Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

74953167 .. 74958255

Gene Structure 5089 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52743

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGGCCAACTCAAACTCTCTTCCTCTCTATGAAAGGGTTAAGCACAGAAACACACTGCAAAAAGTCATGGAGTTTATAATCCTCTTCCTCCTTCTTTCACTCCTTGTTTATCGTCTCCTCTCTTTCAACAACCATGGTTTATCCTGGTCCATCGCATTCCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATGAGCAACAAATGGATTCTTGTTGACCATAAACCATACCCCGACCGCCTATTGCAATGGGTGCCTAAGGATGAGCTTCCTGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCGTAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCAAAGTTTGCTAAGCTTTGGGTTCCCTTTTGCAAAAAGTACAGTGTTCAAGTTAGATCTCCCTTTAGATACTTCACCAATAATTCCACGCTTTCTGGAATTAATAATACTAGCTCAATGGAATTCAAGCATGAATGGAAGAGAGTGAAGGATGAGTATGAGCAACTTAGCAGCAAAATCGAGGATGTGGTGCGCAAATCTATCAATCCGTCTGATATTATTGAATGCGACTTTTCAGTGTTCTCAAATGTACAGCGTAATGATCATCCAACAATAATCAAGGTTGTATTGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCACATTTAGTTTATATATCCAGAGAAAAACGGCCGAAGCATCCACATCATGCCAAAGCCGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACCAATGCTCCATACATGCTAAATGTGGACTGCGACATGTTTGTCAACAGCCCGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTTTTCTGTGACGGTCTAAAGGATGATCCTTTCGGAAATCAGATGATAGTTTGGTGGAAGTATGTGGGACAAGGAGTTTCAGGAATTCAGGGACCTTTTTATTCCGGATCAGGATGTGTTCATACACGAAAAGTTATCTATGGTCTATCCCCCAATTACGTGAAAGTTGAAGAAACAAATGCGAAAAACTTGATGAACGGTAAATCAGCCGATGAAGAGTTACTTGATGTATTTGGGAAGGAATTTACCAAATCAGCTGCTGATGCTTTAAACGGGAAGGCAGTGTGCCCAGACACGCTTACAGAAACTATTGAGGCTGCATACCAAGTTGCTGGTGCTGGATATGAGCATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCCTCAACCGAAGATGCCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTGTTTATGCACCAGACCCACCAGCCTTTCTAGAATGCGCGCCTACTGGTGGGCCTGCTGTAATGACCCAACAGAAAAGGTGGGCCACCGGCCTGCTTGAAATCCTCCTCAGTAAAAACTGCCCCATATTTGGTACTCTCTTTGCAAACCTCCGATTCAGGCAGTGCTTGGGCTACTTCAGTATCCTTTCATGGGGGATAAGCTCAGTTCTCGAGCTATACTATGCTGCTCTGCCAGCCTATAGTCTCATCACCAACTCATACTTCTTGCCGAAGGGCCAAGAACCGGCTTACTATATACTCGCAGCTGTGTTTCTGATCTACACTATCTACACTTCATCCGAGTACCTGAGAACCGGTCAATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAATCTCAATGAGTGCATGGCTTTTTGGATTTGTTAGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTCGAGGTAACACGAAAAGACCAATCTACATCAAGCGATGAAGGCACTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCATACCTCCCACGACAATGTTGTTTCTGCAATTAACAGCACTGGCCACCGCTTTGTTGGGGCTTCAACCACCAGCTCGTGATGGGGTGGAATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTGGTGGTATGCTTATTACCATTTTTGAAAGGTCTGTTTGGATCAGGAAAATATGGAATTCCTCTGTCTACCATATTTAAGTCTGCTGTTCTTGCACTATTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

758

Amino Acids

85.06

Weight (kDa)

6.55

Isoelectric Point (pI)

39.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	95 - 396	1.6e-86	Cellulose synthase
Cellulose_synt	PF03552	411 - 751	4.7e-52	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
AasI	GACNNNNNNGTC	1 cut(s)	911
Acc16I	TGCGCA	1 cut(s)	641
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	1849
AccI	GTMKAC	2 cut(s)	285, 2219
AccII	CGCG	1 cut(s)	1496
AccIII	TCCGGA	1 cut(s)	1112
AciI	CCGC	2 cut(s)	244, 2076
AclWI	GGATC	7 cut(s)	967, 1028, 1123, 1392, 1405, 1446, 2200
AcoI	YGGCCR	3 cut(s)	3, 803, 2070
AcsI	RAATTY	5 cut(s)	569, 1092, 1250, 2000, 2208
AcuI	CTGAAG	4 cut(s)	166, 1618, 2001, 2010
AdeI	CACNNNGTG	1 cut(s)	2265
AfaI	GTAC	4 cut(s)	488, 699, 1591, 1802
AfiI	CCNNNNNNNGG	8 cut(s)	186, 831, 1422, 1505, 1586, 1648, 1741, 1849
AflIII	ACRYGT	1 cut(s)	906
AgeI	ACCGGT	1 cut(s)	1811
AjnI	CCWGG	1 cut(s)	143
AjuI	GAANNNNNNNTTGG	2 cut(s)	1703, 1735
Alw21I	GWGCWC	1 cut(s)	171
Alw26I	GTCTC	6 cut(s)	119, 357, 862, 1706, 1919, 2126
AlwI	GGATC	7 cut(s)	967, 1028, 1123, 1392, 1405, 1446, 2200
AlwNI	CAGNNNCTG	1 cut(s)	1268
Ama87I	CYCGRG	1 cut(s)	1667
Aor13HI	TCCGGA	1 cut(s)	1112
AoxI	GGCC	8 cut(s)	3, 803, 834, 1508, 1539, 1546, 1732, 2070
ApeKI	GCWGC	5 cut(s)	618, 1265, 1325, 1682, 1760
ApoI	RAATTY	5 cut(s)	569, 1092, 1250, 2000, 2208
AseI	ATTAAT	1 cut(s)	549
AsiGI	ACCGGT	1 cut(s)	1811
AspLEI	GCGC	3 cut(s)	642, 1496, 1498
AspS9I	GGNCC	6 cut(s)	147, 834, 1100, 1508, 1539, 1732
AsuC2I	CCSGG	1 cut(s)	832
AsuHPI	GGTGA	5 cut(s)	187, 415, 514, 1699, 1996
AsuII	TTCGAA	1 cut(s)	758
AvaI	CYCGRG	1 cut(s)	1667
AvaII	GGWCC	2 cut(s)	147, 1100
AxyI	CCTNAGG	1 cut(s)	264
BaeGI	GKGCMC	1 cut(s)	1298
BaeI	ACNNNNGTAYC	2 cut(s)	1621, 1654
BalI	TGGCCA	2 cut(s)	5, 2072
BamHI	GGATCC	1 cut(s)	1397
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	1 cut(s)	171
BauI	CACGAG	1 cut(s)	2103
BbsI	GAAGAC	1 cut(s)	1924
Bbv12I	GWGCWC	1 cut(s)	171
BbvI	GCAGC	5 cut(s)	630, 1252, 1312, 1669, 1772
BccI	CCATC	4 cut(s)	158, 401, 1380, 2102
BceAI	ACGGC	1 cut(s)	818
BcgI	CGANNNNNNTGC	2 cut(s)	607, 641
BciT130I	CCWGG	1 cut(s)	145
BciVI	GTATCC	1 cut(s)	1649
BclI	TGATCA	1 cut(s)	709
BcnI	CCSGG	1 cut(s)	832
BcoDI	GTCTC	6 cut(s)	119, 357, 862, 1706, 1919, 2126
BfaI	CTAG	4 cut(s)	386, 558, 852, 1487
BfmI	CTRYAG	2 cut(s)	279, 1696
BfuI	GTATCC	1 cut(s)	1649
BglII	AGATCT	1 cut(s)	503
BisI	GCNGC	5 cut(s)	619, 1266, 1326, 1683, 1761
BlpI	GCTNAGC	1 cut(s)	459
BlsI	GCNGC	5 cut(s)	620, 1267, 1327, 1684, 1762
Bme1390I	CCNGG	2 cut(s)	145, 832
Bme18I	GGWCC	2 cut(s)	147, 1100
BmeT110I	CYCGRG	1 cut(s)	1667
BmgT120I	GGNCC	6 cut(s)	147, 834, 1100, 1508, 1539, 1732
BmiI	GGNNCC	5 cut(s)	261, 471, 835, 1101, 1399
BmrFI	CCNGG	2 cut(s)	145, 832
BmrI	ACTGGG	2 cut(s)	1431, 2015
BmsI	GCATC	4 cut(s)	455, 820, 1261, 1402
BmuI	ACTGGG	2 cut(s)	1431, 2015
BoxI	GACNNNNGTC	1 cut(s)	854
BpiI	GAAGAC	1 cut(s)	1924
Bpu1102I	GCTNAGC	1 cut(s)	459
Bpu14I	TTCGAA	1 cut(s)	758
BpuEI	CTTGAG	1 cut(s)	990
BpuMI	CCSGG	1 cut(s)	832
Bsa29I	ATCGAT	1 cut(s)	763
BsaAI	YACGTR	1 cut(s)	1168
BsaI	GGTCTC	1 cut(s)	2126
BsaJI	CCNNGG	2 cut(s)	133, 831
BsaWI	WCCGGW	2 cut(s)	1112, 1811
BsaXI	ACNNNNNCTCC	4 cut(s)	862, 892, 2123, 2153
Bsc4I	CCNNNNNNNGG	8 cut(s)	186, 831, 1422, 1505, 1586, 1648, 1741, 1849
Bse118I	RCCGGY	3 cut(s)	1544, 1741, 1811
Bse1I	ACTGG	5 cut(s)	1426, 1507, 2014, 2021, 2073
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	2 cut(s)	260, 948
BseAI	TCCGGA	1 cut(s)	1112
BseBI	CCWGG	1 cut(s)	145
BseCI	ATCGAT	1 cut(s)	763
BseDI	CCNNGG	2 cut(s)	133, 831
BseLI	CCNNNNNNNGG	8 cut(s)	186, 831, 1422, 1505, 1586, 1648, 1741, 1849
BseMI	GCAATG	2 cut(s)	260, 948
BseMII	CTCAG	3 cut(s)	1579, 1674, 1796
BseNI	ACTGG	5 cut(s)	1426, 1507, 2014, 2021, 2073
BsePI	GCGCGC	1 cut(s)	1494
BseRI	GAGGAG	2 cut(s)	107, 1553
BseSI	GKGCMC	1 cut(s)	1298
BseX3I	CGGCCG	1 cut(s)	803
BseXI	GCAGC	5 cut(s)	630, 1252, 1312, 1669, 1772
BsgI	GTGCAG	1 cut(s)	2161
Bsh1236I	CGCG	1 cut(s)	1496
Bsh1285I	CGRYCG	2 cut(s)	244, 806
BshFI	GGCC	8 cut(s)	5, 805, 836, 1510, 1541, 1548, 1734, 2072
BshNI	GGYRCC	1 cut(s)	259
BshTI	ACCGGT	1 cut(s)	1811
BshVI	ATCGAT	1 cut(s)	763
BsiEI	CGRYCG	2 cut(s)	244, 806
BsiHKAI	GWGCWC	1 cut(s)	171
BsiHKCI	CYCGRG	1 cut(s)	1667
BsiSI	CCGG	6 cut(s)	831, 1113, 1545, 1742, 1812, 1995
BslFI	GGGAC	3 cut(s)	1089, 1113, 2002
BslI	CCNNNNNNNGG	8 cut(s)	186, 831, 1422, 1505, 1586, 1648, 1741, 1849
BsmAI	GTCTC	6 cut(s)	119, 357, 862, 1706, 1919, 2126
BsmBI	CGTCTC	1 cut(s)	119
BsmFI	GGGAC	3 cut(s)	1089, 1113, 2002
BsmI	GAATGC	3 cut(s)	155, 677, 1496
BsnI	GGCC	8 cut(s)	5, 805, 836, 1510, 1541, 1548, 1734, 2072
Bso31I	GGTCTC	1 cut(s)	2126
BsoBI	CYCGRG	1 cut(s)	1667
Bsp119I	TTCGAA	1 cut(s)	758
Bsp1286I	GDGCHC	2 cut(s)	171, 1298
Bsp13I	TCCGGA	1 cut(s)	1112
Bsp1407I	TGTACA	1 cut(s)	697
Bsp1720I	GCTNAGC	1 cut(s)	459
Bsp19I	CCATGG	1 cut(s)	133
BspACI	CCGC	2 cut(s)	244, 2076
BspANI	GGCC	8 cut(s)	5, 805, 836, 1510, 1541, 1548, 1734, 2072
BspCNI	CTCAG	3 cut(s)	1578, 1673, 1797
BspDI	ATCGAT	1 cut(s)	763
BspEI	TCCGGA	1 cut(s)	1112
BspFNI	CGCG	1 cut(s)	1496
BspLI	GGNNCC	5 cut(s)	261, 471, 835, 1101, 1399
BspMAI	CTGCAG	1 cut(s)	283
BspPI	GGATC	7 cut(s)	967, 1028, 1123, 1392, 1405, 1446, 2200
BspT104I	TTCGAA	1 cut(s)	758
BspT107I	GGYRCC	1 cut(s)	259
BspTNI	GGTCTC	1 cut(s)	2126
BsrDI	GCAATG	2 cut(s)	260, 948
BsrFI	RCCGGY	3 cut(s)	1544, 1741, 1811
BsrGI	TGTACA	1 cut(s)	697
BsrI	ACTGG	5 cut(s)	1426, 1507, 2014, 2021, 2073
BssAI	RCCGGY	3 cut(s)	1544, 1741, 1811
BssECI	CCNNGG	2 cut(s)	133, 831
BssHII	GCGCGC	1 cut(s)	1494
BssSI	CACGAG	1 cut(s)	2103
BssT1I	CCWWGG	1 cut(s)	133
Bst2BI	CACGAG	1 cut(s)	2103
Bst2UI	CCWGG	1 cut(s)	145
Bst4CI	ACNGT	6 cut(s)	337, 346, 491, 1022, 1208, 1930
Bst6I	CTCTTC	4 cut(s)	24, 89, 581, 1218
BstAPI	GCANNNNNTGC	1 cut(s)	259
BstAUI	TGTACA	1 cut(s)	697
BstBAI	YACGTR	1 cut(s)	1168
BstBI	TTCGAA	1 cut(s)	758
BstC8I	GCNNGC	6 cut(s)	167, 391, 1496, 1512, 1550, 1692
BstDEI	CTNAG	6 cut(s)	264, 459, 614, 1565, 1660, 1805
BstDSI	CCRYGG	1 cut(s)	133
BstFNI	CGCG	1 cut(s)	1496
BstHHI	GCGC	3 cut(s)	642, 1496, 1498
BstMAI	GTCTC	6 cut(s)	119, 357, 862, 1706, 1919, 2126
BstMCI	CGRYCG	2 cut(s)	244, 806
BstMWI	GCNNNNNNNGC	5 cut(s)	259, 1271, 1691, 1974, 2243
BstNI	CCWGG	1 cut(s)	145
BstNSI	RCATGY	3 cut(s)	393, 889, 910
BstPAI	GACNNNNGTC	1 cut(s)	854
BstSCI	CCNGG	2 cut(s)	143, 830
BstSFI	CTRYAG	2 cut(s)	279, 1696
BstSLI	GKGCMC	1 cut(s)	1298
BstUI	CGCG	1 cut(s)	1496
BstV1I	GCAGC	5 cut(s)	630, 1252, 1312, 1669, 1772
BstV2I	GAAGAC	1 cut(s)	1924
BstX2I	RGATCY	3 cut(s)	503, 1397, 1451
BstXI	CCANNNNNNTGG	1 cut(s)	1340
BstYI	RGATCY	3 cut(s)	503, 1397, 1451
BstZI	CGGCCG	1 cut(s)	803
Bsu15I	ATCGAT	1 cut(s)	763
Bsu36I	CCTNAGG	1 cut(s)	264
BsuI	GTATCC	1 cut(s)	1649
BsuRI	GGCC	8 cut(s)	5, 805, 836, 1510, 1541, 1548, 1734, 2072
BsuTUI	ATCGAT	1 cut(s)	763
BtgI	CCRYGG	1 cut(s)	133
BtgZI	GCGATG	2 cut(s)	136, 1983
BtsI	GCAGTG	4 cut(s)	53, 1296, 1625, 2149
Cac8I	GCNNGC	6 cut(s)	167, 391, 1496, 1512, 1550, 1692
CaiI	CAGNNNCTG	1 cut(s)	1268
CfoI	GCGC	3 cut(s)	642, 1496, 1498
Cfr10I	RCCGGY	3 cut(s)	1544, 1741, 1811
Cfr13I	GGNCC	6 cut(s)	147, 834, 1100, 1508, 1539, 1732
ClaI	ATCGAT	1 cut(s)	763
Csp6I	GTAC	4 cut(s)	487, 698, 1590, 1801
CspAI	ACCGGT	1 cut(s)	1811
CviQI	GTAC	4 cut(s)	487, 698, 1590, 1801
DdeI	CTNAG	6 cut(s)	264, 459, 614, 1565, 1660, 1805
DraI	TTTAAA	1 cut(s)	1278
DraIII	CACNNNGTG	1 cut(s)	2265
DrdI	GACNNNNNNGTC	1 cut(s)	911
DseDI	GACNNNNNNGTC	1 cut(s)	911
EaeI	YGGCCR	3 cut(s)	3, 803, 2070
EagI	CGGCCG	1 cut(s)	803
Eam1104I	CTCTTC	4 cut(s)	24, 89, 581, 1218
EarI	CTCTTC	4 cut(s)	24, 89, 581, 1218
Ecl136II	GAGCTC	1 cut(s)	169
EclXI	CGGCCG	1 cut(s)	803
Eco130I	CCWWGG	1 cut(s)	133
Eco24I	GRGCYC	1 cut(s)	171
Eco31I	GGTCTC	1 cut(s)	2126
Eco47I	GGWCC	2 cut(s)	147, 1100
Eco52I	CGGCCG	1 cut(s)	803
Eco53kI	GAGCTC	1 cut(s)	169
Eco57I	CTGAAG	4 cut(s)	166, 1618, 2001, 2010
Eco81I	CCTNAGG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	1667
EcoICRI	GAGCTC	1 cut(s)	169
EcoO109I	RGGNCCY	1 cut(s)	1100
EcoRI	GAATTC	3 cut(s)	569, 1092, 2208
EcoRII	CCWGG	1 cut(s)	143
EcoT14I	CCWWGG	1 cut(s)	133
EcoT22I	ATGCAT	1 cut(s)	991
EcoT38I	GRGCYC	1 cut(s)	171
ErhI	CCWWGG	1 cut(s)	133
Esp3I	CGTCTC	1 cut(s)	119
FalI	AAGNNNNNCTT	2 cut(s)	1215, 1247
FaqI	GGGAC	3 cut(s)	1089, 1113, 2002
FbaI	TGATCA	1 cut(s)	709
FblI	GTMKAC	2 cut(s)	285, 2219
Fnu4HI	GCNGC	5 cut(s)	619, 1266, 1326, 1683, 1761
FriOI	GRGCYC	1 cut(s)	171
Fsp4HI	GCNGC	5 cut(s)	619, 1266, 1326, 1683, 1761
FspBI	CTAG	4 cut(s)	386, 558, 852, 1487
FspI	TGCGCA	1 cut(s)	641
GlaI	GCGC	3 cut(s)	641, 1495, 1497
GluI	GCNGC	5 cut(s)	619, 1266, 1326, 1683, 1761
HaeIII	GGCC	8 cut(s)	5, 805, 836, 1510, 1541, 1548, 1734, 2072
HapII	CCGG	6 cut(s)	831, 1113, 1545, 1742, 1812, 1995
HhaI	GCGC	3 cut(s)	642, 1496, 1498
Hin6I	GCGC	3 cut(s)	640, 1494, 1496
HinP1I	GCGC	3 cut(s)	640, 1494, 1496
HincII	GTYRAC	2 cut(s)	223, 916
HindII	GTYRAC	2 cut(s)	223, 916
HindIII	AAGCTT	1 cut(s)	461
HinfI	GANTC	5 cut(s)	214, 760, 855, 1611, 2117
HpaII	CCGG	6 cut(s)	831, 1113, 1545, 1742, 1812, 1995
HphI	GGTGA	5 cut(s)	187, 415, 514, 1699, 1996
Hpy166II	GTNNAC	7 cut(s)	177, 223, 286, 340, 898, 916, 2220
Hpy188III	TCNNGA	9 cut(s)	543, 792, 1089, 1113, 1119, 1487, 1667, 2105, 2196
Hpy8I	GTNNAC	7 cut(s)	177, 223, 286, 340, 898, 916, 2220
HpyAV	CCTTC	8 cut(s)	101, 190, 436, 589, 1240, 1279, 1723, 1967
HpyCH4III	ACNGT	6 cut(s)	337, 346, 491, 1022, 1208, 1930
HpyCH4IV	ACGT	1 cut(s)	1167
HpyF10VI	GCNNNNNNNGC	5 cut(s)	259, 1271, 1691, 1974, 2243
HpyF3I	CTNAG	6 cut(s)	264, 459, 614, 1565, 1660, 1805
HpySE526I	ACGT	1 cut(s)	1167
HspAI	GCGC	3 cut(s)	640, 1494, 1496
Kpn2I	TCCGGA	1 cut(s)	1112
Ksp22I	TGATCA	1 cut(s)	709
LmnI	GCTCC	1 cut(s)	883
Lsp1109I	GCAGC	5 cut(s)	630, 1252, 1312, 1669, 1772
LweI	GCATC	4 cut(s)	455, 820, 1261, 1402
MaeI	CTAG	4 cut(s)	386, 558, 852, 1487
MaeII	ACGT	1 cut(s)	1167
MaeIII	GTNAC	4 cut(s)	295, 1016, 1227, 1939
MflI	RGATCY	3 cut(s)	503, 1397, 1451
MhlI	GDGCHC	2 cut(s)	171, 1298
MlsI	TGGCCA	2 cut(s)	5, 2072
MluCI	AATT	9 cut(s)	529, 546, 569, 1092, 1162, 1250, 2000, 2057, 2208
MluNI	TGGCCA	2 cut(s)	5, 2072
MlyI	GAGTC	1 cut(s)	864
MmeI	TCCRAC	2 cut(s)	740, 1427
Mox20I	TGGCCA	2 cut(s)	5, 2072
Mph1103I	ATGCAT	1 cut(s)	991
MroI	TCCGGA	1 cut(s)	1112
MscI	TGGCCA	2 cut(s)	5, 2072
MseI	TTAA	5 cut(s)	39, 549, 1277, 2060, 2229
MslI	CAYNNNNRTG	2 cut(s)	197, 2042
Msp20I	TGGCCA	2 cut(s)	5, 2072
MspA1I	CMGCKG	2 cut(s)	1265, 1763
MspI	CCGG	6 cut(s)	831, 1113, 1545, 1742, 1812, 1995
MspR9I	CCNGG	2 cut(s)	145, 832
Mva1269I	GAATGC	3 cut(s)	155, 677, 1496
MvaI	CCWGG	1 cut(s)	145
MvnI	CGCG	1 cut(s)	1496
MwoI	GCNNNNNNNGC	5 cut(s)	259, 1271, 1691, 1974, 2243
NciI	CCSGG	1 cut(s)	832
NcoI	CCATGG	1 cut(s)	133
NlaIV	GGNNCC	5 cut(s)	261, 471, 835, 1101, 1399
NmuCI	GTSAC	2 cut(s)	295, 1016
NsbI	TGCGCA	1 cut(s)	641
NsiI	ATGCAT	1 cut(s)	991
NspI	RCATGY	3 cut(s)	393, 889, 910
NspV	TTCGAA	1 cut(s)	758
PaeI	GCATGC	1 cut(s)	393
PaeR7I	CTCGAG	1 cut(s)	1667
PauI	GCGCGC	1 cut(s)	1494
PciI	ACATGT	1 cut(s)	906
PctI	GAATGC	3 cut(s)	155, 677, 1496
PfeI	GAWTC	4 cut(s)	214, 760, 1611, 2117
PflMI	CCANNNNNTGG	1 cut(s)	1849
PinAI	ACCGGT	1 cut(s)	1811
PkrI	GCNGC	5 cut(s)	620, 1267, 1327, 1684, 1762
PleI	GAGTC	1 cut(s)	863
PpsI	GAGTC	1 cut(s)	863
Ppu21I	YACGTR	1 cut(s)	1168
PpuMI	RGGWCCY	1 cut(s)	1100
PscI	ACATGT	1 cut(s)	906
PshAI	GACNNNNGTC	1 cut(s)	854
PshBI	ATTAAT	1 cut(s)	549
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	1 cut(s)	171
Psp5II	RGGWCCY	1 cut(s)	1100
Psp6I	CCWGG	1 cut(s)	143
PspGI	CCWGG	1 cut(s)	143
PspN4I	GGNNCC	5 cut(s)	261, 471, 835, 1101, 1399
PspPI	GGNCC	6 cut(s)	147, 834, 1100, 1508, 1539, 1732
PspPPI	RGGWCCY	1 cut(s)	1100
PsrI	GAACNNNNNNTAC	2 cut(s)	330, 362
PstI	CTGCAG	1 cut(s)	283
PstNI	CAGNNNCTG	1 cut(s)	1268
PsuI	RGATCY	3 cut(s)	503, 1397, 1451
PteI	GCGCGC	1 cut(s)	1494
PvuII	CAGCTG	2 cut(s)	1265, 1763
RsaI	GTAC	4 cut(s)	488, 699, 1591, 1802
RsaNI	GTAC	4 cut(s)	487, 698, 1590, 1801
RseI	CAYNNNNRTG	2 cut(s)	197, 2042
SacI	GAGCTC	1 cut(s)	171
SaqAI	TTAA	5 cut(s)	39, 549, 1277, 2060, 2229
SatI	GCNGC	5 cut(s)	619, 1266, 1326, 1683, 1761
Sau96I	GGNCC	6 cut(s)	147, 834, 1100, 1508, 1539, 1732
SchI	GAGTC	1 cut(s)	864
ScrFI	CCNGG	2 cut(s)	145, 832
SduI	GDGCHC	2 cut(s)	171, 1298
SfaNI	GCATC	4 cut(s)	455, 820, 1261, 1402
SfcI	CTRYAG	2 cut(s)	279, 1696
Sfr274I	CTCGAG	1 cut(s)	1667
SfuI	TTCGAA	1 cut(s)	758
SinI	GGWCC	2 cut(s)	147, 1100
SlaI	CTCGAG	1 cut(s)	1667
SmiMI	CAYNNNNRTG	2 cut(s)	197, 2042
SmlI	CTYRAG	2 cut(s)	1005, 1667
SmoI	CTYRAG	2 cut(s)	1005, 1667
SphI	GCATGC	1 cut(s)	393
Sse9I	AATT	9 cut(s)	529, 546, 569, 1092, 1162, 1250, 2000, 2057, 2208
SsiI	CCGC	2 cut(s)	244, 2076
SspMI	CTAG	4 cut(s)	386, 558, 852, 1487
SstI	GAGCTC	1 cut(s)	171
StyD4I	CCNGG	2 cut(s)	143, 830
StyI	CCWWGG	1 cut(s)	133
TaaI	ACNGT	6 cut(s)	337, 346, 491, 1022, 1208, 1930
TaiI	ACGT	1 cut(s)	1170
TaqI	TCGA	5 cut(s)	627, 758, 763, 1668, 1935
TasI	AATT	9 cut(s)	529, 546, 569, 1092, 1162, 1250, 2000, 2057, 2208
TatI	WGTACW	2 cut(s)	486, 697
TfiI	GAWTC	4 cut(s)	214, 760, 1611, 2117
Tru1I	TTAA	5 cut(s)	39, 549, 1277, 2060, 2229
Tru9I	TTAA	5 cut(s)	39, 549, 1277, 2060, 2229
TseFI	GTSAC	2 cut(s)	295, 1016
TseI	GCWGC	5 cut(s)	618, 1265, 1325, 1682, 1760
Tsp45I	GTSAC	2 cut(s)	295, 1016
TspGWI	ACGGA	1 cut(s)	645
Van91I	CCANNNNNTGG	1 cut(s)	1849
VpaK11BI	GGWCC	2 cut(s)	147, 1100
VspI	ATTAAT	1 cut(s)	549
XapI	RAATTY	5 cut(s)	569, 1092, 1250, 2000, 2208
XbaI	TCTAGA	1 cut(s)	1486
XceI	RCATGY	3 cut(s)	393, 889, 910
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2080
XhoI	CTCGAG	1 cut(s)	1667
XmiI	GTMKAC	2 cut(s)	285, 2219
XspI	CTAG	4 cut(s)	386, 558, 852, 1487
Zsp2I	ATGCAT	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.