SNF2 domain-containing protein CLASSY
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 783, 3467 |
| AccB1I | GGYRCC | 3 cut(s) | 1556, 1684, 3620 |
| AccIII | TCCGGA | 1 cut(s) | 2089 |
| AciI | CCGC | 6 cut(s) | 320, 1403, 1644, 3424, 3551, 4382 |
| AclI | AACGTT | 1 cut(s) | 103 |
| AclWI | GGATC | 3 cut(s) | 2713, 3950, 4076 |
| AcoI | YGGCCR | 2 cut(s) | 1050, 1233 |
| AcsI | RAATTY | 5 cut(s) | 1832, 2768, 2914, 3269, 3501 |
| AcuI | CTGAAG | 7 cut(s) | 1932, 2037, 2409, 2633, 2718, 3143, 3807 |
| AdeI | CACNNNGTG | 1 cut(s) | 2709 |
| AfaI | GTAC | 7 cut(s) | 1945, 2568, 2744, 2909, 2956, 3382, 4167 |
| AfeI | AGCGCT | 1 cut(s) | 3794 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 207, 1611, 2728, 2870, 2971, 3550, 3869, 4381 |
| AgeI | ACCGGT | 1 cut(s) | 2628 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2629 |
| AjnI | CCWGG | 8 cut(s) | 171, 595, 2250, 2722, 2863, 3128, 3274, 3643 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1104, 1131, 1136, 1163, 1230, 1262, 1287, 1319 |
| Alw21I | GWGCWC | 1 cut(s) | 3411 |
| Alw26I | GTCTC | 1 cut(s) | 1925 |
| AlwI | GGATC | 3 cut(s) | 2713, 3950, 4076 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1955, 2336 |
| Ama87I | CYCGRG | 1 cut(s) | 4215 |
| Aor13HI | TCCGGA | 1 cut(s) | 2089 |
| Aor51HI | AGCGCT | 1 cut(s) | 3794 |
| AoxI | GGCC | 8 cut(s) | 53, 567, 1050, 1233, 1875, 2933, 3434, 3541 |
| ApeKI | GCWGC | 4 cut(s) | 810, 1768, 3056, 4417 |
| ApoI | RAATTY | 5 cut(s) | 1832, 2768, 2914, 3269, 3501 |
| AseI | ATTAAT | 3 cut(s) | 963, 1191, 2043 |
| AsiGI | ACCGGT | 1 cut(s) | 2628 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1740, 3261, 3728 |
| AspLEI | GCGC | 2 cut(s) | 3366, 3795 |
| AspS9I | GGNCC | 5 cut(s) | 165, 1602, 2934, 3444, 3496 |
| AsuC2I | CCSGG | 1 cut(s) | 2445 |
| AsuHPI | GGTGA | 8 cut(s) | 145, 1163, 1346, 2128, 2849, 3442, 3824, 3839 |
| AsuII | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| AvaI | CYCGRG | 1 cut(s) | 4215 |
| AvaII | GGWCC | 4 cut(s) | 165, 1602, 3444, 3496 |
| BaeGI | GKGCMC | 3 cut(s) | 1679, 1687, 3303 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 888, 921, 2509, 2542 |
| BanI | GGYRCC | 3 cut(s) | 1556, 1684, 3620 |
| BanII | GRGCYC | 2 cut(s) | 3193, 3411 |
| BauI | CACGAG | 1 cut(s) | 1678 |
| BbsI | GAAGAC | 3 cut(s) | 2064, 2628, 4240 |
| Bbv12I | GWGCWC | 1 cut(s) | 3411 |
| BbvI | GCAGC | 4 cut(s) | 822, 1780, 3068, 4429 |
| BceAI | ACGGC | 2 cut(s) | 1471, 2007 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3290, 3324 |
| BciT130I | CCWGG | 8 cut(s) | 173, 597, 2252, 2724, 2865, 3130, 3276, 3645 |
| BciVI | GTATCC | 2 cut(s) | 1905, 2510 |
| BclI | TGATCA | 1 cut(s) | 235 |
| BcnI | CCSGG | 1 cut(s) | 2445 |
| BcoDI | GTCTC | 1 cut(s) | 1925 |
| BfaI | CTAG | 3 cut(s) | 207, 1539, 2348 |
| BfmI | CTRYAG | 2 cut(s) | 1707, 3671 |
| BfoI | RGCGCY | 1 cut(s) | 3796 |
| BfuAI | ACCTGC | 2 cut(s) | 783, 3467 |
| BfuI | GTATCC | 2 cut(s) | 1905, 2510 |
| BisI | GCNGC | 4 cut(s) | 811, 1769, 3057, 4418 |
| BlsI | GCNGC | 4 cut(s) | 812, 1770, 3058, 4419 |
| Bme1390I | CCNGG | 9 cut(s) | 173, 597, 2252, 2445, 2724, 2865, 3130, 3276, 3645 |
| Bme18I | GGWCC | 4 cut(s) | 165, 1602, 3444, 3496 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2629 |
| BmeT110I | CYCGRG | 1 cut(s) | 4215 |
| BmgT120I | GGNCC | 5 cut(s) | 165, 1602, 2934, 3444, 3496 |
| BmiI | GGNNCC | 7 cut(s) | 1558, 1686, 2401, 2936, 3190, 3622, 4187 |
| BmrFI | CCNGG | 9 cut(s) | 173, 597, 2252, 2445, 2724, 2865, 3130, 3276, 3645 |
| BmrI | ACTGGG | 5 cut(s) | 1074, 1403, 1587, 3048, 3841 |
| BmsI | GCATC | 7 cut(s) | 1882, 2554, 2834, 3156, 4033, 4324, 4351 |
| BmuI | ACTGGG | 5 cut(s) | 1074, 1403, 1587, 3048, 3841 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3321 |
| BpiI | GAAGAC | 3 cut(s) | 2064, 2628, 4240 |
| BpmI | CTGGAG | 2 cut(s) | 403, 2797 |
| Bpu14I | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| BpuEI | CTTGAG | 2 cut(s) | 264, 4415 |
| BpuMI | CCSGG | 1 cut(s) | 2445 |
| Bsa29I | ATCGAT | 1 cut(s) | 1008 |
| BsaAI | YACGTR | 1 cut(s) | 2954 |
| BsaJI | CCNNGG | 7 cut(s) | 596, 2250, 2722, 3129, 3463, 3573, 3644 |
| BsaWI | WCCGGW | 3 cut(s) | 1604, 2089, 2628 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 207, 1611, 2728, 2870, 2971, 3550, 3869, 4381 |
| Bse118I | RCCGGY | 2 cut(s) | 2628, 4299 |
| Bse3DI | GCAATG | 6 cut(s) | 1096, 2170, 3319, 3491, 3535, 4110 |
| BseAI | TCCGGA | 1 cut(s) | 2089 |
| BseBI | CCWGG | 8 cut(s) | 173, 597, 2252, 2724, 2865, 3130, 3276, 3645 |
| BseCI | ATCGAT | 1 cut(s) | 1008 |
| BseDI | CCNNGG | 7 cut(s) | 596, 2250, 2722, 3129, 3463, 3573, 3644 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 207, 1611, 2728, 2870, 2971, 3550, 3869, 4381 |
| BseMI | GCAATG | 6 cut(s) | 1096, 2170, 3319, 3491, 3535, 4110 |
| BseMII | CTCAG | 5 cut(s) | 1773, 2328, 2474, 3672, 4004 |
| BseSI | GKGCMC | 3 cut(s) | 1679, 1687, 3303 |
| BseXI | GCAGC | 4 cut(s) | 822, 1780, 3068, 4429 |
| BseYI | CCCAGC | 2 cut(s) | 3533, 4271 |
| BsgI | GTGCAG | 3 cut(s) | 2006, 2301, 4436 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4386 |
| BshFI | GGCC | 8 cut(s) | 55, 569, 1052, 1235, 1877, 2935, 3436, 3543 |
| BshNI | GGYRCC | 3 cut(s) | 1556, 1684, 3620 |
| BshTI | ACCGGT | 1 cut(s) | 2628 |
| BshVI | ATCGAT | 1 cut(s) | 1008 |
| BsiEI | CGRYCG | 1 cut(s) | 4386 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3411 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4215 |
| BsiSI | CCGG | 5 cut(s) | 1605, 2090, 2445, 2629, 4300 |
| BslFI | GGGAC | 3 cut(s) | 2726, 3989, 4245 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 207, 1611, 2728, 2870, 2971, 3550, 3869, 4381 |
| BsmAI | GTCTC | 1 cut(s) | 1925 |
| BsmBI | CGTCTC | 1 cut(s) | 1925 |
| BsmFI | GGGAC | 3 cut(s) | 2726, 3989, 4245 |
| BsmI | GAATGC | 5 cut(s) | 778, 877, 1637, 1861, 3340 |
| BsnI | GGCC | 8 cut(s) | 55, 569, 1052, 1235, 1877, 2935, 3436, 3543 |
| BsoBI | CYCGRG | 1 cut(s) | 4215 |
| Bsp119I | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1679, 1687, 3193, 3303, 3411 |
| Bsp13I | TCCGGA | 1 cut(s) | 2089 |
| BspACI | CCGC | 6 cut(s) | 320, 1403, 1644, 3424, 3551, 4382 |
| BspANI | GGCC | 8 cut(s) | 55, 569, 1052, 1235, 1877, 2935, 3436, 3543 |
| BspCNI | CTCAG | 5 cut(s) | 1774, 2329, 2473, 3671, 4003 |
| BspDI | ATCGAT | 1 cut(s) | 1008 |
| BspEI | TCCGGA | 1 cut(s) | 2089 |
| BspHI | TCATGA | 6 cut(s) | 793, 892, 1000, 1183, 1366, 3805 |
| BspLI | GGNNCC | 7 cut(s) | 1558, 1686, 2401, 2936, 3190, 3622, 4187 |
| BspMI | ACCTGC | 2 cut(s) | 783, 3467 |
| BspPI | GGATC | 3 cut(s) | 2713, 3950, 4076 |
| BspQI | GCTCTTC | 1 cut(s) | 3783 |
| BspT104I | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| BspT107I | GGYRCC | 3 cut(s) | 1556, 1684, 3620 |
| BsrDI | GCAATG | 6 cut(s) | 1096, 2170, 3319, 3491, 3535, 4110 |
| BsrFI | RCCGGY | 2 cut(s) | 2628, 4299 |
| BssAI | RCCGGY | 2 cut(s) | 2628, 4299 |
| BssECI | CCNNGG | 7 cut(s) | 596, 2250, 2722, 3129, 3463, 3573, 3644 |
| BssSI | CACGAG | 1 cut(s) | 1678 |
| BssT1I | CCWWGG | 2 cut(s) | 3463, 3573 |
| Bst2BI | CACGAG | 1 cut(s) | 1678 |
| Bst2UI | CCWGG | 8 cut(s) | 173, 597, 2252, 2724, 2865, 3130, 3276, 3645 |
| Bst4CI | ACNGT | 8 cut(s) | 128, 613, 1711, 2097, 2223, 2707, 3171, 3421 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3887 |
| BstBAI | YACGTR | 1 cut(s) | 2954 |
| BstBI | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| BstC8I | GCNNGC | 7 cut(s) | 1996, 2859, 2933, 3061, 3570, 4206, 4301 |
| BstDEI | CTNAG | 9 cut(s) | 938, 1764, 1782, 1872, 2337, 2460, 2785, 3658, 3990 |
| BstEII | GGTNACC | 1 cut(s) | 1701 |
| BstH2I | RGCGCY | 1 cut(s) | 3796 |
| BstHHI | GCGC | 2 cut(s) | 3366, 3795 |
| BstMAI | GTCTC | 1 cut(s) | 1925 |
| BstMCI | CGRYCG | 1 cut(s) | 4386 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1721, 3516, 3525, 3637, 3887, 4109 |
| BstNI | CCWGG | 8 cut(s) | 173, 597, 2252, 2724, 2865, 3130, 3276, 3645 |
| BstNSI | RCATGY | 2 cut(s) | 2861, 3982 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3321 |
| BstPI | GGTNACC | 1 cut(s) | 1701 |
| BstSCI | CCNGG | 9 cut(s) | 171, 595, 2250, 2443, 2722, 2863, 3128, 3274, 3643 |
| BstSFI | CTRYAG | 2 cut(s) | 1707, 3671 |
| BstSLI | GKGCMC | 3 cut(s) | 1679, 1687, 3303 |
| BstV1I | GCAGC | 4 cut(s) | 822, 1780, 3068, 4429 |
| BstV2I | GAAGAC | 3 cut(s) | 2064, 2628, 4240 |
| Bsu15I | ATCGAT | 1 cut(s) | 1008 |
| BsuI | GTATCC | 2 cut(s) | 1905, 2510 |
| BsuRI | GGCC | 8 cut(s) | 55, 569, 1052, 1235, 1877, 2935, 3436, 3543 |
| BsuTUI | ATCGAT | 1 cut(s) | 1008 |
| BtsI | GCAGTG | 1 cut(s) | 1465 |
| BveI | ACCTGC | 2 cut(s) | 783, 3467 |
| Cac8I | GCNNGC | 7 cut(s) | 1996, 2859, 2933, 3061, 3570, 4206, 4301 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1955, 2336 |
| CciI | TCATGA | 6 cut(s) | 793, 892, 1000, 1183, 1366, 3805 |
| CfoI | GCGC | 2 cut(s) | 3366, 3795 |
| Cfr10I | RCCGGY | 2 cut(s) | 2628, 4299 |
| Cfr13I | GGNCC | 5 cut(s) | 165, 1602, 2934, 3444, 3496 |
| ClaI | ATCGAT | 1 cut(s) | 1008 |
| CseI | GACGC | 1 cut(s) | 1942 |
| Csp6I | GTAC | 7 cut(s) | 1944, 2567, 2743, 2908, 2955, 3381, 4166 |
| CspAI | ACCGGT | 1 cut(s) | 2628 |
| CviQI | GTAC | 7 cut(s) | 1944, 2567, 2743, 2908, 2955, 3381, 4166 |
| DdeI | CTNAG | 9 cut(s) | 938, 1764, 1782, 1872, 2337, 2460, 2785, 3658, 3990 |
| DraI | TTTAAA | 1 cut(s) | 3345 |
| DraIII | CACNNNGTG | 1 cut(s) | 2709 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2629 |
| EaeI | YGGCCR | 2 cut(s) | 1050, 1233 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2629 |
| Ecl136II | GAGCTC | 1 cut(s) | 3409 |
| Eco130I | CCWWGG | 2 cut(s) | 3463, 3573 |
| Eco147I | AGGCCT | 1 cut(s) | 55 |
| Eco24I | GRGCYC | 2 cut(s) | 3193, 3411 |
| Eco32I | GATATC | 1 cut(s) | 1006 |
| Eco47I | GGWCC | 4 cut(s) | 165, 1602, 3444, 3496 |
| Eco47III | AGCGCT | 1 cut(s) | 3794 |
| Eco53kI | GAGCTC | 1 cut(s) | 3409 |
| Eco57I | CTGAAG | 7 cut(s) | 1932, 2037, 2409, 2633, 2718, 3143, 3807 |
| Eco88I | CYCGRG | 1 cut(s) | 4215 |
| Eco91I | GGTNACC | 1 cut(s) | 1701 |
| EcoICRI | GAGCTC | 1 cut(s) | 3409 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2934 |
| EcoO65I | GGTNACC | 1 cut(s) | 1701 |
| EcoRII | CCWGG | 8 cut(s) | 171, 595, 2250, 2722, 2863, 3128, 3274, 3643 |
| EcoRV | GATATC | 1 cut(s) | 1006 |
| EcoT14I | CCWWGG | 2 cut(s) | 3463, 3573 |
| EcoT22I | ATGCAT | 1 cut(s) | 2849 |
| EcoT38I | GRGCYC | 2 cut(s) | 3193, 3411 |
| ErhI | CCWWGG | 2 cut(s) | 3463, 3573 |
| Esp3I | CGTCTC | 1 cut(s) | 1925 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3624, 3656, 4232, 4264 |
| FaqI | GGGAC | 3 cut(s) | 2726, 3989, 4245 |
| FauI | CCCGC | 1 cut(s) | 1396 |
| FauNDI | CATATG | 5 cut(s) | 189, 1846, 2074, 2466, 2522 |
| FbaI | TGATCA | 1 cut(s) | 235 |
| Fnu4HI | GCNGC | 4 cut(s) | 811, 1769, 3057, 4418 |
| FriOI | GRGCYC | 2 cut(s) | 3193, 3411 |
| Fsp4HI | GCNGC | 4 cut(s) | 811, 1769, 3057, 4418 |
| FspBI | CTAG | 3 cut(s) | 207, 1539, 2348 |
| GlaI | GCGC | 2 cut(s) | 3365, 3794 |
| GluI | GCNGC | 4 cut(s) | 811, 1769, 3057, 4418 |
| GsaI | CCCAGC | 2 cut(s) | 3537, 4275 |
| GsuI | CTGGAG | 2 cut(s) | 403, 2797 |
| HaeII | RGCGCY | 1 cut(s) | 3796 |
| HaeIII | GGCC | 8 cut(s) | 55, 569, 1052, 1235, 1877, 2935, 3436, 3543 |
| HapII | CCGG | 5 cut(s) | 1605, 2090, 2445, 2629, 4300 |
| HgaI | GACGC | 1 cut(s) | 1942 |
| HhaI | GCGC | 2 cut(s) | 3366, 3795 |
| Hin6I | GCGC | 2 cut(s) | 3364, 3793 |
| HinP1I | GCGC | 2 cut(s) | 3364, 3793 |
| HindIII | AAGCTT | 1 cut(s) | 3638 |
| HpaII | CCGG | 5 cut(s) | 1605, 2090, 2445, 2629, 4300 |
| HphI | GGTGA | 8 cut(s) | 145, 1163, 1346, 2128, 2849, 3442, 3824, 3839 |
| Hpy166II | GTNNAC | 3 cut(s) | 609, 1976, 3613 |
| Hpy8I | GTNNAC | 3 cut(s) | 609, 1976, 3613 |
| HpyCH4III | ACNGT | 8 cut(s) | 128, 613, 1711, 2097, 2223, 2707, 3171, 3421 |
| HpyCH4IV | ACGT | 3 cut(s) | 103, 1591, 2953 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1721, 3516, 3525, 3637, 3887, 4109 |
| HpyF3I | CTNAG | 9 cut(s) | 938, 1764, 1782, 1872, 2337, 2460, 2785, 3658, 3990 |
| HpySE526I | ACGT | 3 cut(s) | 103, 1591, 2953 |
| HspAI | GCGC | 2 cut(s) | 3364, 3793 |
| Kpn2I | TCCGGA | 1 cut(s) | 2089 |
| KroI | GCCGGC | 1 cut(s) | 4299 |
| KroNI | GCCGGC | 1 cut(s) | 4301 |
| Ksp22I | TGATCA | 1 cut(s) | 235 |
| LguI | GCTCTTC | 1 cut(s) | 3783 |
| Lsp1109I | GCAGC | 4 cut(s) | 822, 1780, 3068, 4429 |
| LweI | GCATC | 7 cut(s) | 1882, 2554, 2834, 3156, 4033, 4324, 4351 |
| MaeI | CTAG | 3 cut(s) | 207, 1539, 2348 |
| MaeII | ACGT | 3 cut(s) | 103, 1591, 2953 |
| MaeIII | GTNAC | 8 cut(s) | 551, 1701, 2223, 2455, 3323, 3757, 3812, 3827 |
| MhlI | GDGCHC | 5 cut(s) | 1679, 1687, 3193, 3303, 3411 |
| MlyI | GAGTC | 9 cut(s) | 33, 145, 206, 614, 1529, 2426, 2872, 3331, 3882 |
| MmeI | TCCRAC | 4 cut(s) | 192, 1567, 2793, 4129 |
| Mph1103I | ATGCAT | 1 cut(s) | 2849 |
| MroI | TCCGGA | 1 cut(s) | 2089 |
| MroNI | GCCGGC | 1 cut(s) | 4299 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1740, 3261, 3728 |
| MslI | CAYNNNNRTG | 3 cut(s) | 192, 2754, 3810 |
| MspI | CCGG | 5 cut(s) | 1605, 2090, 2445, 2629, 4300 |
| MspR9I | CCNGG | 9 cut(s) | 173, 597, 2252, 2445, 2724, 2865, 3130, 3276, 3645 |
| Mva1269I | GAATGC | 5 cut(s) | 778, 877, 1637, 1861, 3340 |
| MvaI | CCWGG | 8 cut(s) | 173, 597, 2252, 2724, 2865, 3130, 3276, 3645 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1721, 3516, 3525, 3637, 3887, 4109 |
| NaeI | GCCGGC | 1 cut(s) | 4301 |
| NciI | CCSGG | 1 cut(s) | 2445 |
| NdeI | CATATG | 5 cut(s) | 189, 1846, 2074, 2466, 2522 |
| NgoMIV | GCCGGC | 1 cut(s) | 4299 |
| NlaIV | GGNNCC | 7 cut(s) | 1558, 1686, 2401, 2936, 3190, 3622, 4187 |
| NmeAIII | GCCGAG | 1 cut(s) | 3691 |
| NmuCI | GTSAC | 3 cut(s) | 3323, 3812, 3827 |
| NsiI | ATGCAT | 1 cut(s) | 2849 |
| NspI | RCATGY | 2 cut(s) | 2861, 3982 |
| NspV | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| PaeI | GCATGC | 1 cut(s) | 2861 |
| PagI | TCATGA | 6 cut(s) | 793, 892, 1000, 1183, 1366, 3805 |
| PceI | AGGCCT | 1 cut(s) | 55 |
| PciSI | GCTCTTC | 1 cut(s) | 3783 |
| PctI | GAATGC | 5 cut(s) | 778, 877, 1637, 1861, 3340 |
| PdiI | GCCGGC | 1 cut(s) | 4301 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1740, 3261, 3728 |
| PflFI | GACNNNGTC | 1 cut(s) | 2375 |
| PinAI | ACCGGT | 1 cut(s) | 2628 |
| PkrI | GCNGC | 4 cut(s) | 812, 1770, 3058, 4419 |
| PleI | GAGTC | 9 cut(s) | 32, 144, 205, 613, 1528, 2426, 2872, 3330, 3881 |
| PpsI | GAGTC | 9 cut(s) | 32, 144, 205, 613, 1528, 2426, 2872, 3330, 3881 |
| Ppu21I | YACGTR | 1 cut(s) | 2954 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3321 |
| PshBI | ATTAAT | 3 cut(s) | 963, 1191, 2043 |
| Psp124BI | GAGCTC | 1 cut(s) | 3411 |
| Psp1406I | AACGTT | 1 cut(s) | 103 |
| Psp6I | CCWGG | 8 cut(s) | 171, 595, 2250, 2722, 2863, 3128, 3274, 3643 |
| PspEI | GGTNACC | 1 cut(s) | 1701 |
| PspFI | CCCAGC | 2 cut(s) | 3533, 4271 |
| PspGI | CCWGG | 8 cut(s) | 171, 595, 2250, 2722, 2863, 3128, 3274, 3643 |
| PspN4I | GGNNCC | 7 cut(s) | 1558, 1686, 2401, 2936, 3190, 3622, 4187 |
| PspPI | GGNCC | 5 cut(s) | 165, 1602, 2934, 3444, 3496 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1955, 2336 |
| PsyI | GACNNNGTC | 1 cut(s) | 2375 |
| RsaI | GTAC | 7 cut(s) | 1945, 2568, 2744, 2909, 2956, 3382, 4167 |
| RsaNI | GTAC | 7 cut(s) | 1944, 2567, 2743, 2908, 2955, 3381, 4166 |
| RseI | CAYNNNNRTG | 3 cut(s) | 192, 2754, 3810 |
| SacI | GAGCTC | 1 cut(s) | 3411 |
| SapI | GCTCTTC | 1 cut(s) | 3783 |
| SatI | GCNGC | 4 cut(s) | 811, 1769, 3057, 4418 |
| Sau96I | GGNCC | 5 cut(s) | 165, 1602, 2934, 3444, 3496 |
| SchI | GAGTC | 9 cut(s) | 33, 145, 206, 614, 1529, 2426, 2872, 3331, 3882 |
| ScrFI | CCNGG | 9 cut(s) | 173, 597, 2252, 2445, 2724, 2865, 3130, 3276, 3645 |
| SduI | GDGCHC | 5 cut(s) | 1679, 1687, 3193, 3303, 3411 |
| SfaNI | GCATC | 7 cut(s) | 1882, 2554, 2834, 3156, 4033, 4324, 4351 |
| SfcI | CTRYAG | 2 cut(s) | 1707, 3671 |
| SfuI | TTCGAA | 4 cut(s) | 1133, 1316, 3237, 4346 |
| SinI | GGWCC | 4 cut(s) | 165, 1602, 3444, 3496 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 192, 2754, 3810 |
| SmlI | CTYRAG | 2 cut(s) | 279, 4430 |
| SmoI | CTYRAG | 2 cut(s) | 279, 4430 |
| SphI | GCATGC | 1 cut(s) | 2861 |
| SseBI | AGGCCT | 1 cut(s) | 55 |
| SsiI | CCGC | 6 cut(s) | 320, 1403, 1644, 3424, 3551, 4382 |
| SspMI | CTAG | 3 cut(s) | 207, 1539, 2348 |
| SstI | GAGCTC | 1 cut(s) | 3411 |
| StuI | AGGCCT | 1 cut(s) | 55 |
| StyD4I | CCNGG | 9 cut(s) | 171, 595, 2250, 2443, 2722, 2863, 3128, 3274, 3643 |
| StyI | CCWWGG | 2 cut(s) | 3463, 3573 |
| TaaI | ACNGT | 8 cut(s) | 128, 613, 1711, 2097, 2223, 2707, 3171, 3421 |
| TaiI | ACGT | 3 cut(s) | 106, 1594, 2956 |
| TatI | WGTACW | 1 cut(s) | 4165 |
| TseFI | GTSAC | 3 cut(s) | 3323, 3812, 3827 |
| TseI | GCWGC | 4 cut(s) | 810, 1768, 3056, 4417 |
| Tsp45I | GTSAC | 3 cut(s) | 3323, 3812, 3827 |
| TspGWI | ACGGA | 1 cut(s) | 1708 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2375 |
| VpaK11BI | GGWCC | 4 cut(s) | 165, 1602, 3444, 3496 |
| VspI | ATTAAT | 3 cut(s) | 963, 1191, 2043 |
| XapI | RAATTY | 5 cut(s) | 1832, 2768, 2914, 3269, 3501 |
| XceI | RCATGY | 2 cut(s) | 2861, 3982 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1740, 3261, 3728 |
| XspI | CTAG | 3 cut(s) | 207, 1539, 2348 |
| Zsp2I | ATGCAT | 1 cut(s) | 2849 |