Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

33244556 .. 33249166

Gene Structure 4611 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g42780.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGTCTCACATCTCTGCTAGGAGCTCTTTCTCTTATCCAATAATGTCAGATTCTCTGCCTCTTCCTCTATGTGAAAAAACCAGTGTCAAAGTTCCCACACTGCAGAGAGCCCTAGAAATTGTGATTTTATTCCTCTTCACCTGCCTCCTTGCTTATCGTCTCTTCTCTCTCACTGACCATGGCATTCCATGGCTTCTCGCCTTCCTCTGCGAGTCTTGGTTTGCCTTCAATTGGGTTCTCAACTTCATAACCCAATGGACTCCCATGGACTACAAAACGTACCCCAACAACCTATTGCAACAGGTGCCGGAGCTTCCTGCGGTGGACATGTTCGTATCAACGGCAGATCCAGTGCTAGAGCCGCCTATAGTCACGGTGAACACTGTACTGTCTTTGCTGGCCGTTGATTACCCAGCTCACAAGCTAGCTTGCTACGTATCCGATGACGGATGTTCCCCCCTCACCCTCTTTTCTCTCATTGAAGCTTCGAAGTTTGCTAGGATTTGGGTTCCCTTCTGCAAAAAGTATGACATTCAAGTCAGGGCACCTTTCAGATACTTCTGTGAAGGCGAGTCCACATTGCCAAGCAGCCATTTTCCACCGGAGTTTCTTTTAGAATGGACCAAAGTGAAGGATGAGTATGAAAGTCTCTGCCAAAAGATTGAAGGCGCAGGAGACCATTCGGTACCCCTTGATATTTCTGGAGACTATGCAACTTTTTCTCACAAACAGACTAATAACCATCCTACAGTGATCAAGGTAATATGGGAGAACAAACAAAGACTTTCAGATGGATTACCACATTTAGTTTATGTAGCCCGAGAGAAGCGTCCGAATTACCCACATCATTACAAAGCTGGCGCCATGAATGTTTTGACTAGGGTCTCTGGACTGATGACAAATGCTCCATTTATGTTGAACGTGGACTGCGATATGTATGCCAGCAACTCGAAAATTGTTCTTCACGCAATGTGCTTGTTGCTGGGTTTCAAGCATGAAAAACAAGGTGCATTCGTTCAGTGTCCCCAAATCTGCTATGACTATTTGAAAGATGACCCATTTGGAAACTCAATGAGCGTGACTTTAAAAACATTTTGGCCTGGGATTGCTGGGATTCAAGGACCACTGTATGCAGGAACTGGATGTTTTCACAGACGTAAAGTTATCTATGGTTTATCACTACAAGATAGTACAGGTCATGTTCAAGGAAATTTGGACGTTGAGGCACTGAAAGACCGGTTCGGAAATTCCATGGAGCTCCTCAGCTCAGCAACTAATATTTTAGCAGAGAAAGTTGATCATCCACGAGACCTATCCAGTGCTGTTGAAGAGGCGTGTAAAGTTGCCTGCTGTGGGTTTGAGCATAACACATCCTGGGGGAAACAGGTAGGCTGGATTTATGGGTCGATAACAGAAGACCTTCTAACAGGGATGAAGATCCATGCAAGGGGATGGAAATCCATCTTATGCATGCTTGATCCACCAGGCTTTGTTGGGTCTGCACCAACAAGTGTGCCAGTTATGCTAACCCAGAGGAAGAGGTGGATCACAGGACTCCTAGAAGTTTTGTTCAGCAAAAACAGTCCTATCTTTTCCACCCTCAATGCCAAGCTCGAGTTTAGGATGTGCTTGGCTTACATATGGATTCTAATATGGGGCTTACACTCTATTCCTGCTTTATGCTATTCTCTCCTGCCAGCCTACTGTATCATGACCAACTCTCATTTCCTTCCCAAGATAGGAGAACCGGCTCTCCTAATGTTTGCGGCTCTATTTCTCGGTAACAACTTATACAATCTGTATTTTTACCTTGAATCTGGTCTATCAATCACTGCATGGTGGAACTATCAAAGAATGGGGCCACGAAGCACAGTATTGTCGACGACTTCGTTGCTATTTGGGACCATAAGTGTGGTACTCAAGCTTGTTGGGATTTCTGAGGTGGTATTTGAAGTGACACAAAAGGATGAATACTCCTCTTCTAGTGATGATGATCAAAATGCCAACGATGCTAATGCTGGAGTTGGGGAGATAGTGTGCAGTGTGTGGGTGGTGATTAGCTTTTGGCCCTTTTTGAGAGGGTTGTTTGAGAAGGGAAAATATGGAATTCCATTGTCCACTATACTCAAGTCGGGTGGGTTAGCTGTGCTGTTCATGGTCTGCTGTGGAAAATTCGCATTGCCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

730

Amino Acids

81.58

Weight (kDa)

6.44

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	108 - 397	2.5e-82	Cellulose synthase
Cellulose_synt	PF03552	405 - 665	5.8e-54	Cellulose synthase
Glyco_trans_2_3	PF13632	462 - 588	4.7e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	149
AasI	GACNNNNNNGTC	1 cut(s)	536
Acc36I	ACCTGC	1 cut(s)	149
Acc65I	GGTACC	1 cut(s)	685
AccB1I	GGYRCC	4 cut(s)	304, 544, 685, 860
AccI	GTMKAC	1 cut(s)	1880
AciI	CCGC	3 cut(s)	320, 362, 1766
AclWI	GGATC	4 cut(s)	341, 1432, 1472, 1553
AcoI	YGGCCR	1 cut(s)	399
AcsI	RAATTY	4 cut(s)	1210, 1246, 2106, 2171
AcyI	GRCGYC	1 cut(s)	861
AfaI	GTAC	5 cut(s)	281, 387, 687, 1192, 1917
AfiI	CCNNNNNNNGG	4 cut(s)	231, 1353, 1447, 1739
AflIII	ACRYGT	1 cut(s)	327
AgeI	ACCGGT	1 cut(s)	1236
AjnI	CCWGG	3 cut(s)	1099, 1373, 1483
AjuI	GAANNNNNNNTTGG	2 cut(s)	1709, 1741
AloI	GAACNNNNNNTCC	2 cut(s)	1737, 1769
Alw21I	GWGCWC	2 cut(s)	26, 1260
Alw26I	GTCTC	7 cut(s)	9, 164, 653, 669, 699, 889, 1302
AlwI	GGATC	4 cut(s)	341, 1432, 1472, 1553
AlwNI	CAGNNNCTG	1 cut(s)	1139
Ama87I	CYCGRG	2 cut(s)	819, 1613
AoxI	GGCC	4 cut(s)	399, 1097, 1859, 2066
ApeKI	GCWGC	1 cut(s)	588
ApoI	RAATTY	4 cut(s)	1210, 1246, 2106, 2171
AsiGI	ACCGGT	1 cut(s)	1236
Asp700I	GAANNNNTTC	1 cut(s)	1419
Asp718I	GGTACC	1 cut(s)	685
AspLEI	GCGC	2 cut(s)	671, 863
AspS9I	GGNCC	5 cut(s)	621, 1121, 1859, 1902, 2067
AsuHPI	GGTGA	4 cut(s)	130, 388, 454, 2065
AsuII	TTCGAA	1 cut(s)	488
AsuNHI	GCTAGC	1 cut(s)	424
AvaI	CYCGRG	2 cut(s)	819, 1613
AvaII	GGWCC	3 cut(s)	621, 1121, 1902
BaeGI	GKGCMC	1 cut(s)	547
BaeI	ACNNNNGTAYC	2 cut(s)	547, 580
BanI	GGYRCC	4 cut(s)	304, 544, 685, 860
BanII	GRGCYC	3 cut(s)	26, 112, 1260
BauI	CACGAG	1 cut(s)	1305
BbsI	GAAGAC	1 cut(s)	1422
Bbv12I	GWGCWC	2 cut(s)	26, 1260
BbvCI	CCTCAGC	1 cut(s)	1262
BbvI	GCAGC	1 cut(s)	600
BccI	CCATC	4 cut(s)	750, 785, 1446, 1469
BceAI	ACGGC	2 cut(s)	357, 386
BcgI	CGANNNNNNTGC	6 cut(s)	920, 954, 1873, 1907, 1997, 2031
BciT130I	CCWGG	3 cut(s)	1101, 1375, 1485
BciVI	GTATCC	1 cut(s)	448
BclI	TGATCA	3 cut(s)	753, 1297, 1993
BcoDI	GTCTC	7 cut(s)	9, 164, 653, 669, 699, 889, 1302
BfaI	CTAG	8 cut(s)	18, 113, 356, 425, 498, 879, 1559, 1983
BfmI	CTRYAG	3 cut(s)	101, 366, 747
BfoI	RGCGCY	1 cut(s)	864
BfuAI	ACCTGC	1 cut(s)	149
BfuI	GTATCC	1 cut(s)	448
BisI	GCNGC	3 cut(s)	362, 589, 1767
BlpI	GCTNAGC	1 cut(s)	1267
BlsI	GCNGC	3 cut(s)	363, 590, 1768
Bme1390I	CCNGG	3 cut(s)	1101, 1375, 1485
Bme18I	GGWCC	3 cut(s)	621, 1121, 1902
BmeT110I	CYCGRG	2 cut(s)	819, 1613
BmgT120I	GGNCC	5 cut(s)	621, 1121, 1859, 1902, 2067
BmiI	GGNNCC	7 cut(s)	306, 510, 546, 687, 862, 1860, 1903
BmrFI	CCNGG	3 cut(s)	1101, 1375, 1485
BmsI	GCATC	1 cut(s)	1999
BmtI	GCTAGC	1 cut(s)	428
BoxI	GACNNNNGTC	1 cut(s)	881
BpiI	GAAGAC	1 cut(s)	1422
BpmI	CTGGAG	2 cut(s)	723, 2040
Bpu10I	CCTNAGC	1 cut(s)	1262
Bpu1102I	GCTNAGC	1 cut(s)	1267
Bpu14I	TTCGAA	1 cut(s)	488
BpuEI	CTTGAG	2 cut(s)	1904, 2111
BsaAI	YACGTR	1 cut(s)	436
BsaBI	GATNNNNATC	3 cut(s)	1436, 1456, 1992
BsaHI	GRCGYC	1 cut(s)	861
BsaI	GGTCTC	3 cut(s)	669, 889, 1302
BsaJI	CCNNGG	6 cut(s)	178, 188, 264, 1100, 1251, 1374
BsaWI	WCCGGW	2 cut(s)	601, 1236
BsaXI	ACNNNNNCTCC	6 cut(s)	889, 919, 1737, 1767, 2021, 2051
Bsc4I	CCNNNNNNNGG	4 cut(s)	231, 1353, 1447, 1739
Bse118I	RCCGGY	2 cut(s)	1236, 1747
Bse1I	ACTGG	5 cut(s)	81, 350, 1144, 1317, 1517
Bse3DI	GCAATG	3 cut(s)	578, 975, 2177
Bse8I	GATNNNNATC	3 cut(s)	1436, 1456, 1992
BseBI	CCWGG	3 cut(s)	1101, 1375, 1485
BseDI	CCNNGG	6 cut(s)	178, 188, 264, 1100, 1251, 1374
BseJI	GATNNNNATC	3 cut(s)	1436, 1456, 1992
BseLI	CCNNNNNNNGG	4 cut(s)	231, 1353, 1447, 1739
BseMI	GCAATG	3 cut(s)	578, 975, 2177
BseMII	CTCAG	3 cut(s)	1276, 1281, 1929
BseNI	ACTGG	5 cut(s)	81, 350, 1144, 1317, 1517
BseRI	GAGGAG	2 cut(s)	1250, 1966
BseSI	GKGCMC	1 cut(s)	547
BseXI	GCAGC	1 cut(s)	600
BseYI	CCCAGC	3 cut(s)	412, 982, 1109
BsgI	GTGCAG	2 cut(s)	1485, 2059
BshFI	GGCC	4 cut(s)	401, 1099, 1861, 2068
BshNI	GGYRCC	4 cut(s)	304, 544, 685, 860
BshTI	ACCGGT	1 cut(s)	1236
BsiHKAI	GWGCWC	2 cut(s)	26, 1260
BsiHKCI	CYCGRG	2 cut(s)	819, 1613
BsiSI	CCGG	4 cut(s)	308, 602, 1237, 1748
BslFI	GGGAC	2 cut(s)	1008, 1915
BslI	CCNNNNNNNGG	4 cut(s)	231, 1353, 1447, 1739
BsmAI	GTCTC	7 cut(s)	9, 164, 653, 669, 699, 889, 1302
BsmBI	CGTCTC	1 cut(s)	164
BsmFI	GGGAC	2 cut(s)	1008, 1915
BsmI	GAATGC	2 cut(s)	183, 1010
BsnI	GGCC	4 cut(s)	401, 1099, 1861, 2068
Bso31I	GGTCTC	3 cut(s)	669, 889, 1302
BsoBI	CYCGRG	2 cut(s)	819, 1613
Bsp119I	TTCGAA	1 cut(s)	488
Bsp1286I	GDGCHC	4 cut(s)	26, 112, 547, 1260
Bsp143I	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
Bsp1720I	GCTNAGC	1 cut(s)	1267
Bsp19I	CCATGG	4 cut(s)	178, 188, 264, 1251
BspACI	CCGC	3 cut(s)	320, 362, 1766
BspANI	GGCC	4 cut(s)	401, 1099, 1861, 2068
BspCNI	CTCAG	3 cut(s)	1275, 1280, 1930
BspHI	TCATGA	1 cut(s)	1710
BspLI	GGNNCC	7 cut(s)	306, 510, 546, 687, 862, 1860, 1903
BspMAI	CTGCAG	1 cut(s)	105
BspMI	ACCTGC	1 cut(s)	149
BspOI	GCTAGC	1 cut(s)	428
BspPI	GGATC	4 cut(s)	341, 1432, 1472, 1553
BspT104I	TTCGAA	1 cut(s)	488
BspT107I	GGYRCC	4 cut(s)	304, 544, 685, 860
BspTNI	GGTCTC	3 cut(s)	669, 889, 1302
BsrDI	GCAATG	3 cut(s)	578, 975, 2177
BsrFI	RCCGGY	2 cut(s)	1236, 1747
BsrI	ACTGG	5 cut(s)	81, 350, 1144, 1317, 1517
BssAI	RCCGGY	2 cut(s)	1236, 1747
BssECI	CCNNGG	6 cut(s)	178, 188, 264, 1100, 1251, 1374
BssMI	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
BssNI	GRCGYC	1 cut(s)	861
BssSI	CACGAG	1 cut(s)	1305
BssT1I	CCWWGG	4 cut(s)	178, 188, 264, 1251
Bst2BI	CACGAG	1 cut(s)	1305
Bst2UI	CCWGG	3 cut(s)	1101, 1375, 1485
Bst4CI	ACNGT	8 cut(s)	376, 385, 390, 751, 1128, 1583, 1706, 1873
Bst6I	CTCTTC	6 cut(s)	66, 140, 167, 1323, 1532, 1984
BstACI	GRCGYC	1 cut(s)	861
BstAPI	GCANNNNNTGC	1 cut(s)	304
BstBAI	YACGTR	1 cut(s)	436
BstBI	TTCGAA	1 cut(s)	488
BstC8I	GCNNGC	8 cut(s)	399, 426, 430, 859, 943, 1348, 1472, 1698
BstDEI	CTNAG	3 cut(s)	1262, 1267, 1938
BstDSI	CCRYGG	4 cut(s)	178, 188, 264, 1251
BstH2I	RGCGCY	1 cut(s)	864
BstHHI	GCGC	2 cut(s)	671, 863
BstKTI	GATC	7 cut(s)	349, 756, 1300, 1440, 1480, 1548, 1996
BstMAI	GTCTC	7 cut(s)	9, 164, 653, 669, 699, 889, 1302
BstMBI	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
BstMWI	GCNNNNNNNGC	4 cut(s)	304, 361, 1522, 2009
BstNI	CCWGG	3 cut(s)	1101, 1375, 1485
BstNSI	RCATGY	2 cut(s)	331, 1474
BstPAI	GACNNNNGTC	1 cut(s)	881
BstSCI	CCNGG	3 cut(s)	1099, 1373, 1483
BstSFI	CTRYAG	3 cut(s)	101, 366, 747
BstSLI	GKGCMC	1 cut(s)	547
BstSNI	TACGTA	1 cut(s)	436
BstV1I	GCAGC	1 cut(s)	600
BstV2I	GAAGAC	1 cut(s)	1422
BstX2I	RGATCY	2 cut(s)	346, 1437
BstXI	CCANNNNNNTGG	1 cut(s)	1912
BstYI	RGATCY	2 cut(s)	346, 1437
BsuI	GTATCC	1 cut(s)	448
BsuRI	GGCC	4 cut(s)	401, 1099, 1861, 2068
BtgI	CCRYGG	4 cut(s)	178, 188, 264, 1251
BtsI	GCAGTG	3 cut(s)	98, 1830, 2047
BveI	ACCTGC	1 cut(s)	149
Cac8I	GCNNGC	8 cut(s)	399, 426, 430, 859, 943, 1348, 1472, 1698
CaiI	CAGNNNCTG	1 cut(s)	1139
CciI	TCATGA	1 cut(s)	1710
CfoI	GCGC	2 cut(s)	671, 863
Cfr10I	RCCGGY	2 cut(s)	1236, 1747
Cfr13I	GGNCC	5 cut(s)	621, 1121, 1859, 1902, 2067
CseI	GACGC	1 cut(s)	818
Csp6I	GTAC	5 cut(s)	280, 386, 686, 1191, 1916
CspAI	ACCGGT	1 cut(s)	1236
CspCI	CAANNNNNGTGG	2 cut(s)	2116, 2151
CviQI	GTAC	5 cut(s)	280, 386, 686, 1191, 1916
DdeI	CTNAG	3 cut(s)	1262, 1267, 1938
DinI	GGCGCC	1 cut(s)	862
DpnI	GATC	7 cut(s)	348, 755, 1299, 1439, 1479, 1547, 1995
DpnII	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
DraI	TTTAAA	1 cut(s)	1086
DrdI	GACNNNNNNGTC	1 cut(s)	536
DseDI	GACNNNNNNGTC	1 cut(s)	536
EaeI	YGGCCR	1 cut(s)	399
Eam1104I	CTCTTC	6 cut(s)	66, 140, 167, 1323, 1532, 1984
EarI	CTCTTC	6 cut(s)	66, 140, 167, 1323, 1532, 1984
Ecl136II	GAGCTC	2 cut(s)	24, 1258
Eco105I	TACGTA	1 cut(s)	436
Eco130I	CCWWGG	4 cut(s)	178, 188, 264, 1251
Eco24I	GRGCYC	3 cut(s)	26, 112, 1260
Eco31I	GGTCTC	3 cut(s)	669, 889, 1302
Eco47I	GGWCC	3 cut(s)	621, 1121, 1902
Eco53kI	GAGCTC	2 cut(s)	24, 1258
Eco88I	CYCGRG	2 cut(s)	819, 1613
EcoICRI	GAGCTC	2 cut(s)	24, 1258
EcoRI	GAATTC	1 cut(s)	2106
EcoRII	CCWGG	3 cut(s)	1099, 1373, 1483
EcoT14I	CCWWGG	4 cut(s)	178, 188, 264, 1251
EcoT22I	ATGCAT	1 cut(s)	1472
EcoT38I	GRGCYC	3 cut(s)	26, 112, 1260
EgeI	GGCGCC	1 cut(s)	862
EheI	GGCGCC	1 cut(s)	862
ErhI	CCWWGG	4 cut(s)	178, 188, 264, 1251
Esp3I	CGTCTC	1 cut(s)	164
FaqI	GGGAC	2 cut(s)	1008, 1915
FauNDI	CATATG	1 cut(s)	1640
FbaI	TGATCA	3 cut(s)	753, 1297, 1993
FblI	GTMKAC	1 cut(s)	1880
Fnu4HI	GCNGC	3 cut(s)	362, 589, 1767
FriOI	GRGCYC	3 cut(s)	26, 112, 1260
Fsp4HI	GCNGC	3 cut(s)	362, 589, 1767
FspBI	CTAG	8 cut(s)	18, 113, 356, 425, 498, 879, 1559, 1983
GlaI	GCGC	2 cut(s)	670, 862
GluI	GCNGC	3 cut(s)	362, 589, 1767
GsaI	CCCAGC	3 cut(s)	416, 986, 1113
GsuI	CTGGAG	2 cut(s)	723, 2040
HaeII	RGCGCY	1 cut(s)	864
HaeIII	GGCC	4 cut(s)	401, 1099, 1861, 2068
HapII	CCGG	4 cut(s)	308, 602, 1237, 1748
HgaI	GACGC	1 cut(s)	818
HhaI	GCGC	2 cut(s)	671, 863
Hin1I	GRCGYC	1 cut(s)	861
Hin6I	GCGC	2 cut(s)	669, 861
HinP1I	GCGC	2 cut(s)	669, 861
HincII	GTYRAC	1 cut(s)	1881
HindII	GTYRAC	1 cut(s)	1881
HindIII	AAGCTT	2 cut(s)	483, 1922
HinfI	GANTC	8 cut(s)	50, 212, 259, 572, 1114, 1554, 1645, 1814
HpaII	CCGG	4 cut(s)	308, 602, 1237, 1748
HphI	GGTGA	4 cut(s)	130, 388, 454, 2065
Hpy166II	GTNNAC	6 cut(s)	325, 379, 576, 925, 1881, 2118
Hpy188I	TCNGA	7 cut(s)	49, 442, 554, 790, 834, 1244, 1939
Hpy188III	TCNNGA	3 cut(s)	702, 888, 1711
Hpy8I	GTNNAC	6 cut(s)	325, 379, 576, 925, 1881, 2118
Hpy99I	CGWCG	1 cut(s)	1885
HpyAV	CCTTC	9 cut(s)	211, 235, 523, 560, 625, 659, 1430, 1739, 2086
HpyCH4III	ACNGT	8 cut(s)	376, 385, 390, 751, 1128, 1583, 1706, 1873
HpyCH4IV	ACGT	5 cut(s)	278, 435, 921, 1156, 1218
HpyF10VI	GCNNNNNNNGC	4 cut(s)	304, 361, 1522, 2009
HpyF3I	CTNAG	3 cut(s)	1262, 1267, 1938
HpySE526I	ACGT	5 cut(s)	278, 435, 921, 1156, 1218
Hsp92I	GRCGYC	1 cut(s)	861
HspAI	GCGC	2 cut(s)	669, 861
KasI	GGCGCC	1 cut(s)	860
KpnI	GGTACC	1 cut(s)	689
Ksp22I	TGATCA	3 cut(s)	753, 1297, 1993
Kzo9I	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
LmnI	GCTCC	5 cut(s)	21, 310, 910, 1255, 1263
Lsp1109I	GCAGC	1 cut(s)	600
LweI	GCATC	1 cut(s)	1999
MaeI	CTAG	8 cut(s)	18, 113, 356, 425, 498, 879, 1559, 1983
MaeII	ACGT	5 cut(s)	278, 435, 921, 1156, 1218
MaeIII	GTNAC	4 cut(s)	370, 1078, 1781, 1954
MalI	GATC	7 cut(s)	348, 755, 1299, 1439, 1479, 1547, 1995
MboI	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
MboII	GAAGA	9 cut(s)	53, 127, 154, 953, 1340, 1427, 1447, 1549, 1971
MfeI	CAATTG	1 cut(s)	229
MflI	RGATCY	2 cut(s)	346, 1437
MhlI	GDGCHC	4 cut(s)	26, 112, 547, 1260
MluCI	AATT	8 cut(s)	117, 229, 835, 954, 1210, 1246, 2106, 2171
Mly113I	GGCGCC	1 cut(s)	861
MlyI	GAGTC	4 cut(s)	221, 253, 581, 1548
Mph1103I	ATGCAT	1 cut(s)	1472
MroXI	GAANNNNTTC	1 cut(s)	1419
MseI	TTAA	1 cut(s)	1085
MslI	CAYNNNNRTG	1 cut(s)	1910
MspI	CCGG	4 cut(s)	308, 602, 1237, 1748
MspR9I	CCNGG	3 cut(s)	1101, 1375, 1485
MunI	CAATTG	1 cut(s)	229
Mva1269I	GAATGC	2 cut(s)	183, 1010
MvaI	CCWGG	3 cut(s)	1101, 1375, 1485
MwoI	GCNNNNNNNGC	4 cut(s)	304, 361, 1522, 2009
NarI	GGCGCC	1 cut(s)	861
NcoI	CCATGG	4 cut(s)	178, 188, 264, 1251
NdeI	CATATG	1 cut(s)	1640
NdeII	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
NheI	GCTAGC	1 cut(s)	424
NlaIV	GGNNCC	7 cut(s)	306, 510, 546, 687, 862, 1860, 1903
NmuCI	GTSAC	3 cut(s)	370, 1078, 1954
NsiI	ATGCAT	1 cut(s)	1472
NspI	RCATGY	2 cut(s)	331, 1474
NspV	TTCGAA	1 cut(s)	488
PaeI	GCATGC	1 cut(s)	1474
PaeR7I	CTCGAG	1 cut(s)	1613
PagI	TCATGA	1 cut(s)	1710
PaqCI	CACCTGC	1 cut(s)	149
PciI	ACATGT	1 cut(s)	327
PcsI	WCGNNNNNNNCGW	2 cut(s)	927, 1886
PctI	GAATGC	2 cut(s)	183, 1010
PdmI	GAANNNNTTC	1 cut(s)	1419
PfeI	GAWTC	4 cut(s)	50, 1114, 1645, 1814
PinAI	ACCGGT	1 cut(s)	1236
PkrI	GCNGC	3 cut(s)	363, 590, 1768
PleI	GAGTC	4 cut(s)	220, 253, 580, 1548
PluTI	GGCGCC	1 cut(s)	864
PpsI	GAGTC	4 cut(s)	220, 253, 580, 1548
Ppu21I	YACGTR	1 cut(s)	436
PscI	ACATGT	1 cut(s)	327
PshAI	GACNNNNGTC	1 cut(s)	881
Psp124BI	GAGCTC	2 cut(s)	26, 1260
Psp6I	CCWGG	3 cut(s)	1099, 1373, 1483
PspFI	CCCAGC	3 cut(s)	412, 982, 1109
PspGI	CCWGG	3 cut(s)	1099, 1373, 1483
PspN4I	GGNNCC	7 cut(s)	306, 510, 546, 687, 862, 1860, 1903
PspPI	GGNCC	5 cut(s)	621, 1121, 1859, 1902, 2067
PspXI	VCTCGAGB	1 cut(s)	1613
PstI	CTGCAG	1 cut(s)	105
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	2 cut(s)	346, 1437
RsaI	GTAC	5 cut(s)	281, 387, 687, 1192, 1917
RsaNI	GTAC	5 cut(s)	280, 386, 686, 1191, 1916
RseI	CAYNNNNRTG	1 cut(s)	1910
SacI	GAGCTC	2 cut(s)	26, 1260
SalI	GTCGAC	1 cut(s)	1879
SaqAI	TTAA	1 cut(s)	1085
SatI	GCNGC	3 cut(s)	362, 589, 1767
Sau3AI	GATC	7 cut(s)	346, 753, 1297, 1437, 1477, 1545, 1993
Sau96I	GGNCC	5 cut(s)	621, 1121, 1859, 1902, 2067
SchI	GAGTC	4 cut(s)	221, 253, 581, 1548
ScrFI	CCNGG	3 cut(s)	1101, 1375, 1485
SduI	GDGCHC	4 cut(s)	26, 112, 547, 1260
SfaNI	GCATC	1 cut(s)	1999
SfcI	CTRYAG	3 cut(s)	101, 366, 747
SfoI	GGCGCC	1 cut(s)	862
Sfr274I	CTCGAG	1 cut(s)	1613
SfuI	TTCGAA	1 cut(s)	488
SinI	GGWCC	3 cut(s)	621, 1121, 1902
SlaI	CTCGAG	1 cut(s)	1613
SmiMI	CAYNNNNRTG	1 cut(s)	1910
SmlI	CTYRAG	3 cut(s)	1613, 1919, 2126
SmoI	CTYRAG	3 cut(s)	1613, 1919, 2126
SnaBI	TACGTA	1 cut(s)	436
SphI	GCATGC	1 cut(s)	1474
Sse9I	AATT	8 cut(s)	117, 229, 835, 954, 1210, 1246, 2106, 2171
SsiI	CCGC	3 cut(s)	320, 362, 1766
SspDI	GGCGCC	1 cut(s)	860
SspI	AATATT	1 cut(s)	1279
SspMI	CTAG	8 cut(s)	18, 113, 356, 425, 498, 879, 1559, 1983
SstI	GAGCTC	2 cut(s)	26, 1260
StyD4I	CCNGG	3 cut(s)	1099, 1373, 1483
StyI	CCWWGG	4 cut(s)	178, 188, 264, 1251
TaaI	ACNGT	8 cut(s)	376, 385, 390, 751, 1128, 1583, 1706, 1873
TaiI	ACGT	5 cut(s)	281, 438, 924, 1159, 1221
TaqI	TCGA	5 cut(s)	488, 950, 1406, 1614, 1880
TasI	AATT	8 cut(s)	117, 229, 835, 954, 1210, 1246, 2106, 2171
TatI	WGTACW	2 cut(s)	385, 1190
TauI	GCSGC	2 cut(s)	364, 1769
TfiI	GAWTC	4 cut(s)	50, 1114, 1645, 1814
Tru1I	TTAA	1 cut(s)	1085
Tru9I	TTAA	1 cut(s)	1085
TseFI	GTSAC	3 cut(s)	370, 1078, 1954
TseI	GCWGC	1 cut(s)	588
Tsp45I	GTSAC	3 cut(s)	370, 1078, 1954
TspDTI	ATGAA	7 cut(s)	235, 657, 881, 1011, 1448, 1983, 2143
TspGWI	ACGGA	1 cut(s)	462
VpaK11BI	GGWCC	3 cut(s)	621, 1121, 1902
XapI	RAATTY	4 cut(s)	1210, 1246, 2106, 2171
XceI	RCATGY	2 cut(s)	331, 1474
XhoI	CTCGAG	1 cut(s)	1613
XmiI	GTMKAC	1 cut(s)	1880
XmnI	GAANNNNTTC	1 cut(s)	1419
XspI	CTAG	8 cut(s)	18, 113, 356, 425, 498, 879, 1559, 1983
Zsp2I	ATGCAT	1 cut(s)	1472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.