SNF2 domain-containing protein CLASSY
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 425, 704 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 469 |
| AccI | GTMKAC | 1 cut(s) | 3024 |
| AccII | CGCG | 1 cut(s) | 600 |
| AccIII | TCCGGA | 1 cut(s) | 2780 |
| AciI | CCGC | 7 cut(s) | 37, 200, 495, 570, 1324, 2767, 3688 |
| AclI | AACGTT | 1 cut(s) | 1821 |
| AclWI | GGATC | 8 cut(s) | 934, 1690, 1721, 1734, 1829, 2066, 2886, 3372 |
| AcoI | YGGCCR | 1 cut(s) | 2940 |
| AcsI | RAATTY | 9 cut(s) | 343, 950, 1976, 2177, 2870, 3120, 3169, 3272, 3459 |
| AcuI | CTGAAG | 3 cut(s) | 1688, 2127, 2345 |
| AcvI | CACGTG | 1 cut(s) | 208 |
| AdeI | CACNNNGTG | 1 cut(s) | 2118 |
| AfeI | AGCGCT | 1 cut(s) | 1111 |
| AflIII | ACRYGT | 2 cut(s) | 207, 2209 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 673, 2032 |
| AjnI | CCWGG | 8 cut(s) | 32, 187, 2131, 2275, 2549, 2571, 2677, 3055 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 594, 626, 732, 764, 1017, 1049 |
| AleI | CACNNNNGTG | 1 cut(s) | 3390 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 521, 553, 2378, 2410 |
| Alw21I | GWGCWC | 4 cut(s) | 207, 2814, 3411, 3678 |
| Alw26I | GTCTC | 4 cut(s) | 145, 1185, 2020, 3299 |
| AlwI | GGATC | 8 cut(s) | 934, 1690, 1721, 1734, 1829, 2066, 2886, 3372 |
| Ama87I | CYCGRG | 3 cut(s) | 1604, 2895, 3752 |
| Aor13HI | TCCGGA | 1 cut(s) | 2780 |
| Aor51HI | AGCGCT | 1 cut(s) | 1111 |
| ApoI | RAATTY | 9 cut(s) | 343, 950, 1976, 2177, 2870, 3120, 3169, 3272, 3459 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 167, 199, 3259, 3291, 3848, 3880 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 3141, 3288, 3461 |
| AspLEI | GCGC | 1 cut(s) | 1112 |
| AspS9I | GGNCC | 9 cut(s) | 40, 437, 513, 705, 716, 842, 977, 2498, 2553 |
| AvaI | CYCGRG | 3 cut(s) | 1604, 2895, 3752 |
| AvaII | GGWCC | 5 cut(s) | 437, 513, 716, 842, 977 |
| BalI | TGGCCA | 1 cut(s) | 2942 |
| BamHI | GGATCC | 1 cut(s) | 1726 |
| BanII | GRGCYC | 2 cut(s) | 2814, 2902 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1566, 1598 |
| BauI | CACGAG | 1 cut(s) | 307 |
| BbrPI | CACGTG | 1 cut(s) | 208 |
| BbsI | GAAGAC | 4 cut(s) | 3044, 3272, 3441, 3861 |
| Bbv12I | GWGCWC | 4 cut(s) | 207, 2814, 3411, 3678 |
| BbvCI | CCTCAGC | 3 cut(s) | 282, 1437, 2646 |
| BceAI | ACGGC | 3 cut(s) | 2309, 3690, 3755 |
| BciT130I | CCWGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| BclI | TGATCA | 1 cut(s) | 412 |
| BcoDI | GTCTC | 4 cut(s) | 145, 1185, 2020, 3299 |
| BfaI | CTAG | 8 cut(s) | 246, 585, 723, 777, 1095, 2642, 3497, 3875 |
| BfoI | RGCGCY | 1 cut(s) | 1113 |
| BfuAI | ACCTGC | 2 cut(s) | 425, 704 |
| BglII | AGATCT | 1 cut(s) | 3374 |
| Bme1390I | CCNGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| Bme18I | GGWCC | 5 cut(s) | 437, 513, 716, 842, 977 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 673, 2032 |
| BmeT110I | CYCGRG | 3 cut(s) | 1604, 2895, 3752 |
| BmgT120I | GGNCC | 9 cut(s) | 40, 437, 513, 705, 716, 842, 977, 2498, 2553 |
| BmiI | GGNNCC | 7 cut(s) | 41, 706, 718, 844, 1728, 1789, 2626 |
| BmrFI | CCNGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| BmrI | ACTGGG | 1 cut(s) | 840 |
| BmuI | ACTGGG | 1 cut(s) | 840 |
| BpiI | GAAGAC | 4 cut(s) | 3044, 3272, 3441, 3861 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2871, 2903 |
| BpmI | CTGGAG | 7 cut(s) | 789, 1292, 2297, 2643, 2898, 3279, 3409 |
| Bpu10I | CCTNAGC | 4 cut(s) | 282, 1257, 1437, 2646 |
| BpuEI | CTTGAG | 1 cut(s) | 1632 |
| BsaAI | YACGTR | 1 cut(s) | 208 |
| BsaBI | GATNNNNATC | 2 cut(s) | 891, 1687 |
| BsaJI | CCNNGG | 6 cut(s) | 540, 2550, 2556, 2572, 2711, 3056 |
| BsaWI | WCCGGW | 1 cut(s) | 2780 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 194, 224, 778, 808, 1041, 1071, 1946, 1976 |
| Bse118I | RCCGGY | 1 cut(s) | 3684 |
| Bse3DI | GCAATG | 1 cut(s) | 1540 |
| Bse8I | GATNNNNATC | 2 cut(s) | 891, 1687 |
| BseAI | TCCGGA | 1 cut(s) | 2780 |
| BseBI | CCWGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| BseDI | CCNNGG | 6 cut(s) | 540, 2550, 2556, 2572, 2711, 3056 |
| BseJI | GATNNNNATC | 2 cut(s) | 891, 1687 |
| BseMI | GCAATG | 1 cut(s) | 1540 |
| BseYI | CCCAGC | 1 cut(s) | 3616 |
| BsgI | GTGCAG | 2 cut(s) | 942, 2362 |
| Bsh1236I | CGCG | 1 cut(s) | 600 |
| BsiHKAI | GWGCWC | 4 cut(s) | 207, 2814, 3411, 3678 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1604, 2895, 3752 |
| BsiSI | CCGG | 2 cut(s) | 2781, 3685 |
| BsiWI | CGTACG | 1 cut(s) | 89 |
| BslFI | GGGAC | 4 cut(s) | 358, 702, 828, 2135 |
| BsmAI | GTCTC | 4 cut(s) | 145, 1185, 2020, 3299 |
| BsmBI | CGTCTC | 1 cut(s) | 3299 |
| BsmFI | GGGAC | 4 cut(s) | 358, 702, 828, 2135 |
| BsmI | GAATGC | 2 cut(s) | 148, 1867 |
| BsoBI | CYCGRG | 3 cut(s) | 1604, 2895, 3752 |
| Bsp1286I | GDGCHC | 5 cut(s) | 207, 2814, 2902, 3411, 3678 |
| Bsp13I | TCCGGA | 1 cut(s) | 2780 |
| Bsp1407I | TGTACA | 2 cut(s) | 214, 913 |
| Bsp19I | CCATGG | 1 cut(s) | 540 |
| BspACI | CCGC | 7 cut(s) | 37, 200, 495, 570, 1324, 2767, 3688 |
| BspEI | TCCGGA | 1 cut(s) | 2780 |
| BspFNI | CGCG | 1 cut(s) | 600 |
| BspLI | GGNNCC | 7 cut(s) | 41, 706, 718, 844, 1728, 1789, 2626 |
| BspMAI | CTGCAG | 4 cut(s) | 436, 577, 715, 2090 |
| BspMI | ACCTGC | 2 cut(s) | 425, 704 |
| BspPI | GGATC | 8 cut(s) | 934, 1690, 1721, 1734, 1829, 2066, 2886, 3372 |
| BspQI | GCTCTTC | 1 cut(s) | 3666 |
| BsrDI | GCAATG | 1 cut(s) | 1540 |
| BsrFI | RCCGGY | 1 cut(s) | 3684 |
| BsrGI | TGTACA | 2 cut(s) | 214, 913 |
| BssAI | RCCGGY | 1 cut(s) | 3684 |
| BssECI | CCNNGG | 6 cut(s) | 540, 2550, 2556, 2572, 2711, 3056 |
| BssSI | CACGAG | 1 cut(s) | 307 |
| BssT1I | CCWWGG | 2 cut(s) | 540, 2556 |
| Bst2BI | CACGAG | 1 cut(s) | 307 |
| Bst2UI | CCWGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| Bst4CI | ACNGT | 3 cut(s) | 1509, 1849, 2116 |
| Bst6I | CTCTTC | 7 cut(s) | 1095, 1137, 1665, 1851, 1905, 2382, 3666 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1935 |
| BstAUI | TGTACA | 2 cut(s) | 214, 913 |
| BstBAI | YACGTR | 1 cut(s) | 208 |
| BstC8I | GCNNGC | 4 cut(s) | 14, 2345, 2372, 3594 |
| BstDSI | CCRYGG | 1 cut(s) | 540 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 444, 2645 |
| BstFNI | CGCG | 1 cut(s) | 600 |
| BstH2I | RGCGCY | 1 cut(s) | 1113 |
| BstHHI | GCGC | 1 cut(s) | 1112 |
| BstMAI | GTCTC | 4 cut(s) | 145, 1185, 2020, 3299 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 287, 337, 575, 1194, 1203, 1935, 2505, 3522 |
| BstNI | CCWGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| BstNSI | RCATGY | 5 cut(s) | 373, 1460, 2213, 2374, 2984 |
| BstSCI | CCNGG | 8 cut(s) | 32, 187, 2131, 2275, 2549, 2571, 2677, 3055 |
| BstUI | CGCG | 1 cut(s) | 600 |
| BstV2I | GAAGAC | 4 cut(s) | 3044, 3272, 3441, 3861 |
| BstX2I | RGATCY | 6 cut(s) | 1682, 1726, 1834, 2891, 3364, 3374 |
| BstYI | RGATCY | 6 cut(s) | 1682, 1726, 1834, 2891, 3364, 3374 |
| BtgI | CCRYGG | 1 cut(s) | 540 |
| BtgZI | GCGATG | 1 cut(s) | 1221 |
| BtsI | GCAGTG | 5 cut(s) | 429, 708, 1528, 2242, 2933 |
| BveI | ACCTGC | 2 cut(s) | 425, 704 |
| Cac8I | GCNNGC | 4 cut(s) | 14, 2345, 2372, 3594 |
| CfoI | GCGC | 1 cut(s) | 1112 |
| Cfr10I | RCCGGY | 1 cut(s) | 3684 |
| Cfr13I | GGNCC | 9 cut(s) | 40, 437, 513, 705, 716, 842, 977, 2498, 2553 |
| CseI | GACGC | 1 cut(s) | 3431 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 969, 1004, 2811, 2846 |
| DraI | TTTAAA | 1 cut(s) | 1542 |
| DraIII | CACNNNGTG | 1 cut(s) | 2118 |
| DriI | GACNNNNNGTC | 2 cut(s) | 673, 2032 |
| EaeI | YGGCCR | 1 cut(s) | 2940 |
| Eam1104I | CTCTTC | 7 cut(s) | 1095, 1137, 1665, 1851, 1905, 2382, 3666 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 673, 2032 |
| EarI | CTCTTC | 7 cut(s) | 1095, 1137, 1665, 1851, 1905, 2382, 3666 |
| Ecl136II | GAGCTC | 1 cut(s) | 2812 |
| Eco130I | CCWWGG | 2 cut(s) | 540, 2556 |
| Eco147I | AGGCCT | 3 cut(s) | 2640, 2839, 3879 |
| Eco24I | GRGCYC | 2 cut(s) | 2814, 2902 |
| Eco32I | GATATC | 1 cut(s) | 2662 |
| Eco47I | GGWCC | 5 cut(s) | 437, 513, 716, 842, 977 |
| Eco47III | AGCGCT | 1 cut(s) | 1111 |
| Eco53kI | GAGCTC | 1 cut(s) | 2812 |
| Eco57I | CTGAAG | 3 cut(s) | 1688, 2127, 2345 |
| Eco72I | CACGTG | 1 cut(s) | 208 |
| Eco88I | CYCGRG | 3 cut(s) | 1604, 2895, 3752 |
| EcoICRI | GAGCTC | 1 cut(s) | 2812 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 444, 2645 |
| EcoO109I | RGGNCCY | 3 cut(s) | 437, 716, 842 |
| EcoRI | GAATTC | 2 cut(s) | 2177, 3120 |
| EcoRII | CCWGG | 8 cut(s) | 32, 187, 2131, 2275, 2549, 2571, 2677, 3055 |
| EcoRV | GATATC | 1 cut(s) | 2662 |
| EcoT14I | CCWWGG | 2 cut(s) | 540, 2556 |
| EcoT22I | ATGCAT | 4 cut(s) | 259, 371, 2261, 3208 |
| EcoT38I | GRGCYC | 2 cut(s) | 2814, 2902 |
| ErhI | CCWWGG | 2 cut(s) | 540, 2556 |
| Esp3I | CGTCTC | 1 cut(s) | 3299 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3036, 3068 |
| FaqI | GGGAC | 4 cut(s) | 358, 702, 828, 2135 |
| FauI | CCCGC | 3 cut(s) | 30, 488, 1317 |
| FauNDI | CATATG | 2 cut(s) | 1072, 1485 |
| FbaI | TGATCA | 1 cut(s) | 412 |
| FblI | GTMKAC | 1 cut(s) | 3024 |
| FriOI | GRGCYC | 2 cut(s) | 2814, 2902 |
| FspBI | CTAG | 8 cut(s) | 246, 585, 723, 777, 1095, 2642, 3497, 3875 |
| GlaI | GCGC | 1 cut(s) | 1111 |
| GsaI | CCCAGC | 1 cut(s) | 3620 |
| GsuI | CTGGAG | 7 cut(s) | 789, 1292, 2297, 2643, 2898, 3279, 3409 |
| HaeII | RGCGCY | 1 cut(s) | 1113 |
| HapII | CCGG | 2 cut(s) | 2781, 3685 |
| HgaI | GACGC | 1 cut(s) | 3431 |
| HhaI | GCGC | 1 cut(s) | 1112 |
| Hin6I | GCGC | 1 cut(s) | 1110 |
| HinP1I | GCGC | 1 cut(s) | 1110 |
| HindIII | AAGCTT | 2 cut(s) | 1614, 2600 |
| HpaII | CCGG | 2 cut(s) | 2781, 3685 |
| Hpy166II | GTNNAC | 9 cut(s) | 317, 980, 1674, 1706, 2521, 2931, 3025, 3643, 3697 |
| Hpy8I | GTNNAC | 9 cut(s) | 317, 980, 1674, 1706, 2521, 2931, 3025, 3643, 3697 |
| HpyCH4III | ACNGT | 3 cut(s) | 1509, 1849, 2116 |
| HpyCH4IV | ACGT | 4 cut(s) | 207, 1821, 2097, 2913 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 287, 337, 575, 1194, 1203, 1935, 2505, 3522 |
| HpySE526I | ACGT | 4 cut(s) | 207, 1821, 2097, 2913 |
| HspAI | GCGC | 1 cut(s) | 1110 |
| Kpn2I | TCCGGA | 1 cut(s) | 2780 |
| Ksp22I | TGATCA | 1 cut(s) | 412 |
| LguI | GCTCTTC | 1 cut(s) | 3666 |
| MaeI | CTAG | 8 cut(s) | 246, 585, 723, 777, 1095, 2642, 3497, 3875 |
| MaeII | ACGT | 4 cut(s) | 207, 1821, 2097, 2913 |
| MaeIII | GTNAC | 5 cut(s) | 95, 113, 183, 1651, 3565 |
| MfeI | CAATTG | 1 cut(s) | 2944 |
| MflI | RGATCY | 6 cut(s) | 1682, 1726, 1834, 2891, 3364, 3374 |
| MhlI | GDGCHC | 5 cut(s) | 207, 2814, 2902, 3411, 3678 |
| MlsI | TGGCCA | 1 cut(s) | 2942 |
| MluNI | TGGCCA | 1 cut(s) | 2942 |
| MmeI | TCCRAC | 1 cut(s) | 1015 |
| Mox20I | TGGCCA | 1 cut(s) | 2942 |
| Mph1103I | ATGCAT | 4 cut(s) | 259, 371, 2261, 3208 |
| MroI | TCCGGA | 1 cut(s) | 2780 |
| MroXI | GAANNNNTTC | 3 cut(s) | 3141, 3288, 3461 |
| MscI | TGGCCA | 1 cut(s) | 2942 |
| MslI | CAYNNNNRTG | 7 cut(s) | 210, 1119, 1533, 2100, 2163, 3201, 3390 |
| Msp20I | TGGCCA | 1 cut(s) | 2942 |
| MspA1I | CMGCKG | 4 cut(s) | 200, 572, 1868, 2471 |
| MspI | CCGG | 2 cut(s) | 2781, 3685 |
| MspR9I | CCNGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| MunI | CAATTG | 1 cut(s) | 2944 |
| Mva1269I | GAATGC | 2 cut(s) | 148, 1867 |
| MvaI | CCWGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| MvnI | CGCG | 1 cut(s) | 600 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 287, 337, 575, 1194, 1203, 1935, 2505, 3522 |
| NcoI | CCATGG | 1 cut(s) | 540 |
| NdeI | CATATG | 2 cut(s) | 1072, 1485 |
| NlaIV | GGNNCC | 7 cut(s) | 41, 706, 718, 844, 1728, 1789, 2626 |
| NmeAIII | GCCGAG | 1 cut(s) | 2653 |
| NmuCI | GTSAC | 4 cut(s) | 95, 113, 183, 3565 |
| NsiI | ATGCAT | 4 cut(s) | 259, 371, 2261, 3208 |
| NspI | RCATGY | 5 cut(s) | 373, 1460, 2213, 2374, 2984 |
| OliI | CACNNNNGTG | 1 cut(s) | 3390 |
| PaeI | GCATGC | 1 cut(s) | 2374 |
| PaeR7I | CTCGAG | 1 cut(s) | 3752 |
| PceI | AGGCCT | 3 cut(s) | 2640, 2839, 3879 |
| PciI | ACATGT | 1 cut(s) | 2209 |
| PciSI | GCTCTTC | 1 cut(s) | 3666 |
| PctI | GAATGC | 2 cut(s) | 148, 1867 |
| PdmI | GAANNNNTTC | 3 cut(s) | 3141, 3288, 3461 |
| Pfl23II | CGTACG | 1 cut(s) | 89 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 469 |
| PfoI | TCCNGGA | 1 cut(s) | 2275 |
| PmaCI | CACGTG | 1 cut(s) | 208 |
| PmlI | CACGTG | 1 cut(s) | 208 |
| Ppu21I | YACGTR | 1 cut(s) | 208 |
| PpuMI | RGGWCCY | 3 cut(s) | 437, 716, 842 |
| PscI | ACATGT | 1 cut(s) | 2209 |
| Psp124BI | GAGCTC | 1 cut(s) | 2814 |
| Psp1406I | AACGTT | 1 cut(s) | 1821 |
| Psp5II | RGGWCCY | 3 cut(s) | 437, 716, 842 |
| Psp6I | CCWGG | 8 cut(s) | 32, 187, 2131, 2275, 2549, 2571, 2677, 3055 |
| PspCI | CACGTG | 1 cut(s) | 208 |
| PspFI | CCCAGC | 1 cut(s) | 3616 |
| PspGI | CCWGG | 8 cut(s) | 32, 187, 2131, 2275, 2549, 2571, 2677, 3055 |
| PspLI | CGTACG | 1 cut(s) | 89 |
| PspN4I | GGNNCC | 7 cut(s) | 41, 706, 718, 844, 1728, 1789, 2626 |
| PspPI | GGNCC | 9 cut(s) | 40, 437, 513, 705, 716, 842, 977, 2498, 2553 |
| PspPPI | RGGWCCY | 3 cut(s) | 437, 716, 842 |
| PstI | CTGCAG | 4 cut(s) | 436, 577, 715, 2090 |
| PsuI | RGATCY | 6 cut(s) | 1682, 1726, 1834, 2891, 3364, 3374 |
| PvuII | CAGCTG | 2 cut(s) | 1868, 2471 |
| RseI | CAYNNNNRTG | 7 cut(s) | 210, 1119, 1533, 2100, 2163, 3201, 3390 |
| SacI | GAGCTC | 1 cut(s) | 2814 |
| SapI | GCTCTTC | 1 cut(s) | 3666 |
| Sau96I | GGNCC | 9 cut(s) | 40, 437, 513, 705, 716, 842, 977, 2498, 2553 |
| ScrFI | CCNGG | 8 cut(s) | 34, 189, 2133, 2277, 2551, 2573, 2679, 3057 |
| SduI | GDGCHC | 5 cut(s) | 207, 2814, 2902, 3411, 3678 |
| Sfr274I | CTCGAG | 1 cut(s) | 3752 |
| SinI | GGWCC | 5 cut(s) | 437, 513, 716, 842, 977 |
| SlaI | CTCGAG | 1 cut(s) | 3752 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 210, 1119, 1533, 2100, 2163, 3201, 3390 |
| SmlI | CTYRAG | 2 cut(s) | 1647, 3752 |
| SmoI | CTYRAG | 2 cut(s) | 1647, 3752 |
| SphI | GCATGC | 1 cut(s) | 2374 |
| SseBI | AGGCCT | 3 cut(s) | 2640, 2839, 3879 |
| SsiI | CCGC | 7 cut(s) | 37, 200, 495, 570, 1324, 2767, 3688 |
| SspI | AATATT | 1 cut(s) | 1369 |
| SspMI | CTAG | 8 cut(s) | 246, 585, 723, 777, 1095, 2642, 3497, 3875 |
| SstI | GAGCTC | 1 cut(s) | 2814 |
| StuI | AGGCCT | 3 cut(s) | 2640, 2839, 3879 |
| StyD4I | CCNGG | 8 cut(s) | 32, 187, 2131, 2275, 2549, 2571, 2677, 3055 |
| StyI | CCWWGG | 2 cut(s) | 540, 2556 |
| TaaI | ACNGT | 3 cut(s) | 1509, 1849, 2116 |
| TaiI | ACGT | 4 cut(s) | 210, 1824, 2100, 2916 |
| TaqI | TCGA | 8 cut(s) | 173, 929, 1175, 2859, 3452, 3561, 3753, 3831 |
| TatI | WGTACW | 4 cut(s) | 51, 214, 913, 3037 |
| TauI | GCSGC | 2 cut(s) | 572, 3691 |
| TseFI | GTSAC | 4 cut(s) | 95, 113, 183, 3565 |
| Tsp45I | GTSAC | 4 cut(s) | 95, 113, 183, 3565 |
| TspGWI | ACGGA | 3 cut(s) | 799, 2456, 3061 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 469 |
| VpaK11BI | GGWCC | 5 cut(s) | 437, 513, 716, 842, 977 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 444, 2645 |
| XapI | RAATTY | 9 cut(s) | 343, 950, 1976, 2177, 2870, 3120, 3169, 3272, 3459 |
| XbaI | TCTAGA | 2 cut(s) | 584, 722 |
| XceI | RCATGY | 5 cut(s) | 373, 1460, 2213, 2374, 2984 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 470 |
| XhoI | CTCGAG | 1 cut(s) | 3752 |
| XmiI | GTMKAC | 1 cut(s) | 3024 |
| XmnI | GAANNNNTTC | 3 cut(s) | 3141, 3288, 3461 |
| XspI | CTAG | 8 cut(s) | 246, 585, 723, 777, 1095, 2642, 3497, 3875 |
| Zsp2I | ATGCAT | 4 cut(s) | 259, 371, 2261, 3208 |