SNF2 domain-containing protein CLASSY
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 765, 3151, 3449 |
| AccB1I | GGYRCC | 2 cut(s) | 1666, 3602 |
| AccIII | TCCGGA | 1 cut(s) | 2071 |
| AciI | CCGC | 3 cut(s) | 1385, 3406, 4364 |
| AclI | AACGTT | 1 cut(s) | 61 |
| AclWI | GGATC | 3 cut(s) | 2695, 3932, 4058 |
| AcoI | YGGCCR | 2 cut(s) | 1032, 1215 |
| AcsI | RAATTY | 6 cut(s) | 1814, 2009, 2750, 2896, 3251, 3483 |
| AcuI | CTGAAG | 8 cut(s) | 336, 1914, 2019, 2391, 2615, 2700, 3125, 3789 |
| AdeI | CACNNNGTG | 1 cut(s) | 2691 |
| AfaI | GTAC | 7 cut(s) | 1927, 2550, 2726, 2891, 2938, 3364, 4149 |
| AfeI | AGCGCT | 1 cut(s) | 3776 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 87, 165, 2710, 2852, 2953, 3851, 4363 |
| AgeI | ACCGGT | 1 cut(s) | 2610 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2611 |
| AjnI | CCWGG | 8 cut(s) | 129, 577, 2232, 2704, 2845, 3110, 3256, 3625 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1086, 1118, 1212, 1244, 1269, 1301 |
| Alw21I | GWGCWC | 1 cut(s) | 3393 |
| Alw26I | GTCTC | 2 cut(s) | 1907, 2045 |
| AlwI | GGATC | 3 cut(s) | 2695, 3932, 4058 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1937, 2318 |
| Ama87I | CYCGRG | 1 cut(s) | 4197 |
| Aor13HI | TCCGGA | 1 cut(s) | 2071 |
| Aor51HI | AGCGCT | 1 cut(s) | 3776 |
| AoxI | GGCC | 8 cut(s) | 11, 525, 1032, 1215, 1857, 2915, 3416, 3523 |
| ApeKI | GCWGC | 5 cut(s) | 347, 792, 1750, 3038, 4399 |
| ApoI | RAATTY | 6 cut(s) | 1814, 2009, 2750, 2896, 3251, 3483 |
| AseI | ATTAAT | 3 cut(s) | 945, 1173, 2025 |
| AsiGI | ACCGGT | 1 cut(s) | 2610 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1722, 3243, 3710 |
| AspLEI | GCGC | 2 cut(s) | 3348, 3777 |
| AspS9I | GGNCC | 4 cut(s) | 123, 2916, 3426, 3478 |
| AsuC2I | CCSGG | 1 cut(s) | 2427 |
| AsuHPI | GGTGA | 8 cut(s) | 103, 1145, 1328, 2110, 2831, 3424, 3806, 3821 |
| AsuII | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| AvaI | CYCGRG | 1 cut(s) | 4197 |
| AvaII | GGWCC | 3 cut(s) | 123, 3426, 3478 |
| BaeGI | GKGCMC | 3 cut(s) | 1661, 1669, 3285 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 870, 903, 2491, 2524 |
| BanI | GGYRCC | 2 cut(s) | 1666, 3602 |
| BanII | GRGCYC | 3 cut(s) | 1978, 3175, 3393 |
| BauI | CACGAG | 1 cut(s) | 1660 |
| BbsI | GAAGAC | 4 cut(s) | 83, 2046, 2610, 4222 |
| Bbv12I | GWGCWC | 1 cut(s) | 3393 |
| BbvI | GCAGC | 5 cut(s) | 334, 804, 1762, 3050, 4411 |
| BceAI | ACGGC | 2 cut(s) | 512, 1453 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1958, 1992, 3272, 3306 |
| BciT130I | CCWGG | 8 cut(s) | 131, 579, 2234, 2706, 2847, 3112, 3258, 3627 |
| BciVI | GTATCC | 2 cut(s) | 1887, 2492 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BcnI | CCSGG | 1 cut(s) | 2427 |
| BcoDI | GTCTC | 2 cut(s) | 1907, 2045 |
| BfaI | CTAG | 4 cut(s) | 165, 920, 1521, 2330 |
| BfmI | CTRYAG | 2 cut(s) | 1689, 3653 |
| BfoI | RGCGCY | 1 cut(s) | 3778 |
| BfuAI | ACCTGC | 3 cut(s) | 765, 3151, 3449 |
| BfuI | GTATCC | 2 cut(s) | 1887, 2492 |
| BisI | GCNGC | 5 cut(s) | 348, 793, 1751, 3039, 4400 |
| BlsI | GCNGC | 5 cut(s) | 349, 794, 1752, 3040, 4401 |
| Bme1390I | CCNGG | 9 cut(s) | 131, 579, 2234, 2427, 2706, 2847, 3112, 3258, 3627 |
| Bme18I | GGWCC | 3 cut(s) | 123, 3426, 3478 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2611 |
| BmeT110I | CYCGRG | 1 cut(s) | 4197 |
| BmgT120I | GGNCC | 4 cut(s) | 123, 2916, 3426, 3478 |
| BmiI | GGNNCC | 6 cut(s) | 1668, 2383, 2918, 3172, 3604, 4169 |
| BmrFI | CCNGG | 9 cut(s) | 131, 579, 2234, 2427, 2706, 2847, 3112, 3258, 3627 |
| BmrI | ACTGGG | 5 cut(s) | 1056, 1385, 1569, 3030, 3823 |
| BmsI | GCATC | 7 cut(s) | 1864, 2536, 2816, 3138, 4015, 4306, 4333 |
| BmuI | ACTGGG | 5 cut(s) | 1056, 1385, 1569, 3030, 3823 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3303 |
| BpiI | GAAGAC | 4 cut(s) | 83, 2046, 2610, 4222 |
| BpmI | CTGGAG | 2 cut(s) | 361, 2779 |
| Bpu14I | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| BpuEI | CTTGAG | 2 cut(s) | 222, 4397 |
| BpuMI | CCSGG | 1 cut(s) | 2427 |
| Bsa29I | ATCGAT | 1 cut(s) | 990 |
| BsaAI | YACGTR | 1 cut(s) | 2936 |
| BsaJI | CCNNGG | 8 cut(s) | 578, 2232, 2461, 2704, 3111, 3445, 3555, 3626 |
| BsaWI | WCCGGW | 2 cut(s) | 2071, 2610 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 87, 165, 2710, 2852, 2953, 3851, 4363 |
| Bse118I | RCCGGY | 2 cut(s) | 2610, 4281 |
| Bse3DI | GCAATG | 5 cut(s) | 2152, 3301, 3473, 3517, 4092 |
| BseAI | TCCGGA | 1 cut(s) | 2071 |
| BseBI | CCWGG | 8 cut(s) | 131, 579, 2234, 2706, 2847, 3112, 3258, 3627 |
| BseCI | ATCGAT | 1 cut(s) | 990 |
| BseDI | CCNNGG | 8 cut(s) | 578, 2232, 2461, 2704, 3111, 3445, 3555, 3626 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 87, 165, 2710, 2852, 2953, 3851, 4363 |
| BseMI | GCAATG | 5 cut(s) | 2152, 3301, 3473, 3517, 4092 |
| BseMII | CTCAG | 5 cut(s) | 1755, 2310, 2456, 3654, 3986 |
| BseSI | GKGCMC | 3 cut(s) | 1661, 1669, 3285 |
| BseXI | GCAGC | 5 cut(s) | 334, 804, 1762, 3050, 4411 |
| BseYI | CCCAGC | 3 cut(s) | 2582, 3515, 4253 |
| BsgI | GTGCAG | 3 cut(s) | 1988, 2283, 4418 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4368 |
| BshFI | GGCC | 8 cut(s) | 13, 527, 1034, 1217, 1859, 2917, 3418, 3525 |
| BshNI | GGYRCC | 2 cut(s) | 1666, 3602 |
| BshTI | ACCGGT | 1 cut(s) | 2610 |
| BshVI | ATCGAT | 1 cut(s) | 990 |
| BsiEI | CGRYCG | 1 cut(s) | 4368 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3393 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4197 |
| BsiSI | CCGG | 4 cut(s) | 2072, 2427, 2611, 4282 |
| BslFI | GGGAC | 3 cut(s) | 2708, 3971, 4227 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 87, 165, 2710, 2852, 2953, 3851, 4363 |
| BsmAI | GTCTC | 2 cut(s) | 1907, 2045 |
| BsmBI | CGTCTC | 1 cut(s) | 1907 |
| BsmFI | GGGAC | 3 cut(s) | 2708, 3971, 4227 |
| BsmI | GAATGC | 5 cut(s) | 760, 859, 1619, 1843, 3322 |
| BsnI | GGCC | 8 cut(s) | 13, 527, 1034, 1217, 1859, 2917, 3418, 3525 |
| BsoBI | CYCGRG | 1 cut(s) | 4197 |
| Bsp119I | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1661, 1669, 1978, 3175, 3285, 3393 |
| Bsp13I | TCCGGA | 1 cut(s) | 2071 |
| BspACI | CCGC | 3 cut(s) | 1385, 3406, 4364 |
| BspANI | GGCC | 8 cut(s) | 13, 527, 1034, 1217, 1859, 2917, 3418, 3525 |
| BspCNI | CTCAG | 5 cut(s) | 1756, 2311, 2455, 3653, 3985 |
| BspDI | ATCGAT | 1 cut(s) | 990 |
| BspEI | TCCGGA | 1 cut(s) | 2071 |
| BspHI | TCATGA | 6 cut(s) | 775, 874, 982, 1165, 1348, 3787 |
| BspLI | GGNNCC | 6 cut(s) | 1668, 2383, 2918, 3172, 3604, 4169 |
| BspMI | ACCTGC | 3 cut(s) | 765, 3151, 3449 |
| BspPI | GGATC | 3 cut(s) | 2695, 3932, 4058 |
| BspQI | GCTCTTC | 1 cut(s) | 3765 |
| BspT104I | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| BspT107I | GGYRCC | 2 cut(s) | 1666, 3602 |
| BsrDI | GCAATG | 5 cut(s) | 2152, 3301, 3473, 3517, 4092 |
| BsrFI | RCCGGY | 2 cut(s) | 2610, 4281 |
| BssAI | RCCGGY | 2 cut(s) | 2610, 4281 |
| BssECI | CCNNGG | 8 cut(s) | 578, 2232, 2461, 2704, 3111, 3445, 3555, 3626 |
| BssSI | CACGAG | 1 cut(s) | 1660 |
| BssT1I | CCWWGG | 3 cut(s) | 2461, 3445, 3555 |
| Bst2BI | CACGAG | 1 cut(s) | 1660 |
| Bst2UI | CCWGG | 8 cut(s) | 131, 579, 2234, 2706, 2847, 3112, 3258, 3627 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3869 |
| BstBAI | YACGTR | 1 cut(s) | 2936 |
| BstBI | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| BstC8I | GCNNGC | 7 cut(s) | 1978, 2841, 2915, 3043, 3552, 4188, 4283 |
| BstDEI | CTNAG | 8 cut(s) | 1746, 1764, 1854, 2319, 2442, 2767, 3640, 3972 |
| BstEII | GGTNACC | 1 cut(s) | 1683 |
| BstH2I | RGCGCY | 1 cut(s) | 3778 |
| BstHHI | GCGC | 2 cut(s) | 3348, 3777 |
| BstMAI | GTCTC | 2 cut(s) | 1907, 2045 |
| BstMCI | CGRYCG | 1 cut(s) | 4368 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1703, 3498, 3507, 3619, 3869, 4091 |
| BstNI | CCWGG | 8 cut(s) | 131, 579, 2234, 2706, 2847, 3112, 3258, 3627 |
| BstNSI | RCATGY | 3 cut(s) | 2843, 3593, 3964 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3303 |
| BstPI | GGTNACC | 1 cut(s) | 1683 |
| BstSCI | CCNGG | 9 cut(s) | 129, 577, 2232, 2425, 2704, 2845, 3110, 3256, 3625 |
| BstSFI | CTRYAG | 2 cut(s) | 1689, 3653 |
| BstSLI | GKGCMC | 3 cut(s) | 1661, 1669, 3285 |
| BstV1I | GCAGC | 5 cut(s) | 334, 804, 1762, 3050, 4411 |
| BstV2I | GAAGAC | 4 cut(s) | 83, 2046, 2610, 4222 |
| Bsu15I | ATCGAT | 1 cut(s) | 990 |
| BsuI | GTATCC | 2 cut(s) | 1887, 2492 |
| BsuRI | GGCC | 8 cut(s) | 13, 527, 1034, 1217, 1859, 2917, 3418, 3525 |
| BsuTUI | ATCGAT | 1 cut(s) | 990 |
| BtsI | GCAGTG | 1 cut(s) | 1447 |
| BveI | ACCTGC | 3 cut(s) | 765, 3151, 3449 |
| Cac8I | GCNNGC | 7 cut(s) | 1978, 2841, 2915, 3043, 3552, 4188, 4283 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1937, 2318 |
| CciI | TCATGA | 6 cut(s) | 775, 874, 982, 1165, 1348, 3787 |
| CfoI | GCGC | 2 cut(s) | 3348, 3777 |
| Cfr10I | RCCGGY | 2 cut(s) | 2610, 4281 |
| Cfr13I | GGNCC | 4 cut(s) | 123, 2916, 3426, 3478 |
| ClaI | ATCGAT | 1 cut(s) | 990 |
| CseI | GACGC | 1 cut(s) | 1924 |
| Csp6I | GTAC | 7 cut(s) | 1926, 2549, 2725, 2890, 2937, 3363, 4148 |
| CspAI | ACCGGT | 1 cut(s) | 2610 |
| CviQI | GTAC | 7 cut(s) | 1926, 2549, 2725, 2890, 2937, 3363, 4148 |
| DdeI | CTNAG | 8 cut(s) | 1746, 1764, 1854, 2319, 2442, 2767, 3640, 3972 |
| DraI | TTTAAA | 1 cut(s) | 3327 |
| DraIII | CACNNNGTG | 1 cut(s) | 2691 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2611 |
| EaeI | YGGCCR | 2 cut(s) | 1032, 1215 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2611 |
| Ecl136II | GAGCTC | 1 cut(s) | 3391 |
| Eco130I | CCWWGG | 3 cut(s) | 2461, 3445, 3555 |
| Eco147I | AGGCCT | 1 cut(s) | 13 |
| Eco24I | GRGCYC | 3 cut(s) | 1978, 3175, 3393 |
| Eco32I | GATATC | 1 cut(s) | 988 |
| Eco47I | GGWCC | 3 cut(s) | 123, 3426, 3478 |
| Eco47III | AGCGCT | 1 cut(s) | 3776 |
| Eco53kI | GAGCTC | 1 cut(s) | 3391 |
| Eco57I | CTGAAG | 8 cut(s) | 336, 1914, 2019, 2391, 2615, 2700, 3125, 3789 |
| Eco88I | CYCGRG | 1 cut(s) | 4197 |
| Eco91I | GGTNACC | 1 cut(s) | 1683 |
| EcoICRI | GAGCTC | 1 cut(s) | 3391 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2916 |
| EcoO65I | GGTNACC | 1 cut(s) | 1683 |
| EcoRII | CCWGG | 8 cut(s) | 129, 577, 2232, 2704, 2845, 3110, 3256, 3625 |
| EcoRV | GATATC | 1 cut(s) | 988 |
| EcoT14I | CCWWGG | 3 cut(s) | 2461, 3445, 3555 |
| EcoT22I | ATGCAT | 1 cut(s) | 2831 |
| EcoT38I | GRGCYC | 3 cut(s) | 1978, 3175, 3393 |
| ErhI | CCWWGG | 3 cut(s) | 2461, 3445, 3555 |
| Esp3I | CGTCTC | 1 cut(s) | 1907 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3606, 3638, 4214, 4246 |
| FaqI | GGGAC | 3 cut(s) | 2708, 3971, 4227 |
| FauI | CCCGC | 1 cut(s) | 1378 |
| FauNDI | CATATG | 5 cut(s) | 147, 1828, 2056, 2448, 2504 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| Fnu4HI | GCNGC | 5 cut(s) | 348, 793, 1751, 3039, 4400 |
| FriOI | GRGCYC | 3 cut(s) | 1978, 3175, 3393 |
| Fsp4HI | GCNGC | 5 cut(s) | 348, 793, 1751, 3039, 4400 |
| FspBI | CTAG | 4 cut(s) | 165, 920, 1521, 2330 |
| GlaI | GCGC | 2 cut(s) | 3347, 3776 |
| GluI | GCNGC | 5 cut(s) | 348, 793, 1751, 3039, 4400 |
| GsaI | CCCAGC | 3 cut(s) | 2586, 3519, 4257 |
| GsuI | CTGGAG | 2 cut(s) | 361, 2779 |
| HaeII | RGCGCY | 1 cut(s) | 3778 |
| HaeIII | GGCC | 8 cut(s) | 13, 527, 1034, 1217, 1859, 2917, 3418, 3525 |
| HapII | CCGG | 4 cut(s) | 2072, 2427, 2611, 4282 |
| HgaI | GACGC | 1 cut(s) | 1924 |
| HhaI | GCGC | 2 cut(s) | 3348, 3777 |
| Hin6I | GCGC | 2 cut(s) | 3346, 3775 |
| HinP1I | GCGC | 2 cut(s) | 3346, 3775 |
| HindIII | AAGCTT | 1 cut(s) | 3620 |
| HpaII | CCGG | 4 cut(s) | 2072, 2427, 2611, 4282 |
| HphI | GGTGA | 8 cut(s) | 103, 1145, 1328, 2110, 2831, 3424, 3806, 3821 |
| Hpy166II | GTNNAC | 3 cut(s) | 591, 1958, 3595 |
| Hpy8I | GTNNAC | 3 cut(s) | 591, 1958, 3595 |
| HpyCH4IV | ACGT | 3 cut(s) | 61, 1573, 2935 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1703, 3498, 3507, 3619, 3869, 4091 |
| HpyF3I | CTNAG | 8 cut(s) | 1746, 1764, 1854, 2319, 2442, 2767, 3640, 3972 |
| HpySE526I | ACGT | 3 cut(s) | 61, 1573, 2935 |
| HspAI | GCGC | 2 cut(s) | 3346, 3775 |
| Kpn2I | TCCGGA | 1 cut(s) | 2071 |
| KroI | GCCGGC | 1 cut(s) | 4281 |
| KroNI | GCCGGC | 1 cut(s) | 4283 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| LguI | GCTCTTC | 1 cut(s) | 3765 |
| LmnI | GCTCC | 9 cut(s) | 2104, 2248, 2566, 2935, 2949, 3170, 3388, 3449, 4133 |
| Lsp1109I | GCAGC | 5 cut(s) | 334, 804, 1762, 3050, 4411 |
| LweI | GCATC | 7 cut(s) | 1864, 2536, 2816, 3138, 4015, 4306, 4333 |
| MaeI | CTAG | 4 cut(s) | 165, 920, 1521, 2330 |
| MaeII | ACGT | 3 cut(s) | 61, 1573, 2935 |
| MaeIII | GTNAC | 9 cut(s) | 509, 557, 1683, 2205, 2437, 3305, 3739, 3794, 3809 |
| MhlI | GDGCHC | 6 cut(s) | 1661, 1669, 1978, 3175, 3285, 3393 |
| MlyI | GAGTC | 8 cut(s) | 103, 164, 596, 1511, 2408, 2854, 3313, 3864 |
| MmeI | TCCRAC | 4 cut(s) | 150, 1549, 2775, 4111 |
| Mph1103I | ATGCAT | 1 cut(s) | 2831 |
| MroI | TCCGGA | 1 cut(s) | 2071 |
| MroNI | GCCGGC | 1 cut(s) | 4281 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1722, 3243, 3710 |
| MslI | CAYNNNNRTG | 3 cut(s) | 150, 2736, 3792 |
| MspI | CCGG | 4 cut(s) | 2072, 2427, 2611, 4282 |
| MspR9I | CCNGG | 9 cut(s) | 131, 579, 2234, 2427, 2706, 2847, 3112, 3258, 3627 |
| Mva1269I | GAATGC | 5 cut(s) | 760, 859, 1619, 1843, 3322 |
| MvaI | CCWGG | 8 cut(s) | 131, 579, 2234, 2706, 2847, 3112, 3258, 3627 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1703, 3498, 3507, 3619, 3869, 4091 |
| NaeI | GCCGGC | 1 cut(s) | 4283 |
| NciI | CCSGG | 1 cut(s) | 2427 |
| NdeI | CATATG | 5 cut(s) | 147, 1828, 2056, 2448, 2504 |
| NgoMIV | GCCGGC | 1 cut(s) | 4281 |
| NlaIV | GGNNCC | 6 cut(s) | 1668, 2383, 2918, 3172, 3604, 4169 |
| NmuCI | GTSAC | 4 cut(s) | 557, 3305, 3794, 3809 |
| NsiI | ATGCAT | 1 cut(s) | 2831 |
| NspI | RCATGY | 3 cut(s) | 2843, 3593, 3964 |
| NspV | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| PaeI | GCATGC | 1 cut(s) | 2843 |
| PagI | TCATGA | 6 cut(s) | 775, 874, 982, 1165, 1348, 3787 |
| PceI | AGGCCT | 1 cut(s) | 13 |
| PciSI | GCTCTTC | 1 cut(s) | 3765 |
| PctI | GAATGC | 5 cut(s) | 760, 859, 1619, 1843, 3322 |
| PdiI | GCCGGC | 1 cut(s) | 4283 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1722, 3243, 3710 |
| PflFI | GACNNNGTC | 1 cut(s) | 2357 |
| PinAI | ACCGGT | 1 cut(s) | 2610 |
| PkrI | GCNGC | 5 cut(s) | 349, 794, 1752, 3040, 4401 |
| PleI | GAGTC | 8 cut(s) | 102, 163, 595, 1510, 2408, 2854, 3312, 3863 |
| PpsI | GAGTC | 8 cut(s) | 102, 163, 595, 1510, 2408, 2854, 3312, 3863 |
| Ppu21I | YACGTR | 1 cut(s) | 2936 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3303 |
| PshBI | ATTAAT | 3 cut(s) | 945, 1173, 2025 |
| Psp124BI | GAGCTC | 1 cut(s) | 3393 |
| Psp1406I | AACGTT | 1 cut(s) | 61 |
| Psp6I | CCWGG | 8 cut(s) | 129, 577, 2232, 2704, 2845, 3110, 3256, 3625 |
| PspEI | GGTNACC | 1 cut(s) | 1683 |
| PspFI | CCCAGC | 3 cut(s) | 2582, 3515, 4253 |
| PspGI | CCWGG | 8 cut(s) | 129, 577, 2232, 2704, 2845, 3110, 3256, 3625 |
| PspN4I | GGNNCC | 6 cut(s) | 1668, 2383, 2918, 3172, 3604, 4169 |
| PspPI | GGNCC | 4 cut(s) | 123, 2916, 3426, 3478 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1937, 2318 |
| PsyI | GACNNNGTC | 1 cut(s) | 2357 |
| RsaI | GTAC | 7 cut(s) | 1927, 2550, 2726, 2891, 2938, 3364, 4149 |
| RsaNI | GTAC | 7 cut(s) | 1926, 2549, 2725, 2890, 2937, 3363, 4148 |
| RseI | CAYNNNNRTG | 3 cut(s) | 150, 2736, 3792 |
| SacI | GAGCTC | 1 cut(s) | 3393 |
| SapI | GCTCTTC | 1 cut(s) | 3765 |
| SatI | GCNGC | 5 cut(s) | 348, 793, 1751, 3039, 4400 |
| Sau96I | GGNCC | 4 cut(s) | 123, 2916, 3426, 3478 |
| SchI | GAGTC | 8 cut(s) | 103, 164, 596, 1511, 2408, 2854, 3313, 3864 |
| ScrFI | CCNGG | 9 cut(s) | 131, 579, 2234, 2427, 2706, 2847, 3112, 3258, 3627 |
| SduI | GDGCHC | 6 cut(s) | 1661, 1669, 1978, 3175, 3285, 3393 |
| SfaNI | GCATC | 7 cut(s) | 1864, 2536, 2816, 3138, 4015, 4306, 4333 |
| SfcI | CTRYAG | 2 cut(s) | 1689, 3653 |
| SfuI | TTCGAA | 4 cut(s) | 1115, 1298, 3219, 4328 |
| SinI | GGWCC | 3 cut(s) | 123, 3426, 3478 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 150, 2736, 3792 |
| SmlI | CTYRAG | 2 cut(s) | 237, 4412 |
| SmoI | CTYRAG | 2 cut(s) | 237, 4412 |
| SphI | GCATGC | 1 cut(s) | 2843 |
| SseBI | AGGCCT | 1 cut(s) | 13 |
| SsiI | CCGC | 3 cut(s) | 1385, 3406, 4364 |
| SspMI | CTAG | 4 cut(s) | 165, 920, 1521, 2330 |
| SstI | GAGCTC | 1 cut(s) | 3393 |
| StuI | AGGCCT | 1 cut(s) | 13 |
| StyD4I | CCNGG | 9 cut(s) | 129, 577, 2232, 2425, 2704, 2845, 3110, 3256, 3625 |
| StyI | CCWWGG | 3 cut(s) | 2461, 3445, 3555 |
| TaiI | ACGT | 3 cut(s) | 64, 1576, 2938 |
| TatI | WGTACW | 1 cut(s) | 4147 |
| TseFI | GTSAC | 4 cut(s) | 557, 3305, 3794, 3809 |
| TseI | GCWGC | 5 cut(s) | 347, 792, 1750, 3038, 4399 |
| Tsp45I | GTSAC | 4 cut(s) | 557, 3305, 3794, 3809 |
| TspGWI | ACGGA | 1 cut(s) | 1690 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2357 |
| VpaK11BI | GGWCC | 3 cut(s) | 123, 3426, 3478 |
| VspI | ATTAAT | 3 cut(s) | 945, 1173, 2025 |
| XapI | RAATTY | 6 cut(s) | 1814, 2009, 2750, 2896, 3251, 3483 |
| XceI | RCATGY | 3 cut(s) | 2843, 3593, 3964 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1722, 3243, 3710 |
| XspI | CTAG | 4 cut(s) | 165, 920, 1521, 2330 |
| Zsp2I | ATGCAT | 1 cut(s) | 2831 |