206
MbiI CCGCTC 1 cut(s) 950
MfeI CAATTG 1 cut(s) 1862
MflI RGATCY 4 cut(s) 974, 1012, 1058, 1082
MhlI GDGCHC 4 cut(s) 1323, 1903, 1974, 2082
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 9 cut(s) 82, 122, 656, 683, 1168, 1185, 1328, 2114, 2123
MmeI TCCRAC 1 cut(s) 1075
Mox20I TGGCCA 1 cut(s) 699
MscI TGGCCA 1 cut(s) 699
MseI TTAA 5 cut(s) 222, 747, 852, 1413, 1749
MslI CAYNNNNRTG 3 cut(s) 621, 1437, 2194
Msp20I TGGCCA 1 cut(s) 699
MspA1I CMGCKG 2 cut(s) 68, 1118
MspI CCGG 2 cut(s) 1344, 1774
MspR9I CCNGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
MunI CAATTG 1 cut(s) 1862
Mva1269I GAATGC 2 cut(s) 922, 2037
MvaI CCWGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
MwoI GCNNNNNNNGC 7 cut(s) 158, 208, 705, 1206, 1284, 1779, 2273
NheI GCTAGC 1 cut(s) 1570
NlaIV GGNNCC 5 cut(s) 976, 984, 1075, 1342, 1348
NmeAIII GCCGAG 1 cut(s) 41
NmuCI GTSAC 1 cut(s) 2206
NspI RCATGY 5 cut(s) 1426, 1487, 1600, 1648, 2252
PagI TCATGA 2 cut(s) 1123, 1330
PceI AGGCCT 1 cut(s) 2107
PciI ACATGT 1 cut(s) 1483
PciSI GCTCTTC 2 cut(s) 957, 2087
PctI GAATGC 2 cut(s) 922, 2037
PfeI GAWTC 9 cut(s) 46, 128, 323, 527, 578, 1106, 1258, 1462, 1851
PfoI TCCNGGA 2 cut(s) 1549, 1823
PkrI GCNGC 5 cut(s) 67, 160, 921, 1421, 1643
Ple19I CGATCG 1 cut(s) 2127
PleI GAGTC 9 cut(s) 81, 121, 655, 682, 1167, 1185, 1328, 2114, 2123
PpsI GAGTC 9 cut(s) 81, 121, 655, 682, 1167, 1185, 1328, 2114, 2123
Ppu21I YACGTR 1 cut(s) 85
PscI ACATGT 1 cut(s) 1483
Psp124BI GAGCTC 2 cut(s) 1323, 2082
Psp6I CCWGG 7 cut(s) 35, 1405, 1549, 1823, 1845, 1945, 2097
PspFI CCCAGC 1 cut(s) 1520
PspGI CCWGG 7 cut(s) 35, 1405, 1549, 1823, 1845, 1945, 2097
PspN4I GGNNCC 5 cut(s) 976, 984, 1075, 1342, 1348
PspPI GGNCC 2 cut(s) 1346, 1827
PstI CTGCAG 1 cut(s) 1619
PsuI RGATCY 4 cut(s) 974, 1012, 1058, 1082
PvuI CGATCG 1 cut(s) 2127
RsaI GTAC 4 cut(s) 83, 250, 354, 993
RsaNI GTAC 4 cut(s) 82, 249, 353, 992
RseI CAYNNNNRTG 3 cut(s) 621, 1437, 2194
SacI GAGCTC 2 cut(s) 1323, 2082
SapI GCTCTTC 2 cut(s) 957, 2087
SaqAI TTAA 5 cut(s) 222, 747, 852, 1413, 1749
SatI GCNGC 5 cut(s) 66, 159, 920, 1420, 1642
Sau96I GGNCC 2 cut(s) 1346, 1827
SchI GAGTC 9 cut(s) 82, 122, 656, 683, 1168, 1185, 1328, 2114, 2123
ScrFI CCNGG 7 cut(s) 37, 1407, 1551, 1825, 1847, 1947, 2099
SduI GDGCHC 4 cut(s) 1323, 1903, 1974, 2082
SfaNI GCATC 4 cut(s) 481, 1187, 1749, 1851
SfcI CTRYAG 5 cut(s) 7, 1615, 2215, 2253, 2322
SinI GGWCC 2 cut(s) 1346, 1827
SmiMI CAYNNNNRTG 3 cut(s) 621, 1437, 2194
SmlI CTYRAG 1 cut(s) 2021
SmoI CTYRAG 1 cut(s) 2021
SseBI AGGCCT 1 cut(s) 2107
SsiI CCGC 4 cut(s) 66, 948, 1116, 1913
SspI AATATT 2 cut(s) 811, 835
SspMI CTAG 3 cut(s) 927, 1010, 1571
SstI GAGCTC 2 cut(s) 1323, 2082
StuI AGGCCT 1 cut(s) 2107
StyD4I CCNGG 7 cut(s) 35, 1405, 1549, 1823, 1845, 1945, 2097
StyI CCWWGG 2 cut(s) 978, 1221
TaaI ACNGT 4 cut(s) 589, 889, 1390, 2216
TaiI ACGT 3 cut(s) 87, 254, 423
TaqI TCGA 6 cut(s) 76, 903, 1176, 1962, 2123, 2127
TatI WGTACW 1 cut(s) 352
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 9 cut(s) 46, 128, 323, 527, 578, 1106, 1258, 1462, 1851
Tru1I TTAA 5 cut(s) 222, 747, 852, 1413, 1749
Tru9I TTAA 5 cut(s) 222, 747, 852, 1413, 1749
TscAI CASTG 9 cut(s) 307, 707, 1084, 1395, 1516, 1572, 1720, 1908, 2149
TseFI GTSAC 1 cut(s) 2206
TseI GCWGC 4 cut(s) 158, 919, 1419, 1641
Tsp45I GTSAC 1 cut(s) 2206
TspRI CASTG 9 cut(s) 307, 707, 1084, 1395, 1516, 1572, 1720, 1908, 2149
VpaK11BI GGWCC 2 cut(s) 1346, 1827
XapI RAATTY 7 cut(s) 340, 475, 1040, 1203, 1247, 1271, 2179
XceI RCATGY 5 cut(s) 1426, 1487, 1600, 1648, 2252
XspI CTAG 3 cut(s) 927, 1010, 1571
ZraI GACGTC 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.