Rh2CG463000

SNF2 domain-containing protein CLASSY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001072
Physical Location & Seq
Reverse (-)
62638086 .. 62643859
5774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG463000.1

Sequence Viewer

Length: 3906 bp
ATGGATTATAGGCCTGTATCAAGCAGAACAAGGTCGAAGAGAGACAAAGCTATCATTGAACGTCATTGGGAAATGAAAATTAACAGTGGGGTGAGTCCAGCCTCAAGGGATAAGAAAATTAGGAGGTCCAACCAGGCTTCTGTTTCTCATATGGGTGAGTCCAGTTCTAGGAGACAGAGTTTTGAGTGGGTTGCTGATCATGTGGAATCCCTGGAAAACCAACAGAATGATGATGATTCAGAGAGTGTTATAAAAAGAAGTGGGAAACAGGGAAAGGGGAAAAGAGTTGCGGTTGGTGTGAAGAGAAAGAGGAGTTTAGGATTAGATGTGTCGGCTGATAGCAACAAAGATGGTTGCCATTGGAGAGCTGTTTCGGATAATGGTGTGGAAGTTGTCGATTTGGTGGATAGTCCTGATGATGATGAGGTACTAGTTTCTAAAGGTAAAGAGGGAGGAGTAGGAGTTAATGTTGATGTTGATTGTGTGAGTGATGATGAAAGTGATGAGGATGTTGACGATGTTCGTGATAATAAGAGTGATGAGGATGTTTCATCAGCAGAGGAAGATGACAGTAGTGACGAAAGTGTATTCTCTATAGAGGAGGAATATGAATGTGTTTCCTTATCAGTTGAAGATAGTAGTGAGCAGGAAAATGAAGAGGAGAGTGAGGTGACGGAGAAGAATGAGAAAGCGTGCAAGGGAGAAAGTGTTGAGGTTGATTGGAAGGGAAAGATAAATGCTGATGGTGATGTTCTGCATTATTGTTCTGCTCATGATACTGATATTGATGTCAGAAGTGAGCAAGAGTGGAAGGAAGAAAGTCTTGGGATTCATCCGAAGGGAAAGATTAATGCTGATGGGAATGATCTACATTCTTCTTCTGATCATGATATCAGTGACAGAAGGGCAAAATTGGGGGTGGCAGAGAGTGTGTTGGTTACCTCCTGTACTAAAAAGAAGAGCACGAGGGTACCAAAACAGAAAAGATTACCTACTATTGCATTTGAAGCCCCAAAAGTTGAATGTCTCCCTTTGAGATTCAGTTTTGCTAAGCAGCCAACTATTCCTGAGAAGCCAGATTATGAGAGAGAAGTAGATGCCCTTCTTGCTGAATATAAATTTGCTATAGCATATGAGAATGCTTCTGCTGATTCTAAGGCTAAAGACGGCTACTTTACAAGATCAGATAATAACAGAAATGATGTCAATGATGTGACTTATGGTGGTAGTCCAGAAACGGCAATTGATAATGGGAGAACAATTGGTTTGCAGACGGCTTTCAATGAGAATGAAGCTGCCAAAGGACATGATGATGCAAGGTCAAAGAATAGGATACATGATTTCGATGATGAGACGCATGGTGGTGCTTCAGAATCTGGTTTTAATAAAGGCAGTAAATTTGATGTGCACAGGGCTTGCAAGAAGGGTGTAGAGGCCAAAGGAAACAACTTTTCAAGGTCCTTTAATTCACGAAAGGATGACAAAGAAGAGACATATGGTGGTAGTCGTCCAGAAACATATAAGAAGAAAGAAAGGGTGGGGAATCTTACCAACAAAAAGGGCATTACAGGACCAAAAGATTGCAATGCCTTTATGATTCTTGTAGATTCGATTTATGACAAGGGAGAAGTGTCAGGGGAACTACCTCTGTTTGGGGATGAATCCCCCCAAGATGAAGCTCCAAGAGATGAGCCTCTTCCATTGGTTTTCACGCTTGGTCATCCTCCAAGTCCTGCACCAGAGAAGTCAGCTTCTGAGATAGAACTAGAAAACCTTTTTGAAGAATATGACTTTGTCCAAATGTCTGAAGAGATTGGTTCCACTGATTCTAAACTGGTTGAAACTAATGACTCAGTCCCTCCCGGTACGGAAGTTACTCAGTATATGCTTTGTAGTCAAGGGAAACACGATCTTATACTTGATGAAGAAATTGGACTCATATGCCAATTCTGCCCTCATGTGCATCGGGAGATCAAGTATATTGTACCAGACTTTGCTCCAAACCCTTATGGAAAAGCTGGGAAGAGATTTTATGAAGAAGACAACCGGTCTATCCTTGTTGATCTTCAGTGTAATGACCCTGACAATTGTGGCTTTAGTTCGGATGCTCATACTGAAGGCACAGTGTGGGACTTGATCCCTGGTGTGAAAAGTGATATGTACCCTCATCAGCGTGAAGGTTTCGAATTTATTTGGAGTCACTTAGCTGGTGGAATTCAGCTTGGAAAGTTGGCAAAACCTAGTGCTTGTGGCGGTGATGGATGCATTATATCACATGCACCTGGGACTGGGAAGACTCGTTTGACTATTATCTTTATCCAGTCGTACATGAATTTTAACCCATCAAGCAGGCCACTCATTGTTGCTCCACGTACCATGCTTCTTACTTGGGAAGAGGAGTTTAAGAAATGGGGTTTTGACATTCCCTTTCACAATCTTAACAATCCTGACTTCACTGGAAAAGAGGATGAAGCAGCTCGCAATCTTGTGAAGGATGGTAAAAGTTCAGAAATGATAAACTTGACCCGTATCGTGAAGCTAAAGTCCTGGGCAGAGAAAAGAAGCATCTTGGGTATTAGTTATTCACTGTTTGAGCAGATTTGTGGAGCTTCTACCAAGAAAGGAAAACATCCACTTTCTCCAAGACGAAAGCTCGAAGCTGAGCAGATGTGGAAAGTCCTTGTTGAATTTCCTGGTCTTGTAGTATTTGACGAAGGGCACAATCCTCGCAACGACCAGAGTTACTCGTGGAATGCTCTTTTAAAACTGAAAACAAGAAGGCGCATTCTCCTCTCTGGTACTCCTTTTCAGAATAATTTTGAGGAGCTCTACAATACAGTCCGCTTGGTGAGGCCAGAATGGACCACCAATCCTACCTGCCTTGGAGCTTTTGACAAAAAGCAACGGTCTTGGGGCCAAATGCGAGGCAGAAAAGGCAATGCTGGGAAAGGCCAATTTGCTGATGATAATACAAAACGAGCTAAAGAGGTCAGAGCTATGATTTCCCCATTTGTGCATGTTTACAAAGGCACCATACTGCAAGATAAGCTTCCTGGGTTAAGGAACTCAGTTGTTGTTTTACAGCCAACAGCTTTACAGCAGAGATGTTCTGACAGAATTCAGCTGATAAAAAGTCCATTTAAATATGAACGAATAGAGGCTAAAGTAACTATCCACCCTTCTCTCTTGCTTAATGAAAATCGCTCTATGTTTCTCGAGGAAGACAAGTATTCAGGTGACTGGAAAAGGCTAACAGAAATCAAGTTAAATCCTGAAGGTGGAGTGAAGGCAAGATTTGCAGTTGATCTCATTCGGCTTTGTCAAGCTATGAATGAAAGAGTTTTGGTATTCAGTCAGTGGGTTGATCCATTGCTCTTAATAAGGGACCTGCTCAAATCTCAGTTTCAGTGGGTGGAAGGAGAGGAGGTTATGTATATGGATGGAAAATGTGATGCAAAGCAGCGCCAATCCTCAATGAGTTATTTCAATGATCCATCCACCAAAGCAAAGGTTATGTTAGCTACAACAAGAGGTTGCAACGAAGGAATAAGTTTAGTTGGAGCTTCAAGGGTTGTACTGCTTGATGTTGCATGGAACCCTTCTGTTGAGAGGCAAGCTATATCCCGAGCATACCGATTGGGACAGAAAAAAATTGTGTTCATCTACCATCTCCTCATGGCTGGGGCAAGAGAAGAGGACAAATACAACCGACAAGTTGAGAAGTATCGGTTGTCTGAATTGGTATTTTCTTGTTCGGATACAGAAGCTGATGCCAAGAAAATCCCAGCTTCGGTCGCGGAGGACAAGATTTTGGAAGAGATGGTTCAGCACCAGAAACTGAAGCATATATTTCAAAAGATAACATTACTGAATGAAGCTTCATATTTGGACGAAGAATTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

1301

Amino Acids

146.46

Weight (kDa)

5.45

Isoelectric Point (pI)

47.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 720 - 936 1.5e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 723 - 1038 1.3e-23 SNF2-related domain
Helicase_C PF00271 1102 - 1214 5.2e-16 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 251
Acc36I ACCTGC 2 cut(s) 2885, 3396
Acc65I GGTACC 1 cut(s) 970
AccB1I GGYRCC 2 cut(s) 970, 3029
AccII CGCG 1 cut(s) 3797
AciI CCGC 4 cut(s) 290, 2253, 2842, 3797
AclWI GGATC 3 cut(s) 2131, 3359, 3485
AcsI RAATTY 8 cut(s) 1118, 1397, 2186, 2214, 2332, 2687, 3117, 3896
AcuI CTGAAG 6 cut(s) 1353, 1827, 2051, 2136, 3294, 3860
AdeI CACNNNGTG 1 cut(s) 2127
AfiI CCNNNNNNNGG 5 cut(s) 168, 1652, 2288, 3278, 3790
AgeI ACCGGT 1 cut(s) 2046
AhdI GACNNNNNGTC 1 cut(s) 2047
AhlI ACTAGT 1 cut(s) 430
AjnI CCWGG 7 cut(s) 132, 210, 2140, 2281, 2546, 2692, 3052
AjuI GAANNNNNNNTTGG 2 cut(s) 807, 839
Alw21I GWGCWC 3 cut(s) 965, 1410, 2829
Alw26I GTCTC 5 cut(s) 36, 166, 1031, 1346, 1484
Alw44I GTGCAC 1 cut(s) 1406
AlwI GGATC 3 cut(s) 2131, 3359, 3485
AlwNI CAGNNNCTG 4 cut(s) 1376, 1754, 3767, 3838
Ama87I CYCGRG 2 cut(s) 3215, 3624
AoxI GGCC 6 cut(s) 11, 1434, 2351, 2852, 2914, 2950
ApaLI GTGCAC 1 cut(s) 1406
ApeKI GCWGC 4 cut(s) 1054, 1295, 2474, 3460
ApoI RAATTY 8 cut(s) 1118, 1397, 2186, 2214, 2332, 2687, 3117, 3896
ArsI GACNNNNNNTTYG 1 cut(s) 3881
AseI ATTAAT 1 cut(s) 849
AsiGI ACCGGT 1 cut(s) 2046
Asp718I GGTACC 1 cut(s) 970
AspLEI GCGC 2 cut(s) 2784, 3465
AspS9I GGNCC 6 cut(s) 126, 1458, 1571, 2862, 2914, 3385
AsuC2I CCSGG 1 cut(s) 1863
AsuHPI GGTGA 7 cut(s) 103, 167, 682, 758, 2267, 2860, 3248
AsuII TTCGAA 1 cut(s) 2184
AvaI CYCGRG 2 cut(s) 3215, 3624
AvaII GGWCC 5 cut(s) 126, 1458, 1571, 2862, 3385
BaeGI GKGCMC 2 cut(s) 1410, 2721
BaeI ACNNNNGTAYC 4 cut(s) 954, 987, 1857, 1890
BanI GGYRCC 2 cut(s) 970, 3029
BanII GRGCYC 1 cut(s) 2829
BarI GAAGNNNNNNTAC 2 cut(s) 1086, 1118
BauI CACGAG 2 cut(s) 964, 2746
BbsI GAAGAC 3 cut(s) 2046, 2300, 3228
Bbv12I GWGCWC 3 cut(s) 965, 1410, 2829
BbvI GCAGC 4 cut(s) 1066, 1282, 2486, 3472
BceAI ACGGC 3 cut(s) 1183, 1254, 1290
BcgI CGANNNNNNTGC 2 cut(s) 2708, 2742
BciT130I CCWGG 7 cut(s) 134, 212, 2142, 2283, 2548, 2694, 3054
BciVI GTATCC 2 cut(s) 1326, 3751
BclI TGATCA 2 cut(s) 196, 883
BcnI CCSGG 1 cut(s) 1863
BcoDI GTCTC 5 cut(s) 36, 166, 1031, 1346, 1484
BcuI ACTAGT 1 cut(s) 430
BfaI CTAG 4 cut(s) 168, 431, 1766, 2241
BfmI CTRYAG 2 cut(s) 594, 1125
BfoI RGCGCY 1 cut(s) 3466
BfuAI ACCTGC 2 cut(s) 2885, 3396
BfuI GTATCC 2 cut(s) 1326, 3751
BisI GCNGC 4 cut(s) 1055, 1296, 2475, 3461
BlpI GCTNAGC 2 cut(s) 1050, 2661
BlsI GCNGC 4 cut(s) 1056, 1297, 2476, 3462
Bme1390I CCNGG 8 cut(s) 134, 212, 1863, 2142, 2283, 2548, 2694, 3054
Bme18I GGWCC 5 cut(s) 126, 1458, 1571, 2862, 3385
BmeRI GACNNNNNGTC 1 cut(s) 2047
BmeT110I CYCGRG 2 cut(s) 3215, 3624
BmgT120I GGNCC 6 cut(s) 126, 1458, 1571, 2862, 2914, 3385
BmiI GGNNCC 6 cut(s) 972, 1819, 2915, 3031, 3386, 3596
BmrFI CCNGG 8 cut(s) 134, 212, 1863, 2142, 2283, 2548, 2694, 3054
BmrI ACTGGG 1 cut(s) 2298
BmsI GCATC 8 cut(s) 1087, 1303, 1972, 2095, 2252, 2574, 3442, 3760
BmuI ACTGGG 1 cut(s) 2298
BpiI GAAGAC 3 cut(s) 2046, 2300, 3228
Bpu1102I GCTNAGC 2 cut(s) 1050, 2661
Bpu14I TTCGAA 1 cut(s) 2184
BpuEI CTTGAG 1 cut(s) 88
BpuMI CCSGG 1 cut(s) 1863
BsaAI YACGTR 1 cut(s) 2372
BsaJI CCNNGG 6 cut(s) 210, 2140, 2282, 2547, 2881, 3053
BsaWI WCCGGW 1 cut(s) 2046
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 1652, 2288, 3278, 3790
Bse118I RCCGGY 1 cut(s) 2046
Bse1I ACTGG 6 cut(s) 162, 1839, 2293, 2320, 2461, 3245
Bse3DI GCAATG 3 cut(s) 1591, 2944, 3368
BseBI CCWGG 7 cut(s) 134, 212, 2142, 2283, 2548, 2694, 3054
BseDI CCNNGG 6 cut(s) 210, 2140, 2282, 2547, 2881, 3053
BseLI CCNNNNNNNGG 5 cut(s) 168, 1652, 2288, 3278, 3790
BseMI GCAATG 3 cut(s) 1591, 2944, 3368
BseMII CTCAG 7 cut(s) 1059, 1746, 1866, 1892, 2652, 3081, 3413
BseNI ACTGG 6 cut(s) 162, 1839, 2293, 2320, 2461, 3245
BseRI GAGGAG 9 cut(s) 325, 468, 614, 674, 2411, 2780, 2837, 3437, 3662
BseSI GKGCMC 2 cut(s) 1410, 2721
BseXI GCAGC 4 cut(s) 1066, 1282, 2486, 3472
BseYI CCCAGC 4 cut(s) 2018, 2942, 3680, 3784
BsgI GTGCAG 1 cut(s) 1719
Bsh1236I CGCG 1 cut(s) 3797
Bsh1285I CGRYCG 1 cut(s) 3795
BshFI GGCC 6 cut(s) 13, 1436, 2353, 2854, 2916, 2952
BshNI GGYRCC 2 cut(s) 970, 3029
BshTI ACCGGT 1 cut(s) 2046
BsiEI CGRYCG 1 cut(s) 3795
BsiHKAI GWGCWC 3 cut(s) 965, 1410, 2829
BsiHKCI CYCGRG 2 cut(s) 3215, 3624
BsiSI CCGG 2 cut(s) 1863, 2047
BslFI GGGAC 5 cut(s) 1841, 2144, 2299, 3398, 3654
BslI CCNNNNNNNGG 5 cut(s) 168, 1652, 2288, 3278, 3790
BsmAI GTCTC 5 cut(s) 36, 166, 1031, 1346, 1484
BsmBI CGTCTC 1 cut(s) 1346
BsmFI GGGAC 5 cut(s) 1841, 2144, 2299, 3398, 3654
BsmI GAATGC 3 cut(s) 1144, 2758, 2784
BsnI GGCC 6 cut(s) 13, 1436, 2353, 2854, 2916, 2952
BsoBI CYCGRG 2 cut(s) 3215, 3624
Bsp119I TTCGAA 1 cut(s) 2184
Bsp1286I GDGCHC 4 cut(s) 965, 1410, 2721, 2829
Bsp1720I GCTNAGC 2 cut(s) 1050, 2661
BspACI CCGC 4 cut(s) 290, 2253, 2842, 3797
BspANI GGCC 6 cut(s) 13, 1436, 2353, 2854, 2916, 2952
BspCNI CTCAG 7 cut(s) 1060, 1747, 1865, 1891, 2653, 3080, 3412
BspFNI CGCG 1 cut(s) 3797
BspHI TCATGA 2 cut(s) 772, 886
BspLI GGNNCC 6 cut(s) 972, 1819, 2915, 3031, 3386, 3596
BspMI ACCTGC 2 cut(s) 2885, 3396
BspPI GGATC 3 cut(s) 2131, 3359, 3485
BspQI GCTCTTC 1 cut(s) 953
BspT104I TTCGAA 1 cut(s) 2184
BspT107I GGYRCC 2 cut(s) 970, 3029
BsrDI GCAATG 3 cut(s) 1591, 2944, 3368
BsrFI RCCGGY 1 cut(s) 2046
BsrI ACTGG 6 cut(s) 162, 1839, 2293, 2320, 2461, 3245
BssAI RCCGGY 1 cut(s) 2046
BssECI CCNNGG 6 cut(s) 210, 2140, 2282, 2547, 2881, 3053
BssSI CACGAG 2 cut(s) 964, 2746
BssT1I CCWWGG 1 cut(s) 2881
Bst2BI CACGAG 2 cut(s) 964, 2746
Bst2UI CCWGG 7 cut(s) 134, 212, 2142, 2283, 2548, 2694, 3054
Bst4CI ACNGT 6 cut(s) 86, 572, 2125, 2589, 2839, 2907
BstAPI GCANNNNNTGC 1 cut(s) 3296
BstBAI YACGTR 1 cut(s) 2372
BstBI TTCGAA 1 cut(s) 2184
BstC8I GCNNGC 5 cut(s) 694, 1417, 2351, 2479, 3615
BstEII GGTNACC 1 cut(s) 937
BstFNI CGCG 1 cut(s) 3797
BstH2I RGCGCY 1 cut(s) 3466
BstHHI GCGC 2 cut(s) 2784, 3465
BstMAI GTCTC 5 cut(s) 36, 166, 1031, 1346, 1484
BstMCI CGRYCG 1 cut(s) 3795
BstMWI GCNNNNNNNGC 7 cut(s) 1007, 1106, 1950, 2934, 3046, 3296, 3794
BstNI CCWGG 7 cut(s) 134, 212, 2142, 2283, 2548, 2694, 3054
BstNSI RCATGY 2 cut(s) 2279, 3020
BstPI GGTNACC 1 cut(s) 937
BstSCI CCNGG 8 cut(s) 132, 210, 1861, 2140, 2281, 2546, 2692, 3052
BstSFI CTRYAG 2 cut(s) 594, 1125
BstSLI GKGCMC 2 cut(s) 1410, 2721
BstUI CGCG 1 cut(s) 3797
BstV1I GCAGC 4 cut(s) 1066, 1282, 2486, 3472
BstV2I GAAGAC 3 cut(s) 2046, 2300, 3228
BsuI GTATCC 2 cut(s) 1326, 3751
BsuRI GGCC 6 cut(s) 13, 1436, 2353, 2854, 2916, 2952
BtsIMutI CAGTG 9 cut(s) 91, 901, 1821, 2075, 2130, 2454, 2585, 3362, 3413
BveI ACCTGC 2 cut(s) 2885, 3396
Cac8I GCNNGC 5 cut(s) 694, 1417, 2351, 2479, 3615
CaiI CAGNNNCTG 4 cut(s) 1376, 1754, 3767, 3838
CciI TCATGA 2 cut(s) 772, 886
CfoI GCGC 2 cut(s) 2784, 3465
Cfr10I RCCGGY 1 cut(s) 2046
Cfr13I GGNCC 6 cut(s) 126, 1458, 1571, 2862, 2914, 3385
CseI GACGC 1 cut(s) 1363
CspAI ACCGGT 1 cut(s) 2046
DraI TTTAAA 2 cut(s) 2763, 3142
DraIII CACNNNGTG 1 cut(s) 2127
DriI GACNNNNNGTC 1 cut(s) 2047
Eam1105I GACNNNNNGTC 1 cut(s) 2047
Ecl136II GAGCTC 1 cut(s) 2827
Eco130I CCWWGG 1 cut(s) 2881
Eco147I AGGCCT 1 cut(s) 13
Eco24I GRGCYC 1 cut(s) 2829
Eco32I GATATC 1 cut(s) 892
Eco47I GGWCC 5 cut(s) 126, 1458, 1571, 2862, 3385
Eco53kI GAGCTC 1 cut(s) 2827
Eco57I CTGAAG 6 cut(s) 1353, 1827, 2051, 2136, 3294, 3860
Eco88I CYCGRG 2 cut(s) 3215, 3624
Eco91I GGTNACC 1 cut(s) 937
EcoICRI GAGCTC 1 cut(s) 2827
EcoO109I RGGNCCY 2 cut(s) 1458, 3385
EcoO65I GGTNACC 1 cut(s) 937
EcoRI GAATTC 2 cut(s) 2214, 3117
EcoRII CCWGG 7 cut(s) 132, 210, 2140, 2281, 2546, 2692, 3052
EcoRV GATATC 1 cut(s) 892
EcoT14I CCWWGG 1 cut(s) 2881
EcoT22I ATGCAT 1 cut(s) 2267
EcoT38I GRGCYC 1 cut(s) 2829
ErhI CCWWGG 1 cut(s) 2881
Esp3I CGTCTC 1 cut(s) 1346
FalI AAGNNNNNCTT 4 cut(s) 807, 839, 3033, 3065
FaqI GGGAC 5 cut(s) 1841, 2144, 2299, 3398, 3654
FauNDI CATATG 4 cut(s) 150, 1132, 1495, 1940
FbaI TGATCA 2 cut(s) 196, 883
Fnu4HI GCNGC 4 cut(s) 1055, 1296, 2475, 3461
FriOI GRGCYC 1 cut(s) 2829
Fsp4HI GCNGC 4 cut(s) 1055, 1296, 2475, 3461
FspBI CTAG 4 cut(s) 168, 431, 1766, 2241
GlaI GCGC 2 cut(s) 2783, 3464
GluI GCNGC 4 cut(s) 1055, 1296, 2475, 3461
GsaI CCCAGC 4 cut(s) 2022, 2946, 3684, 3788
HaeII RGCGCY 1 cut(s) 3466
HaeIII GGCC 6 cut(s) 13, 1436, 2353, 2854, 2916, 2952
HapII CCGG 2 cut(s) 1863, 2047
HgaI GACGC 1 cut(s) 1363
HhaI GCGC 2 cut(s) 2784, 3465
Hin6I GCGC 2 cut(s) 2782, 3463
HinP1I GCGC 2 cut(s) 2782, 3463
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HindIII AAGCTT 2 cut(s) 3047, 3876
HpaII CCGG 2 cut(s) 1863, 2047
HphI GGTGA 7 cut(s) 103, 167, 682, 758, 2267, 2860, 3248
Hpy166II GTNNAC 3 cut(s) 514, 1408, 3022
Hpy8I GTNNAC 3 cut(s) 514, 1408, 3022
HpyCH4III ACNGT 6 cut(s) 86, 572, 2125, 2589, 2839, 2907
HpyCH4IV ACGT 2 cut(s) 61, 2371
HpyF10VI GCNNNNNNNGC 7 cut(s) 1007, 1106, 1950, 2934, 3046, 3296, 3794
HpySE526I ACGT 2 cut(s) 61, 2371
HspAI GCGC 2 cut(s) 2782, 3463
KpnI GGTACC 1 cut(s) 974
Ksp22I TGATCA 2 cut(s) 196, 883
LguI GCTCTTC 1 cut(s) 953
LmnI GCTCC 7 cut(s) 1684, 2002, 2371, 2606, 2824, 2885, 3560
Lsp1109I GCAGC 4 cut(s) 1066, 1282, 2486, 3472
LweI GCATC 8 cut(s) 1087, 1303, 1972, 2095, 2252, 2574, 3442, 3760
MaeI CTAG 4 cut(s) 168, 431, 1766, 2241
MaeII ACGT 2 cut(s) 61, 2371
MfeI CAATTG 3 cut(s) 1242, 1260, 2086
MhlI GDGCHC 4 cut(s) 965, 1410, 2721, 2829
MlyI GAGTC 6 cut(s) 103, 167, 1844, 1929, 2206, 2290
MmeI TCCRAC 2 cut(s) 153, 3538
Mph1103I ATGCAT 1 cut(s) 2267
MslI CAYNNNNRTG 4 cut(s) 153, 1311, 1362, 2172
MspA1I CMGCKG 1 cut(s) 3124
MspI CCGG 2 cut(s) 1863, 2047
MspR9I CCNGG 8 cut(s) 134, 212, 1863, 2142, 2283, 2548, 2694, 3054
MunI CAATTG 3 cut(s) 1242, 1260, 2086
Mva1269I GAATGC 3 cut(s) 1144, 2758, 2784
MvaI CCWGG 7 cut(s) 134, 212, 2142, 2283, 2548, 2694, 3054
MvnI CGCG 1 cut(s) 3797
MwoI GCNNNNNNNGC 7 cut(s) 1007, 1106, 1950, 2934, 3046, 3296, 3794
NciI CCSGG 1 cut(s) 1863
NdeI CATATG 4 cut(s) 150, 1132, 1495, 1940
NlaIV GGNNCC 6 cut(s) 972, 1819, 2915, 3031, 3386, 3596
NmuCI GTSAC 6 cut(s) 575, 670, 896, 1213, 2198, 3236
NsiI ATGCAT 1 cut(s) 2267
NspI RCATGY 2 cut(s) 2279, 3020
NspV TTCGAA 1 cut(s) 2184
PaeR7I CTCGAG 1 cut(s) 3215
PagI TCATGA 2 cut(s) 772, 886
PceI AGGCCT 1 cut(s) 13
PciSI GCTCTTC 1 cut(s) 953
PctI GAATGC 3 cut(s) 1144, 2758, 2784
PflFI GACNNNGTC 2 cut(s) 1793, 1853
PinAI ACCGGT 1 cut(s) 2046
PkrI GCNGC 4 cut(s) 1056, 1297, 2476, 3462
PleI GAGTC 6 cut(s) 102, 166, 1844, 1929, 2205, 2290
PpsI GAGTC 6 cut(s) 102, 166, 1844, 1929, 2205, 2290
Ppu21I YACGTR 1 cut(s) 2372
PpuMI RGGWCCY 2 cut(s) 1458, 3385
PshBI ATTAAT 1 cut(s) 849
PsiI TTATAA 1 cut(s) 251
Psp124BI GAGCTC 1 cut(s) 2829
Psp5II RGGWCCY 2 cut(s) 1458, 3385
Psp6I CCWGG 7 cut(s) 132, 210, 2140, 2281, 2546, 2692, 3052
PspEI GGTNACC 1 cut(s) 937
PspFI CCCAGC 4 cut(s) 2018, 2942, 3680, 3784
PspGI CCWGG 7 cut(s) 132, 210, 2140, 2281, 2546, 2692, 3052
PspN4I GGNNCC 6 cut(s) 972, 1819, 2915, 3031, 3386, 3596
PspPI GGNCC 6 cut(s) 126, 1458, 1571, 2862, 2914, 3385
PspPPI RGGWCCY 2 cut(s) 1458, 3385
PstNI CAGNNNCTG 4 cut(s) 1376, 1754, 3767, 3838
PsyI GACNNNGTC 2 cut(s) 1793, 1853
PvuII CAGCTG 1 cut(s) 3124
RseI CAYNNNNRTG 4 cut(s) 153, 1311, 1362, 2172
SacI GAGCTC 1 cut(s) 2829
SapI GCTCTTC 1 cut(s) 953
SatI GCNGC 4 cut(s) 1055, 1296, 2475, 3461
Sau96I GGNCC 6 cut(s) 126, 1458, 1571, 2862, 2914, 3385
SchI GAGTC 6 cut(s) 103, 167, 1844, 1929, 2206, 2290
ScrFI CCNGG 8 cut(s) 134, 212, 1863, 2142, 2283, 2548, 2694, 3054
SduI GDGCHC 4 cut(s) 965, 1410, 2721, 2829
SfaNI GCATC 8 cut(s) 1087, 1303, 1972, 2095, 2252, 2574, 3442, 3760
SfcI CTRYAG 2 cut(s) 594, 1125
Sfr274I CTCGAG 1 cut(s) 3215
SfuI TTCGAA 1 cut(s) 2184
SinI GGWCC 5 cut(s) 126, 1458, 1571, 2862, 3385
SlaI CTCGAG 1 cut(s) 3215
SmiI ATTTAAAT 1 cut(s) 3142
SmiMI CAYNNNNRTG 4 cut(s) 153, 1311, 1362, 2172
SmlI CTYRAG 2 cut(s) 103, 3215
SmoI CTYRAG 2 cut(s) 103, 3215
SpeI ACTAGT 1 cut(s) 430
SseBI AGGCCT 1 cut(s) 13
SsiI CCGC 4 cut(s) 290, 2253, 2842, 3797
SspMI CTAG 4 cut(s) 168, 431, 1766, 2241
SstI GAGCTC 1 cut(s) 2829
StuI AGGCCT 1 cut(s) 13
StyD4I CCNGG 8 cut(s) 132, 210, 1861, 2140, 2281, 2546, 2692, 3052
StyI CCWWGG 1 cut(s) 2881
SwaI ATTTAAAT 1 cut(s) 3142
TaaI ACNGT 6 cut(s) 86, 572, 2125, 2589, 2839, 2907
TaiI ACGT 2 cut(s) 64, 2374
TaqI TCGA 7 cut(s) 35, 396, 1344, 1610, 2184, 2655, 3216
TaqII GACCGA 1 cut(s) 3781
TatI WGTACW 2 cut(s) 947, 3574
TscAI CASTG 9 cut(s) 91, 901, 1828, 2075, 2130, 2461, 2592, 3362, 3413
TseFI GTSAC 6 cut(s) 575, 670, 896, 1213, 2198, 3236
TseI GCWGC 4 cut(s) 1054, 1295, 2474, 3460
Tsp45I GTSAC 6 cut(s) 575, 670, 896, 1213, 2198, 3236
TspGWI ACGGA 2 cut(s) 689, 1883
TspRI CASTG 9 cut(s) 91, 901, 1828, 2075, 2130, 2461, 2592, 3362, 3413
Tth111I GACNNNGTC 2 cut(s) 1793, 1853
VneI GTGCAC 1 cut(s) 1406
VpaK11BI GGWCC 5 cut(s) 126, 1458, 1571, 2862, 3385
VspI ATTAAT 1 cut(s) 849
XapI RAATTY 8 cut(s) 1118, 1397, 2186, 2214, 2332, 2687, 3117, 3896
XceI RCATGY 2 cut(s) 2279, 3020
XhoI CTCGAG 1 cut(s) 3215
XspI CTAG 4 cut(s) 168, 431, 1766, 2241
Zsp2I ATGCAT 1 cut(s) 2267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.