Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

76619046 .. 76625605

Gene Structure 6560 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG538200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGTTAGACATCATCGGAAAAAACAACCGGGTTGAGCACAGAAACACACTGCATAAAATCATGGAGTTTATAATCCTCTTCCTCCTCCTTTCACTCCTTGTTTATCGTCTCCTCTCTTTCAACAACCATGGTTTATCCTGGTCCATCGCATTCCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATCAGCAACAAATGGATTCTTGTTGACCATAAACCATACCCCGACCGCCTATTGCAACGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACAACAGCAGACCCAGAGCTTGAACCACCTATCATTACCGTAAACACTGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAAACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCAAAGTTTGCTAGGATTTGGATTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCACCAATAATTCCACGCTTTCTGGAAATAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGATAGTGAAGGATGAATATGAGCAACTTAGCAGCAAAATAGAGGATGCGGTGTGCAAATCAATCAATCCATCTGATATTATCGAATGTGACTTTTCAGTGTTTTCAAATGTACAGCGTAATGATCATCCAACAATAATCAAGGTTGTATGGGAGAACAAAGAAGCACATTCGAATCGTCCAGTGCCACATTTAGTTTATATATCCAGAGAAAAACGGGCAAAGCACCCACATCATGCCAAAGCCGGGGCCATGAATGTTCTGACTAGAGTCTCTGGATTGATGACCAATGCTCCGTACATGCTAAACGTGGACTGTGACATGTTCGTCAACAGCCCAAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCGTTTGTTCAGTGTCCTCAAGTCTTCTGTGACAGTCTAAAGGATGATCCTTTCGGAAATCAGATGATAGTTTGGTGGAAGTATGTAGGACAAGGAGTTTCAGGAATTCAGGGACCTTTTTATTCCGGAACAGGATGTGTTCATAGACGAAAAGTCATCTATGGTCTATCCCCCAATTATGTGAAAGTTGGAGAAACAAATGCAATAAGCATGATGAACGGTACGTTTGGTAAGGAATTTACCAAATCAGCTGTTGATGCTTTGAACGGGAAGGCAGCATGTCCTGACATGCTTACAGAAACTATTGAGGCTGCATACCAAGTTACTGGTGTTGGATATGAGTATGGCACACACTGGGGCAAAAAGGTGGGATGGATGTATGGATCCACAGTTGAAGATATCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTGTTTATGCACCAGACCCACCAGCCTTTCTAGGATTCGCGCCTACCGGTGGGCCTGCTTCAATGACCCAACAAAAAAGGTGGGCCACCGGCCTGTTTGAAATCCTCCTCAGTAAAAACTGCCCCATATTTGGTACTCTCTTTGCAAACCTCCAGTTCAGGCAGTGCTTGGGCTACTTCTGTATCCTTACATGGGGGCTACGCTCAGTTCTCGAGTTAAACTATGCTGCTTTGCCAGCCTATAGTATCATCACCAACTCAAACTTCTTGCCGAAGGGCCAAGAACCGGCTTACTATATACTCGTAGCTTTGTTTCTGATCTACACTATGTACACTTCATCAGAGTACCTTAGAACCGGTCAATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAATCTCAATGAGTGCATGGCTTTTTGGATTTCTTAGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTCGAGGTAACACGAAAAGACCAATCTACATCAAGCGATGAAGGCACTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCATACCTCCCACAGCAATGTTGTTTCTGCAATTAACAGCACTGGCCACCGCTTTGTTGGGGCTTCAACCACCAGCCCGTGATGGGGTGGAATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTGGTGGTATGCTTATTACCATTTTTGAAAGGTCTGTTTGGATCAGGAAAATATGGAATTCCTCTGTCTACCATATTTAAGTCTGCTGGTCTTGCACTACTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

745

Amino Acids

83.69

Weight (kDa)

7.77

Isoelectric Point (pI)

37.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	93 - 402	9.7e-87	Cellulose synthase
Cellulose_synt	PF03552	420 - 721	2.2e-50	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	71
AasI	GACNNNNNNGTC	1 cut(s)	905
AccB1I	GGYRCC	1 cut(s)	253
AccB7I	CCANNNNNTGG	1 cut(s)	1810
AccI	GTMKAC	2 cut(s)	279, 2180
AccII	CGCG	1 cut(s)	1457
AccIII	TCCGGA	1 cut(s)	1100
AciI	CCGC	3 cut(s)	238, 629, 2037
AclWI	GGATC	6 cut(s)	961, 1016, 1353, 1366, 1407, 2161
AcoI	YGGCCR	1 cut(s)	2031
AcsI	RAATTY	5 cut(s)	563, 1080, 1211, 1961, 2169
AcuI	CTGAAG	3 cut(s)	160, 1962, 1971
AdeI	CACNNNGTG	1 cut(s)	2226
AfaI	GTAC	7 cut(s)	482, 693, 878, 1198, 1552, 1748, 1763
AfiI	CCNNNNNNNGG	9 cut(s)	180, 825, 1466, 1547, 1609, 1702, 1810, 2070, 2071
AflIII	ACRYGT	1 cut(s)	900
AgeI	ACCGGT	2 cut(s)	1463, 1772
AhdI	GACNNNNNGTC	1 cut(s)	1127
AjnI	CCWGG	1 cut(s)	137
AjuI	GAANNNNNNNTTGG	2 cut(s)	1664, 1696
AluBI	AGCT	7 cut(s)	163, 268, 310, 500, 555, 1226, 1724
AluI	AGCT	7 cut(s)	163, 268, 310, 500, 555, 1226, 1724
Alw21I	GWGCWC	3 cut(s)	39, 165, 502
Alw26I	GTCTC	5 cut(s)	113, 351, 856, 1880, 2087
AlwI	GGATC	6 cut(s)	961, 1016, 1353, 1366, 1407, 2161
Ama87I	CYCGRG	1 cut(s)	1628
Aor13HI	TCCGGA	1 cut(s)	1100
AoxI	GGCC	6 cut(s)	828, 1469, 1500, 1507, 1693, 2031
ApeKI	GCWGC	4 cut(s)	612, 1250, 1286, 1643
ApoI	RAATTY	5 cut(s)	563, 1080, 1211, 1961, 2169
AsiGI	ACCGGT	2 cut(s)	1463, 1772
AspLEI	GCGC	1 cut(s)	1459
AspS9I	GGNCC	6 cut(s)	141, 828, 1088, 1469, 1500, 1693
AsuC2I	CCSGG	2 cut(s)	29, 826
AsuHPI	GGTGA	5 cut(s)	181, 409, 508, 1660, 1957
AsuII	TTCGAA	1 cut(s)	752
AvaI	CYCGRG	1 cut(s)	1628
AvaII	GGWCC	2 cut(s)	141, 1088
AxyI	CCTNAGG	1 cut(s)	258
BaeI	ACNNNNGTAYC	2 cut(s)	1582, 1615
BalI	TGGCCA	1 cut(s)	2033
BamHI	GGATCC	1 cut(s)	1358
BanI	GGYRCC	1 cut(s)	253
BanII	GRGCYC	2 cut(s)	165, 502
BbsI	GAAGAC	2 cut(s)	991, 1885
Bbv12I	GWGCWC	3 cut(s)	39, 165, 502
BbvI	GCAGC	4 cut(s)	624, 1262, 1273, 1630
BccI	CCATC	6 cut(s)	152, 200, 395, 658, 1341, 2063
BciT130I	CCWGG	1 cut(s)	139
BciVI	GTATCC	1 cut(s)	1610
BclI	TGATCA	1 cut(s)	703
BcnI	CCSGG	2 cut(s)	29, 826
BcoDI	GTCTC	5 cut(s)	113, 351, 856, 1880, 2087
BfaI	CTAG	4 cut(s)	380, 453, 846, 1448
BfmI	CTRYAG	1 cut(s)	1657
BfuI	GTATCC	1 cut(s)	1610
BisI	GCNGC	4 cut(s)	613, 1251, 1287, 1644
BlsI	GCNGC	4 cut(s)	614, 1252, 1288, 1645
Bme1390I	CCNGG	3 cut(s)	29, 139, 826
Bme18I	GGWCC	2 cut(s)	141, 1088
BmeRI	GACNNNNNGTC	1 cut(s)	1127
BmeT110I	CYCGRG	1 cut(s)	1628
BmgT120I	GGNCC	6 cut(s)	141, 828, 1088, 1469, 1500, 1693
BmiI	GGNNCC	4 cut(s)	255, 829, 1089, 1360
BmrFI	CCNGG	3 cut(s)	29, 139, 826
BmrI	ACTGGG	3 cut(s)	1339, 1392, 1976
BmsI	GCATC	3 cut(s)	449, 616, 1222
BmuI	ACTGGG	3 cut(s)	1339, 1392, 1976
BoxI	GACNNNNGTC	1 cut(s)	848
BpiI	GAAGAC	2 cut(s)	991, 1885
BpmI	CTGGAG	1 cut(s)	1553
Bpu14I	TTCGAA	1 cut(s)	752
BpuEI	CTTGAG	1 cut(s)	978
BpuMI	CCSGG	2 cut(s)	29, 826
BsaI	GGTCTC	1 cut(s)	2087
BsaJI	CCNNGG	2 cut(s)	127, 825
BsaWI	WCCGGW	3 cut(s)	1100, 1463, 1772
BsaXI	ACNNNNNCTCC	4 cut(s)	856, 886, 2084, 2114
Bsc4I	CCNNNNNNNGG	9 cut(s)	180, 825, 1466, 1547, 1609, 1702, 1810, 2070, 2071
Bse118I	RCCGGY	4 cut(s)	1463, 1505, 1702, 1772
Bse1I	ACTGG	8 cut(s)	761, 1306, 1334, 1387, 1570, 1975, 1982, 2034
Bse21I	CCTNAGG	1 cut(s)	258
Bse3DI	GCAATG	2 cut(s)	942, 2010
BseAI	TCCGGA	1 cut(s)	1100
BseBI	CCWGG	1 cut(s)	139
BseDI	CCNNGG	2 cut(s)	127, 825
BseGI	GGATG	8 cut(s)	268, 598, 631, 706, 1024, 1115, 1352, 1356
BseLI	CCNNNNNNNGG	9 cut(s)	180, 825, 1466, 1547, 1609, 1702, 1810, 2070, 2071
BseMI	GCAATG	2 cut(s)	942, 2010
BseMII	CTCAG	2 cut(s)	1540, 1635
BseNI	ACTGG	8 cut(s)	761, 1306, 1334, 1387, 1570, 1975, 1982, 2034
BseRI	GAGGAG	3 cut(s)	74, 101, 1514
BseXI	GCAGC	4 cut(s)	624, 1262, 1273, 1630
BsgI	GTGCAG	1 cut(s)	2122
Bsh1236I	CGCG	1 cut(s)	1457
Bsh1285I	CGRYCG	1 cut(s)	238
BshFI	GGCC	6 cut(s)	830, 1471, 1502, 1509, 1695, 2033
BshNI	GGYRCC	1 cut(s)	253
BshTI	ACCGGT	2 cut(s)	1463, 1772
BsiEI	CGRYCG	1 cut(s)	238
BsiHKAI	GWGCWC	3 cut(s)	39, 165, 502
BsiHKCI	CYCGRG	1 cut(s)	1628
BsiSI	CCGG	8 cut(s)	28, 825, 1101, 1464, 1506, 1703, 1773, 1956
BslFI	GGGAC	2 cut(s)	1101, 1963
BslI	CCNNNNNNNGG	9 cut(s)	180, 825, 1466, 1547, 1609, 1702, 1810, 2070, 2071
BsmAI	GTCTC	5 cut(s)	113, 351, 856, 1880, 2087
BsmBI	CGTCTC	1 cut(s)	113
BsmFI	GGGAC	2 cut(s)	1101, 1963
BsmI	GAATGC	1 cut(s)	149
BsnI	GGCC	6 cut(s)	830, 1471, 1502, 1509, 1695, 2033
Bso31I	GGTCTC	1 cut(s)	2087
BsoBI	CYCGRG	1 cut(s)	1628
Bsp119I	TTCGAA	1 cut(s)	752
Bsp1286I	GDGCHC	3 cut(s)	39, 165, 502
Bsp13I	TCCGGA	1 cut(s)	1100
Bsp1407I	TGTACA	2 cut(s)	691, 1746
Bsp143I	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
Bsp19I	CCATGG	1 cut(s)	127
BspACI	CCGC	3 cut(s)	238, 629, 2037
BspANI	GGCC	6 cut(s)	830, 1471, 1502, 1509, 1695, 2033
BspCNI	CTCAG	2 cut(s)	1539, 1634
BspEI	TCCGGA	1 cut(s)	1100
BspFNI	CGCG	1 cut(s)	1457
BspLI	GGNNCC	4 cut(s)	255, 829, 1089, 1360
BspPI	GGATC	6 cut(s)	961, 1016, 1353, 1366, 1407, 2161
BspT104I	TTCGAA	1 cut(s)	752
BspT107I	GGYRCC	1 cut(s)	253
BspTNI	GGTCTC	1 cut(s)	2087
BsrDI	GCAATG	2 cut(s)	942, 2010
BsrFI	RCCGGY	4 cut(s)	1463, 1505, 1702, 1772
BsrGI	TGTACA	2 cut(s)	691, 1746
BsrI	ACTGG	8 cut(s)	761, 1306, 1334, 1387, 1570, 1975, 1982, 2034
BssAI	RCCGGY	4 cut(s)	1463, 1505, 1702, 1772
BssECI	CCNNGG	2 cut(s)	127, 825
BssMI	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
BssT1I	CCWWGG	1 cut(s)	127
Bst2UI	CCWGG	1 cut(s)	139
Bst4CI	ACNGT	7 cut(s)	331, 340, 896, 1010, 1196, 1366, 1891
Bst6I	CTCTTC	2 cut(s)	83, 2219
BstAPI	GCANNNNNTGC	1 cut(s)	253
BstAUI	TGTACA	2 cut(s)	691, 1746
BstBI	TTCGAA	1 cut(s)	752
BstC8I	GCNNGC	4 cut(s)	161, 385, 1473, 1653
BstDEI	CTNAG	6 cut(s)	258, 608, 1526, 1621, 1766, 1853
BstDSI	CCRYGG	1 cut(s)	127
BstF5I	GGATG	8 cut(s)	268, 598, 631, 706, 1024, 1115, 1352, 1356
BstFNI	CGCG	1 cut(s)	1457
BstHHI	GCGC	1 cut(s)	1459
BstKTI	GATC	7 cut(s)	706, 956, 1024, 1361, 1415, 1737, 2156
BstMAI	GTCTC	5 cut(s)	113, 351, 856, 1880, 2087
BstMBI	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
BstMCI	CGRYCG	1 cut(s)	238
BstMWI	GCNNNNNNNGC	5 cut(s)	253, 1232, 1652, 1935, 2204
BstNI	CCWGG	1 cut(s)	139
BstNSI	RCATGY	5 cut(s)	387, 883, 904, 1257, 1267
BstPAI	GACNNNNGTC	1 cut(s)	848
BstSCI	CCNGG	3 cut(s)	27, 137, 824
BstSFI	CTRYAG	1 cut(s)	1657
BstUI	CGCG	1 cut(s)	1457
BstV1I	GCAGC	4 cut(s)	624, 1262, 1273, 1630
BstV2I	GAAGAC	2 cut(s)	991, 1885
BstX2I	RGATCY	2 cut(s)	1358, 1412
BstXI	CCANNNNNNTGG	1 cut(s)	1301
BstYI	RGATCY	2 cut(s)	1358, 1412
Bsu36I	CCTNAGG	1 cut(s)	258
BsuI	GTATCC	1 cut(s)	1610
BsuRI	GGCC	6 cut(s)	830, 1471, 1502, 1509, 1695, 2033
BtgI	CCRYGG	1 cut(s)	127
BtgZI	GCGATG	2 cut(s)	130, 1944
BtsCI	GGATG	8 cut(s)	268, 598, 631, 706, 1024, 1115, 1352, 1356
BtsI	GCAGTG	3 cut(s)	47, 1586, 2110
Cac8I	GCNNGC	4 cut(s)	161, 385, 1473, 1653
CfoI	GCGC	1 cut(s)	1459
Cfr10I	RCCGGY	4 cut(s)	1463, 1505, 1702, 1772
Cfr13I	GGNCC	6 cut(s)	141, 828, 1088, 1469, 1500, 1693
Csp6I	GTAC	7 cut(s)	481, 692, 877, 1197, 1551, 1747, 1762
CspAI	ACCGGT	2 cut(s)	1463, 1772
CspCI	CAANNNNNGTGG	2 cut(s)	1478, 1513
CviQI	GTAC	7 cut(s)	481, 692, 877, 1197, 1551, 1747, 1762
DdeI	CTNAG	6 cut(s)	258, 608, 1526, 1621, 1766, 1853
DpnI	GATC	7 cut(s)	705, 955, 1023, 1360, 1414, 1736, 2155
DpnII	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
DraIII	CACNNNGTG	1 cut(s)	2226
DrdI	GACNNNNNNGTC	1 cut(s)	905
DriI	GACNNNNNGTC	1 cut(s)	1127
DseDI	GACNNNNNNGTC	1 cut(s)	905
EaeI	YGGCCR	1 cut(s)	2031
Eam1104I	CTCTTC	2 cut(s)	83, 2219
Eam1105I	GACNNNNNGTC	1 cut(s)	1127
EarI	CTCTTC	2 cut(s)	83, 2219
Ecl136II	GAGCTC	2 cut(s)	163, 500
Eco130I	CCWWGG	1 cut(s)	127
Eco24I	GRGCYC	2 cut(s)	165, 502
Eco31I	GGTCTC	1 cut(s)	2087
Eco32I	GATATC	1 cut(s)	1375
Eco47I	GGWCC	2 cut(s)	141, 1088
Eco53kI	GAGCTC	2 cut(s)	163, 500
Eco57I	CTGAAG	3 cut(s)	160, 1962, 1971
Eco81I	CCTNAGG	1 cut(s)	258
Eco88I	CYCGRG	1 cut(s)	1628
EcoICRI	GAGCTC	2 cut(s)	163, 500
EcoO109I	RGGNCCY	1 cut(s)	1088
EcoRI	GAATTC	3 cut(s)	563, 1080, 2169
EcoRII	CCWGG	1 cut(s)	137
EcoRV	GATATC	1 cut(s)	1375
EcoT14I	CCWWGG	1 cut(s)	127
EcoT38I	GRGCYC	2 cut(s)	165, 502
ErhI	CCWWGG	1 cut(s)	127
Esp3I	CGTCTC	1 cut(s)	113
FaqI	GGGAC	2 cut(s)	1101, 1963
FbaI	TGATCA	1 cut(s)	703
FblI	GTMKAC	2 cut(s)	279, 2180
Fnu4HI	GCNGC	4 cut(s)	613, 1251, 1287, 1644
FokI	GGATG	8 cut(s)	275, 605, 638, 693, 1031, 1122, 1359, 1363
FriOI	GRGCYC	2 cut(s)	165, 502
Fsp4HI	GCNGC	4 cut(s)	613, 1251, 1287, 1644
FspBI	CTAG	4 cut(s)	380, 453, 846, 1448
GlaI	GCGC	1 cut(s)	1458
GluI	GCNGC	4 cut(s)	613, 1251, 1287, 1644
GsuI	CTGGAG	1 cut(s)	1553
HaeIII	GGCC	6 cut(s)	830, 1471, 1502, 1509, 1695, 2033
HapII	CCGG	8 cut(s)	28, 825, 1101, 1464, 1506, 1703, 1773, 1956
HhaI	GCGC	1 cut(s)	1459
Hin6I	GCGC	1 cut(s)	1457
HinP1I	GCGC	1 cut(s)	1457
HincII	GTYRAC	2 cut(s)	217, 910
HindII	GTYRAC	2 cut(s)	217, 910
HinfI	GANTC	6 cut(s)	208, 463, 754, 849, 1452, 2078
HpaII	CCGG	8 cut(s)	28, 825, 1101, 1464, 1506, 1703, 1773, 1956
HphI	GGTGA	5 cut(s)	181, 409, 508, 1660, 1957
Hpy166II	GTNNAC	8 cut(s)	171, 217, 280, 334, 892, 910, 1749, 2181
Hpy188III	TCNNGA	8 cut(s)	537, 786, 855, 1077, 1101, 1259, 1628, 2157
Hpy8I	GTNNAC	8 cut(s)	171, 217, 280, 334, 892, 910, 1749, 2181
HpyAV	CCTTC	6 cut(s)	184, 430, 583, 1240, 1684, 1928
HpyCH4III	ACNGT	7 cut(s)	331, 340, 896, 1010, 1196, 1366, 1891
HpyCH4IV	ACGT	2 cut(s)	888, 1199
HpyF10VI	GCNNNNNNNGC	5 cut(s)	253, 1232, 1652, 1935, 2204
HpyF3I	CTNAG	6 cut(s)	258, 608, 1526, 1621, 1766, 1853
HpySE526I	ACGT	2 cut(s)	888, 1199
HspAI	GCGC	1 cut(s)	1457
Kpn2I	TCCGGA	1 cut(s)	1100
Ksp22I	TGATCA	1 cut(s)	703
Kzo9I	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
LmnI	GCTCC	2 cut(s)	505, 877
Lsp1109I	GCAGC	4 cut(s)	624, 1262, 1273, 1630
LweI	GCATC	3 cut(s)	449, 616, 1222
MaeI	CTAG	4 cut(s)	380, 453, 846, 1448
MaeII	ACGT	2 cut(s)	888, 1199
MaeIII	GTNAC	6 cut(s)	289, 668, 896, 1004, 1297, 1900
MalI	GATC	7 cut(s)	705, 955, 1023, 1360, 1414, 1736, 2155
MboI	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
MboII	GAAGA	9 cut(s)	70, 592, 920, 991, 1382, 1827, 1885, 1955, 2206
MflI	RGATCY	2 cut(s)	1358, 1412
MhlI	GDGCHC	3 cut(s)	39, 165, 502
MlsI	TGGCCA	1 cut(s)	2033
MluCI	AATT	8 cut(s)	523, 563, 1080, 1150, 1211, 1961, 2018, 2169
MluNI	TGGCCA	1 cut(s)	2033
MlyI	GAGTC	1 cut(s)	858
MmeI	TCCRAC	4 cut(s)	734, 1144, 1288, 1388
Mox20I	TGGCCA	1 cut(s)	2033
MroI	TCCGGA	1 cut(s)	1100
MscI	TGGCCA	1 cut(s)	2033
MseI	TTAA	3 cut(s)	1634, 2021, 2190
MslI	CAYNNNNRTG	1 cut(s)	2003
Msp20I	TGGCCA	1 cut(s)	2033
MspA1I	CMGCKG	1 cut(s)	1226
MspI	CCGG	8 cut(s)	28, 825, 1101, 1464, 1506, 1703, 1773, 1956
MspR9I	CCNGG	3 cut(s)	29, 139, 826
Mva1269I	GAATGC	1 cut(s)	149
MvaI	CCWGG	1 cut(s)	139
MvnI	CGCG	1 cut(s)	1457
MwoI	GCNNNNNNNGC	5 cut(s)	253, 1232, 1652, 1935, 2204
NciI	CCSGG	2 cut(s)	29, 826
NcoI	CCATGG	1 cut(s)	127
NdeII	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
NlaIV	GGNNCC	4 cut(s)	255, 829, 1089, 1360
NmuCI	GTSAC	4 cut(s)	289, 668, 896, 1004
NspI	RCATGY	5 cut(s)	387, 883, 904, 1257, 1267
NspV	TTCGAA	1 cut(s)	752
PaeI	GCATGC	1 cut(s)	387
PaeR7I	CTCGAG	1 cut(s)	1628
PciI	ACATGT	1 cut(s)	900
PctI	GAATGC	1 cut(s)	149
PfeI	GAWTC	5 cut(s)	208, 463, 754, 1452, 2078
PflMI	CCANNNNNTGG	1 cut(s)	1810
PinAI	ACCGGT	2 cut(s)	1463, 1772
PkrI	GCNGC	4 cut(s)	614, 1252, 1288, 1645
PleI	GAGTC	1 cut(s)	857
PpsI	GAGTC	1 cut(s)	857
PpuMI	RGGWCCY	1 cut(s)	1088
PscI	ACATGT	1 cut(s)	900
PshAI	GACNNNNGTC	1 cut(s)	848
PsiI	TTATAA	1 cut(s)	71
Psp124BI	GAGCTC	2 cut(s)	165, 502
Psp5II	RGGWCCY	1 cut(s)	1088
Psp6I	CCWGG	1 cut(s)	137
PspGI	CCWGG	1 cut(s)	137
PspN4I	GGNNCC	4 cut(s)	255, 829, 1089, 1360
PspPI	GGNCC	6 cut(s)	141, 828, 1088, 1469, 1500, 1693
PspPPI	RGGWCCY	1 cut(s)	1088
PsrI	GAACNNNNNNTAC	2 cut(s)	324, 356
PsuI	RGATCY	2 cut(s)	1358, 1412
PvuII	CAGCTG	1 cut(s)	1226
RsaI	GTAC	7 cut(s)	482, 693, 878, 1198, 1552, 1748, 1763
RsaNI	GTAC	7 cut(s)	481, 692, 877, 1197, 1551, 1747, 1762
RseI	CAYNNNNRTG	1 cut(s)	2003
SacI	GAGCTC	2 cut(s)	165, 502
SaqAI	TTAA	3 cut(s)	1634, 2021, 2190
SatI	GCNGC	4 cut(s)	613, 1251, 1287, 1644
Sau3AI	GATC	7 cut(s)	703, 953, 1021, 1358, 1412, 1734, 2153
Sau96I	GGNCC	6 cut(s)	141, 828, 1088, 1469, 1500, 1693
SchI	GAGTC	1 cut(s)	858
ScrFI	CCNGG	3 cut(s)	29, 139, 826
SduI	GDGCHC	3 cut(s)	39, 165, 502
SfaNI	GCATC	3 cut(s)	449, 616, 1222
SfcI	CTRYAG	1 cut(s)	1657
Sfr274I	CTCGAG	1 cut(s)	1628
SfuI	TTCGAA	1 cut(s)	752
SinI	GGWCC	2 cut(s)	141, 1088
SlaI	CTCGAG	1 cut(s)	1628
SmiMI	CAYNNNNRTG	1 cut(s)	2003
SmlI	CTYRAG	2 cut(s)	993, 1628
SmoI	CTYRAG	2 cut(s)	993, 1628
SphI	GCATGC	1 cut(s)	387
Sse9I	AATT	8 cut(s)	523, 563, 1080, 1150, 1211, 1961, 2018, 2169
SsiI	CCGC	3 cut(s)	238, 629, 2037
SspMI	CTAG	4 cut(s)	380, 453, 846, 1448
SstI	GAGCTC	2 cut(s)	165, 502
StyD4I	CCNGG	3 cut(s)	27, 137, 824
StyI	CCWWGG	1 cut(s)	127
TaaI	ACNGT	7 cut(s)	331, 340, 896, 1010, 1196, 1366, 1891
TaiI	ACGT	2 cut(s)	891, 1202
TaqI	TCGA	4 cut(s)	663, 752, 1629, 1896
TasI	AATT	8 cut(s)	523, 563, 1080, 1150, 1211, 1961, 2018, 2169
TatI	WGTACW	3 cut(s)	480, 691, 1746
TfiI	GAWTC	5 cut(s)	208, 463, 754, 1452, 2078
Tru1I	TTAA	3 cut(s)	1634, 2021, 2190
Tru9I	TTAA	3 cut(s)	1634, 2021, 2190
TseFI	GTSAC	4 cut(s)	289, 668, 896, 1004
TseI	GCWGC	4 cut(s)	612, 1250, 1286, 1643
Tsp45I	GTSAC	4 cut(s)	289, 668, 896, 1004
TspGWI	ACGGA	1 cut(s)	864
Van91I	CCANNNNNTGG	1 cut(s)	1810
VpaK11BI	GGWCC	2 cut(s)	141, 1088
XapI	RAATTY	5 cut(s)	563, 1080, 1211, 1961, 2169
XceI	RCATGY	5 cut(s)	387, 883, 904, 1257, 1267
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2041
XhoI	CTCGAG	1 cut(s)	1628
XmiI	GTMKAC	2 cut(s)	279, 2180
XspI	CTAG	4 cut(s)	380, 453, 846, 1448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.