Prupe.5G052400_v2.0.a1

SNF2 domain-containing protein CLASSY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0001072
Physical Location & Seq
Forward (+)
5661093 .. 5668906
7814 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G052400.1

Sequence Viewer

Length: 3780 bp
ATGGACTATAACGCGCCTGTAGCAAGGAGGACACGGCTAAGTGAGGAGAAATACTGGAGGAAGATATGGGAGAAACAGGGTGGGAAACGAAAACTCCGTGATGGGTCTGATAAAAAAGAGAAATCACGTAAGGGGTCCAAGGAATGGGATTGTGTCTCTCTGGATGACTCTGAGGAGAATGAGGAAGCCAGTGTGAGTCCTTCTGTGGGAGGCAAGGACAAGAAGAAGAGTGGGAAAAGAAAACTCCATGATGGGCCCAATATGAAAGAGAAATCACGCAAGGGATCCAAGGAATGGGACTGTATTTATGTTGATGACTCTGAGGAGAATGAGGAAGTCAGTGTGAGTCCATCCACAAAAGGCAAGAACAAGAAGAAGGGTGGGAAAAGAAAATCTGCTGAGGGGTCTAAGAAACAGAGGTCCGGTTATGATGATTCTGATGACAGTGTAGCGGCCAGTGTGGAGATCCTCAGTGAAAGTTCATTTGGAAAGCAAGACAATGATTCTGTGGGTTTTGATCATGTTGAGAGTGCCGGATCAAATGGAAAGAATTCTAAATCTGGTGCTGTGGACATTGAGAATTTGTGTCCAGTTGACGTGGAGGATAGTGATGGTGAGGTGGTGTATTTGGGTGAAGAGAAAGTAGGAGGTTTTGGTTGTTCGAGTACAGAGAGGAGTGATGCCAGTGAGGATACTGCTTCTGATGGCTCAGATGAATCTTGGAAGAGTAGTTCTAGTGAGGATGCTATTTCTGATGCCTCAGATGAATCAGAAGATGAGTCTTTTGAACAAGAAAAGTCAGAAAGTTCTGTATTTTCTGAGGAGTCGAATTCATGCAGTGGAGAGGGGCATGATGATGAAAGAGAGGTTATCAAGACAAGTGGGAAACCAAGAAAGGGGACAAGTGTTGAGGGTGATGTTGAGGTGAAGAAGGGGAAGGACATTGATGCTAGTGAGATTACAAAAGGAAGTGGGAAAGCGGGAAAGGGAAGAAGTGTTGAGGTTGGTGTGAGGAGAAAGAGAAGGGTTGGGTTGGATATGTCAGTTGATGCAGATGATGACATTGATAGCAACAAAGATGATCCTATTCATTCCGCACAAGAGTTTAATAGTGTGGCAAAACGAAATCGTTCACGAGTTAGTGGAAGAAGTGAAAAGAAGAGAATGGTAAATCAACGACTTTGTGTTGATGAGGATAATGAGGATTCTTCTTCCGGGCATGATAATGACAATGAGGATGTTGATGACGCCAATTGCAGTGGTCCAAGAACTAGGTGCCACAAAAAGAAAACAGGGACTGATGATGATGATAGAAGAAATTATGAAAGTGACAAGACCTATGGTGGTCCTAGTAAATGGAACGGTGTCCACGGAGTGTGCAAGAAGAATAAAAGGGATATCGAGAATCTGACTAACAGAATGTCCATGCGGGCAAAGAAGGACTGTAATGCTTTTAAGATTCTTGTAGATTCCATTTATGAGAAGGGAGAAGGGACACTGGAAGGGTCAGTTTCCTTTGGAGATGAAGGCCCTAAAGATGAAAGAAATCCACCAGAATCTGAGATGACAACTCTTCCACTTAAGTTTACTTTTCCATGGGAGCAGTCAAATGTACCAAAGAAGTCAGAGTGTGATCCAGAAGAAAAAGAACTATGGGACGATCTTGAATTTGCTCTCAGAGCTTCTGAGATTGAGTCCCCTGATTCTAATGTGGTTGAAAATCAAGATTCACTCCCTATTGCTAACGAAGTTGAAACAGTAGCTAGCCTCTGTAGGAGAGGGGTTCATCAGCTTATACTTGATGAAGAGATTGGACTCCTATGCAAGTTTTGCTCTTATATAGATCAGGAGATCAAGTATATTTTACCAGACTTTCTTGACTGCCCTTATGGAAGATTTGACAAAAGAGGCTCCGAAACAGACAACCGGTCTATCTTTGATGAGCTTCAATCCCATGTTTCTGATTCTGATCGCCATTCTGGCTGTAATTCTCATCCTCACGTTGAAGGCACAGTGTGGGACTTAATTCCTGGTGTTAAAAGTAGTATGTATCCCCATCAGCGTGAAGGTTTTGAGTTTATCTGGAACCATATAGCGGGTGGTATTCATCTTGACAAGTTGAAAAAGCCAAGTAGTGTTGGTGGGAATGGATGCATCATATCACATGCTCCTGGAACAGGAAAAACTCGCCTGACCATTGTCTTTCTCCAGACATACATGGAGTTATTCCCAGATTGCAGGCCGCTTCTGATTGCTCCTCGTAGCATGCTCCTTACGTGGGAAGAGGAGTTTAAAAAATGGAAGTTTGACATTACGTTTCACAATCTTAACAACTTGGAGTTATCTGGCGAAGAAAATCAAACAGCTGTAAATTTGGTGATGCAAGCTCAAGGCAGGAGAAGTGTTAATAAAGAGAACAGGCGAATGCTGAAGTTGTATTCCTGGAAAAAGAACAGAAGCATCCTGGGGATTACTTACCGGCTGTTTGAGCAGCTTTCTGGAGCACAAAAAACTGGCTCAGTTGACGAAATGGGGAAAATCCTTCTTGAGTTTCCTGGTCTTGTAGTGTTTGATGAAGGACACACTCCTCGGAATGATCAAAGTCATATGTGGAAGGCTTTGTCAGAAATCAAAACAAAAAGCCGTATTCTGCTCTCTGGAACTCCGTTTCAGAATAACTTTCAGGAGCTATTCAATACAATCTGCATTGTGAGGCCCACTTTTGCAGCCTCGATTGATTCTACTAAATTCAATAAGGATCTTCCCAAAAAACGAGGCCGGAAAAGCAATGGGGAAAAATCGAAATGGACTTTTGTGGCTAGTAGTAGTGGAAAAGTTGCTGATGACAAAGAAAAACATGCTACAGAAGTCAAAGCTCGGATTGCACCATTTGTCCATGTCTATAAAGGTTCTGTGCTACAAGATAGTCTTCCCGGGTTAAGGAACTCAATAGTTGTTTTACACCCAACCCCGCTACAGGTGAAGTTTCATAAGAGAATTCAAGGGGTGAAGGAACTATTTCGATATGAAAACCTAGAGGCTTTAATATGTATTCATCCTTCCCTCTTGCTTAAGGATAAGGAAGATGCATTTTCTGCCGACCGGGGTAGGTTAGAGGAGCTTAAATTAAATCCCGATGCTGGAGTCAAGGCAAAATTTGTGATGGAACTCATTCGGCTCAGCGATGCTATGAAGGAAAGAGTTCTGGTTTTCAGTCAATACCTTGATCCGTTAATCCTTATAAGGGATCTTCTGAAATCTCTATTTCAGTGGACTGAAGGGGAAGAGGTGCTGTATATGGATGGGAAATGTGATATGAAGCAGCGTCAATCCTCGATGAAGGTTTTCAATGATCCATCTAGCAATGCCAAGGTATTACTAGCTTCAACTAAAGCATGTTCCGAAGGCATAAGCCTTGTTGGAGCTTCCAGGGTTGTATTGCTTGATGTCGCATGGAATCCATCTGTGGAGAGGCAAGCAATATCCCGTGCCTACAGGCTGGGACAGAAGAAGGTTGTGTTTGTCTACCATCTCCTCATGGACGGAGCTAACGAAGAGGATAAATACAGTCGCCAAGTTGACAAGAGTCGTTTATCTGAGTTGGTGTTTTCTGATTCAGACAAGAAGGCTCTCGAGAAGGAAATCCGAGCCACAGTTTCAGAGGATAAAATCTTGGAAGAGATGGCTCAGCACGAGAAACTGAAGCACATATTTAAAAGCATAGCTTTACTGCATGAAGACATATACTTTGAGCAGCTAGGCCAGTCAACTTTTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

1260

Amino Acids

141.4

Weight (kDa)

5.73

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3242
AccB1I GGYRCC 1 cut(s) 1275
AccB7I CCANNNNNTGG 2 cut(s) 144, 294
AccI GTMKAC 1 cut(s) 3525
AccII CGCG 1 cut(s) 14
AciI CCGC 7 cut(s) 452, 980, 1095, 1429, 2096, 2243, 2972
AcoI YGGCCR 1 cut(s) 453
AcsI RAATTY 8 cut(s) 550, 580, 829, 1667, 2371, 2747, 2997, 3155
AcuI CTGAAG 3 cut(s) 2450, 3297, 3722
AcyI GRCGYC 1 cut(s) 1248
AdeI CACNNNGTG 2 cut(s) 1375, 2016
AfaI GTAC 2 cut(s) 667, 1614
AflII CTTAAG 2 cut(s) 1580, 3071
AgeI ACCGGT 1 cut(s) 1926
AhdI GACNNNNNGTC 1 cut(s) 1927
AjiI CACGTC 1 cut(s) 598
AjnI CCWGG 6 cut(s) 2029, 2170, 2441, 2463, 2554, 3428
AjuI GAANNNNNNNTTGG 2 cut(s) 468, 500
AloI GAACNNNNNNTCC 2 cut(s) 715, 747
Alw21I GWGCWC 1 cut(s) 2506
Alw26I GTCTC 1 cut(s) 160
AlwNI CAGNNNCTG 2 cut(s) 1298, 1559
Ama87I CYCGRG 2 cut(s) 2933, 3632
AoxI GGCC 7 cut(s) 254, 453, 1528, 2240, 2714, 2776, 3760
ApaI GGGCCC 1 cut(s) 258
ApeKI GCWGC 4 cut(s) 2491, 2726, 3322, 3754
ApoI RAATTY 8 cut(s) 550, 580, 829, 1667, 2371, 2747, 2997, 3155
ArsI GACNNNNNNTTYG 2 cut(s) 3731, 3763
AsiGI ACCGGT 1 cut(s) 1926
Asp700I GAANNNNTTC 6 cut(s) 550, 1129, 3018, 3171, 3201, 3344
AspLEI GCGC 1 cut(s) 16
AspS9I GGNCC 8 cut(s) 135, 254, 255, 420, 1262, 1346, 1529, 2715
AsuC2I CCSGG 4 cut(s) 1216, 2934, 2935, 3104
AsuHPI GGTGA 7 cut(s) 626, 644, 926, 937, 2389, 2992, 3019
AsuNHI GCTAGC 1 cut(s) 1763
AvaI CYCGRG 2 cut(s) 2933, 3632
AvaII GGWCC 4 cut(s) 135, 420, 1262, 1346
BaeGI GKGCMC 1 cut(s) 258
BamHI GGATCC 1 cut(s) 284
BanI GGYRCC 1 cut(s) 1275
BanII GRGCYC 1 cut(s) 258
BarI GAAGNNNNNNTAC 2 cut(s) 3043, 3075
BauI CACGAG 2 cut(s) 1134, 3692
BbsI GAAGAC 2 cut(s) 2921, 3744
Bbv12I GWGCWC 1 cut(s) 2506
BbvCI CCTCAGC 1 cut(s) 399
BbvI GCAGC 4 cut(s) 2503, 2738, 3334, 3766
BceAI ACGGC 2 cut(s) 50, 2628
BciT130I CCWGG 6 cut(s) 2031, 2172, 2443, 2465, 2556, 3430
BciVI GTATCC 2 cut(s) 685, 2061
BclI TGATCA 2 cut(s) 517, 2596
BcnI CCSGG 4 cut(s) 1216, 2934, 2935, 3104
BcoDI GTCTC 1 cut(s) 160
BfmI CTRYAG 5 cut(s) 18, 1771, 2862, 2975, 3493
BfrI CTTAAG 2 cut(s) 1580, 3071
BfuI GTATCC 2 cut(s) 685, 2061
BglI GCCNNNNNGGC 1 cut(s) 1980
BisI GCNGC 6 cut(s) 453, 2243, 2492, 2727, 3323, 3755
BlpI GCTNAGC 2 cut(s) 3179, 3687
BlsI GCNGC 6 cut(s) 454, 2244, 2493, 2728, 3324, 3756
Bme18I GGWCC 4 cut(s) 135, 420, 1262, 1346
BmeRI GACNNNNNGTC 1 cut(s) 1927
BmeT110I CYCGRG 2 cut(s) 2933, 3632
BmgBI CACGTC 1 cut(s) 598
BmgT120I GGNCC 8 cut(s) 135, 254, 255, 420, 1262, 1346, 1529, 2715
BmiI GGNNCC 6 cut(s) 136, 256, 286, 1277, 1912, 2087
BmtI GCTAGC 1 cut(s) 1767
BoxI GACNNNNGTC 2 cut(s) 2198, 3585
BpiI GAAGAC 2 cut(s) 2921, 3744
BpmI CTGGAG 4 cut(s) 76, 2192, 2520, 3162
Bpu10I CCTNAGC 1 cut(s) 399
Bpu1102I GCTNAGC 2 cut(s) 3179, 3687
BpuEI CTTGAG 2 cut(s) 2373, 2567
BpuMI CCSGG 4 cut(s) 1216, 2934, 2935, 3104
BsaAI YACGTR 2 cut(s) 128, 2277
BsaBI GATNNNNATC 1 cut(s) 1968
BsaHI GRCGYC 1 cut(s) 1248
BsaWI WCCGGW 2 cut(s) 422, 1926
BsaXI ACNNNNNCTCC 4 cut(s) 78, 108, 1841, 1871
Bse118I RCCGGY 2 cut(s) 1926, 2478
Bse1I ACTGG 8 cut(s) 59, 189, 456, 590, 684, 1503, 2518, 3763
Bse3DI GCAATG 2 cut(s) 2794, 3370
Bse8I GATNNNNATC 1 cut(s) 1968
BseBI CCWGG 6 cut(s) 2031, 2172, 2443, 2465, 2556, 3430
BseGI GGATG 9 cut(s) 169, 350, 748, 1243, 1993, 2156, 2460, 3055, 3307
BseJI GATNNNNATC 1 cut(s) 1968
BseMI GCAATG 2 cut(s) 2794, 3370
BseNI ACTGG 8 cut(s) 59, 189, 456, 590, 684, 1503, 2518, 3763
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 4 cut(s) 2503, 2738, 3334, 3766
BseYI CCCAGC 1 cut(s) 3499
Bsh1236I CGCG 1 cut(s) 14
Bsh1285I CGRYCG 1 cut(s) 3103
BshFI GGCC 7 cut(s) 256, 455, 1530, 2242, 2716, 2778, 3762
BshNI GGYRCC 1 cut(s) 1275
BshTI ACCGGT 1 cut(s) 1926
BsiEI CGRYCG 1 cut(s) 3103
BsiHKAI GWGCWC 1 cut(s) 2506
BsiHKCI CYCGRG 2 cut(s) 2933, 3632
BsiSI CCGG 8 cut(s) 423, 534, 1215, 1927, 2479, 2779, 2934, 3103
BslFI GGGAC 8 cut(s) 311, 913, 1309, 1507, 1670, 1681, 2033, 3516
BsmAI GTCTC 1 cut(s) 160
BsmFI GGGAC 8 cut(s) 311, 913, 1309, 1507, 1670, 1681, 2033, 3516
BsmI GAATGC 1 cut(s) 2430
BsnI GGCC 7 cut(s) 256, 455, 1530, 2242, 2716, 2778, 3762
BsoBI CYCGRG 2 cut(s) 2933, 3632
Bsp120I GGGCCC 1 cut(s) 254
Bsp1286I GDGCHC 2 cut(s) 258, 2506
Bsp1720I GCTNAGC 2 cut(s) 3179, 3687
Bsp19I CCATGG 1 cut(s) 1595
BspACI CCGC 7 cut(s) 452, 980, 1095, 1429, 2096, 2243, 2972
BspANI GGCC 7 cut(s) 256, 455, 1530, 2242, 2716, 2778, 3762
BspFNI CGCG 1 cut(s) 14
BspLI GGNNCC 6 cut(s) 136, 256, 286, 1277, 1912, 2087
BspOI GCTAGC 1 cut(s) 1767
BspT107I GGYRCC 1 cut(s) 1275
BspTI CTTAAG 2 cut(s) 1580, 3071
BsrDI GCAATG 2 cut(s) 2794, 3370
BsrFI RCCGGY 2 cut(s) 1926, 2478
BsrI ACTGG 8 cut(s) 59, 189, 456, 590, 684, 1503, 2518, 3763
BssAI RCCGGY 2 cut(s) 1926, 2478
BssNI GRCGYC 1 cut(s) 1248
BssSI CACGAG 2 cut(s) 1134, 3692
BssT1I CCWWGG 4 cut(s) 138, 288, 1595, 3369
Bst2BI CACGAG 2 cut(s) 1134, 3692
Bst2UI CCWGG 6 cut(s) 2031, 2172, 2443, 2465, 2556, 3430
Bst4CI ACNGT 8 cut(s) 302, 446, 1364, 1445, 1759, 2014, 3569, 3655
BstACI GRCGYC 1 cut(s) 1248
BstAFI CTTAAG 2 cut(s) 1580, 3071
BstAPI GCANNNNNTGC 2 cut(s) 1830, 3095
BstBAI YACGTR 2 cut(s) 128, 2277
BstC8I GCNNGC 6 cut(s) 1431, 1765, 2240, 2267, 2385, 3477
BstDSI CCRYGG 2 cut(s) 1369, 1595
BstENI CCTNNNNNAGG 1 cut(s) 2175
BstF5I GGATG 9 cut(s) 169, 350, 748, 1243, 1993, 2156, 2460, 3055, 3307
BstFNI CGCG 1 cut(s) 14
BstHHI GCGC 1 cut(s) 16
BstMAI GTCTC 1 cut(s) 160
BstMCI CGRYCG 1 cut(s) 3103
BstMWI GCNNNNNNNGC 8 cut(s) 20, 1679, 1830, 1980, 2488, 2784, 2882, 3095
BstNI CCWGG 6 cut(s) 2031, 2172, 2443, 2465, 2556, 3430
BstNSI RCATGY 4 cut(s) 2168, 2269, 2861, 3399
BstPAI GACNNNNGTC 2 cut(s) 2198, 3585
BstSFI CTRYAG 5 cut(s) 18, 1771, 2862, 2975, 3493
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 1 cut(s) 14
BstV1I GCAGC 4 cut(s) 2503, 2738, 3334, 3766
BstV2I GAAGAC 2 cut(s) 2921, 3744
BstX2I RGATCY 4 cut(s) 284, 465, 2758, 3247
BstYI RGATCY 4 cut(s) 284, 465, 2758, 3247
BsuI GTATCC 2 cut(s) 685, 2061
BsuRI GGCC 7 cut(s) 256, 455, 1530, 2242, 2716, 2778, 3762
BtgI CCRYGG 2 cut(s) 1369, 1595
BtgZI GCGATG 1 cut(s) 3198
BtrI CACGTC 1 cut(s) 598
BtsCI GGATG 9 cut(s) 169, 350, 748, 1243, 1993, 2156, 2460, 3055, 3307
BtsI GCAGTG 2 cut(s) 844, 1264
Cac8I GCNNGC 6 cut(s) 1431, 1765, 2240, 2267, 2385, 3477
CaiI CAGNNNCTG 2 cut(s) 1298, 1559
CfoI GCGC 1 cut(s) 16
Cfr10I RCCGGY 2 cut(s) 1926, 2478
Cfr13I GGNCC 8 cut(s) 135, 254, 255, 420, 1262, 1346, 1529, 2715
Cfr9I CCCGGG 1 cut(s) 2933
CseI GACGC 2 cut(s) 1256, 3314
Csp6I GTAC 2 cut(s) 666, 1613
CspAI ACCGGT 1 cut(s) 1926
CspCI CAANNNNNGTGG 4 cut(s) 862, 897, 1240, 1275
CviQI GTAC 2 cut(s) 666, 1613
DraI TTTAAA 2 cut(s) 2293, 3715
DraIII CACNNNGTG 2 cut(s) 1375, 2016
DriI GACNNNNNGTC 1 cut(s) 1927
EaeI YGGCCR 1 cut(s) 453
Eam1105I GACNNNNNGTC 1 cut(s) 1927
Eco130I CCWWGG 4 cut(s) 138, 288, 1595, 3369
Eco24I GRGCYC 1 cut(s) 258
Eco32I GATATC 1 cut(s) 1399
Eco47I GGWCC 4 cut(s) 135, 420, 1262, 1346
Eco57I CTGAAG 3 cut(s) 2450, 3297, 3722
Eco88I CYCGRG 2 cut(s) 2933, 3632
EcoNI CCTNNNNNAGG 1 cut(s) 2175
EcoO109I RGGNCCY 1 cut(s) 1529
EcoRI GAATTC 3 cut(s) 550, 829, 2997
EcoRII CCWGG 6 cut(s) 2029, 2170, 2441, 2463, 2554, 3428
EcoRV GATATC 1 cut(s) 1399
EcoT14I CCWWGG 4 cut(s) 138, 288, 1595, 3369
EcoT22I ATGCAT 2 cut(s) 2156, 3091
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 4 cut(s) 138, 288, 1595, 3369
FalI AAGNNNNNCTT 4 cut(s) 2913, 2945, 3709, 3741
FaqI GGGAC 8 cut(s) 311, 913, 1309, 1507, 1670, 1681, 2033, 3516
FauI CCCGC 4 cut(s) 973, 1422, 2089, 2979
FauNDI CATATG 1 cut(s) 2607
FbaI TGATCA 2 cut(s) 517, 2596
FblI GTMKAC 1 cut(s) 3525
Fnu4HI GCNGC 6 cut(s) 453, 2243, 2492, 2727, 3323, 3755
FokI GGATG 9 cut(s) 176, 337, 755, 1250, 1980, 2163, 2447, 3042, 3314
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 6 cut(s) 453, 2243, 2492, 2727, 3323, 3755
GlaI GCGC 1 cut(s) 15
GluI GCNGC 6 cut(s) 453, 2243, 2492, 2727, 3323, 3755
GsaI CCCAGC 1 cut(s) 3503
GsuI CTGGAG 4 cut(s) 76, 2192, 2520, 3162
HaeIII GGCC 7 cut(s) 256, 455, 1530, 2242, 2716, 2778, 3762
HapII CCGG 8 cut(s) 423, 534, 1215, 1927, 2479, 2779, 2934, 3103
HgaI GACGC 2 cut(s) 1256, 3314
HhaI GCGC 1 cut(s) 16
Hin1I GRCGYC 1 cut(s) 1248
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HincII GTYRAC 4 cut(s) 595, 2524, 3580, 3768
HindII GTYRAC 4 cut(s) 595, 2524, 3580, 3768
HpaII CCGG 8 cut(s) 423, 534, 1215, 1927, 2479, 2779, 2934, 3103
HphI GGTGA 7 cut(s) 626, 644, 926, 937, 2389, 2992, 3019
HpyCH4III ACNGT 8 cut(s) 302, 446, 1364, 1445, 1759, 2014, 3569, 3655
HpyCH4IV ACGT 5 cut(s) 127, 597, 2001, 2276, 2315
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 1679, 1830, 1980, 2488, 2784, 2882, 3095
HpySE526I ACGT 5 cut(s) 127, 597, 2001, 2276, 2315
Hsp92I GRCGYC 1 cut(s) 1248
HspAI GCGC 1 cut(s) 14
Ksp22I TGATCA 2 cut(s) 517, 2596
Lsp1109I GCAGC 4 cut(s) 2503, 2738, 3334, 3766
MaeII ACGT 5 cut(s) 127, 597, 2001, 2276, 2315
MaeIII GTNAC 1 cut(s) 1328
MfeI CAATTG 1 cut(s) 1252
MflI RGATCY 4 cut(s) 284, 465, 2758, 3247
MhlI GDGCHC 2 cut(s) 258, 2506
MmeI TCCRAC 2 cut(s) 1014, 3400
Mph1103I ATGCAT 2 cut(s) 2156, 3091
MroXI GAANNNNTTC 6 cut(s) 550, 1129, 3018, 3171, 3201, 3344
MslI CAYNNNNRTG 3 cut(s) 855, 1224, 2061
MspA1I CMGCKG 1 cut(s) 2366
MspCI CTTAAG 2 cut(s) 1580, 3071
MspI CCGG 8 cut(s) 423, 534, 1215, 1927, 2479, 2779, 2934, 3103
MunI CAATTG 1 cut(s) 1252
Mva1269I GAATGC 1 cut(s) 2430
MvaI CCWGG 6 cut(s) 2031, 2172, 2443, 2465, 2556, 3430
MvnI CGCG 1 cut(s) 14
MwoI GCNNNNNNNGC 8 cut(s) 20, 1679, 1830, 1980, 2488, 2784, 2882, 3095
NciI CCSGG 4 cut(s) 1216, 2934, 2935, 3104
NcoI CCATGG 1 cut(s) 1595
NdeI CATATG 1 cut(s) 2607
NheI GCTAGC 1 cut(s) 1763
NlaIV GGNNCC 6 cut(s) 136, 256, 286, 1277, 1912, 2087
NmuCI GTSAC 1 cut(s) 1328
NsiI ATGCAT 2 cut(s) 2156, 3091
NspI RCATGY 4 cut(s) 2168, 2269, 2861, 3399
PaeI GCATGC 1 cut(s) 2269
PaeR7I CTCGAG 1 cut(s) 3632
PcsI WCGNNNNNNNCGW 2 cut(s) 94, 3549
PctI GAATGC 1 cut(s) 2430
PdmI GAANNNNTTC 6 cut(s) 550, 1129, 3018, 3171, 3201, 3344
PflMI CCANNNNNTGG 2 cut(s) 144, 294
PfoI TCCNGGA 2 cut(s) 2170, 2441
PinAI ACCGGT 1 cut(s) 1926
PkrI GCNGC 6 cut(s) 454, 2244, 2493, 2728, 3324, 3756
Ppu21I YACGTR 2 cut(s) 128, 2277
PshAI GACNNNNGTC 2 cut(s) 2198, 3585
PsiI TTATAA 1 cut(s) 3242
Psp6I CCWGG 6 cut(s) 2029, 2170, 2441, 2463, 2554, 3428
PspFI CCCAGC 1 cut(s) 3499
PspGI CCWGG 6 cut(s) 2029, 2170, 2441, 2463, 2554, 3428
PspN4I GGNNCC 6 cut(s) 136, 256, 286, 1277, 1912, 2087
PspOMI GGGCCC 1 cut(s) 254
PspPI GGNCC 8 cut(s) 135, 254, 255, 420, 1262, 1346, 1529, 2715
PstNI CAGNNNCTG 2 cut(s) 1298, 1559
PsuI RGATCY 4 cut(s) 284, 465, 2758, 3247
PvuII CAGCTG 1 cut(s) 2366
RsaI GTAC 2 cut(s) 667, 1614
RsaNI GTAC 2 cut(s) 666, 1613
RseI CAYNNNNRTG 3 cut(s) 855, 1224, 2061
SatI GCNGC 6 cut(s) 453, 2243, 2492, 2727, 3323, 3755
Sau96I GGNCC 8 cut(s) 135, 254, 255, 420, 1262, 1346, 1529, 2715
SduI GDGCHC 2 cut(s) 258, 2506
SfcI CTRYAG 5 cut(s) 18, 1771, 2862, 2975, 3493
Sfr274I CTCGAG 1 cut(s) 3632
SinI GGWCC 4 cut(s) 135, 420, 1262, 1346
SlaI CTCGAG 1 cut(s) 3632
SmaI CCCGGG 1 cut(s) 2935
SmiMI CAYNNNNRTG 3 cut(s) 855, 1224, 2061
SmlI CTYRAG 5 cut(s) 1580, 2388, 2546, 3071, 3632
SmoI CTYRAG 5 cut(s) 1580, 2388, 2546, 3071, 3632
SphI GCATGC 1 cut(s) 2269
SsiI CCGC 7 cut(s) 452, 980, 1095, 1429, 2096, 2243, 2972
StyI CCWWGG 4 cut(s) 138, 288, 1595, 3369
TaaI ACNGT 8 cut(s) 302, 446, 1364, 1445, 1759, 2014, 3569, 3655
TaiI ACGT 5 cut(s) 130, 600, 2004, 2279, 2318
TaqI TCGA 8 cut(s) 662, 827, 1401, 2732, 2801, 3022, 3335, 3633
TatI WGTACW 1 cut(s) 665
TauI GCSGC 2 cut(s) 455, 2245
TseFI GTSAC 1 cut(s) 1328
TseI GCWGC 4 cut(s) 2491, 2726, 3322, 3754
Tsp45I GTSAC 1 cut(s) 1328
TspGWI ACGGA 5 cut(s) 86, 1386, 2655, 3219, 3558
TspMI CCCGGG 1 cut(s) 2933
Van91I CCANNNNNTGG 2 cut(s) 144, 294
Vha464I CTTAAG 2 cut(s) 1580, 3071
VpaK11BI GGWCC 4 cut(s) 135, 420, 1262, 1346
XagI CCTNNNNNAGG 1 cut(s) 2175
XapI RAATTY 8 cut(s) 550, 580, 829, 1667, 2371, 2747, 2997, 3155
XceI RCATGY 4 cut(s) 2168, 2269, 2861, 3399
XcmI CCANNNNNNNNNTGG 2 cut(s) 2096, 3770
XhoI CTCGAG 1 cut(s) 3632
XmaI CCCGGG 1 cut(s) 2933
XmiI GTMKAC 1 cut(s) 3525
XmnI GAANNNNTTC 6 cut(s) 550, 1129, 3018, 3171, 3201, 3344
Zsp2I ATGCAT 2 cut(s) 2156, 3091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.