Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

71149843 .. 71154049

Gene Structure 4207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G044510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGCCAACTCAAACTCTCTTCATCTCTATGAAAAGGTTGAGCTTAGAAACACACTACATAGAGTCATAGAGTTTATAATCCTCTTCCTCCTCCTTTCACTCCTTGTTTATCGTCTCCTCTCATTCAACAACCATAAATTATCCTGGTCCATCGCATTTCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATGAGCAACAAATGGAATCTTGTTGACCATAAACCATACCCCGACCGCCTCTTGCAACGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCGTAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCGAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTATAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCACCAATAATTCCATGCTTTCTGGAAATAATAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGATGGTGAAGGATGCGTATGAGCAACTTAGTAGCAAAATCGAGGATGTGGTGCGCAAATCTATCAATCCATCTGATATTATTGAAGGCGACTTTTTAGTTTTCTCAAATGTACAACGTAATAATCATCCAACAATAATCAAGGTTGTATGGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCGCATTTAGTATATATATCCAGAGAAAAACGGCCAAAGCGTCCACATCATGCCAAAGCTGGGGCCATGAATGTTCTGACCAGAGTCTCTGGGTTGATGACTAATGCTCCATACATGCTAAACGTGGACTGTGACATGTTCGCCAGCAGCCCGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTCTTCTATGGTGGTCTAAAGGATGATCCTTTCGGAAATCATATGGTAGTTTTGTGGAAGTATGTAGCGCACGGAATTTCAGGAATTCAGGGGCCTTTTTATTCCGGAACAGGATGTGTTCATAGACGAAGAGTCATCTATGGTCTATCCCCCAATTATGTGAAAGTTGGAGAAACAAATGCAAAAAGCATGATGCAGGGTAAATCAGTCGATGAAGAACTACTTGATATGTTTGGGAAGGAATTCACCAAATCAGCTGCTGATGCTTTGAACGGGAAGGCAGGGTGTTCTAACATGCTTACGAAAACTATTGAGGCTGCTTGCTTAGTTGCTGGTGTTGGATATGAGTATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCCACAACTGAAGATATCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTCTTTATGCACCAGATCCACCAGCCTTTCTAGGATGCGCACCTACTGGTGGACCTGCTTCAATGACCCAACAAAAAAGGTGGGCCACTGGCCTACTTGAAATCCTCCTCAGCAAAAACTGCCCCATATTCGGCACTCTCTTTGCAAACCTCCAATTCAGGCAGTGCTTGGCCTACTTCTGGATCCTTTCATGGGGCCTACGCTCAGTTCCCGAGCTGTGCTATGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCCAAGGGCCAAGAACGAGCTTACTATATACCCATATCTGTGTTTCTGTTCTACAATTTGTACACTTTATTAGAGTACCTTAGAACCAGTCTATCAATCCGAGCATGGTGGAACAACCAAAGAATGGGAAGAATAACCACAATGAGTGCATGGCTTTTTGGATTTCTTGGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTTGAAGTAACACGGAAAGACCAATCTACTTCAAGCGATGAAGGCACTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCGTACCTCCCACAGCAATGTTGTTTATGCAATTAACAGCACTGGCCACCGCTTTGTTGCGGCTTCAACCACCTGCCCGTGATGGGGTGGGATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTAGTGGTATGCTTATGGCCATTTTTGAAAGGTCTGTTTGGATCAGGAAAGTATGGAATTCCTCTATCTACCATATTTAAATCTGTTGGTCTTGCACTACTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

757

Amino Acids

85.24

Weight (kDa)

8.69

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	95 - 394	4.9e-86	Cellulose synthase
Cellulose_synt	PF03552	432 - 748	7.2e-54	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
AarI	CACCTGC	1 cut(s)	2104
Acc16I	TGCGCA	2 cut(s)	644, 1492
Acc36I	ACCTGC	2 cut(s)	1516, 2104
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	1846
AccI	GTMKAC	1 cut(s)	285
AccIII	TCCGGA	1 cut(s)	1109
AciI	CCGC	4 cut(s)	244, 776, 2073, 2083
AcoI	YGGCCR	4 cut(s)	3, 806, 2067, 2165
AcsI	RAATTY	6 cut(s)	572, 1080, 1089, 1247, 1997, 2205
AcuI	CTGAAG	4 cut(s)	166, 1425, 1998, 2007
AdeI	CACNNNGTG	1 cut(s)	2262
AfaI	GTAC	4 cut(s)	702, 1784, 1799, 2028
AfiI	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
AflIII	ACRYGT	1 cut(s)	909
AhdI	GACNNNNNGTC	1 cut(s)	1136
AjnI	CCWGG	1 cut(s)	143
AjuI	GAANNNNNNNTTGG	2 cut(s)	1700, 1732
Alw21I	GWGCWC	2 cut(s)	171, 508
Alw26I	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
AlwNI	CAGNNNCTG	1 cut(s)	1265
Ama87I	CYCGRG	1 cut(s)	1664
Aor13HI	TCCGGA	1 cut(s)	1109
ApeKI	GCWGC	4 cut(s)	921, 1262, 1322, 1679
ApoI	RAATTY	6 cut(s)	572, 1080, 1089, 1247, 1997, 2205
Asp700I	GAANNNNTTC	1 cut(s)	1247
AspLEI	GCGC	3 cut(s)	645, 1075, 1493
AspS9I	GGNCC	7 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729
AsuHPI	GGTGA	7 cut(s)	187, 415, 514, 607, 1243, 1696, 1993
AsuII	TTCGAA	1 cut(s)	761
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	2 cut(s)	147, 1505
AxyI	CCTNAGG	1 cut(s)	264
BalI	TGGCCA	3 cut(s)	5, 2069, 2167
BamHI	GGATCC	2 cut(s)	1394, 1635
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	2 cut(s)	171, 508
BbsI	GAAGAC	1 cut(s)	1000
Bbv12I	GWGCWC	2 cut(s)	171, 508
BbvCI	CCTCAGC	1 cut(s)	1562
BbvI	GCAGC	4 cut(s)	933, 1249, 1309, 1666
BccI	CCATC	6 cut(s)	158, 401, 586, 667, 1377, 2099
BceAI	ACGGC	1 cut(s)	821
BciT130I	CCWGG	1 cut(s)	145
BcoDI	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
BfaI	CTAG	2 cut(s)	386, 1484
BfmI	CTRYAG	1 cut(s)	1693
BfuAI	ACCTGC	2 cut(s)	1516, 2104
BisI	GCNGC	6 cut(s)	776, 922, 1263, 1323, 1680, 2084
BlsI	GCNGC	6 cut(s)	777, 923, 1264, 1324, 1681, 2085
Bme1390I	CCNGG	1 cut(s)	145
Bme18I	GGWCC	2 cut(s)	147, 1505
BmeRI	GACNNNNNGTC	1 cut(s)	1136
BmeT110I	CYCGRG	1 cut(s)	1664
BmgT120I	GGNCC	7 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729
BmiI	GGNNCC	7 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649
BmrFI	CCNGG	1 cut(s)	145
BmrI	ACTGGG	2 cut(s)	1428, 2012
BmsI	GCATC	5 cut(s)	455, 592, 1188, 1258, 1478
BmuI	ACTGGG	2 cut(s)	1428, 2012
BoxI	GACNNNNGTC	1 cut(s)	857
BpiI	GAAGAC	1 cut(s)	1000
Bpu10I	CCTNAGC	1 cut(s)	1562
Bpu14I	TTCGAA	1 cut(s)	761
BpuEI	CTTGAG	1 cut(s)	987
Bsa29I	ATCGAT	1 cut(s)	766
BsaI	GGTCTC	1 cut(s)	2123
BsaJI	CCNNGG	1 cut(s)	1725
BsaWI	WCCGGW	1 cut(s)	1109
BsaXI	ACNNNNNCTCC	4 cut(s)	865, 895, 2120, 2150
Bsc4I	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
Bse1I	ACTGG	7 cut(s)	1423, 1504, 1546, 1809, 2011, 2018, 2070
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	2 cut(s)	951, 2046
BseAI	TCCGGA	1 cut(s)	1109
BseBI	CCWGG	1 cut(s)	145
BseCI	ATCGAT	1 cut(s)	766
BseDI	CCNNGG	1 cut(s)	1725
BseGI	GGATG	9 cut(s)	274, 607, 640, 715, 1033, 1124, 1388, 1392, 1493
BseLI	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
BseMI	GCAATG	2 cut(s)	951, 2046
BseMII	CTCAG	2 cut(s)	1576, 1671
BseNI	ACTGG	7 cut(s)	1423, 1504, 1546, 1809, 2011, 2018, 2070
BseRI	GAGGAG	3 cut(s)	80, 107, 1550
BseXI	GCAGC	4 cut(s)	933, 1249, 1309, 1666
BseYI	CCCAGC	1 cut(s)	833
BsgI	GTGCAG	1 cut(s)	2158
Bsh1285I	CGRYCG	1 cut(s)	244
BshNI	GGYRCC	1 cut(s)	259
BshVI	ATCGAT	1 cut(s)	766
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	2 cut(s)	171, 508
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	2 cut(s)	1110, 1992
BslFI	GGGAC	1 cut(s)	1999
BslI	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
BsmAI	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
BsmBI	CGTCTC	1 cut(s)	119
BsmFI	GGGAC	1 cut(s)	1999
Bso31I	GGTCTC	1 cut(s)	2123
BsoBI	CYCGRG	1 cut(s)	1664
Bsp119I	TTCGAA	1 cut(s)	761
Bsp1286I	GDGCHC	2 cut(s)	171, 508
Bsp13I	TCCGGA	1 cut(s)	1109
Bsp1407I	TGTACA	2 cut(s)	700, 1782
Bsp143I	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
BspACI	CCGC	4 cut(s)	244, 776, 2073, 2083
BspCNI	CTCAG	2 cut(s)	1575, 1670
BspDI	ATCGAT	1 cut(s)	766
BspEI	TCCGGA	1 cut(s)	1109
BspLI	GGNNCC	7 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649
BspMI	ACCTGC	2 cut(s)	1516, 2104
BspT104I	TTCGAA	1 cut(s)	761
BspT107I	GGYRCC	1 cut(s)	259
BspTNI	GGTCTC	1 cut(s)	2123
BsrDI	GCAATG	2 cut(s)	951, 2046
BsrGI	TGTACA	2 cut(s)	700, 1782
BsrI	ACTGG	7 cut(s)	1423, 1504, 1546, 1809, 2011, 2018, 2070
BssECI	CCNNGG	1 cut(s)	1725
BssMI	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
BssT1I	CCWWGG	1 cut(s)	1725
Bst2UI	CCWGG	1 cut(s)	145
Bst4CI	ACNGT	4 cut(s)	337, 346, 905, 1927
Bst6I	CTCTTC	4 cut(s)	24, 89, 1129, 2255
BstAPI	GCANNNNNTGC	2 cut(s)	259, 1572
BstAUI	TGTACA	2 cut(s)	700, 1782
BstBI	TTCGAA	1 cut(s)	761
BstC8I	GCNNGC	5 cut(s)	167, 391, 919, 1327, 1689
BstDEI	CTNAG	8 cut(s)	44, 264, 459, 617, 1330, 1562, 1657, 1802
BstF5I	GGATG	9 cut(s)	274, 607, 640, 715, 1033, 1124, 1388, 1392, 1493
BstHHI	GCGC	3 cut(s)	645, 1075, 1493
BstKTI	GATC	9 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117, 2192
BstMAI	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
BstMBI	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	5 cut(s)	259, 1268, 1572, 1688, 1971
BstNI	CCWGG	1 cut(s)	145
BstNSI	RCATGY	4 cut(s)	393, 892, 913, 1303
BstPAI	GACNNNNGTC	1 cut(s)	857
BstSCI	CCNGG	1 cut(s)	143
BstSFI	CTRYAG	1 cut(s)	1693
BstV1I	GCAGC	4 cut(s)	933, 1249, 1309, 1666
BstV2I	GAAGAC	1 cut(s)	1000
BstX2I	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
BstYI	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
Bsu15I	ATCGAT	1 cut(s)	766
Bsu36I	CCTNAGG	1 cut(s)	264
BsuTUI	ATCGAT	1 cut(s)	766
BtgZI	GCGATG	2 cut(s)	136, 1980
BtsCI	GGATG	9 cut(s)	274, 607, 640, 715, 1033, 1124, 1388, 1392, 1493
BtsI	GCAGTG	2 cut(s)	1622, 2146
BtsIMutI	CAGTG	8 cut(s)	777, 1001, 1416, 1539, 1622, 1974, 2063, 2146
BveI	ACCTGC	2 cut(s)	1516, 2104
Cac8I	GCNNGC	5 cut(s)	167, 391, 919, 1327, 1689
CaiI	CAGNNNCTG	1 cut(s)	1265
CfoI	GCGC	3 cut(s)	645, 1075, 1493
Cfr13I	GGNCC	7 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729
ClaI	ATCGAT	1 cut(s)	766
CseI	GACGC	1 cut(s)	803
Csp6I	GTAC	4 cut(s)	701, 1783, 1798, 2027
CspCI	CAANNNNNGTGG	2 cut(s)	1514, 1549
CviQI	GTAC	4 cut(s)	701, 1783, 1798, 2027
DdeI	CTNAG	8 cut(s)	44, 264, 459, 617, 1330, 1562, 1657, 1802
DpnI	GATC	9 cut(s)	769, 964, 1032, 1396, 1450, 1470, 1637, 2116, 2191
DpnII	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
DraI	TTTAAA	1 cut(s)	2227
DraIII	CACNNNGTG	1 cut(s)	2262
DriI	GACNNNNNGTC	1 cut(s)	1136
EaeI	YGGCCR	4 cut(s)	3, 806, 2067, 2165
Eam1104I	CTCTTC	4 cut(s)	24, 89, 1129, 2255
Eam1105I	GACNNNNNGTC	1 cut(s)	1136
EarI	CTCTTC	4 cut(s)	24, 89, 1129, 2255
Ecl136II	GAGCTC	2 cut(s)	169, 506
Eco130I	CCWWGG	1 cut(s)	1725
Eco24I	GRGCYC	2 cut(s)	171, 508
Eco31I	GGTCTC	1 cut(s)	2123
Eco32I	GATATC	1 cut(s)	1411
Eco47I	GGWCC	2 cut(s)	147, 1505
Eco53kI	GAGCTC	2 cut(s)	169, 506
Eco57I	CTGAAG	4 cut(s)	166, 1425, 1998, 2007
Eco81I	CCTNAGG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	1664
EcoICRI	GAGCTC	2 cut(s)	169, 506
EcoO109I	RGGNCCY	2 cut(s)	1097, 1648
EcoRI	GAATTC	4 cut(s)	572, 1089, 1247, 2205
EcoRII	CCWGG	1 cut(s)	143
EcoRV	GATATC	1 cut(s)	1411
EcoT14I	CCWWGG	1 cut(s)	1725
EcoT22I	ATGCAT	1 cut(s)	988
EcoT38I	GRGCYC	2 cut(s)	171, 508
ErhI	CCWWGG	1 cut(s)	1725
Esp3I	CGTCTC	1 cut(s)	119
FalI	AAGNNNNNCTT	2 cut(s)	1212, 1244
FaqI	GGGAC	1 cut(s)	1999
FauNDI	CATATG	1 cut(s)	1047
FblI	GTMKAC	1 cut(s)	285
Fnu4HI	GCNGC	6 cut(s)	776, 922, 1263, 1323, 1680, 2084
FokI	GGATG	9 cut(s)	281, 614, 647, 702, 1040, 1131, 1395, 1399, 1500
FriOI	GRGCYC	2 cut(s)	171, 508
Fsp4HI	GCNGC	6 cut(s)	776, 922, 1263, 1323, 1680, 2084
FspAI	RTGCGCAY	1 cut(s)	1492
FspBI	CTAG	2 cut(s)	386, 1484
FspI	TGCGCA	2 cut(s)	644, 1492
GlaI	GCGC	3 cut(s)	644, 1074, 1492
GluI	GCNGC	6 cut(s)	776, 922, 1263, 1323, 1680, 2084
GsaI	CCCAGC	1 cut(s)	837
HapII	CCGG	2 cut(s)	1110, 1992
HgaI	GACGC	1 cut(s)	803
HhaI	GCGC	3 cut(s)	645, 1075, 1493
Hin6I	GCGC	3 cut(s)	643, 1073, 1491
HinP1I	GCGC	3 cut(s)	643, 1073, 1491
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HinfI	GANTC	5 cut(s)	63, 214, 763, 858, 1137
HpaII	CCGG	2 cut(s)	1110, 1992
HphI	GGTGA	7 cut(s)	187, 415, 514, 607, 1243, 1696, 1993
Hpy166II	GTNNAC	8 cut(s)	177, 223, 286, 340, 818, 901, 1505, 1785
Hpy188I	TCNGA	6 cut(s)	403, 664, 852, 1040, 1823, 1921
Hpy188III	TCNNGA	7 cut(s)	543, 795, 1086, 1110, 1633, 1664, 2193
Hpy8I	GTNNAC	8 cut(s)	177, 223, 286, 340, 818, 901, 1505, 1785
HpyAV	CCTTC	7 cut(s)	190, 436, 592, 668, 1237, 1276, 1964
HpyCH4III	ACNGT	4 cut(s)	337, 346, 905, 1927
HpyCH4IV	ACGT	2 cut(s)	706, 897
HpyF10VI	GCNNNNNNNGC	5 cut(s)	259, 1268, 1572, 1688, 1971
HpyF3I	CTNAG	8 cut(s)	44, 264, 459, 617, 1330, 1562, 1657, 1802
HpySE526I	ACGT	2 cut(s)	706, 897
HspAI	GCGC	3 cut(s)	643, 1073, 1491
Kpn2I	TCCGGA	1 cut(s)	1109
Kzo9I	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
LmnI	GCTCC	2 cut(s)	511, 886
Lsp1109I	GCAGC	4 cut(s)	933, 1249, 1309, 1666
LweI	GCATC	5 cut(s)	455, 592, 1188, 1258, 1478
MaeI	CTAG	2 cut(s)	386, 1484
MaeII	ACGT	2 cut(s)	706, 897
MaeIII	GTNAC	3 cut(s)	295, 905, 1936
MalI	GATC	9 cut(s)	769, 964, 1032, 1396, 1450, 1470, 1637, 2116, 2191
MboI	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
MflI	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
MhlI	GDGCHC	2 cut(s)	171, 508
MlsI	TGGCCA	3 cut(s)	5, 2069, 2167
MluNI	TGGCCA	3 cut(s)	5, 2069, 2167
MlyI	GAGTC	3 cut(s)	72, 867, 1146
MmeI	TCCRAC	4 cut(s)	743, 1153, 1324, 1424
Mox20I	TGGCCA	3 cut(s)	5, 2069, 2167
Mph1103I	ATGCAT	1 cut(s)	988
MroI	TCCGGA	1 cut(s)	1109
MroXI	GAANNNNTTC	1 cut(s)	1247
MscI	TGGCCA	3 cut(s)	5, 2069, 2167
MseI	TTAA	2 cut(s)	2057, 2226
MslI	CAYNNNNRTG	4 cut(s)	27, 197, 1760, 2039
Msp20I	TGGCCA	3 cut(s)	5, 2069, 2167
MspA1I	CMGCKG	1 cut(s)	1262
MspI	CCGG	2 cut(s)	1110, 1992
MspR9I	CCNGG	1 cut(s)	145
MvaI	CCWGG	1 cut(s)	145
MwoI	GCNNNNNNNGC	5 cut(s)	259, 1268, 1572, 1688, 1971
NdeI	CATATG	1 cut(s)	1047
NdeII	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
NlaIV	GGNNCC	7 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649
NmuCI	GTSAC	2 cut(s)	295, 905
NsbI	TGCGCA	2 cut(s)	644, 1492
NsiI	ATGCAT	1 cut(s)	988
NspI	RCATGY	4 cut(s)	393, 892, 913, 1303
NspV	TTCGAA	1 cut(s)	761
PaeI	GCATGC	1 cut(s)	393
PaqCI	CACCTGC	1 cut(s)	2104
PciI	ACATGT	1 cut(s)	909
PcsI	WCGNNNNNNNCGW	1 cut(s)	811
PdmI	GAANNNNTTC	1 cut(s)	1247
PfeI	GAWTC	2 cut(s)	214, 763
PflMI	CCANNNNNTGG	1 cut(s)	1846
PkrI	GCNGC	6 cut(s)	777, 923, 1264, 1324, 1681, 2085
PleI	GAGTC	3 cut(s)	71, 866, 1145
PpsI	GAGTC	3 cut(s)	71, 866, 1145
PscI	ACATGT	1 cut(s)	909
PshAI	GACNNNNGTC	1 cut(s)	857
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	2 cut(s)	171, 508
Psp6I	CCWGG	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	833
PspGI	CCWGG	1 cut(s)	143
PspN4I	GGNNCC	7 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649
PspPI	GGNCC	7 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729
PsrI	GAACNNNNNNTAC	2 cut(s)	330, 362
PstNI	CAGNNNCTG	1 cut(s)	1265
PsuI	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
PvuII	CAGCTG	1 cut(s)	1262
RsaI	GTAC	4 cut(s)	702, 1784, 1799, 2028
RsaNI	GTAC	4 cut(s)	701, 1783, 1798, 2027
RseI	CAYNNNNRTG	4 cut(s)	27, 197, 1760, 2039
SacI	GAGCTC	2 cut(s)	171, 508
SaqAI	TTAA	2 cut(s)	2057, 2226
SatI	GCNGC	6 cut(s)	776, 922, 1263, 1323, 1680, 2084
Sau3AI	GATC	9 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114, 2189
Sau96I	GGNCC	7 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729
SchI	GAGTC	3 cut(s)	72, 867, 1146
ScrFI	CCNGG	1 cut(s)	145
SduI	GDGCHC	2 cut(s)	171, 508
SfaNI	GCATC	5 cut(s)	455, 592, 1188, 1258, 1478
SfcI	CTRYAG	1 cut(s)	1693
SfuI	TTCGAA	1 cut(s)	761
SinI	GGWCC	2 cut(s)	147, 1505
SmiI	ATTTAAAT	1 cut(s)	2227
SmiMI	CAYNNNNRTG	4 cut(s)	27, 197, 1760, 2039
SmlI	CTYRAG	1 cut(s)	1002
SmoI	CTYRAG	1 cut(s)	1002
SphI	GCATGC	1 cut(s)	393
SsiI	CCGC	4 cut(s)	244, 776, 2073, 2083
SspMI	CTAG	2 cut(s)	386, 1484
SstI	GAGCTC	2 cut(s)	171, 508
StyD4I	CCNGG	1 cut(s)	143
StyI	CCWWGG	1 cut(s)	1725
SwaI	ATTTAAAT	1 cut(s)	2227
TaaI	ACNGT	4 cut(s)	337, 346, 905, 1927
TaiI	ACGT	2 cut(s)	709, 900
TaqI	TCGA	5 cut(s)	449, 630, 761, 766, 1215
TatI	WGTACW	2 cut(s)	700, 1782
TauI	GCSGC	2 cut(s)	778, 2086
TfiI	GAWTC	2 cut(s)	214, 763
Tru1I	TTAA	2 cut(s)	2057, 2226
Tru9I	TTAA	2 cut(s)	2057, 2226
TscAI	CASTG	8 cut(s)	777, 1001, 1423, 1546, 1622, 1981, 2070, 2146
TseFI	GTSAC	2 cut(s)	295, 905
TseI	GCWGC	4 cut(s)	921, 1262, 1322, 1679
Tsp45I	GTSAC	2 cut(s)	295, 905
TspGWI	ACGGA	2 cut(s)	1092, 1957
TspRI	CASTG	8 cut(s)	777, 1001, 1423, 1546, 1622, 1981, 2070, 2146
Van91I	CCANNNNNTGG	1 cut(s)	1846
VpaK11BI	GGWCC	2 cut(s)	147, 1505
XapI	RAATTY	6 cut(s)	572, 1080, 1089, 1247, 1997, 2205
XceI	RCATGY	4 cut(s)	393, 892, 913, 1303
XmiI	GTMKAC	1 cut(s)	285
XmnI	GAANNNNTTC	1 cut(s)	1247
XspI	CTAG	2 cut(s)	386, 1484
Zsp2I	ATGCAT	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.