Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004188.1

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Forward (+)

11970 .. 16142

Gene Structure 4173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004188.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

atggagtttataatccttttcctcctcctgtcactccttgtttatcgtctcctctctttcaacaaccatggtttatcctggtccatcgcatttctctgcgagctctggtttaccttcagttgggccatcaccatcagcaacaaatggaatcttgttgaacataaaccgtacccggaccgtctcttgcaacgggtgcctaaggatgagcttccagcagtggacttgtttgtgaccacagcagacccagagcttgaaccacctatgattaccataaacaccgttctgtctctgttggcagttgattacccaacacacaaactagcatgctatgtttctgatgatgggtgttcccccatcaccttctactcacttgtggaagcatcaaagtttgctaagatttgggttcccttttgtaaaaagtacaatgttcaagttagagcaccttttagattcttctccaatgattccacgctttctggaaacaataataatagctcaatggaattcaagcatgaatggaagatagtgaaggatgagtatgagcaacttagcagcaaaatcgaggatgtggtgcgcaaatctatcaatccatctgatattatcgaaggcgacttttctgctttctcaaatgtccaacgtaataatcatccaaccataatcaaggttgtttgggagaacaaagaagcacattcgaatcgatcagtgccacatttagtctatttatccagagaaaaacggccaaagcatccacatcatgccaaagccggggccatgaatgttctgactagagtctctgggttgatgactaatgctccatacatgctaaacgtggactgtgacatgttcgccaacagccagaacattattcttcatgcaatgtgtatgctacttggatcaaagaatgaaaatgaaaatgcgtttgttcagtatcctcaagtcttctatgacggtctgaaggatgatccttttggaaatcagatgacagttttgtggaagtatgtaggacaaggaatttcaggaattcagggacctttttattccggaacaggatgtgttcatagacgaaaagtcatctatggtctatcccccaattatgtgaaagttggagaaacaaatgcagaaagcatgaagcacggtaaatcagccgatgaagagttactcaatgtatttgggaaggaatttaccaaatcagctgctgatgctttaaacgggaaggcagtgtgtccagacatgcttacagaaactattgaggctgcataccaagttgctggtgttggatatgagtatggcacacattggggcaaaaaggtgggatggatgtatggatccacaactgaagatgtgctcactggcctttcaatccataacaaaggttggagatccattatttatgcacctaacccaccagcctttctaggatgtgcacctaccggtgggcctgctgcaatgacccaacaaaaaaggtgggccaccggcctgcttgaaatcctcctcagcaaaaacttccccatatttggcactctctttgcaaacctccagttcaggcagtgcttggcctacttctggatcctttcatgggggctacgctcagttcccgagctgtgctatgctgctttgccagcctatagtatcatcaccaactcacacttcttgcccaagggccaagaaccagcttactatatactcatagctgtgtttctgatctacaatatgtacactttatcagagtaccttagaaccagtctatcaatccgagcatggtggaataaccaaagaatgggaagaataaccacaatgagtgcatggctttttggacttcttggtgtcatactcaaactcttgggcatatccgagacagtctttgaagtaacacggaaagaccaatctacttcaagtgatcaaggcgctgaagatactgaagccggaaaattcacctttgaccagtcccctattttcgtacctcccacagcaatgttgcttctgcaattaacagccctggccaccgctttgttgcggcttcaaccaccggcccatgatggggtgggatcaggctctttggagaccatgtgcactgtttcgttagtggtatgcttatggccatttttgaaaggtctgtttggatcaggaaagtatggaattcctctatctaccatatttaaatctgttggtcttgcactactcttctacaccttgtgcagatattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

734

Amino Acids

82.38

Weight (kDa)

7.84

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	11
Acc16I	TGCGCA	1 cut(s)	575
AccB1I	GGYRCC	1 cut(s)	193
AccB7I	CCANNNNNTGG	1 cut(s)	1777
AccIII	TCCGGA	1 cut(s)	1040
AciI	CCGC	2 cut(s)	2004, 2014
AclWI	GGATC	9 cut(s)	901, 956, 1320, 1333, 1374, 1561, 1574, 2053, 2128
AcoI	YGGCCR	3 cut(s)	737, 1998, 2096
AcsI	RAATTY	6 cut(s)	503, 1011, 1020, 1178, 1928, 2136
AcuI	CTGAAG	5 cut(s)	100, 974, 1356, 1929, 1938
AdeI	CACNNNGTG	1 cut(s)	2193
AfaI	GTAC	5 cut(s)	170, 422, 1715, 1730, 1959
AfiI	CCNNNNNNNGG	9 cut(s)	120, 765, 1433, 1514, 1563, 1576, 1777, 2037, 2038
AflIII	ACRYGT	1 cut(s)	840
AgeI	ACCGGT	1 cut(s)	1430
AhdI	GACNNNNNGTC	1 cut(s)	1067
AjnI	CCWGG	2 cut(s)	77, 1995
AjuI	GAANNNNNNNTTGG	2 cut(s)	1631, 1663
AluBI	AGCT	8 cut(s)	103, 208, 250, 495, 1193, 1600, 1673, 1691
AluI	AGCT	8 cut(s)	103, 208, 250, 495, 1193, 1600, 1673, 1691
Alw21I	GWGCWC	5 cut(s)	105, 442, 1347, 1426, 2072
Alw26I	GTCTC	6 cut(s)	53, 185, 291, 796, 1847, 2054
Alw44I	GTGCAC	2 cut(s)	1422, 2068
AlwI	GGATC	9 cut(s)	901, 956, 1320, 1333, 1374, 1561, 1574, 2053, 2128
AlwNI	CAGNNNCTG	1 cut(s)	1196
Ama87I	CYCGRG	1 cut(s)	1595
Aor13HI	TCCGGA	1 cut(s)	1040
ApaLI	GTGCAC	2 cut(s)	1422, 2068
ApeKI	GCWGC	5 cut(s)	552, 1193, 1253, 1442, 1610
ApoI	RAATTY	6 cut(s)	503, 1011, 1020, 1178, 1928, 2136
AsiGI	ACCGGT	1 cut(s)	1430
AspLEI	GCGC	2 cut(s)	576, 1907
AspS9I	GGNCC	9 cut(s)	81, 123, 175, 768, 1028, 1436, 1467, 1660, 2029
AsuC2I	CCSGG	2 cut(s)	173, 766
AsuHPI	GGTGA	4 cut(s)	121, 349, 1627, 1924
AsuII	TTCGAA	1 cut(s)	692
AvaI	CYCGRG	1 cut(s)	1595
AvaII	GGWCC	3 cut(s)	81, 175, 1028
AxyI	CCTNAGG	1 cut(s)	198
BaeGI	GKGCMC	2 cut(s)	1426, 2072
BalI	TGGCCA	2 cut(s)	2000, 2098
BamHI	GGATCC	2 cut(s)	1325, 1566
BanI	GGYRCC	1 cut(s)	193
BanII	GRGCYC	1 cut(s)	105
BbsI	GAAGAC	1 cut(s)	931
Bbv12I	GWGCWC	5 cut(s)	105, 442, 1347, 1426, 2072
BbvCI	CCTCAGC	1 cut(s)	1493
BbvI	GCAGC	5 cut(s)	564, 1180, 1240, 1429, 1597
BccI	CCATC	8 cut(s)	92, 134, 140, 335, 362, 598, 1308, 2030
BceAI	ACGGC	1 cut(s)	752
BcgI	CGANNNNNNTGC	4 cut(s)	541, 575, 599, 633
BciT130I	CCWGG	2 cut(s)	79, 1997
BciVI	GTATCC	1 cut(s)	939
BclI	TGATCA	1 cut(s)	1897
BcnI	CCSGG	2 cut(s)	173, 766
BcoDI	GTCTC	6 cut(s)	53, 185, 291, 796, 1847, 2054
BfaI	CTAG	3 cut(s)	320, 786, 1415
BfmI	CTRYAG	1 cut(s)	1624
BfoI	RGCGCY	1 cut(s)	1908
BfuI	GTATCC	1 cut(s)	939
BisI	GCNGC	6 cut(s)	553, 1194, 1254, 1443, 1611, 2015
BlsI	GCNGC	6 cut(s)	554, 1195, 1255, 1444, 1612, 2016
Bme1390I	CCNGG	4 cut(s)	79, 173, 766, 1997
Bme18I	GGWCC	3 cut(s)	81, 175, 1028
BmeRI	GACNNNNNGTC	1 cut(s)	1067
BmeT110I	CYCGRG	1 cut(s)	1595
BmgT120I	GGNCC	9 cut(s)	81, 123, 175, 768, 1028, 1436, 1467, 1660, 2029
BmiI	GGNNCC	6 cut(s)	195, 405, 769, 1029, 1327, 1568
BmrFI	CCNGG	4 cut(s)	79, 173, 766, 1997
BmsI	GCATC	3 cut(s)	389, 754, 1189
BoxI	GACNNNNGTC	1 cut(s)	788
BpiI	GAAGAC	1 cut(s)	931
BpmI	CTGGAG	1 cut(s)	1520
Bpu10I	CCTNAGC	1 cut(s)	1493
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	1 cut(s)	918
BpuMI	CCSGG	2 cut(s)	173, 766
Bsa29I	ATCGAT	1 cut(s)	697
BsaI	GGTCTC	1 cut(s)	2054
BsaJI	CCNNGG	4 cut(s)	67, 765, 1656, 1995
BsaWI	WCCGGW	2 cut(s)	1040, 1430
BsaXI	ACNNNNNCTCC	4 cut(s)	796, 826, 2051, 2081
Bsc4I	CCNNNNNNNGG	9 cut(s)	120, 765, 1433, 1514, 1563, 1576, 1777, 2037, 2038
Bse118I	RCCGGY	3 cut(s)	1430, 1472, 2026
Bse1I	ACTGG	4 cut(s)	1354, 1537, 1740, 1942
Bse21I	CCTNAGG	1 cut(s)	198
Bse3DI	GCAATG	3 cut(s)	882, 1452, 1977
BseAI	TCCGGA	1 cut(s)	1040
BseBI	CCWGG	2 cut(s)	79, 1997
BseCI	ATCGAT	1 cut(s)	697
BseDI	CCNNGG	4 cut(s)	67, 765, 1656, 1995
BseLI	CCNNNNNNNGG	9 cut(s)	120, 765, 1433, 1514, 1563, 1576, 1777, 2037, 2038
BseMI	GCAATG	3 cut(s)	882, 1452, 1977
BseMII	CTCAG	2 cut(s)	1507, 1602
BseNI	ACTGG	4 cut(s)	1354, 1537, 1740, 1942
BseRI	GAGGAG	3 cut(s)	14, 41, 1481
BseSI	GKGCMC	2 cut(s)	1426, 2072
BseXI	GCAGC	5 cut(s)	564, 1180, 1240, 1429, 1597
BshNI	GGYRCC	1 cut(s)	193
BshTI	ACCGGT	1 cut(s)	1430
BshVI	ATCGAT	1 cut(s)	697
BsiHKAI	GWGCWC	5 cut(s)	105, 442, 1347, 1426, 2072
BsiHKCI	CYCGRG	1 cut(s)	1595
BsiSI	CCGG	7 cut(s)	173, 765, 1041, 1431, 1473, 1923, 2027
BslFI	GGGAC	2 cut(s)	1041, 1930
BslI	CCNNNNNNNGG	9 cut(s)	120, 765, 1433, 1514, 1563, 1576, 1777, 2037, 2038
BsmAI	GTCTC	6 cut(s)	53, 185, 291, 796, 1847, 2054
BsmBI	CGTCTC	2 cut(s)	53, 185
BsmFI	GGGAC	2 cut(s)	1041, 1930
Bso31I	GGTCTC	1 cut(s)	2054
BsoBI	CYCGRG	1 cut(s)	1595
Bsp119I	TTCGAA	1 cut(s)	692
Bsp1286I	GDGCHC	5 cut(s)	105, 442, 1347, 1426, 2072
Bsp13I	TCCGGA	1 cut(s)	1040
Bsp1407I	TGTACA	1 cut(s)	1713
Bsp19I	CCATGG	1 cut(s)	67
BspACI	CCGC	2 cut(s)	2004, 2014
BspCNI	CTCAG	2 cut(s)	1506, 1601
BspDI	ATCGAT	1 cut(s)	697
BspEI	TCCGGA	1 cut(s)	1040
BspLI	GGNNCC	6 cut(s)	195, 405, 769, 1029, 1327, 1568
BspPI	GGATC	9 cut(s)	901, 956, 1320, 1333, 1374, 1561, 1574, 2053, 2128
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	193
BspTNI	GGTCTC	1 cut(s)	2054
BsrDI	GCAATG	3 cut(s)	882, 1452, 1977
BsrFI	RCCGGY	3 cut(s)	1430, 1472, 2026
BsrGI	TGTACA	1 cut(s)	1713
BsrI	ACTGG	4 cut(s)	1354, 1537, 1740, 1942
BssAI	RCCGGY	3 cut(s)	1430, 1472, 2026
BssECI	CCNNGG	4 cut(s)	67, 765, 1656, 1995
BssT1I	CCWWGG	2 cut(s)	67, 1656
Bst2UI	CCWGG	2 cut(s)	79, 1997
Bst4CI	ACNGT	9 cut(s)	168, 179, 280, 836, 950, 985, 1136, 1858, 2074
Bst6I	CTCTTC	2 cut(s)	1146, 2186
BstAPI	GCANNNNNTGC	1 cut(s)	193
BstAUI	TGTACA	1 cut(s)	1713
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	5 cut(s)	101, 325, 1440, 1478, 1620
BstDEI	CTNAG	6 cut(s)	198, 393, 548, 1493, 1588, 1733
BstDSI	CCRYGG	1 cut(s)	67
BstH2I	RGCGCY	1 cut(s)	1908
BstHHI	GCGC	2 cut(s)	576, 1907
BstMAI	GTCTC	6 cut(s)	53, 185, 291, 796, 1847, 2054
BstMWI	GCNNNNNNNGC	3 cut(s)	193, 1199, 1619
BstNI	CCWGG	2 cut(s)	79, 1997
BstNSI	RCATGY	4 cut(s)	327, 823, 844, 1234
BstPAI	GACNNNNGTC	1 cut(s)	788
BstSCI	CCNGG	4 cut(s)	77, 171, 764, 1995
BstSFI	CTRYAG	1 cut(s)	1624
BstSLI	GKGCMC	2 cut(s)	1426, 2072
BstV1I	GCAGC	5 cut(s)	564, 1180, 1240, 1429, 1597
BstV2I	GAAGAC	1 cut(s)	931
BstX2I	RGATCY	3 cut(s)	1325, 1379, 1566
BstXI	CCANNNNNNTGG	1 cut(s)	1268
BstYI	RGATCY	3 cut(s)	1325, 1379, 1566
Bsu15I	ATCGAT	1 cut(s)	697
Bsu36I	CCTNAGG	1 cut(s)	198
BsuI	GTATCC	1 cut(s)	939
BsuTUI	ATCGAT	1 cut(s)	697
BtgI	CCRYGG	1 cut(s)	67
BtgZI	GCGATG	1 cut(s)	70
BtsI	GCAGTG	3 cut(s)	222, 1224, 1553
BtsIMutI	CAGTG	6 cut(s)	222, 708, 1224, 1347, 1553, 2070
Cac8I	GCNNGC	5 cut(s)	101, 325, 1440, 1478, 1620
CaiI	CAGNNNCTG	1 cut(s)	1196
CfoI	GCGC	2 cut(s)	576, 1907
Cfr10I	RCCGGY	3 cut(s)	1430, 1472, 2026
Cfr13I	GGNCC	9 cut(s)	81, 123, 175, 768, 1028, 1436, 1467, 1660, 2029
ClaI	ATCGAT	1 cut(s)	697
CpoI	CGGWCCG	1 cut(s)	175
Csp6I	GTAC	5 cut(s)	169, 421, 1714, 1729, 1958
CspAI	ACCGGT	1 cut(s)	1430
CspCI	CAANNNNNGTGG	2 cut(s)	1445, 1480
CspI	CGGWCCG	1 cut(s)	175
CviQI	GTAC	5 cut(s)	169, 421, 1714, 1729, 1958
DdeI	CTNAG	6 cut(s)	198, 393, 548, 1493, 1588, 1733
DraI	TTTAAA	2 cut(s)	1206, 2158
DraIII	CACNNNGTG	1 cut(s)	2193
DriI	GACNNNNNGTC	1 cut(s)	1067
EaeI	YGGCCR	3 cut(s)	737, 1998, 2096
Eam1104I	CTCTTC	2 cut(s)	1146, 2186
Eam1105I	GACNNNNNGTC	1 cut(s)	1067
EarI	CTCTTC	2 cut(s)	1146, 2186
Ecl136II	GAGCTC	1 cut(s)	103
Eco130I	CCWWGG	2 cut(s)	67, 1656
Eco24I	GRGCYC	1 cut(s)	105
Eco31I	GGTCTC	1 cut(s)	2054
Eco47I	GGWCC	3 cut(s)	81, 175, 1028
Eco53kI	GAGCTC	1 cut(s)	103
Eco57I	CTGAAG	5 cut(s)	100, 974, 1356, 1929, 1938
Eco81I	CCTNAGG	1 cut(s)	198
Eco88I	CYCGRG	1 cut(s)	1595
EcoICRI	GAGCTC	1 cut(s)	103
EcoO109I	RGGNCCY	1 cut(s)	1028
EcoRI	GAATTC	3 cut(s)	503, 1020, 2136
EcoRII	CCWGG	2 cut(s)	77, 1995
EcoT14I	CCWWGG	2 cut(s)	67, 1656
EcoT38I	GRGCYC	1 cut(s)	105
ErhI	CCWWGG	2 cut(s)	67, 1656
Esp3I	CGTCTC	2 cut(s)	53, 185
FaqI	GGGAC	2 cut(s)	1041, 1930
FbaI	TGATCA	1 cut(s)	1897
Fnu4HI	GCNGC	6 cut(s)	553, 1194, 1254, 1443, 1611, 2015
FriOI	GRGCYC	1 cut(s)	105
Fsp4HI	GCNGC	6 cut(s)	553, 1194, 1254, 1443, 1611, 2015
FspBI	CTAG	3 cut(s)	320, 786, 1415
FspI	TGCGCA	1 cut(s)	575
GlaI	GCGC	2 cut(s)	575, 1906
GluI	GCNGC	6 cut(s)	553, 1194, 1254, 1443, 1611, 2015
GsuI	CTGGAG	1 cut(s)	1520
HaeII	RGCGCY	1 cut(s)	1908
HapII	CCGG	7 cut(s)	173, 765, 1041, 1431, 1473, 1923, 2027
HhaI	GCGC	2 cut(s)	576, 1907
Hin6I	GCGC	2 cut(s)	574, 1905
HinP1I	GCGC	2 cut(s)	574, 1905
HinfI	GANTC	5 cut(s)	148, 450, 464, 694, 789
HpaII	CCGG	7 cut(s)	173, 765, 1041, 1431, 1473, 1923, 2027
HphI	GGTGA	4 cut(s)	121, 349, 1627, 1924
Hpy166II	GTNNAC	6 cut(s)	111, 220, 832, 1424, 1716, 2070
Hpy188I	TCNGA	9 cut(s)	337, 595, 783, 954, 978, 1701, 1726, 1754, 1852
Hpy188III	TCNNGA	8 cut(s)	477, 726, 1017, 1041, 1226, 1564, 1595, 2124
Hpy8I	GTNNAC	6 cut(s)	111, 220, 832, 1424, 1716, 2070
HpyAV	CCTTC	7 cut(s)	124, 370, 523, 599, 949, 1168, 1207
HpyCH4III	ACNGT	9 cut(s)	168, 179, 280, 836, 950, 985, 1136, 1858, 2074
HpyCH4IV	ACGT	2 cut(s)	637, 828
HpyF10VI	GCNNNNNNNGC	3 cut(s)	193, 1199, 1619
HpyF3I	CTNAG	6 cut(s)	198, 393, 548, 1493, 1588, 1733
HpySE526I	ACGT	2 cut(s)	637, 828
HspAI	GCGC	2 cut(s)	574, 1905
Kpn2I	TCCGGA	1 cut(s)	1040
Ksp22I	TGATCA	1 cut(s)	1897
LmnI	GCTCC	1 cut(s)	817
Lsp1109I	GCAGC	5 cut(s)	564, 1180, 1240, 1429, 1597
LweI	GCATC	3 cut(s)	389, 754, 1189
MaeI	CTAG	3 cut(s)	320, 786, 1415
MaeII	ACGT	2 cut(s)	637, 828
MaeIII	GTNAC	5 cut(s)	30, 229, 836, 1155, 1867
MboII	GAAGA	9 cut(s)	445, 532, 860, 931, 1163, 1349, 1794, 1922, 2173
MflI	RGATCY	3 cut(s)	1325, 1379, 1566
MhlI	GDGCHC	5 cut(s)	105, 442, 1347, 1426, 2072
MlsI	TGGCCA	2 cut(s)	2000, 2098
MluCI	AATT	8 cut(s)	503, 1011, 1020, 1090, 1178, 1928, 1985, 2136
MluNI	TGGCCA	2 cut(s)	2000, 2098
MlyI	GAGTC	1 cut(s)	798
MmeI	TCCRAC	5 cut(s)	658, 674, 1084, 1255, 1355
Mox20I	TGGCCA	2 cut(s)	2000, 2098
MroI	TCCGGA	1 cut(s)	1040
MscI	TGGCCA	2 cut(s)	2000, 2098
MseI	TTAA	3 cut(s)	1205, 1988, 2157
MslI	CAYNNNNRTG	2 cut(s)	1691, 1970
Msp20I	TGGCCA	2 cut(s)	2000, 2098
MspA1I	CMGCKG	1 cut(s)	1193
MspI	CCGG	7 cut(s)	173, 765, 1041, 1431, 1473, 1923, 2027
MspR9I	CCNGG	4 cut(s)	79, 173, 766, 1997
MvaI	CCWGG	2 cut(s)	79, 1997
MwoI	GCNNNNNNNGC	3 cut(s)	193, 1199, 1619
NciI	CCSGG	2 cut(s)	173, 766
NcoI	CCATGG	1 cut(s)	67
NlaIV	GGNNCC	6 cut(s)	195, 405, 769, 1029, 1327, 1568
NmuCI	GTSAC	3 cut(s)	30, 229, 836
NsbI	TGCGCA	1 cut(s)	575
NspI	RCATGY	4 cut(s)	327, 823, 844, 1234
NspV	TTCGAA	1 cut(s)	692
PaeI	GCATGC	1 cut(s)	327
PciI	ACATGT	1 cut(s)	840
PfeI	GAWTC	4 cut(s)	148, 450, 464, 694
PflMI	CCANNNNNTGG	1 cut(s)	1777
PinAI	ACCGGT	1 cut(s)	1430
PkrI	GCNGC	6 cut(s)	554, 1195, 1255, 1444, 1612, 2016
PleI	GAGTC	1 cut(s)	797
PpsI	GAGTC	1 cut(s)	797
PpuMI	RGGWCCY	1 cut(s)	1028
PscI	ACATGT	1 cut(s)	840
PshAI	GACNNNNGTC	1 cut(s)	788
PsiI	TTATAA	1 cut(s)	11
Psp124BI	GAGCTC	1 cut(s)	105
Psp5II	RGGWCCY	1 cut(s)	1028
Psp6I	CCWGG	2 cut(s)	77, 1995
PspGI	CCWGG	2 cut(s)	77, 1995
PspN4I	GGNNCC	6 cut(s)	195, 405, 769, 1029, 1327, 1568
PspPI	GGNCC	9 cut(s)	81, 123, 175, 768, 1028, 1436, 1467, 1660, 2029
PspPPI	RGGWCCY	1 cut(s)	1028
PstNI	CAGNNNCTG	1 cut(s)	1196
PsuI	RGATCY	3 cut(s)	1325, 1379, 1566
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	5 cut(s)	170, 422, 1715, 1730, 1959
RsaNI	GTAC	5 cut(s)	169, 421, 1714, 1729, 1958
RseI	CAYNNNNRTG	2 cut(s)	1691, 1970
Rsr2I	CGGWCCG	1 cut(s)	175
RsrII	CGGWCCG	1 cut(s)	175
SacI	GAGCTC	1 cut(s)	105
SaqAI	TTAA	3 cut(s)	1205, 1988, 2157
SatI	GCNGC	6 cut(s)	553, 1194, 1254, 1443, 1611, 2015
Sau96I	GGNCC	9 cut(s)	81, 123, 175, 768, 1028, 1436, 1467, 1660, 2029
SchI	GAGTC	1 cut(s)	798
ScrFI	CCNGG	4 cut(s)	79, 173, 766, 1997
SduI	GDGCHC	5 cut(s)	105, 442, 1347, 1426, 2072
SfaNI	GCATC	3 cut(s)	389, 754, 1189
SfcI	CTRYAG	1 cut(s)	1624
SfuI	TTCGAA	1 cut(s)	692
SinI	GGWCC	3 cut(s)	81, 175, 1028
SmiI	ATTTAAAT	1 cut(s)	2158
SmiMI	CAYNNNNRTG	2 cut(s)	1691, 1970
SmlI	CTYRAG	1 cut(s)	933
SmoI	CTYRAG	1 cut(s)	933
SphI	GCATGC	1 cut(s)	327
Sse9I	AATT	8 cut(s)	503, 1011, 1020, 1090, 1178, 1928, 1985, 2136
SsiI	CCGC	2 cut(s)	2004, 2014
SspMI	CTAG	3 cut(s)	320, 786, 1415
SstI	GAGCTC	1 cut(s)	105
StyD4I	CCNGG	4 cut(s)	77, 171, 764, 1995
StyI	CCWWGG	2 cut(s)	67, 1656
SwaI	ATTTAAAT	1 cut(s)	2158
TaaI	ACNGT	9 cut(s)	168, 179, 280, 836, 950, 985, 1136, 1858, 2074
TaiI	ACGT	2 cut(s)	640, 831
TaqI	TCGA	4 cut(s)	561, 603, 692, 697
TasI	AATT	8 cut(s)	503, 1011, 1020, 1090, 1178, 1928, 1985, 2136
TatI	WGTACW	2 cut(s)	420, 1713
TauI	GCSGC	1 cut(s)	2017
TfiI	GAWTC	4 cut(s)	148, 450, 464, 694
Tru1I	TTAA	3 cut(s)	1205, 1988, 2157
Tru9I	TTAA	3 cut(s)	1205, 1988, 2157
TscAI	CASTG	6 cut(s)	222, 708, 1224, 1354, 1553, 2077
TseFI	GTSAC	3 cut(s)	30, 229, 836
TseI	GCWGC	5 cut(s)	552, 1193, 1253, 1442, 1610
Tsp45I	GTSAC	3 cut(s)	30, 229, 836
TspDTI	ATGAA	9 cut(s)	528, 788, 860, 918, 924, 1046, 1142, 1164, 1563
TspGWI	ACGGA	1 cut(s)	1888
TspRI	CASTG	6 cut(s)	222, 708, 1224, 1354, 1553, 2077
Van91I	CCANNNNNTGG	1 cut(s)	1777
VneI	GTGCAC	2 cut(s)	1422, 2068
VpaK11BI	GGWCC	3 cut(s)	81, 175, 1028
XapI	RAATTY	6 cut(s)	503, 1011, 1020, 1178, 1928, 2136
XceI	RCATGY	4 cut(s)	327, 823, 844, 1234
XspI	CTAG	3 cut(s)	320, 786, 1415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.