Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

4964673 .. 4969705

Gene Structure 5033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1072200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGGCTAACCAAAACTCACTCCCTCTACACGAAAGAATAGAGCTTAGATACACTCTGCATAAAGTCATTGAGTTCATAATCCTCTTCCTCCTCCTTTCACTCCTCGTTCATCGTCTTCTCTCTTTCAACAACCATGGTTTCGCTTGGCTCATTGCTTTCCTGTGTGAACTCTCATTCACCTTAAATTGGGTCATCACCATAAGCAACAAATGGAACATTGTCGAATATAAAACCTACCCTGACCGCCTCTTACAACGGGTTTCTAAGCATGAACTCCCTCCGGTGGACATGTTTGTGACAACTGCAGACTCGAAGTTGGAACCACCTATTATTACCATAAACACTGTTTTGTCTCTGTTGGCTGTGGACTACCCAACAAACAAGCTAGCTTGCTATGTATCTGATGATGGCTGTTCTCCCCTCACCTTCTACTCGCTTTCGGAAGCATCAAAGTTTGCCATGCTTTGGGTTCCATTCTGCAAGAAATACAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCTCAAATAATAATGCCACATTTTCCAGCAATGACTCGAGTGAATTCAAGCAAGAATGGACATTATTGAAGGATGAGTACGAGCAGCTTAGCCGCAAAATTGAGGATGCGGTGGGAAAATCTATTCCATTCGATGTTAGCCAAGACTTTGCAGTTTTTTCAAATATAGAACGTAATAATCACCCAACAATTATCAAGGTTCTATGGGAGAACAAGGAAGATGTTTCAGATGGACCGCCACATTTGATTTATATATCAAGAGAAAAACGGCCAAAGCATCCCCATCATTCCAAAGCCGGGGCCATGAATGTTTTGACTAGAGTCTCTGGGTTAATGACCAATGCGCCCTTCATGCTGAACGTAGACTGCGATATGTTTGTCAACAACCCAAACATTATGTTGCATGCAATGTGTACGTTGCTCGGATCCGAGAACGAAACCAAAAATGCGTTTGCTCAGTTTCCACAGATCTTCTATGACGGACTCAAGGATGATCCATTCGGGAATCAGATGGTAGTTTTGTGGAAGTATGTGGGGCATGGAATAGCAGGAATTCAAGGCCCTATTTATGCGGGAACAGGATGTGTTCATAGACGAAAAGTTATCTATGGTCTATCCCCTACTGATACCAAAACCGGAGAAAGATACCCTAATATTGGTAGTGGAAATGTAGAAATGCTTAAAACTTTTGGGACTTCAGAAGAATTCACCAAATCAGCTGGTGATGCCTTGCAAGGGAATACAGAACGTGTAAACATGTCTTCGAAATCCGTTAAGGCTGCACACCGAGTTGGAGAATGTGAGTACGAATATGGCACCAATTGGGGTATAAAGGTGGGATGGAGGTATGGATCAACAACAGAAGATATCCTTACTGGCCTTTCAATCCATAACAAAGGTTGGAATTCTATTTTTTGTACACCAGACCCACCGGCGTTTCTAGGATGTGCACCTACAGGTGGTCCTGATTCCATGACCCAGCAGAAGAGATGGGCAACAGGCTTGCTTGAAATCCTGCTTAGTAAAAATTGTCCCATATTTGGCACTCTATTTGGAAATCTCCAATTTAGGATGTTCTTGGGTTACTTCTGGGTCCTTTCTTGGGGCCTACGTTGTATTCCTGAGCTGTGTTATGCTGCTCTGCCAGCTTATAGTATCATCACCAACACACATTTCTTACCCAAGGGCCAAGAACCAACCTACTATATACCCATAGCTCTCTTCGTCCTTTACCATATTTACACTTTATCGGAGTACCTTCAAACCGGTCTATCGATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAACTGTAATGAGTGCTTGGTTATTTGGATTTATTAGTGTCATACTCAAACTCTTAGGGATATCTGAGACAGCCTTTGAAGTTACCAGAAAAGATCAATCTACTTCAAGTGATGAAGGCTCTGAAGACACTGAAGCTGGCAGATTCACATTTGACAAGTCTCCAATTTTCGTGCCTCCCACAACTATTTTGCTGGTGCAGTTAACCGCGCTTGCTACTGCTTTCTTGGGCCTGCGGCCGCAAGATCAAGATGAGCTAGGGTCGGGCTCCTTGGAGGTTATAAGTAGTGTGTGGTTGGTGTTATGCCTCTGGCCATTTTTGAAAGGGTTGTTTGGTACTGGGAAGTATGGAATTCCCCTATCCACCATATCTAAGTCTGTTGGTTTCACGCTACTGTTCTACACCTTGTGTAGAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

750

Amino Acids

84.46

Weight (kDa)

6.79

Isoelectric Point (pI)

40.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	95 - 386	1.8e-86	Cellulose synthase
Cellulose_synt	PF03552	397 - 724	3.1e-60	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2111
AccB1I	GGYRCC	1 cut(s)	1334
AccB7I	CCANNNNNTGG	2 cut(s)	465, 1822
AccI	GTMKAC	1 cut(s)	882
AccII	CGCG	1 cut(s)	2039
AciI	CCGC	8 cut(s)	244, 613, 629, 755, 1091, 2037, 2065, 2069
AclWI	GGATC	5 cut(s)	939, 952, 1007, 1378, 1789
AcoI	YGGCCR	3 cut(s)	788, 2066, 2141
AcsI	RAATTY	5 cut(s)	563, 1071, 1223, 1423, 2181
AcuI	CTGAAG	3 cut(s)	1200, 1974, 1983
AdeI	CACNNNGTG	1 cut(s)	2238
AfaI	GTAC	6 cut(s)	599, 934, 1325, 1438, 1775, 2167
AflIII	ACRYGT	3 cut(s)	288, 1267, 1275
AgeI	ACCGGT	1 cut(s)	1784
AjuI	GAANNNNNNNTTGG	4 cut(s)	851, 883, 1676, 1708
Alw21I	GWGCWC	2 cut(s)	508, 1471
Alw26I	GTCTC	4 cut(s)	357, 847, 1892, 1995
Alw44I	GTGCAC	1 cut(s)	1467
AlwI	GGATC	5 cut(s)	939, 952, 1007, 1378, 1789
Ama87I	CYCGRG	1 cut(s)	556
AoxI	GGCC	9 cut(s)	788, 819, 1078, 1396, 1624, 1705, 2059, 2066, 2141
ApaLI	GTGCAC	1 cut(s)	1467
ApeKI	GCWGC	3 cut(s)	604, 1298, 1655
ApoI	RAATTY	5 cut(s)	563, 1071, 1223, 1423, 2181
AsiGI	ACCGGT	1 cut(s)	1784
AspLEI	GCGC	2 cut(s)	865, 2041
AspS9I	GGNCC	8 cut(s)	752, 819, 1079, 1481, 1612, 1624, 1705, 2059
AsuC2I	CCSGG	1 cut(s)	817
AsuHPI	GGTGA	7 cut(s)	169, 187, 415, 692, 1219, 1253, 1672
AsuII	TTCGAA	1 cut(s)	1283
AsuNHI	GCTAGC	1 cut(s)	385
AvaI	CYCGRG	1 cut(s)	556
AvaII	GGWCC	3 cut(s)	752, 1481, 1612
BaeGI	GKGCMC	1 cut(s)	1471
BalI	TGGCCA	1 cut(s)	2143
BamHI	GGATCC	1 cut(s)	944
BanI	GGYRCC	1 cut(s)	1334
BanII	GRGCYC	2 cut(s)	508, 2099
BarI	GAAGNNNNNNTAC	2 cut(s)	581, 613
BbsI	GAAGAC	3 cut(s)	107, 1272, 1962
Bbv12I	GWGCWC	2 cut(s)	508, 1471
BbvI	GCAGC	3 cut(s)	616, 1285, 1642
BccI	CCATC	6 cut(s)	401, 743, 810, 1024, 1353, 1503
BceAI	ACGGC	1 cut(s)	803
BcnI	CCSGG	1 cut(s)	817
BcoDI	GTCTC	4 cut(s)	357, 847, 1892, 1995
BfaI	CTAG	4 cut(s)	386, 837, 1460, 2087
BfmI	CTRYAG	2 cut(s)	303, 1473
BglII	AGATCT	1 cut(s)	987
BisI	GCNGC	6 cut(s)	605, 613, 1299, 1656, 2066, 2069
BlpI	GCTNAGC	1 cut(s)	608
BlsI	GCNGC	6 cut(s)	606, 614, 1300, 1657, 2067, 2070
Bme1390I	CCNGG	1 cut(s)	817
Bme18I	GGWCC	3 cut(s)	752, 1481, 1612
BmeT110I	CYCGRG	1 cut(s)	556
BmgT120I	GGNCC	8 cut(s)	752, 819, 1079, 1481, 1612, 1624, 1705, 2059
BmiI	GGNNCC	8 cut(s)	321, 471, 820, 946, 1336, 1613, 1625, 2098
BmrFI	CCNGG	1 cut(s)	817
BmrI	ACTGGG	1 cut(s)	2178
BmsI	GCATC	4 cut(s)	455, 616, 805, 1234
BmtI	GCTAGC	1 cut(s)	389
BmuI	ACTGGG	1 cut(s)	2178
BoxI	GACNNNNGTC	1 cut(s)	839
BpiI	GAAGAC	3 cut(s)	107, 1272, 1962
Bpu10I	CCTNAGC	1 cut(s)	1641
Bpu1102I	GCTNAGC	1 cut(s)	608
Bpu14I	TTCGAA	1 cut(s)	1283
BpuEI	CTTGAG	1 cut(s)	989
BpuMI	CCSGG	1 cut(s)	817
Bsa29I	ATCGAT	1 cut(s)	1793
BsaJI	CCNNGG	4 cut(s)	133, 816, 1701, 2100
BsaWI	WCCGGW	3 cut(s)	280, 1154, 1784
Bse118I	RCCGGY	2 cut(s)	1450, 1784
Bse1I	ACTGG	2 cut(s)	1399, 2173
Bse3DI	GCAATG	3 cut(s)	150, 556, 933
BseCI	ATCGAT	1 cut(s)	1793
BseDI	CCNNGG	4 cut(s)	133, 816, 1701, 2100
BseGI	GGATG	8 cut(s)	598, 631, 796, 1015, 1106, 1364, 1469, 1596
BseMI	GCAATG	3 cut(s)	150, 556, 933
BseMII	CTCAG	3 cut(s)	989, 1632, 1887
BseNI	ACTGG	2 cut(s)	1399, 2173
BseRI	GAGGAG	2 cut(s)	80, 92
BseSI	GKGCMC	1 cut(s)	1471
BseX3I	CGGCCG	1 cut(s)	2066
BseXI	GCAGC	3 cut(s)	616, 1285, 1642
BseYI	CCCAGC	1 cut(s)	1497
BsgI	GTGCAG	2 cut(s)	1284, 2048
Bsh1236I	CGCG	1 cut(s)	2039
Bsh1285I	CGRYCG	1 cut(s)	2069
BshFI	GGCC	9 cut(s)	790, 821, 1080, 1398, 1626, 1707, 2061, 2068, 2143
BshNI	GGYRCC	1 cut(s)	1334
BshTI	ACCGGT	1 cut(s)	1784
BshVI	ATCGAT	1 cut(s)	1793
BsiEI	CGRYCG	1 cut(s)	2069
BsiHKAI	GWGCWC	2 cut(s)	508, 1471
BsiHKCI	CYCGRG	1 cut(s)	556
BsiSI	CCGG	5 cut(s)	281, 816, 1155, 1451, 1785
BslFI	GGGAC	2 cut(s)	1225, 1536
BsmAI	GTCTC	4 cut(s)	357, 847, 1892, 1995
BsmFI	GGGAC	2 cut(s)	1225, 1536
BsnI	GGCC	9 cut(s)	790, 821, 1080, 1398, 1626, 1707, 2061, 2068, 2143
BsoBI	CYCGRG	1 cut(s)	556
Bsp119I	TTCGAA	1 cut(s)	1283
Bsp1286I	GDGCHC	3 cut(s)	508, 1471, 2099
Bsp1407I	TGTACA	1 cut(s)	1436
Bsp143I	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
Bsp1720I	GCTNAGC	1 cut(s)	608
Bsp19I	CCATGG	1 cut(s)	133
BspACI	CCGC	8 cut(s)	244, 613, 629, 755, 1091, 2037, 2065, 2069
BspANI	GGCC	9 cut(s)	790, 821, 1080, 1398, 1626, 1707, 2061, 2068, 2143
BspCNI	CTCAG	3 cut(s)	988, 1633, 1888
BspDI	ATCGAT	1 cut(s)	1793
BspFNI	CGCG	1 cut(s)	2039
BspLI	GGNNCC	8 cut(s)	321, 471, 820, 946, 1336, 1613, 1625, 2098
BspMAI	CTGCAG	1 cut(s)	307
BspOI	GCTAGC	1 cut(s)	389
BspPI	GGATC	5 cut(s)	939, 952, 1007, 1378, 1789
BspT104I	TTCGAA	1 cut(s)	1283
BspT107I	GGYRCC	1 cut(s)	1334
BsrDI	GCAATG	3 cut(s)	150, 556, 933
BsrFI	RCCGGY	2 cut(s)	1450, 1784
BsrGI	TGTACA	1 cut(s)	1436
BsrI	ACTGG	2 cut(s)	1399, 2173
BssAI	RCCGGY	2 cut(s)	1450, 1784
BssECI	CCNNGG	4 cut(s)	133, 816, 1701, 2100
BssMI	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
BssT1I	CCWWGG	3 cut(s)	133, 1701, 2100
Bst4CI	ACNGT	3 cut(s)	346, 1837, 2226
Bst6I	CTCTTC	3 cut(s)	89, 1499, 1745
BstAUI	TGTACA	1 cut(s)	1436
BstBI	TTCGAA	1 cut(s)	1283
BstC8I	GCNNGC	8 cut(s)	387, 391, 924, 1523, 1665, 1969, 2043, 2063
BstDEI	CTNAG	9 cut(s)	44, 264, 608, 975, 1538, 1641, 1885, 1896, 2202
BstDSI	CCRYGG	1 cut(s)	133
BstF5I	GGATG	8 cut(s)	598, 631, 796, 1015, 1106, 1364, 1469, 1596
BstFNI	CGCG	1 cut(s)	2039
BstHHI	GCGC	2 cut(s)	865, 2041
BstKTI	GATC	7 cut(s)	947, 990, 1015, 1373, 1797, 1927, 2077
BstMAI	GTCTC	4 cut(s)	357, 847, 1892, 1995
BstMBI	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
BstMCI	CGRYCG	1 cut(s)	2069
BstMWI	GCNNNNNNNGC	3 cut(s)	871, 1244, 1664
BstNSI	RCATGY	3 cut(s)	292, 926, 1279
BstPAI	GACNNNNGTC	1 cut(s)	839
BstSCI	CCNGG	1 cut(s)	815
BstSFI	CTRYAG	2 cut(s)	303, 1473
BstSLI	GKGCMC	1 cut(s)	1471
BstUI	CGCG	1 cut(s)	2039
BstV1I	GCAGC	3 cut(s)	616, 1285, 1642
BstV2I	GAAGAC	3 cut(s)	107, 1272, 1962
BstX2I	RGATCY	2 cut(s)	944, 987
BstYI	RGATCY	2 cut(s)	944, 987
BstZI	CGGCCG	1 cut(s)	2066
Bsu15I	ATCGAT	1 cut(s)	1793
BsuRI	GGCC	9 cut(s)	790, 821, 1080, 1398, 1626, 1707, 2061, 2068, 2143
BsuTUI	ATCGAT	1 cut(s)	1793
BtgI	CCRYGG	1 cut(s)	133
BtsCI	GGATG	8 cut(s)	598, 631, 796, 1015, 1106, 1364, 1469, 1596
BtsIMutI	CAGTG	2 cut(s)	342, 1959
Cac8I	GCNNGC	8 cut(s)	387, 391, 924, 1523, 1665, 1969, 2043, 2063
CciNI	GCGGCCGC	1 cut(s)	2066
CfoI	GCGC	2 cut(s)	865, 2041
Cfr10I	RCCGGY	2 cut(s)	1450, 1784
Cfr13I	GGNCC	8 cut(s)	752, 819, 1079, 1481, 1612, 1624, 1705, 2059
ClaI	ATCGAT	1 cut(s)	1793
Csp6I	GTAC	6 cut(s)	598, 933, 1324, 1437, 1774, 2166
CspAI	ACCGGT	1 cut(s)	1784
CviQI	GTAC	6 cut(s)	598, 933, 1324, 1437, 1774, 2166
DdeI	CTNAG	9 cut(s)	44, 264, 608, 975, 1538, 1641, 1885, 1896, 2202
DpnI	GATC	7 cut(s)	946, 989, 1014, 1372, 1796, 1926, 2076
DpnII	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
DraIII	CACNNNGTG	1 cut(s)	2238
EaeI	YGGCCR	3 cut(s)	788, 2066, 2141
EagI	CGGCCG	1 cut(s)	2066
Eam1104I	CTCTTC	3 cut(s)	89, 1499, 1745
EarI	CTCTTC	3 cut(s)	89, 1499, 1745
Ecl136II	GAGCTC	1 cut(s)	506
EclXI	CGGCCG	1 cut(s)	2066
Eco130I	CCWWGG	3 cut(s)	133, 1701, 2100
Eco24I	GRGCYC	2 cut(s)	508, 2099
Eco32I	GATATC	2 cut(s)	1387, 1893
Eco47I	GGWCC	3 cut(s)	752, 1481, 1612
Eco52I	CGGCCG	1 cut(s)	2066
Eco53kI	GAGCTC	1 cut(s)	506
Eco57I	CTGAAG	3 cut(s)	1200, 1974, 1983
Eco88I	CYCGRG	1 cut(s)	556
EcoICRI	GAGCTC	1 cut(s)	506
EcoO109I	RGGNCCY	3 cut(s)	1079, 1612, 1624
EcoRI	GAATTC	5 cut(s)	563, 1071, 1223, 1423, 2181
EcoRV	GATATC	2 cut(s)	1387, 1893
EcoT14I	CCWWGG	3 cut(s)	133, 1701, 2100
EcoT38I	GRGCYC	2 cut(s)	508, 2099
ErhI	CCWWGG	3 cut(s)	133, 1701, 2100
FalI	AAGNNNNNCTT	2 cut(s)	1374, 1406
FaqI	GGGAC	2 cut(s)	1225, 1536
FauI	CCCGC	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	882
Fnu4HI	GCNGC	6 cut(s)	605, 613, 1299, 1656, 2066, 2069
FokI	GGATG	8 cut(s)	605, 638, 783, 1022, 1113, 1371, 1476, 1603
FriOI	GRGCYC	2 cut(s)	508, 2099
Fsp4HI	GCNGC	6 cut(s)	605, 613, 1299, 1656, 2066, 2069
FspBI	CTAG	4 cut(s)	386, 837, 1460, 2087
GlaI	GCGC	2 cut(s)	864, 2040
GluI	GCNGC	6 cut(s)	605, 613, 1299, 1656, 2066, 2069
GsaI	CCCAGC	1 cut(s)	1501
HaeIII	GGCC	9 cut(s)	790, 821, 1080, 1398, 1626, 1707, 2061, 2068, 2143
HapII	CCGG	5 cut(s)	281, 816, 1155, 1451, 1785
HhaI	GCGC	2 cut(s)	865, 2041
Hin6I	GCGC	2 cut(s)	863, 2039
HinP1I	GCGC	2 cut(s)	863, 2039
HincII	GTYRAC	2 cut(s)	901, 2034
HindII	GTYRAC	2 cut(s)	901, 2034
HinfI	GANTC	7 cut(s)	308, 554, 840, 1002, 1024, 1487, 1974
HpaI	GTTAAC	1 cut(s)	2034
HpaII	CCGG	5 cut(s)	281, 816, 1155, 1451, 1785
HphI	GGTGA	7 cut(s)	169, 187, 415, 692, 1219, 1253, 1672
Hpy188III	TCNNGA	5 cut(s)	777, 1021, 1484, 1640, 2078
HpyAV	CCTTC	5 cut(s)	436, 583, 877, 1787, 1940
HpyCH4III	ACNGT	3 cut(s)	346, 1837, 2226
HpyCH4IV	ACGT	5 cut(s)	691, 879, 935, 1267, 1630
HpyF10VI	GCNNNNNNNGC	3 cut(s)	871, 1244, 1664
HpyF3I	CTNAG	9 cut(s)	44, 264, 608, 975, 1538, 1641, 1885, 1896, 2202
HpySE526I	ACGT	5 cut(s)	691, 879, 935, 1267, 1630
HspAI	GCGC	2 cut(s)	863, 2039
KspAI	GTTAAC	1 cut(s)	2034
Kzo9I	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
LmnI	GCTCC	2 cut(s)	511, 2102
Lsp1109I	GCAGC	3 cut(s)	616, 1285, 1642
LweI	GCATC	4 cut(s)	455, 616, 805, 1234
MaeI	CTAG	4 cut(s)	386, 837, 1460, 2087
MaeII	ACGT	5 cut(s)	691, 879, 935, 1267, 1630
MaeIII	GTNAC	3 cut(s)	295, 1601, 1912
MalI	GATC	7 cut(s)	946, 989, 1014, 1372, 1796, 1926, 2076
MboI	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
MfeI	CAATTG	1 cut(s)	1339
MflI	RGATCY	2 cut(s)	944, 987
MhlI	GDGCHC	3 cut(s)	508, 1471, 2099
MlsI	TGGCCA	1 cut(s)	2143
MluNI	TGGCCA	1 cut(s)	2143
MlyI	GAGTC	4 cut(s)	302, 548, 849, 996
MmeI	TCCRAC	3 cut(s)	297, 1291, 1400
Mox20I	TGGCCA	1 cut(s)	2143
MscI	TGGCCA	1 cut(s)	2143
MseI	TTAA	5 cut(s)	182, 851, 1200, 1293, 2033
MslI	CAYNNNNRTG	1 cut(s)	293
Msp20I	TGGCCA	1 cut(s)	2143
MspA1I	CMGCKG	1 cut(s)	1238
MspI	CCGG	5 cut(s)	281, 816, 1155, 1451, 1785
MspR9I	CCNGG	1 cut(s)	817
MunI	CAATTG	1 cut(s)	1339
MvnI	CGCG	1 cut(s)	2039
MwoI	GCNNNNNNNGC	3 cut(s)	871, 1244, 1664
NciI	CCSGG	1 cut(s)	817
NcoI	CCATGG	1 cut(s)	133
NdeII	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
NheI	GCTAGC	1 cut(s)	385
NlaIV	GGNNCC	8 cut(s)	321, 471, 820, 946, 1336, 1613, 1625, 2098
NmuCI	GTSAC	1 cut(s)	295
NotI	GCGGCCGC	1 cut(s)	2066
NspI	RCATGY	3 cut(s)	292, 926, 1279
NspV	TTCGAA	1 cut(s)	1283
PaeI	GCATGC	1 cut(s)	926
PaeR7I	CTCGAG	1 cut(s)	556
PciI	ACATGT	2 cut(s)	288, 1275
PcsI	WCGNNNNNNNCGW	1 cut(s)	885
PfeI	GAWTC	3 cut(s)	1024, 1487, 1974
PflMI	CCANNNNNTGG	2 cut(s)	465, 1822
PinAI	ACCGGT	1 cut(s)	1784
PkrI	GCNGC	6 cut(s)	606, 614, 1300, 1657, 2067, 2070
PleI	GAGTC	4 cut(s)	302, 548, 848, 996
PpsI	GAGTC	4 cut(s)	302, 548, 848, 996
PpuMI	RGGWCCY	1 cut(s)	1612
PscI	ACATGT	2 cut(s)	288, 1275
PshAI	GACNNNNGTC	1 cut(s)	839
PsiI	TTATAA	1 cut(s)	2111
Psp124BI	GAGCTC	1 cut(s)	508
Psp5II	RGGWCCY	1 cut(s)	1612
PspFI	CCCAGC	1 cut(s)	1497
PspN4I	GGNNCC	8 cut(s)	321, 471, 820, 946, 1336, 1613, 1625, 2098
PspPI	GGNCC	8 cut(s)	752, 819, 1079, 1481, 1612, 1624, 1705, 2059
PspPPI	RGGWCCY	1 cut(s)	1612
PspXI	VCTCGAGB	1 cut(s)	556
PstI	CTGCAG	1 cut(s)	307
PsuI	RGATCY	2 cut(s)	944, 987
PvuII	CAGCTG	1 cut(s)	1238
RsaI	GTAC	6 cut(s)	599, 934, 1325, 1438, 1775, 2167
RsaNI	GTAC	6 cut(s)	598, 933, 1324, 1437, 1774, 2166
RseI	CAYNNNNRTG	1 cut(s)	293
SacI	GAGCTC	1 cut(s)	508
SaqAI	TTAA	5 cut(s)	182, 851, 1200, 1293, 2033
SatI	GCNGC	6 cut(s)	605, 613, 1299, 1656, 2066, 2069
Sau3AI	GATC	7 cut(s)	944, 987, 1012, 1370, 1794, 1924, 2074
Sau96I	GGNCC	8 cut(s)	752, 819, 1079, 1481, 1612, 1624, 1705, 2059
SchI	GAGTC	4 cut(s)	302, 548, 849, 996
ScrFI	CCNGG	1 cut(s)	817
SduI	GDGCHC	3 cut(s)	508, 1471, 2099
SfaNI	GCATC	4 cut(s)	455, 616, 805, 1234
SfcI	CTRYAG	2 cut(s)	303, 1473
Sfr274I	CTCGAG	1 cut(s)	556
SfuI	TTCGAA	1 cut(s)	1283
SgrAI	CRCCGGYG	1 cut(s)	1450
SinI	GGWCC	3 cut(s)	752, 1481, 1612
SlaI	CTCGAG	1 cut(s)	556
SmiMI	CAYNNNNRTG	1 cut(s)	293
SmlI	CTYRAG	2 cut(s)	556, 1004
SmoI	CTYRAG	2 cut(s)	556, 1004
SphI	GCATGC	1 cut(s)	926
SsiI	CCGC	8 cut(s)	244, 613, 629, 755, 1091, 2037, 2065, 2069
SspI	AATATT	1 cut(s)	1174
SspMI	CTAG	4 cut(s)	386, 837, 1460, 2087
SstI	GAGCTC	1 cut(s)	508
StyD4I	CCNGG	1 cut(s)	815
StyI	CCWWGG	3 cut(s)	133, 1701, 2100
TaaI	ACNGT	3 cut(s)	346, 1837, 2226
TaiI	ACGT	5 cut(s)	694, 882, 938, 1270, 1633
TaqI	TCGA	6 cut(s)	222, 311, 557, 651, 1283, 1793
TatI	WGTACW	1 cut(s)	1436
TauI	GCSGC	3 cut(s)	615, 2068, 2071
TfiI	GAWTC	3 cut(s)	1024, 1487, 1974
Tru1I	TTAA	5 cut(s)	182, 851, 1200, 1293, 2033
Tru9I	TTAA	5 cut(s)	182, 851, 1200, 1293, 2033
TscAI	CASTG	2 cut(s)	349, 1966
TseFI	GTSAC	1 cut(s)	295
TseI	GCWGC	3 cut(s)	604, 1298, 1655
Tsp45I	GTSAC	1 cut(s)	295
TspDTI	ATGAA	7 cut(s)	64, 98, 285, 839, 859, 1097, 1959
TspGWI	ACGGA	2 cut(s)	1014, 1279
TspRI	CASTG	2 cut(s)	349, 1966
Van91I	CCANNNNNTGG	2 cut(s)	465, 1822
VneI	GTGCAC	1 cut(s)	1467
VpaK11BI	GGWCC	3 cut(s)	752, 1481, 1612
XapI	RAATTY	5 cut(s)	563, 1071, 1223, 1423, 2181
XceI	RCATGY	3 cut(s)	292, 926, 1279
XhoI	CTCGAG	1 cut(s)	556
XmiI	GTMKAC	1 cut(s)	882
XspI	CTAG	4 cut(s)	386, 837, 1460, 2087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.