RLG00000003308

SNF2 domain-containing protein CLASSY

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
46968411 .. 46973522
5112 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003308

Sequence Viewer

Length: 3012 bp
ATGTTTGACCATAGCTTGCCTATAGCTAGTAGAACAAGGAAGGGGCAGGAGAGGGTTTACAAGGAGTTCAATGAGAAAAAGAAGCAGAAGAAGAAGAATGAGGATGGCTCGGCGCCCACTGATTTTGAGAAATTGGGGTCTGACTGCATAGTTCTTTCGGATGATAGCATGGAGGATGGCGGTTCAGAGGGTTCTGATTTAGAAAAGAGTGCCGCAAAGGGAAGTGAGAAGGTGGGGAAAGGGGGGAGTGTGGAGGTTGGGAGTGTCAAGACAAGTACAGGGTTAGAAGTGGATTTGTCAGCCAATTCTGTAGCTGATTTGGATGCTGGTGACAGTGAAGGTGTGAAAGTCATTAGTTCGGTTAGTGATAGTGATGATGAGGCGGTGTCAATAAGTGAAGAGGGAGGTGGAGGAGACTCTGACGGTGATAAGGATAGTGATTCGAGAAGTGTAGATTCAGACAGTGAACACAATGTGTACTCGGCTGATGATGATGATGATGAAGATGATATTGAAAGCATCTCTTCAGATGATTATGCAAGTGATTATTCGAATAATGAGGGACCGGTTAATTTAGATTGTCAAACTGAGGATGCGGACAGAAGTGGGGGAGAGGGAGAAAAGAGGGATGATGTTGATGGCAATCACTGCAGTAGTCAGACAAATAGGCGTCCTAAAATGAAGTCAAAGTGCAACAATAGAAGAAGTGGTGACAATGATGAGACCTATCCTTGCAGTCTGAACAATGGGCGTGATAAATGGAATGATGTGCAGGAAGCGGGGAGTGTGGAGGTCGGGGGTGTCGAGACGAGTACAACGTTAGGAGTGGATTTGTCAGCCGATTCTGTAGCTGATTTGGATGATGGTAACAGTGAAGGTGTGAAAGTGATTAGTTTGGTTAGTGATAGTGATGAAGAGGGTGGTGGAGGAGACTCTGGCAGTGATAAGGATAAGGGACCTGTTAATTTAGATTGTGAAACTAAGGATGCGGAGAGAAGCGGGAGAGAGGGAGAAAAGGTTGGTATTTGTCAAAAGAGAAAGAGAGACATTGGAGAGGATGGTCAAAAGTTCAATTGTGTAGCACAGCGTACTCAGTCACGGTCTACAATTCACTCTTCTGGCAATGATGATCAGAAGGATGATGTTGATGACAATCACTGCAGTAGTCAGACAAATAGGCGTCATAAAATGAATTCAAAGTGCAACAATAGAAGAAGTGGTGACAATGATGAGACCTATGCTTTCAGTCTGAACAATGGGAGTGATAAATGGAAAGATGTGCAGAAAGCAACTCAAAAGAATGGAGATTCGATTTATGAGGATGGAGAATTGCCTCCAGAAGGGTCAGCTTCCTTTGGGGATAAAACCGTTAAAAATGGAACTCTTCCGTTGAAGTTCTCATTTGGTGAGCCGCCAAGTATTGTTCCAGTAGAGAAGTCAGATTGTGAGAAAGAACTAGAGAACCTTTTTAAAGAAACGCGATTTGCTATTAGATCTGCTCAGATTGGTTCTACTGACTATAGTGAGGTTGAAATTAATGACACATTCCTCCAGTTAAGGACGTTACTCAGCATATGCTTTATCAAGTATATTGTACCAGAGATTGCTCCAAACCCTTATGGACGATCTGCCAGGAGATTTTATGAAGAAGACAACCGGTCTATTCCTGATGAGCTACAATGTCATGACTCTGGGTCTGGCTTTAATTCCCATGCTCATGTTGATGGCGGGGTATGGGACTTAATTCCTGGTGTTAAAAGTAGTGTGTATCCTCATCAGCGTGGGGGTTTTGAATTTATTTGGAGTCATATAGCCGGTGGAATTCATCTTGAAAAGTTGCAGAAGACAAGTAGTGCTGATGGTGGGGGTGGACGCATAATATCACATGCACCTGGAACAGGGAAGACACGTCTGACCATTGTCTTTCTTCAGGCATACATGAGATTCAACCCAAAATGCAGGCCAATGATAATTGCTCTCGTACCATGCTTCTCACCTGGGAAGAGGAGTTTTAAAAATGGGGCTTCGTTGTTCCCTTTCACAATCTCAACAATCAGAATGGGGGTCCTGCGCCATGTGAGAAGTGTGGATGGTAGTCGTTGGTTGAAGTTATGTTCCTGGAAAAAGGAAAGAAGCATCCTTGGAATTAGTTACAGACTTTTTGAGAAACTTTCTACCGCGCATAATTCTGGAGGCCAGAAAGCTGACCTAGCTAAGACAATGAGGAATATTCTATTAGACTTTCCTGGTATTGTAGCTTCATCAAATATCAAAAGACATAGATGTATTATTCTTTCAGGAACTCCTTTTCAAAACAATTTTGATGAGCTGTACAATACAATTTGCTTGGCAAGGCCAGACTGGATCAGGCCTACTGAAGGTGCCAGTGATAAAGCAAAACAAGCTGAGGAAATAGGAGCTAGAATTGCTCCAATTGTGCATGTTTACAGAGGTTCCATACTACAAGATACACTTCCCAGGTTGAGGGAAAAGTTTGTGATTGAACTCATACGGTTTAGTGATGCTATGAATGAAAGAGTTCTGCTTTTGAAATCTCAGTTTCAATGGACTGAAGGGGAAGAGATTCTGTATATGTATGGAGCTGATGATGAAAAGCAGCGCCAATCATCAATGAAGGTTTTCAATGATCCATCAAGCAGAGCCAAGGTATTATTAGCCTCAACAAAAGGTTGTAACGAAGGAATGAATATAGTCGGAGCTTCAAGGGTTAGGCAAGCTATATACCGAGCATACCGATTGGGACAGAAGAAAATTGTGTTCATCTACCATCTTCTCATTGCTGGGGCAAGAGAAGAGGACAAACACAGTAAGCAAGTTGAGAAGCATCATCTGTCTGAATTGGTATTTTCTTGTTCTGATACGGAAGCTGCCAAGAAAATCCCAGCTGCGGGCGCAGAGGACAAGATTTTGGAAGAGATGGTTCAGCATGAGAAACTCAAGCATATATTTGAAAAGATAACATTCCTGGATGAAGCCTCATGTTTTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1004

Amino Acids

110.5

Weight (kDa)

5.22

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 112, 2381
AccI GTMKAC 1 cut(s) 1103
AccII CGCG 2 cut(s) 1480, 2180
AclI AACGTT 1 cut(s) 818
AclWI GGATC 2 cut(s) 2372, 2642
AcsI RAATTY 3 cut(s) 1192, 1793, 1821
AcuI CTGAAG 4 cut(s) 510, 1913, 2397, 2592
AcyI GRCGYC 3 cut(s) 113, 670, 1180
AdeI CACNNNGTG 1 cut(s) 475
AfaI GTAC 7 cut(s) 277, 479, 814, 1090, 1596, 1983, 2333
AfiI CCNNNNNNNGG 6 cut(s) 1340, 1898, 2378, 2484, 2908, 2909
AflIII ACRYGT 1 cut(s) 1907
AgeI ACCGGT 2 cut(s) 565, 1656
AhdI GACNNNNNGTC 2 cut(s) 1657, 1693
AjiI CACGTC 1 cut(s) 1910
AjnI CCWGG 8 cut(s) 1631, 1747, 1891, 1996, 2117, 2245, 2477, 2985
Alw26I GTCTC 6 cut(s) 408, 716, 800, 924, 1038, 1226
AlwI GGATC 2 cut(s) 2372, 2642
AoxI GGCC 4 cut(s) 1961, 2194, 2354, 2369
ApeKI GCWGC 3 cut(s) 2617, 2888, 2906
ApoI RAATTY 3 cut(s) 1192, 1793, 1821
AseI ATTAAT 1 cut(s) 1536
AsiGI ACCGGT 2 cut(s) 565, 1656
Asp700I GAANNNNTTC 3 cut(s) 2538, 2583, 2639
AspLEI GCGC 5 cut(s) 115, 2073, 2182, 2622, 2915
AspS9I GGNCC 3 cut(s) 563, 956, 2065
AsuHPI GGTGA 6 cut(s) 341, 437, 722, 1232, 1418, 1986
AsuII TTCGAA 1 cut(s) 551
AvaII GGWCC 3 cut(s) 563, 956, 2065
BanI GGYRCC 2 cut(s) 112, 2381
BarI GAAGNNNNNNTAC 2 cut(s) 2242, 2274
BbsI GAAGAC 3 cut(s) 1656, 1850, 1910
BbvCI CCTCAGC 1 cut(s) 2406
BbvI GCAGC 3 cut(s) 2629, 2875, 2893
BciT130I CCWGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
BciVI GTATCC 1 cut(s) 1779
BclI TGATCA 1 cut(s) 1129
BcoDI GTCTC 6 cut(s) 408, 716, 800, 924, 1038, 1226
BfaI CTAG 4 cut(s) 27, 1457, 2210, 2421
BfmI CTRYAG 6 cut(s) 21, 309, 649, 846, 1159, 1519
BfoI RGCGCY 2 cut(s) 116, 2623
BfuI GTATCC 1 cut(s) 1779
BglII AGATCT 1 cut(s) 1493
BisI GCNGC 5 cut(s) 213, 1412, 2618, 2889, 2907
BlsI GCNGC 5 cut(s) 214, 1413, 2619, 2890, 2908
Bme1390I CCNGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
Bme18I GGWCC 3 cut(s) 563, 956, 2065
BmeRI GACNNNNNGTC 2 cut(s) 1657, 1693
BmgBI CACGTC 1 cut(s) 1910
BmgT120I GGNCC 3 cut(s) 563, 956, 2065
BmiI GGNNCC 6 cut(s) 114, 564, 957, 2066, 2383, 2455
BmrFI CCNGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
BmsI GCATC 7 cut(s) 313, 528, 583, 976, 2145, 2512, 2854
BoxI GACNNNNGTC 1 cut(s) 1919
BpiI GAAGAC 3 cut(s) 1656, 1850, 1910
BplI GAGNNNNNCTC 2 cut(s) 92, 124
BpmI CTGGAG 3 cut(s) 1320, 1535, 2211
Bpu10I CCTNAGC 1 cut(s) 2406
Bpu14I TTCGAA 1 cut(s) 551
BpuEI CTTGAG 1 cut(s) 2942
BsaBI GATNNNNATC 2 cut(s) 642, 1152
BsaHI GRCGYC 3 cut(s) 113, 670, 1180
BsaI GGTCTC 2 cut(s) 716, 1226
BsaJI CCNNGG 4 cut(s) 1997, 2140, 2477, 2664
BsaWI WCCGGW 2 cut(s) 565, 1656
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 6 cut(s) 1340, 1898, 2378, 2484, 2908, 2909
Bse118I RCCGGY 3 cut(s) 565, 1656, 1814
Bse1I ACTGG 4 cut(s) 1427, 1552, 2366, 2385
Bse3DI GCAATG 2 cut(s) 1129, 2796
Bse8I GATNNNNATC 2 cut(s) 642, 1152
BseBI CCWGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
BseDI CCNNGG 4 cut(s) 1997, 2140, 2477, 2664
BseJI GATNNNNATC 2 cut(s) 642, 1152
BseLI CCNNNNNNNGG 6 cut(s) 1340, 1898, 2378, 2484, 2908, 2909
BseMI GCAATG 2 cut(s) 1129, 2796
BseMII CTCAG 6 cut(s) 579, 1106, 1514, 1582, 2397, 2570
BseNI ACTGG 4 cut(s) 1427, 1552, 2366, 2385
BseRI GAGGAG 3 cut(s) 426, 942, 2020
BseXI GCAGC 3 cut(s) 2629, 2875, 2893
BseYI CCCAGC 2 cut(s) 2801, 2902
BsgI GTGCAG 2 cut(s) 791, 1301
Bsh1236I CGCG 2 cut(s) 1480, 2180
BshFI GGCC 4 cut(s) 1963, 2196, 2356, 2371
BshNI GGYRCC 2 cut(s) 112, 2381
BshTI ACCGGT 2 cut(s) 565, 1656
BsiSI CCGG 3 cut(s) 566, 1657, 1815
BslFI GGGAC 4 cut(s) 576, 969, 1751, 2775
BslI CCNNNNNNNGG 6 cut(s) 1340, 1898, 2378, 2484, 2908, 2909
BsmAI GTCTC 6 cut(s) 408, 716, 800, 924, 1038, 1226
BsmBI CGTCTC 1 cut(s) 800
BsmFI GGGAC 4 cut(s) 576, 969, 1751, 2775
BsnI GGCC 4 cut(s) 1963, 2196, 2356, 2371
Bso31I GGTCTC 2 cut(s) 716, 1226
Bsp119I TTCGAA 1 cut(s) 551
Bsp1407I TGTACA 1 cut(s) 2331
Bsp143I GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
BspANI GGCC 4 cut(s) 1963, 2196, 2356, 2371
BspCNI CTCAG 6 cut(s) 580, 1105, 1513, 1581, 2398, 2569
BspFNI CGCG 2 cut(s) 1480, 2180
BspHI TCATGA 1 cut(s) 1684
BspLI GGNNCC 6 cut(s) 114, 564, 957, 2066, 2383, 2455
BspMAI CTGCAG 2 cut(s) 653, 1163
BspPI GGATC 2 cut(s) 2372, 2642
BspT104I TTCGAA 1 cut(s) 551
BspT107I GGYRCC 2 cut(s) 112, 2381
BspTNI GGTCTC 2 cut(s) 716, 1226
BsrDI GCAATG 2 cut(s) 1129, 2796
BsrFI RCCGGY 3 cut(s) 565, 1656, 1814
BsrGI TGTACA 1 cut(s) 2331
BsrI ACTGG 4 cut(s) 1427, 1552, 2366, 2385
BssAI RCCGGY 3 cut(s) 565, 1656, 1814
BssECI CCNNGG 4 cut(s) 1997, 2140, 2477, 2664
BssMI GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
BssNI GRCGYC 3 cut(s) 113, 670, 1180
BssT1I CCWWGG 2 cut(s) 2140, 2664
Bst2UI CCWGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
Bst4CI ACNGT 8 cut(s) 335, 425, 464, 872, 1101, 1369, 2514, 2828
Bst6I CTCTTC 9 cut(s) 393, 529, 909, 1120, 1389, 1997, 2574, 2808, 2928
BstACI GRCGYC 3 cut(s) 113, 670, 1180
BstAPI GCANNNNNTGC 1 cut(s) 648
BstAUI TGTACA 1 cut(s) 2331
BstBI TTCGAA 1 cut(s) 551
BstC8I GCNNGC 4 cut(s) 17, 1961, 2736, 2911
BstDEI CTNAG 8 cut(s) 588, 981, 1092, 1500, 1568, 2214, 2406, 2556
BstENI CCTNNNNNAGG 3 cut(s) 1338, 1896, 2376
BstFNI CGCG 2 cut(s) 1480, 2180
BstH2I RGCGCY 2 cut(s) 116, 2623
BstHHI GCGC 5 cut(s) 115, 2073, 2182, 2622, 2915
BstKTI GATC 5 cut(s) 1132, 1496, 1628, 2367, 2650
BstMAI GTCTC 6 cut(s) 408, 716, 800, 924, 1038, 1226
BstMBI GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
BstMWI GCNNNNNNNGC 5 cut(s) 648, 2210, 2402, 2426, 2912
BstNI CCWGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
BstNSI RCATGY 2 cut(s) 1889, 2444
BstPAI GACNNNNGTC 1 cut(s) 1919
BstSCI CCNGG 8 cut(s) 1631, 1747, 1891, 1996, 2117, 2245, 2477, 2985
BstSFI CTRYAG 6 cut(s) 21, 309, 649, 846, 1159, 1519
BstUI CGCG 2 cut(s) 1480, 2180
BstV1I GCAGC 3 cut(s) 2629, 2875, 2893
BstV2I GAAGAC 3 cut(s) 1656, 1850, 1910
BstX2I RGATCY 1 cut(s) 1493
BstYI RGATCY 1 cut(s) 1493
BsuI GTATCC 1 cut(s) 1779
BsuRI GGCC 4 cut(s) 1963, 2196, 2356, 2371
BtrI CACGTC 1 cut(s) 1910
BtsI GCAGTG 3 cut(s) 646, 946, 1156
BtsIMutI CAGTG 8 cut(s) 117, 340, 469, 646, 877, 946, 1156, 2392
Cac8I GCNNGC 4 cut(s) 17, 1961, 2736, 2911
CciI TCATGA 1 cut(s) 1684
CfoI GCGC 5 cut(s) 115, 2073, 2182, 2622, 2915
Cfr10I RCCGGY 3 cut(s) 565, 1656, 1814
Cfr13I GGNCC 3 cut(s) 563, 956, 2065
CseI GACGC 3 cut(s) 659, 1169, 1881
Csp6I GTAC 7 cut(s) 276, 478, 813, 1089, 1595, 1982, 2332
CspAI ACCGGT 2 cut(s) 565, 1656
CspCI CAANNNNNGTGG 2 cut(s) 106, 141
CviQI GTAC 7 cut(s) 276, 478, 813, 1089, 1595, 1982, 2332
DdeI CTNAG 8 cut(s) 588, 981, 1092, 1500, 1568, 2214, 2406, 2556
DinI GGCGCC 1 cut(s) 114
DpnI GATC 5 cut(s) 1131, 1495, 1627, 2366, 2649
DpnII GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
DraI TTTAAA 2 cut(s) 1471, 2014
DraIII CACNNNGTG 1 cut(s) 475
DriI GACNNNNNGTC 2 cut(s) 1657, 1693
Eam1104I CTCTTC 9 cut(s) 393, 529, 909, 1120, 1389, 1997, 2574, 2808, 2928
Eam1105I GACNNNNNGTC 2 cut(s) 1657, 1693
EarI CTCTTC 9 cut(s) 393, 529, 909, 1120, 1389, 1997, 2574, 2808, 2928
Eco130I CCWWGG 2 cut(s) 2140, 2664
Eco147I AGGCCT 1 cut(s) 2371
Eco31I GGTCTC 2 cut(s) 716, 1226
Eco47I GGWCC 3 cut(s) 563, 956, 2065
Eco57I CTGAAG 4 cut(s) 510, 1913, 2397, 2592
EcoNI CCTNNNNNAGG 3 cut(s) 1338, 1896, 2376
EcoO109I RGGNCCY 2 cut(s) 956, 2065
EcoRI GAATTC 2 cut(s) 1192, 1821
EcoRII CCWGG 8 cut(s) 1631, 1747, 1891, 1996, 2117, 2245, 2477, 2985
EcoT14I CCWWGG 2 cut(s) 2140, 2664
EgeI GGCGCC 1 cut(s) 114
EheI GGCGCC 1 cut(s) 114
ErhI CCWWGG 2 cut(s) 2140, 2664
Esp3I CGTCTC 1 cut(s) 800
FalI AAGNNNNNCTT 4 cut(s) 508, 540, 2457, 2489
FaqI GGGAC 4 cut(s) 576, 969, 1751, 2775
FauI CCCGC 4 cut(s) 772, 992, 1721, 2902
FauNDI CATATG 1 cut(s) 1574
FbaI TGATCA 1 cut(s) 1129
FblI GTMKAC 1 cut(s) 1103
Fnu4HI GCNGC 5 cut(s) 213, 1412, 2618, 2889, 2907
Fsp4HI GCNGC 5 cut(s) 213, 1412, 2618, 2889, 2907
FspBI CTAG 4 cut(s) 27, 1457, 2210, 2421
GlaI GCGC 5 cut(s) 114, 2072, 2181, 2621, 2914
GluI GCNGC 5 cut(s) 213, 1412, 2618, 2889, 2907
GsaI CCCAGC 2 cut(s) 2805, 2906
GsuI CTGGAG 3 cut(s) 1320, 1535, 2211
HaeII RGCGCY 2 cut(s) 116, 2623
HaeIII GGCC 4 cut(s) 1963, 2196, 2356, 2371
HapII CCGG 3 cut(s) 566, 1657, 1815
HgaI GACGC 3 cut(s) 659, 1169, 1881
HhaI GCGC 5 cut(s) 115, 2073, 2182, 2622, 2915
Hin1I GRCGYC 3 cut(s) 113, 670, 1180
Hin6I GCGC 5 cut(s) 113, 2071, 2180, 2620, 2913
HinP1I GCGC 5 cut(s) 113, 2071, 2180, 2620, 2913
HpaII CCGG 3 cut(s) 566, 1657, 1815
HphI GGTGA 6 cut(s) 341, 437, 722, 1232, 1418, 1986
Hpy166II GTNNAC 6 cut(s) 58, 467, 478, 1104, 1871, 2446
Hpy188III TCNNGA 9 cut(s) 268, 444, 805, 1337, 1667, 1685, 1829, 2190, 2298
Hpy8I GTNNAC 6 cut(s) 58, 467, 478, 1104, 1871, 2446
HpyCH4III ACNGT 8 cut(s) 335, 425, 464, 872, 1101, 1369, 2514, 2828
HpyCH4IV ACGT 3 cut(s) 818, 1562, 1909
HpyF10VI GCNNNNNNNGC 5 cut(s) 648, 2210, 2402, 2426, 2912
HpyF3I CTNAG 8 cut(s) 588, 981, 1092, 1500, 1568, 2214, 2406, 2556
HpySE526I ACGT 3 cut(s) 818, 1562, 1909
Hsp92I GRCGYC 3 cut(s) 113, 670, 1180
HspAI GCGC 5 cut(s) 113, 2071, 2180, 2620, 2913
KasI GGCGCC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 1129
Kzo9I GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
LmnI GCTCC 5 cut(s) 1612, 2417, 2434, 2600, 2717
Lsp1109I GCAGC 3 cut(s) 2629, 2875, 2893
LweI GCATC 7 cut(s) 313, 528, 583, 976, 2145, 2512, 2854
MaeI CTAG 4 cut(s) 27, 1457, 2210, 2421
MaeII ACGT 3 cut(s) 818, 1562, 1909
MaeIII GTNAC 8 cut(s) 329, 710, 866, 1095, 1220, 1563, 2150, 2693
MalI GATC 5 cut(s) 1131, 1495, 1627, 2366, 2649
MboI GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
MfeI CAATTG 2 cut(s) 1072, 2433
MflI RGATCY 1 cut(s) 1493
Mly113I GGCGCC 1 cut(s) 113
MlyI GAGTC 4 cut(s) 410, 926, 1682, 1813
MmeI TCCRAC 1 cut(s) 2695
MroXI GAANNNNTTC 3 cut(s) 2538, 2583, 2639
MslI CAYNNNNRTG 3 cut(s) 1716, 1722, 1779
MspA1I CMGCKG 1 cut(s) 2906
MspI CCGG 3 cut(s) 566, 1657, 1815
MspR9I CCNGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
MunI CAATTG 2 cut(s) 1072, 2433
MvaI CCWGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
MvnI CGCG 2 cut(s) 1480, 2180
MwoI GCNNNNNNNGC 5 cut(s) 648, 2210, 2402, 2426, 2912
NarI GGCGCC 1 cut(s) 113
NdeI CATATG 1 cut(s) 1574
NdeII GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
NlaIV GGNNCC 6 cut(s) 114, 564, 957, 2066, 2383, 2455
NmeAIII GCCGAG 2 cut(s) 89, 461
NmuCI GTSAC 4 cut(s) 329, 710, 1095, 1220
NspI RCATGY 2 cut(s) 1889, 2444
NspV TTCGAA 1 cut(s) 551
PagI TCATGA 1 cut(s) 1684
PceI AGGCCT 1 cut(s) 2371
PcsI WCGNNNNNNNCGW 2 cut(s) 801, 815
PdmI GAANNNNTTC 3 cut(s) 2538, 2583, 2639
PfeI GAWTC 6 cut(s) 440, 455, 842, 1307, 1944, 2584
PfoI TCCNGGA 2 cut(s) 2117, 2985
PinAI ACCGGT 2 cut(s) 565, 1656
PkrI GCNGC 5 cut(s) 214, 1413, 2619, 2890, 2908
PleI GAGTC 4 cut(s) 410, 926, 1682, 1812
PluTI GGCGCC 1 cut(s) 116
PpsI GAGTC 4 cut(s) 410, 926, 1682, 1812
PpuMI RGGWCCY 2 cut(s) 956, 2065
PshAI GACNNNNGTC 1 cut(s) 1919
PshBI ATTAAT 1 cut(s) 1536
Psp1406I AACGTT 1 cut(s) 818
Psp5II RGGWCCY 2 cut(s) 956, 2065
Psp6I CCWGG 8 cut(s) 1631, 1747, 1891, 1996, 2117, 2245, 2477, 2985
PspFI CCCAGC 2 cut(s) 2801, 2902
PspGI CCWGG 8 cut(s) 1631, 1747, 1891, 1996, 2117, 2245, 2477, 2985
PspN4I GGNNCC 6 cut(s) 114, 564, 957, 2066, 2383, 2455
PspPI GGNCC 3 cut(s) 563, 956, 2065
PspPPI RGGWCCY 2 cut(s) 956, 2065
PstI CTGCAG 2 cut(s) 653, 1163
PsuI RGATCY 1 cut(s) 1493
PvuII CAGCTG 1 cut(s) 2906
RsaI GTAC 7 cut(s) 277, 479, 814, 1090, 1596, 1983, 2333
RsaNI GTAC 7 cut(s) 276, 478, 813, 1089, 1595, 1982, 2332
RseI CAYNNNNRTG 3 cut(s) 1716, 1722, 1779
SatI GCNGC 5 cut(s) 213, 1412, 2618, 2889, 2907
Sau3AI GATC 5 cut(s) 1129, 1493, 1625, 2364, 2647
Sau96I GGNCC 3 cut(s) 563, 956, 2065
SchI GAGTC 4 cut(s) 410, 926, 1682, 1813
ScrFI CCNGG 8 cut(s) 1633, 1749, 1893, 1998, 2119, 2247, 2479, 2987
SfaNI GCATC 7 cut(s) 313, 528, 583, 976, 2145, 2512, 2854
SfcI CTRYAG 6 cut(s) 21, 309, 649, 846, 1159, 1519
SfoI GGCGCC 1 cut(s) 114
SfuI TTCGAA 1 cut(s) 551
SinI GGWCC 3 cut(s) 563, 956, 2065
SmiMI CAYNNNNRTG 3 cut(s) 1716, 1722, 1779
SmlI CTYRAG 1 cut(s) 2957
SmoI CTYRAG 1 cut(s) 2957
SseBI AGGCCT 1 cut(s) 2371
SspDI GGCGCC 1 cut(s) 112
SspI AATATT 1 cut(s) 2230
SspMI CTAG 4 cut(s) 27, 1457, 2210, 2421
StuI AGGCCT 1 cut(s) 2371
StyD4I CCNGG 8 cut(s) 1631, 1747, 1891, 1996, 2117, 2245, 2477, 2985
StyI CCWWGG 2 cut(s) 2140, 2664
TaaI ACNGT 8 cut(s) 335, 425, 464, 872, 1101, 1369, 2514, 2828
TaiI ACGT 3 cut(s) 821, 1565, 1912
TaqI TCGA 4 cut(s) 443, 551, 804, 1310
TatI WGTACW 4 cut(s) 275, 477, 812, 2331
TauI GCSGC 2 cut(s) 215, 1414
TfiI GAWTC 6 cut(s) 440, 455, 842, 1307, 1944, 2584
TscAI CASTG 8 cut(s) 124, 340, 469, 653, 877, 946, 1163, 2392
TseFI GTSAC 4 cut(s) 329, 710, 1095, 1220
TseI GCWGC 3 cut(s) 2617, 2888, 2906
Tsp45I GTSAC 4 cut(s) 329, 710, 1095, 1220
TspGWI ACGGA 2 cut(s) 1377, 2897
TspRI CASTG 8 cut(s) 124, 340, 469, 653, 877, 946, 1163, 2392
VpaK11BI GGWCC 3 cut(s) 563, 956, 2065
VspI ATTAAT 1 cut(s) 1536
XagI CCTNNNNNAGG 3 cut(s) 1338, 1896, 2376
XapI RAATTY 3 cut(s) 1192, 1793, 1821
XceI RCATGY 2 cut(s) 1889, 2444
XmiI GTMKAC 1 cut(s) 1103
XmnI GAANNNNTTC 3 cut(s) 2538, 2583, 2639
XspI CTAG 4 cut(s) 27, 1457, 2210, 2421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.