Rorug02G0417400

SNF2 domain-containing protein CLASSY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001072
Physical Location & Seq
Reverse (-)
53686693 .. 53694605
7913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0417400.1

Sequence Viewer

Length: 1638 bp
ATGGCGACGATGCCGAGCCACGGCCTGAGGCACGTGACCACGGTTCGCCCGTGGCTGCGGAATTTCCGAAGCGCGAAGACGCTGGCGGCTCTGCCGTCTTCGCCTTCGACTGAAGATTCGGAGCGGGCCGAGTCCAATGAGAATCCCAAGCCCAAGCCCAAGGCCAGCTCGTATTTCCCGAAGCGAGGGCAGAGTTTGGAGCTGGTCTGTGAGTCTTTGGCTTTCAAAGGGAAGGGTCTGTGTAAGGTTTCGGAGACCGGGTTCGTTGTCATGTGCGACCGGGCTTTGCCTGGGGAGCGGTTCATTGGGCGCGTGACTCGCAAGAAAGGGACCTATGCTGAGGTGACAAAGGTACAGACACTATCTCCTCATTGGGATTTCGTGGATGCTCCTTGTGAGTATGCATCTTACTGTGGAGGATGTAAAACACAAAATTTGTCCTATGAGGCACAAATCAGAGCTAAGGAACACCAAGTTCGTGAGTTGATAATAAATTTTGGAAAGGTTTCTCCTACAGAGCTGGAAAGCATCATGAAGCCCATTGTTCCCTGTGACATCCAGTTCCGTTACAGGAATAAGATGGAGTTCTCATTTGGTTCTCAAAAATGGTTACCTAAAGAATCATTACACGAGAGACAAGATGGAATTGAGAATTATGCCTTGGGTCTGCATGCTCCTGGCTTTTTTGATAAGGTTCTAAATGTTGACAAGTGCTTATTGCAAAGTGAGCCTGCCGACATGGTTCTTGCCGCCGTGCAACAAAGTTGGAGAGATCCACAATTAGGTCTCTCTCCTTATGATGTTTACTCTCATGCCGGATTTCTTAAGCATCTAATGCTAAGAACTGGAAGGAATGTGAAGACCGGTCTTCCTGAACTTATGGTTAATTTTGTGACCTCATCTTACAACCCAGAGCTACTTAAGCCTCTTCTTCAAAGGATAACAGCTATCCCCGAAGTGGTAAGCGTCATGAACAATGTAAATACGTCTGTTGGTAACACGTCTCTTGGGGAGGTCGAGTACACTTTGTATGGAAAGTCTAGCATAACAGAGACCTTACGAGGGCTCACCTTTCAAATATCAGCAAACTCATTCTTCCAAACAAATACTCACCAGGCAGAGATTTTATATAAACTCATAGAAGATTGTGCTGGTCTCAGAGGAGAGGGCTCAGAGATTGTTCTTGACCTGTTTTGTGGGACTGGCACCATTGGTCTGACACTTGCCAGAAGGGCCAAACATGTTTATGGCTATGAAATAATTCCTCAGGCCATTGCAGATGCTTGTCTGAATGCTGAGCTGAATGGTATCCGTAACGCTACATTTGTCCAAGGGGATCTTAACAAAATTGATGAGAGTTTTGGGAACAATTTTCCTAAGCCTGACATCGTTATTTCAGATCCCAATCGTCCAGGAATGCACATGAAGTTGATTAAGTTTCTTCTAAAGCTGAAGGCTTCACGCATTGTTTATGTATCATGTAACCCTGCCACATGTGCACGTGACCTTGATTATCTCTGCAATGGTGTGGTAGAGAAAAACATAAAAGGCTGTTACAAGCTAAAGAGTGTGCAACCAGTAGACATGTTTCCGCACACTCCTCATATTGAGTGTGTTTGCCTCTTGGAGCTTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

545

Amino Acids

60.81

Weight (kDa)

8.41

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA_U5-meth_tr PF05958 354 - 543 1.3e-15 tRNA (Uracil-5-)-methyltransferase
Methyltransf_15 PF09445 392 - 470 8e-06 RNA cap guanine-N2 methyltransferase
Methyltransf_31 PF13847 393 - 467 1.7e-12 Methyltransferase domain
Methyltransf_25 PF13649 394 - 452 2.2e-07 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1205
AccBSI CCGCTC 2 cut(s) 124, 298
AccI GTMKAC 1 cut(s) 1581
AccII CGCG 2 cut(s) 74, 312
AciI CCGC 6 cut(s) 58, 86, 124, 298, 750, 1592
AclWI GGATC 3 cut(s) 767, 1344, 1394
AcsI RAATTY 3 cut(s) 61, 433, 493
AcuI CTGAAG 2 cut(s) 132, 1472
AcvI CACGTG 2 cut(s) 34, 1502
AfaI GTAC 2 cut(s) 354, 1022
AfiI CCNNNNNNNGG 5 cut(s) 20, 185, 782, 958, 1062
AflII CTTAAG 2 cut(s) 824, 920
AflIII ACRYGT 4 cut(s) 999, 1240, 1493, 1584
AgeI ACCGGT 1 cut(s) 863
AgsI TTSAA 3 cut(s) 226, 935, 1076
AjiI CACGTC 1 cut(s) 1002
AjnI CCWGG 4 cut(s) 289, 676, 1113, 1411
AjuI GAANNNNNNNTTGG 2 cut(s) 644, 676
AloI GAACNNNNNNTCC 2 cut(s) 245, 277
Alw21I GWGCWC 1 cut(s) 1501
Alw26I GTCTC 6 cut(s) 248, 628, 791, 1008, 1046, 1160
Alw44I GTGCAC 1 cut(s) 1497
AlwI GGATC 3 cut(s) 767, 1344, 1394
AoxI GGCC 5 cut(s) 22, 126, 162, 1233, 1269
ApaLI GTGCAC 1 cut(s) 1497
ApeKI GCWGC 1 cut(s) 55
ApoI RAATTY 3 cut(s) 61, 433, 493
ArsI GACNNNNNNTTYG 2 cut(s) 100, 132
AsiGI ACCGGT 1 cut(s) 863
Asp700I GAANNNNTTC 2 cut(s) 505, 1260
AspLEI GCGC 2 cut(s) 74, 312
AspS9I GGNCC 3 cut(s) 126, 330, 1233
AsuC2I CCSGG 2 cut(s) 259, 281
AsuHPI GGTGA 3 cut(s) 355, 1060, 1103
AvaII GGWCC 1 cut(s) 330
AxyI CCTNAGG 2 cut(s) 26, 1266
BaeGI GKGCMC 1 cut(s) 1501
BanI GGYRCC 1 cut(s) 1205
BanII GRGCYC 2 cut(s) 1068, 1172
BauI CACGAG 1 cut(s) 629
BbrPI CACGTG 2 cut(s) 34, 1502
BbsI GAAGAC 4 cut(s) 83, 90, 860, 866
Bbv12I GWGCWC 1 cut(s) 1501
BbvCI CCTCAGC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 42
BccI CCATC 2 cut(s) 574, 635
BceAI ACGGC 3 cut(s) 37, 79, 737
BciT130I CCWGG 4 cut(s) 291, 678, 1115, 1413
BciVI GTATCC 1 cut(s) 1319
BcnI CCSGG 2 cut(s) 259, 281
BcoDI GTCTC 6 cut(s) 248, 628, 791, 1008, 1046, 1160
BfaI CTAG 1 cut(s) 1041
BfmI CTRYAG 1 cut(s) 513
BfrI CTTAAG 2 cut(s) 824, 920
BfuI GTATCC 1 cut(s) 1319
BglI GCCNNNNNGGC 1 cut(s) 1232
BisI GCNGC 3 cut(s) 56, 87, 750
BlpI GCTNAGC 1 cut(s) 1296
BlsI GCNGC 3 cut(s) 57, 88, 751
Bme1390I CCNGG 6 cut(s) 259, 281, 291, 678, 1115, 1413
Bme18I GGWCC 1 cut(s) 330
BmgBI CACGTC 1 cut(s) 1002
BmgT120I GGNCC 3 cut(s) 126, 330, 1233
BmiI GGNNCC 2 cut(s) 331, 1207
BmrFI CCNGG 6 cut(s) 259, 281, 291, 678, 1115, 1413
BmsI GCATC 5 cut(s) 376, 413, 537, 838, 1270
BpiI GAAGAC 4 cut(s) 83, 90, 860, 866
Bpu10I CCTNAGC 3 cut(s) 339, 462, 1377
Bpu1102I GCTNAGC 1 cut(s) 1296
BpuMI CCSGG 2 cut(s) 259, 281
BsaAI YACGTR 2 cut(s) 34, 1502
BsaBI GATNNNNATC 1 cut(s) 1404
BsaI GGTCTC 4 cut(s) 248, 791, 1046, 1160
BsaJI CCNNGG 7 cut(s) 19, 39, 50, 159, 290, 660, 1330
BsaWI WCCGGW 1 cut(s) 863
BsaXI ACNNNNNCTCC 6 cut(s) 245, 275, 349, 379, 1004, 1034
Bsc4I CCNNNNNNNGG 5 cut(s) 20, 185, 782, 958, 1062
Bse118I RCCGGY 1 cut(s) 863
Bse1I ACTGG 4 cut(s) 559, 850, 1207, 1577
Bse21I CCTNAGG 2 cut(s) 26, 1266
Bse3DI GCAATG 2 cut(s) 1272, 1528
Bse8I GATNNNNATC 1 cut(s) 1404
BseBI CCWGG 4 cut(s) 291, 678, 1115, 1413
BseDI CCNNGG 7 cut(s) 19, 39, 50, 159, 290, 660, 1330
BseGI GGATG 3 cut(s) 391, 425, 555
BseJI GATNNNNATC 1 cut(s) 1404
BseLI CCNNNNNNNGG 5 cut(s) 20, 185, 782, 958, 1062
BseMI GCAATG 2 cut(s) 1272, 1528
BseMII CTCAG 6 cut(s) 17, 330, 1171, 1185, 1280, 1287
BseNI ACTGG 4 cut(s) 559, 850, 1207, 1577
BseRI GAGGAG 3 cut(s) 357, 1176, 1590
BseSI GKGCMC 1 cut(s) 1501
BseXI GCAGC 1 cut(s) 42
Bsh1236I CGCG 2 cut(s) 74, 312
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 5 cut(s) 24, 128, 164, 1235, 1271
BshNI GGYRCC 1 cut(s) 1205
BshTI ACCGGT 1 cut(s) 863
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 1 cut(s) 1501
BsiSI CCGG 4 cut(s) 258, 280, 816, 864
BslFI GGGAC 2 cut(s) 343, 1213
BslI CCNNNNNNNGG 5 cut(s) 20, 185, 782, 958, 1062
BsmAI GTCTC 6 cut(s) 248, 628, 791, 1008, 1046, 1160
BsmBI CGTCTC 1 cut(s) 1008
BsmFI GGGAC 2 cut(s) 343, 1213
BsmI GAATGC 2 cut(s) 1297, 1422
BsnI GGCC 5 cut(s) 24, 128, 164, 1235, 1271
Bso31I GGTCTC 4 cut(s) 248, 791, 1046, 1160
Bsp1286I GDGCHC 3 cut(s) 1068, 1172, 1501
Bsp143I GATC 3 cut(s) 772, 1336, 1399
Bsp1720I GCTNAGC 1 cut(s) 1296
BspACI CCGC 6 cut(s) 58, 86, 124, 298, 750, 1592
BspANI GGCC 5 cut(s) 24, 128, 164, 1235, 1271
BspCNI CTCAG 6 cut(s) 18, 331, 1170, 1184, 1279, 1288
BspFNI CGCG 2 cut(s) 74, 312
BspHI TCATGA 2 cut(s) 531, 969
BspLI GGNNCC 2 cut(s) 331, 1207
BspPI GGATC 3 cut(s) 767, 1344, 1394
BspT107I GGYRCC 1 cut(s) 1205
BspTI CTTAAG 2 cut(s) 824, 920
BspTNI GGTCTC 4 cut(s) 248, 791, 1046, 1160
BsrBI CCGCTC 2 cut(s) 124, 298
BsrDI GCAATG 2 cut(s) 1272, 1528
BsrFI RCCGGY 1 cut(s) 863
BsrI ACTGG 4 cut(s) 559, 850, 1207, 1577
BssAI RCCGGY 1 cut(s) 863
BssECI CCNNGG 7 cut(s) 19, 39, 50, 159, 290, 660, 1330
BssMI GATC 3 cut(s) 772, 1336, 1399
BssSI CACGAG 1 cut(s) 629
BssT1I CCWWGG 3 cut(s) 159, 660, 1330
Bst2BI CACGAG 1 cut(s) 629
Bst2UI CCWGG 4 cut(s) 291, 678, 1115, 1413
Bst4CI ACNGT 2 cut(s) 43, 413
Bst6I CTCTTC 1 cut(s) 933
BstAFI CTTAAG 2 cut(s) 824, 920
BstAPI GCANNNNNTGC 1 cut(s) 835
BstBAI YACGTR 2 cut(s) 34, 1502
BstC8I GCNNGC 5 cut(s) 84, 126, 166, 672, 732
BstDEI CTNAG 9 cut(s) 26, 339, 462, 839, 1157, 1171, 1266, 1296, 1377
BstDSI CCRYGG 3 cut(s) 19, 39, 50
BstEII GGTNACC 1 cut(s) 609
BstF5I GGATG 3 cut(s) 391, 425, 555
BstFNI CGCG 2 cut(s) 74, 312
BstHHI GCGC 2 cut(s) 74, 312
BstKTI GATC 3 cut(s) 775, 1339, 1402
BstMAI GTCTC 6 cut(s) 248, 628, 791, 1008, 1046, 1160
BstMBI GATC 3 cut(s) 772, 1336, 1399
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 8 cut(s) 100, 295, 318, 727, 835, 922, 1232, 1496
BstNI CCWGG 4 cut(s) 291, 678, 1115, 1413
BstNSI RCATGY 4 cut(s) 674, 1244, 1497, 1588
BstPI GGTNACC 1 cut(s) 609
BstSCI CCNGG 6 cut(s) 257, 279, 289, 676, 1113, 1411
BstSFI CTRYAG 1 cut(s) 513
BstSLI GKGCMC 1 cut(s) 1501
BstUI CGCG 2 cut(s) 74, 312
BstV1I GCAGC 1 cut(s) 42
BstV2I GAAGAC 4 cut(s) 83, 90, 860, 866
BstX2I RGATCY 3 cut(s) 772, 1336, 1399
BstYI RGATCY 3 cut(s) 772, 1336, 1399
Bsu36I CCTNAGG 2 cut(s) 26, 1266
BsuI GTATCC 1 cut(s) 1319
BsuRI GGCC 5 cut(s) 24, 128, 164, 1235, 1271
BtgI CCRYGG 3 cut(s) 19, 39, 50
BtrI CACGTC 1 cut(s) 1002
BtsCI GGATG 3 cut(s) 391, 425, 555
Cac8I GCNNGC 5 cut(s) 84, 126, 166, 672, 732
CciI TCATGA 2 cut(s) 531, 969
CfoI GCGC 2 cut(s) 74, 312
Cfr10I RCCGGY 1 cut(s) 863
Cfr13I GGNCC 3 cut(s) 126, 330, 1233
CseI GACGC 2 cut(s) 88, 955
Csp6I GTAC 2 cut(s) 353, 1021
CspAI ACCGGT 1 cut(s) 863
CviQI GTAC 2 cut(s) 353, 1021
DdeI CTNAG 9 cut(s) 26, 339, 462, 839, 1157, 1171, 1266, 1296, 1377
DpnI GATC 3 cut(s) 774, 1338, 1401
DpnII GATC 3 cut(s) 772, 1336, 1399
Eam1104I CTCTTC 1 cut(s) 933
EarI CTCTTC 1 cut(s) 933
Eco130I CCWWGG 3 cut(s) 159, 660, 1330
Eco24I GRGCYC 2 cut(s) 1068, 1172
Eco31I GGTCTC 4 cut(s) 248, 791, 1046, 1160
Eco47I GGWCC 1 cut(s) 330
Eco57I CTGAAG 2 cut(s) 132, 1472
Eco72I CACGTG 2 cut(s) 34, 1502
Eco81I CCTNAGG 2 cut(s) 26, 1266
Eco91I GGTNACC 1 cut(s) 609
EcoO109I RGGNCCY 1 cut(s) 330
EcoO65I GGTNACC 1 cut(s) 609
EcoRII CCWGG 4 cut(s) 289, 676, 1113, 1411
EcoT14I CCWWGG 3 cut(s) 159, 660, 1330
EcoT22I ATGCAT 1 cut(s) 406
EcoT38I GRGCYC 2 cut(s) 1068, 1172
ErhI CCWWGG 3 cut(s) 159, 660, 1330
Esp3I CGTCTC 1 cut(s) 1008
FalI AAGNNNNNCTT 2 cut(s) 1323, 1355
FaqI GGGAC 2 cut(s) 343, 1213
FauI CCCGC 1 cut(s) 117
FblI GTMKAC 1 cut(s) 1581
Fnu4HI GCNGC 3 cut(s) 56, 87, 750
FokI GGATG 3 cut(s) 398, 432, 542
FriOI GRGCYC 2 cut(s) 1068, 1172
Fsp4HI GCNGC 3 cut(s) 56, 87, 750
FspBI CTAG 1 cut(s) 1041
GlaI GCGC 2 cut(s) 73, 311
GluI GCNGC 3 cut(s) 56, 87, 750
HaeIII GGCC 5 cut(s) 24, 128, 164, 1235, 1271
HapII CCGG 4 cut(s) 258, 280, 816, 864
HgaI GACGC 2 cut(s) 88, 955
HhaI GCGC 2 cut(s) 74, 312
Hin6I GCGC 2 cut(s) 72, 310
HinP1I GCGC 2 cut(s) 72, 310
HincII GTYRAC 1 cut(s) 706
HindII GTYRAC 1 cut(s) 706
HinfI GANTC 6 cut(s) 116, 131, 142, 212, 316, 620
HpaII CCGG 4 cut(s) 258, 280, 816, 864
HphI GGTGA 3 cut(s) 355, 1060, 1103
Hpy166II GTNNAC 5 cut(s) 706, 805, 1023, 1499, 1582
Hpy188I TCNGA 9 cut(s) 68, 121, 253, 458, 1160, 1174, 1218, 1290, 1399
Hpy188III TCNNGA 6 cut(s) 178, 479, 532, 872, 970, 1184
Hpy8I GTNNAC 5 cut(s) 706, 805, 1023, 1499, 1582
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 5 cut(s) 114, 226, 843, 1224, 1447
HpyCH4III ACNGT 2 cut(s) 43, 413
HpyCH4IV ACGT 4 cut(s) 33, 986, 1001, 1501
HpyCH4V TGCA 9 cut(s) 404, 670, 721, 757, 1277, 1420, 1499, 1521, 1573
HpyF10VI GCNNNNNNNGC 8 cut(s) 100, 295, 318, 727, 835, 922, 1232, 1496
HpyF3I CTNAG 9 cut(s) 26, 339, 462, 839, 1157, 1171, 1266, 1296, 1377
HpySE526I ACGT 4 cut(s) 33, 986, 1001, 1501
HspAI GCGC 2 cut(s) 72, 310
Kzo9I GATC 3 cut(s) 772, 1336, 1399
LmnI GCTCC 6 cut(s) 121, 199, 295, 394, 679, 1627
Lsp1109I GCAGC 1 cut(s) 42
LweI GCATC 5 cut(s) 376, 413, 537, 838, 1270
MaeI CTAG 1 cut(s) 1041
MaeII ACGT 4 cut(s) 33, 986, 1001, 1501
MalI GATC 3 cut(s) 774, 1338, 1401
MbiI CCGCTC 2 cut(s) 124, 298
MboI GATC 3 cut(s) 772, 1336, 1399
MflI RGATCY 3 cut(s) 772, 1336, 1399
MhlI GDGCHC 3 cut(s) 1068, 1172, 1501
MlyI GAGTC 3 cut(s) 140, 221, 310
MmeI TCCRAC 1 cut(s) 746
Mph1103I ATGCAT 1 cut(s) 406
MroXI GAANNNNTTC 2 cut(s) 505, 1260
MseI TTAA 5 cut(s) 825, 885, 921, 1341, 1434
MslI CAYNNNNRTG 1 cut(s) 1245
MspCI CTTAAG 2 cut(s) 824, 920
MspI CCGG 4 cut(s) 258, 280, 816, 864
MspR9I CCNGG 6 cut(s) 259, 281, 291, 678, 1115, 1413
Mva1269I GAATGC 2 cut(s) 1297, 1422
MvaI CCWGG 4 cut(s) 291, 678, 1115, 1413
MvnI CGCG 2 cut(s) 74, 312
MwoI GCNNNNNNNGC 8 cut(s) 100, 295, 318, 727, 835, 922, 1232, 1496
NciI CCSGG 2 cut(s) 259, 281
NdeII GATC 3 cut(s) 772, 1336, 1399
NlaIV GGNNCC 2 cut(s) 331, 1207
NmeAIII GCCGAG 2 cut(s) 39, 154
NmuCI GTSAC 6 cut(s) 34, 313, 343, 551, 892, 1502
NsiI ATGCAT 1 cut(s) 406
NspI RCATGY 4 cut(s) 674, 1244, 1497, 1588
PaeI GCATGC 1 cut(s) 674
PagI TCATGA 2 cut(s) 531, 969
PciI ACATGT 3 cut(s) 1240, 1493, 1584
PcsI WCGNNNNNNNCGW 2 cut(s) 47, 176
PctI GAATGC 2 cut(s) 1297, 1422
PdmI GAANNNNTTC 2 cut(s) 505, 1260
PfeI GAWTC 3 cut(s) 116, 142, 620
PfoI TCCNGGA 1 cut(s) 1411
PinAI ACCGGT 1 cut(s) 863
PkrI GCNGC 3 cut(s) 57, 88, 751
PleI GAGTC 3 cut(s) 139, 220, 310
PmaCI CACGTG 2 cut(s) 34, 1502
PmlI CACGTG 2 cut(s) 34, 1502
PpsI GAGTC 3 cut(s) 139, 220, 310
Ppu21I YACGTR 2 cut(s) 34, 1502
PpuMI RGGWCCY 1 cut(s) 330
PscI ACATGT 3 cut(s) 1240, 1493, 1584
Psp5II RGGWCCY 1 cut(s) 330
Psp6I CCWGG 4 cut(s) 289, 676, 1113, 1411
PspCI CACGTG 2 cut(s) 34, 1502
PspEI GGTNACC 1 cut(s) 609
PspGI CCWGG 4 cut(s) 289, 676, 1113, 1411
PspN4I GGNNCC 2 cut(s) 331, 1207
PspPI GGNCC 3 cut(s) 126, 330, 1233
PspPPI RGGWCCY 1 cut(s) 330
PsuI RGATCY 3 cut(s) 772, 1336, 1399
RsaI GTAC 2 cut(s) 354, 1022
RsaNI GTAC 2 cut(s) 353, 1021
RseI CAYNNNNRTG 1 cut(s) 1245
SaqAI TTAA 5 cut(s) 825, 885, 921, 1341, 1434
SatI GCNGC 3 cut(s) 56, 87, 750
Sau3AI GATC 3 cut(s) 772, 1336, 1399
Sau96I GGNCC 3 cut(s) 126, 330, 1233
SchI GAGTC 3 cut(s) 140, 221, 310
ScrFI CCNGG 6 cut(s) 259, 281, 291, 678, 1115, 1413
SduI GDGCHC 3 cut(s) 1068, 1172, 1501
SfaNI GCATC 5 cut(s) 376, 413, 537, 838, 1270
SfcI CTRYAG 1 cut(s) 513
SinI GGWCC 1 cut(s) 330
SmiMI CAYNNNNRTG 1 cut(s) 1245
SmlI CTYRAG 2 cut(s) 824, 920
SmoI CTYRAG 2 cut(s) 824, 920
SphI GCATGC 1 cut(s) 674
SsiI CCGC 6 cut(s) 58, 86, 124, 298, 750, 1592
SspMI CTAG 1 cut(s) 1041
StyD4I CCNGG 6 cut(s) 257, 279, 289, 676, 1113, 1411
StyI CCWWGG 3 cut(s) 159, 660, 1330
TaaI ACNGT 2 cut(s) 43, 413
TaiI ACGT 4 cut(s) 36, 989, 1004, 1504
TaqI TCGA 2 cut(s) 107, 1017
TatI WGTACW 1 cut(s) 1020
TauI GCSGC 2 cut(s) 89, 752
TfiI GAWTC 3 cut(s) 116, 142, 620
Tru1I TTAA 5 cut(s) 825, 885, 921, 1341, 1434
Tru9I TTAA 5 cut(s) 825, 885, 921, 1341, 1434
TseFI GTSAC 6 cut(s) 34, 313, 343, 551, 892, 1502
TseI GCWGC 1 cut(s) 55
Tsp45I GTSAC 6 cut(s) 34, 313, 343, 551, 892, 1502
TspDTI ATGAA 5 cut(s) 292, 548, 986, 1269, 1439
TspGWI ACGGA 2 cut(s) 554, 1301
Vha464I CTTAAG 2 cut(s) 824, 920
VneI GTGCAC 1 cut(s) 1497
VpaK11BI GGWCC 1 cut(s) 330
XapI RAATTY 3 cut(s) 61, 433, 493
XceI RCATGY 4 cut(s) 674, 1244, 1497, 1588
XmiI GTMKAC 1 cut(s) 1581
XmnI GAANNNNTTC 2 cut(s) 505, 1260
XspI CTAG 1 cut(s) 1041
Zsp2I ATGCAT 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.