Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

78945791 .. 78950070

Gene Structure 4280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG560400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGGCCAACTCAAACTCTCTTCCTCTCTATGAAAGGGTTGAGCACAGAAACACACTACATAAAGTCATGGAGTTTATAATCCTCTTCCTCCTCCTTTCACTCCTTGCTTATCGTCTCCTCTCATTCAACAACCATAAATTATCCTGGTCCATCGCATTTCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATGAGCAACAAATGGAATCTTGTTGACCATAAACCATACCCCGACCGCCTCTTGCAACGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCATAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCGAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCACCAATAATTCCAAGCTTTCTGGAAATAATAATAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGATGGTGAAGGATGAGTATGAGCAACTTAGTAGCAAAATCGAGGATGTGGTGCGCAAATCTGTCAATCCATCTGATATTATTGAAGGCGACTTTTTAGTTTTCTCAAATGTACAACGTAATAATCATCCAACAATAATCAAGGTTGTATGGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCGCATTTAGTATATATATCCAGAGAAAAACGGCCAAAGCGTCCACATCATGCCAAAGCTGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACTAATGCTCCATACATGCTAAACGTGGACTGTGACATGTTCGCCAGCAGCCCGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTCTTCTATGGTGGTCTAAAGGATGATCCTTTCGGAAATCAGATGGTAGTTTTGTGGAAGTATGTAGCGCACGGAATTTCAGGAATTCAGGGGCCTTTTTATTCCGGAACAGGATGTGTTCATAGACGAAGAGTCATCTATGGTCTATCCCCCAATTATGTGAAAGTTGGAGAAACAAATGCAAAAAGCATGATGCACGGTAAATCAGTCGATGAAGAACTACTTGATATGTTTGGGAAGGAATTCACCAAATCAGCTGCTGATGCTTTGAACGGGAAGGCAGAGTGTTCTAACATGCTTACGAAAACTATTGAGGCTGCTTACTTAGTAGCTGGTGTTGGATATGAGTATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCCACAACTGAAGATATCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTCTTTATGCACCAGATCCACCAGCCTTTCTAGGATGCGCACCTACTGGTGGACCTGCTTCAATGACCCAACAAAAAAGGTGGGCCACTGGACTACTTGAAATCCTCCTCAGCAAAAACTGCCCCATATTTGGCTCTCTCTTTGCAAACCTCCAGTTCAGGCAGTGCTTGGCCTACTTCTGGATCCTTTCATGGGGCCTACGCTCAGTTCCCGAGCTGTGCTATGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCCAAGGGCCAAGAACCAGCTTACTATATACCCATATCTGTGTTTCTGTTCTACAATTTGTACACTTTATTAGAGCACCTTAGAACCAGTCTATCAATCCGAGCATGGTGGAACAACCAAAGAATGGGAAGAATAACCACAATGAGTGCCTGGCTTTTTGGATTTCTTGGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTTGAAGTAACACGGAAAGACCAATCTACTTCAAGTGATGAAGGCGCTGAAGATACTGAAGCCGGACAATTCACCTTTGACCAGTCCCCAGTTTTCGTACCTCCCACAGCAATGTTGCTTCTGCAATTAACAGCACTGGCCACTGCTTTGTTGCGGCTTCAACCATCAGCCCGTGATGGGGTGGGATCGGGCTCTTTGGAGACAATGTTTAGTATCTTGTTAGTGGTATGCTTATGGCCATTTTTGAAAGGTCTATTTGGATCAGGAAAGTATGGAATTCCTCTGTCTACCATATTTAAGTCTGCTAGTCTTGCACTACTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

758

Amino Acids

85.39

Weight (kDa)

8.52

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	95 - 396	1.3e-86	Cellulose synthase
Cellulose_synt	PF03552	433 - 743	1.4e-55	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
Acc16I	TGCGCA	2 cut(s)	647, 1495
Acc36I	ACCTGC	1 cut(s)	1519
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	1849
AccI	GTMKAC	2 cut(s)	285, 2219
AccIII	TCCGGA	1 cut(s)	1112
AciI	CCGC	3 cut(s)	244, 779, 2086
AcoI	YGGCCR	4 cut(s)	3, 809, 2070, 2168
AcsI	RAATTY	5 cut(s)	575, 1083, 1092, 1250, 2208
AcuI	CTGAAG	4 cut(s)	166, 1428, 2001, 2010
AdeI	CACNNNGTG	1 cut(s)	2265
AfaI	GTAC	4 cut(s)	488, 705, 1787, 2031
AfiI	CCNNNNNNNGG	9 cut(s)	186, 837, 1505, 1586, 1635, 1648, 1849, 2109, 2110
AflIII	ACRYGT	1 cut(s)	912
AhdI	GACNNNNNGTC	1 cut(s)	1139
AjnI	CCWGG	2 cut(s)	143, 1874
AjuI	GAANNNNNNNTTGG	2 cut(s)	1703, 1735
Alw21I	GWGCWC	4 cut(s)	45, 171, 508, 1803
Alw26I	GTCTC	5 cut(s)	119, 357, 868, 1919, 2126
AlwNI	CAGNNNCTG	1 cut(s)	1268
Ama87I	CYCGRG	1 cut(s)	1667
Aor13HI	TCCGGA	1 cut(s)	1112
ApeKI	GCWGC	4 cut(s)	924, 1265, 1325, 1682
ApoI	RAATTY	5 cut(s)	575, 1083, 1092, 1250, 2208
Asp700I	GAANNNNTTC	1 cut(s)	1250
AspLEI	GCGC	4 cut(s)	648, 1078, 1496, 1979
AspS9I	GGNCC	7 cut(s)	147, 840, 1100, 1508, 1539, 1651, 1732
AsuHPI	GGTGA	7 cut(s)	187, 415, 514, 610, 1246, 1699, 1996
AsuII	TTCGAA	1 cut(s)	764
AvaI	CYCGRG	1 cut(s)	1667
AvaII	GGWCC	2 cut(s)	147, 1508
AxyI	CCTNAGG	1 cut(s)	264
BalI	TGGCCA	3 cut(s)	5, 2072, 2170
BamHI	GGATCC	2 cut(s)	1397, 1638
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	3 cut(s)	171, 508, 2126
BbsI	GAAGAC	1 cut(s)	1003
Bbv12I	GWGCWC	4 cut(s)	45, 171, 508, 1803
BbvCI	CCTCAGC	1 cut(s)	1565
BbvI	GCAGC	4 cut(s)	936, 1252, 1312, 1669
BccI	CCATC	8 cut(s)	158, 401, 589, 670, 1045, 1380, 2102, 2104
BceAI	ACGGC	1 cut(s)	824
BciT130I	CCWGG	2 cut(s)	145, 1876
BcoDI	GTCTC	5 cut(s)	119, 357, 868, 1919, 2126
BfaI	CTAG	4 cut(s)	386, 858, 1487, 2238
BfmI	CTRYAG	1 cut(s)	1696
BfoI	RGCGCY	1 cut(s)	1980
BfuAI	ACCTGC	1 cut(s)	1519
BisI	GCNGC	6 cut(s)	779, 925, 1266, 1326, 1683, 2087
BlsI	GCNGC	6 cut(s)	780, 926, 1267, 1327, 1684, 2088
Bme1390I	CCNGG	2 cut(s)	145, 1876
Bme18I	GGWCC	2 cut(s)	147, 1508
BmeRI	GACNNNNNGTC	1 cut(s)	1139
BmeT110I	CYCGRG	1 cut(s)	1667
BmgT120I	GGNCC	7 cut(s)	147, 840, 1100, 1508, 1539, 1651, 1732
BmiI	GGNNCC	7 cut(s)	261, 471, 841, 1101, 1399, 1640, 1652
BmrFI	CCNGG	2 cut(s)	145, 1876
BmrI	ACTGGG	2 cut(s)	1431, 2015
BmsI	GCATC	4 cut(s)	455, 1191, 1261, 1481
BmuI	ACTGGG	2 cut(s)	1431, 2015
BoxI	GACNNNNGTC	1 cut(s)	860
BpiI	GAAGAC	1 cut(s)	1003
BpmI	CTGGAG	1 cut(s)	1592
Bpu10I	CCTNAGC	1 cut(s)	1565
Bpu14I	TTCGAA	1 cut(s)	764
BpuEI	CTTGAG	1 cut(s)	990
Bsa29I	ATCGAT	1 cut(s)	769
BsaJI	CCNNGG	1 cut(s)	1728
BsaWI	WCCGGW	1 cut(s)	1112
BsaXI	ACNNNNNCTCC	4 cut(s)	868, 898, 2123, 2153
Bsc4I	CCNNNNNNNGG	9 cut(s)	186, 837, 1505, 1586, 1635, 1648, 1849, 2109, 2110
Bse1I	ACTGG	8 cut(s)	1426, 1507, 1549, 1609, 1812, 2014, 2021, 2073
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	2 cut(s)	954, 2049
BseAI	TCCGGA	1 cut(s)	1112
BseBI	CCWGG	2 cut(s)	145, 1876
BseCI	ATCGAT	1 cut(s)	769
BseDI	CCNNGG	1 cut(s)	1728
BseGI	GGATG	9 cut(s)	274, 610, 643, 718, 1036, 1127, 1391, 1395, 1496
BseLI	CCNNNNNNNGG	9 cut(s)	186, 837, 1505, 1586, 1635, 1648, 1849, 2109, 2110
BseMI	GCAATG	2 cut(s)	954, 2049
BseMII	CTCAG	2 cut(s)	1579, 1674
BseNI	ACTGG	8 cut(s)	1426, 1507, 1549, 1609, 1812, 2014, 2021, 2073
BseRI	GAGGAG	3 cut(s)	80, 107, 1553
BseXI	GCAGC	4 cut(s)	936, 1252, 1312, 1669
BseYI	CCCAGC	1 cut(s)	836
Bsh1285I	CGRYCG	1 cut(s)	244
BshNI	GGYRCC	1 cut(s)	259
BshVI	ATCGAT	1 cut(s)	769
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	4 cut(s)	45, 171, 508, 1803
BsiHKCI	CYCGRG	1 cut(s)	1667
BsiSI	CCGG	2 cut(s)	1113, 1995
BslFI	GGGAC	1 cut(s)	2002
BslI	CCNNNNNNNGG	9 cut(s)	186, 837, 1505, 1586, 1635, 1648, 1849, 2109, 2110
BsmAI	GTCTC	5 cut(s)	119, 357, 868, 1919, 2126
BsmBI	CGTCTC	1 cut(s)	119
BsmFI	GGGAC	1 cut(s)	2002
BsoBI	CYCGRG	1 cut(s)	1667
Bsp119I	TTCGAA	1 cut(s)	764
Bsp1286I	GDGCHC	5 cut(s)	45, 171, 508, 1803, 2126
Bsp13I	TCCGGA	1 cut(s)	1112
Bsp1407I	TGTACA	2 cut(s)	703, 1785
Bsp143I	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
BspACI	CCGC	3 cut(s)	244, 779, 2086
BspCNI	CTCAG	2 cut(s)	1578, 1673
BspDI	ATCGAT	1 cut(s)	769
BspEI	TCCGGA	1 cut(s)	1112
BspLI	GGNNCC	7 cut(s)	261, 471, 841, 1101, 1399, 1640, 1652
BspMI	ACCTGC	1 cut(s)	1519
BspT104I	TTCGAA	1 cut(s)	764
BspT107I	GGYRCC	1 cut(s)	259
BsrDI	GCAATG	2 cut(s)	954, 2049
BsrGI	TGTACA	2 cut(s)	703, 1785
BsrI	ACTGG	8 cut(s)	1426, 1507, 1549, 1609, 1812, 2014, 2021, 2073
BssECI	CCNNGG	1 cut(s)	1728
BssMI	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
BssT1I	CCWWGG	1 cut(s)	1728
Bst2UI	CCWGG	2 cut(s)	145, 1876
Bst4CI	ACNGT	4 cut(s)	346, 908, 1208, 1930
Bst6I	CTCTTC	4 cut(s)	24, 89, 1132, 2258
BstAPI	GCANNNNNTGC	2 cut(s)	259, 1575
BstAUI	TGTACA	2 cut(s)	703, 1785
BstBI	TTCGAA	1 cut(s)	764
BstC8I	GCNNGC	4 cut(s)	167, 391, 922, 1692
BstDEI	CTNAG	7 cut(s)	264, 459, 620, 1333, 1565, 1660, 1805
BstF5I	GGATG	9 cut(s)	274, 610, 643, 718, 1036, 1127, 1391, 1395, 1496
BstH2I	RGCGCY	1 cut(s)	1980
BstHHI	GCGC	4 cut(s)	648, 1078, 1496, 1979
BstKTI	GATC	9 cut(s)	773, 968, 1036, 1400, 1454, 1474, 1641, 2120, 2195
BstMAI	GTCTC	5 cut(s)	119, 357, 868, 1919, 2126
BstMBI	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	5 cut(s)	259, 1271, 1575, 1691, 2243
BstNI	CCWGG	2 cut(s)	145, 1876
BstNSI	RCATGY	4 cut(s)	393, 895, 916, 1306
BstPAI	GACNNNNGTC	1 cut(s)	860
BstSCI	CCNGG	2 cut(s)	143, 1874
BstSFI	CTRYAG	1 cut(s)	1696
BstV1I	GCAGC	4 cut(s)	936, 1252, 1312, 1669
BstV2I	GAAGAC	1 cut(s)	1003
BstX2I	RGATCY	4 cut(s)	1397, 1451, 1471, 1638
BstYI	RGATCY	4 cut(s)	1397, 1451, 1471, 1638
Bsu15I	ATCGAT	1 cut(s)	769
Bsu36I	CCTNAGG	1 cut(s)	264
BsuTUI	ATCGAT	1 cut(s)	769
BtgZI	GCGATG	1 cut(s)	136
BtsCI	GGATG	9 cut(s)	274, 610, 643, 718, 1036, 1127, 1391, 1395, 1496
BtsI	GCAGTG	2 cut(s)	1625, 2073
BtsIMutI	CAGTG	7 cut(s)	780, 1004, 1419, 1542, 1625, 2066, 2073
BveI	ACCTGC	1 cut(s)	1519
Cac8I	GCNNGC	4 cut(s)	167, 391, 922, 1692
CaiI	CAGNNNCTG	1 cut(s)	1268
CfoI	GCGC	4 cut(s)	648, 1078, 1496, 1979
Cfr13I	GGNCC	7 cut(s)	147, 840, 1100, 1508, 1539, 1651, 1732
ClaI	ATCGAT	1 cut(s)	769
CseI	GACGC	1 cut(s)	806
Csp6I	GTAC	4 cut(s)	487, 704, 1786, 2030
CspCI	CAANNNNNGTGG	2 cut(s)	1517, 1552
CviQI	GTAC	4 cut(s)	487, 704, 1786, 2030
DdeI	CTNAG	7 cut(s)	264, 459, 620, 1333, 1565, 1660, 1805
DpnI	GATC	9 cut(s)	772, 967, 1035, 1399, 1453, 1473, 1640, 2119, 2194
DpnII	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
DraIII	CACNNNGTG	1 cut(s)	2265
DriI	GACNNNNNGTC	1 cut(s)	1139
EaeI	YGGCCR	4 cut(s)	3, 809, 2070, 2168
Eam1104I	CTCTTC	4 cut(s)	24, 89, 1132, 2258
Eam1105I	GACNNNNNGTC	1 cut(s)	1139
EarI	CTCTTC	4 cut(s)	24, 89, 1132, 2258
Ecl136II	GAGCTC	2 cut(s)	169, 506
Eco130I	CCWWGG	1 cut(s)	1728
Eco24I	GRGCYC	3 cut(s)	171, 508, 2126
Eco32I	GATATC	1 cut(s)	1414
Eco47I	GGWCC	2 cut(s)	147, 1508
Eco53kI	GAGCTC	2 cut(s)	169, 506
Eco57I	CTGAAG	4 cut(s)	166, 1428, 2001, 2010
Eco81I	CCTNAGG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	1667
EcoICRI	GAGCTC	2 cut(s)	169, 506
EcoO109I	RGGNCCY	2 cut(s)	1100, 1651
EcoRI	GAATTC	4 cut(s)	575, 1092, 1250, 2208
EcoRII	CCWGG	2 cut(s)	143, 1874
EcoRV	GATATC	1 cut(s)	1414
EcoT14I	CCWWGG	1 cut(s)	1728
EcoT22I	ATGCAT	1 cut(s)	991
EcoT38I	GRGCYC	3 cut(s)	171, 508, 2126
ErhI	CCWWGG	1 cut(s)	1728
Esp3I	CGTCTC	1 cut(s)	119
FalI	AAGNNNNNCTT	2 cut(s)	1215, 1247
FaqI	GGGAC	1 cut(s)	2002
FblI	GTMKAC	2 cut(s)	285, 2219
Fnu4HI	GCNGC	6 cut(s)	779, 925, 1266, 1326, 1683, 2087
FokI	GGATG	9 cut(s)	281, 617, 650, 705, 1043, 1134, 1398, 1402, 1503
FriOI	GRGCYC	3 cut(s)	171, 508, 2126
Fsp4HI	GCNGC	6 cut(s)	779, 925, 1266, 1326, 1683, 2087
FspAI	RTGCGCAY	1 cut(s)	1495
FspBI	CTAG	4 cut(s)	386, 858, 1487, 2238
FspI	TGCGCA	2 cut(s)	647, 1495
GlaI	GCGC	4 cut(s)	647, 1077, 1495, 1978
GluI	GCNGC	6 cut(s)	779, 925, 1266, 1326, 1683, 2087
GsaI	CCCAGC	1 cut(s)	840
GsuI	CTGGAG	1 cut(s)	1592
HaeII	RGCGCY	1 cut(s)	1980
HapII	CCGG	2 cut(s)	1113, 1995
HgaI	GACGC	1 cut(s)	806
HhaI	GCGC	4 cut(s)	648, 1078, 1496, 1979
Hin6I	GCGC	4 cut(s)	646, 1076, 1494, 1977
HinP1I	GCGC	4 cut(s)	646, 1076, 1494, 1977
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HindIII	AAGCTT	1 cut(s)	536
HinfI	GANTC	4 cut(s)	214, 766, 861, 1140
HpaII	CCGG	2 cut(s)	1113, 1995
HphI	GGTGA	7 cut(s)	187, 415, 514, 610, 1246, 1699, 1996
Hpy166II	GTNNAC	8 cut(s)	177, 223, 286, 821, 904, 1508, 1788, 2220
Hpy188I	TCNGA	7 cut(s)	403, 667, 855, 1043, 1050, 1826, 1924
Hpy188III	TCNNGA	7 cut(s)	543, 798, 1089, 1113, 1636, 1667, 2196
Hpy8I	GTNNAC	8 cut(s)	177, 223, 286, 821, 904, 1508, 1788, 2220
HpyAV	CCTTC	7 cut(s)	190, 436, 595, 671, 1240, 1279, 1967
HpyCH4III	ACNGT	4 cut(s)	346, 908, 1208, 1930
HpyCH4IV	ACGT	2 cut(s)	709, 900
HpyF10VI	GCNNNNNNNGC	5 cut(s)	259, 1271, 1575, 1691, 2243
HpyF3I	CTNAG	7 cut(s)	264, 459, 620, 1333, 1565, 1660, 1805
HpySE526I	ACGT	2 cut(s)	709, 900
HspAI	GCGC	4 cut(s)	646, 1076, 1494, 1977
Kpn2I	TCCGGA	1 cut(s)	1112
Kzo9I	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
LmnI	GCTCC	2 cut(s)	511, 889
Lsp1109I	GCAGC	4 cut(s)	936, 1252, 1312, 1669
LweI	GCATC	4 cut(s)	455, 1191, 1261, 1481
MaeI	CTAG	4 cut(s)	386, 858, 1487, 2238
MaeII	ACGT	2 cut(s)	709, 900
MaeIII	GTNAC	3 cut(s)	295, 908, 1939
MalI	GATC	9 cut(s)	772, 967, 1035, 1399, 1453, 1473, 1640, 2119, 2194
MboI	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
MflI	RGATCY	4 cut(s)	1397, 1451, 1471, 1638
MhlI	GDGCHC	5 cut(s)	45, 171, 508, 1803, 2126
MlsI	TGGCCA	3 cut(s)	5, 2072, 2170
MluNI	TGGCCA	3 cut(s)	5, 2072, 2170
MlyI	GAGTC	2 cut(s)	870, 1149
MmeI	TCCRAC	4 cut(s)	746, 1156, 1327, 1427
Mox20I	TGGCCA	3 cut(s)	5, 2072, 2170
Mph1103I	ATGCAT	1 cut(s)	991
MroI	TCCGGA	1 cut(s)	1112
MroXI	GAANNNNTTC	1 cut(s)	1250
MscI	TGGCCA	3 cut(s)	5, 2072, 2170
MseI	TTAA	2 cut(s)	2060, 2229
MslI	CAYNNNNRTG	3 cut(s)	197, 1763, 2042
Msp20I	TGGCCA	3 cut(s)	5, 2072, 2170
MspA1I	CMGCKG	1 cut(s)	1265
MspI	CCGG	2 cut(s)	1113, 1995
MspR9I	CCNGG	2 cut(s)	145, 1876
MvaI	CCWGG	2 cut(s)	145, 1876
MwoI	GCNNNNNNNGC	5 cut(s)	259, 1271, 1575, 1691, 2243
NdeII	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
NlaIV	GGNNCC	7 cut(s)	261, 471, 841, 1101, 1399, 1640, 1652
NmuCI	GTSAC	2 cut(s)	295, 908
NsbI	TGCGCA	2 cut(s)	647, 1495
NsiI	ATGCAT	1 cut(s)	991
NspI	RCATGY	4 cut(s)	393, 895, 916, 1306
NspV	TTCGAA	1 cut(s)	764
PaeI	GCATGC	1 cut(s)	393
PciI	ACATGT	1 cut(s)	912
PcsI	WCGNNNNNNNCGW	1 cut(s)	814
PdmI	GAANNNNTTC	1 cut(s)	1250
PfeI	GAWTC	2 cut(s)	214, 766
PflMI	CCANNNNNTGG	1 cut(s)	1849
PkrI	GCNGC	6 cut(s)	780, 926, 1267, 1327, 1684, 2088
PleI	GAGTC	2 cut(s)	869, 1148
PpsI	GAGTC	2 cut(s)	869, 1148
PscI	ACATGT	1 cut(s)	912
PshAI	GACNNNNGTC	1 cut(s)	860
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	2 cut(s)	171, 508
Psp6I	CCWGG	2 cut(s)	143, 1874
PspFI	CCCAGC	1 cut(s)	836
PspGI	CCWGG	2 cut(s)	143, 1874
PspN4I	GGNNCC	7 cut(s)	261, 471, 841, 1101, 1399, 1640, 1652
PspPI	GGNCC	7 cut(s)	147, 840, 1100, 1508, 1539, 1651, 1732
PstNI	CAGNNNCTG	1 cut(s)	1268
PsuI	RGATCY	4 cut(s)	1397, 1451, 1471, 1638
PvuII	CAGCTG	1 cut(s)	1265
RsaI	GTAC	4 cut(s)	488, 705, 1787, 2031
RsaNI	GTAC	4 cut(s)	487, 704, 1786, 2030
RseI	CAYNNNNRTG	3 cut(s)	197, 1763, 2042
SacI	GAGCTC	2 cut(s)	171, 508
SaqAI	TTAA	2 cut(s)	2060, 2229
SatI	GCNGC	6 cut(s)	779, 925, 1266, 1326, 1683, 2087
Sau3AI	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
Sau96I	GGNCC	7 cut(s)	147, 840, 1100, 1508, 1539, 1651, 1732
SchI	GAGTC	2 cut(s)	870, 1149
ScrFI	CCNGG	2 cut(s)	145, 1876
SduI	GDGCHC	5 cut(s)	45, 171, 508, 1803, 2126
SfaNI	GCATC	4 cut(s)	455, 1191, 1261, 1481
SfcI	CTRYAG	1 cut(s)	1696
SfuI	TTCGAA	1 cut(s)	764
SinI	GGWCC	2 cut(s)	147, 1508
SmiMI	CAYNNNNRTG	3 cut(s)	197, 1763, 2042
SmlI	CTYRAG	1 cut(s)	1005
SmoI	CTYRAG	1 cut(s)	1005
SphI	GCATGC	1 cut(s)	393
SsiI	CCGC	3 cut(s)	244, 779, 2086
SspMI	CTAG	4 cut(s)	386, 858, 1487, 2238
SstI	GAGCTC	2 cut(s)	171, 508
StyD4I	CCNGG	2 cut(s)	143, 1874
StyI	CCWWGG	1 cut(s)	1728
TaaI	ACNGT	4 cut(s)	346, 908, 1208, 1930
TaiI	ACGT	2 cut(s)	712, 903
TaqI	TCGA	5 cut(s)	449, 633, 764, 769, 1218
TatI	WGTACW	3 cut(s)	486, 703, 1785
TauI	GCSGC	2 cut(s)	781, 2089
TfiI	GAWTC	2 cut(s)	214, 766
Tru1I	TTAA	2 cut(s)	2060, 2229
Tru9I	TTAA	2 cut(s)	2060, 2229
TscAI	CASTG	7 cut(s)	780, 1004, 1426, 1549, 1625, 2073, 2080
TseFI	GTSAC	2 cut(s)	295, 908
TseI	GCWGC	4 cut(s)	924, 1265, 1325, 1682
Tsp45I	GTSAC	2 cut(s)	295, 908
TspGWI	ACGGA	2 cut(s)	1095, 1960
TspRI	CASTG	7 cut(s)	780, 1004, 1426, 1549, 1625, 2073, 2080
Van91I	CCANNNNNTGG	1 cut(s)	1849
VpaK11BI	GGWCC	2 cut(s)	147, 1508
XapI	RAATTY	5 cut(s)	575, 1083, 1092, 1250, 2208
XceI	RCATGY	4 cut(s)	393, 895, 916, 1306
XmiI	GTMKAC	2 cut(s)	285, 2219
XmnI	GAANNNNTTC	1 cut(s)	1250
XspI	CTAG	4 cut(s)	386, 858, 1487, 2238
Zsp2I	ATGCAT	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.