Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

76589434 .. 76593715

Gene Structure 4282 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG538000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGCCAACTCAAACTCTCTTGAGTCTCTTCATCTCTATGAAAAGGTTGAGCTTAGAAACACACTACATAAAGTCATGGAGTTTATAATCCTCTTCCTCCTCCTTTCACTCCTTGTTTATCGTCTCCTCTCATTCAACAACCATAAATTATCCCGGTCCATCGCATTTCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATGAGCAACAAATGGAATCTTGTTGACCATAAACCATACCCCGACCGCCTCTTGCAACGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCATAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCGAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCACCAATAATTCCAAGCTTTCTGGAAATAATAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGATGGTGAAGGATGAGTACGAGCAACTTAGTAGCAAAATCGAGGATGTGGTGCGCAAATCTGTCAATCCATCTGACATTATTGAAGGCGACTTTTTAGTTTTCTCAAATGTACAACGTAATAATCATCCAACAATAATCAAGGTTGTATGGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCGCATTTAGTATATATATCCAGAGAAAAACGGCCAAAGCGTCCACATCATGCCAAAGCTGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACTAATGCTCCATACATGCTAAACGTGGACTGTGACATGTTCGCCAGCAGCCCGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTCTTCTATGGTGGTCTAAAGGATGATCCTTTCGGAAATCAGATGGTAGTTTTGTGGAAGTATGTAGCGCACGGAATTTCAGGAATTCAGGGGCCTTTTTATTCCGGAACAGGATGTGTTCATAGACGAAGAGTCATCTATGGTCTATCCCCCAATTATGTGAAAGTCGGAGAAACAAATGCAAAAAGCATGATGCACGGTAAATCAGTCGATGAAGAACTACTTGATATGTTTGGGAAGGAATTCACCAGATCAGCTGCTGATGCTTTGAACGGGAAGGCAGAGTGTTCTAACATGCTTACGAAAACTATTGAGGCTGCTTACTTAGTAGCTGGTGTTGGATATGAGTATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCCACAACTGAAGATATCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTCTTTATGCACCAGATCCACCAGCCTTTCTAGGATGCGCACCTACTGGTGGACCTGCTTCAATGACCCAACAAAAAAGGTGGGCCACTGGACTACTTGAAATCCTCCTCAGCAAAAACTGCCCCATATTTGGCACTCTCTTTGCAAACCTCCAGTTCAGGCAGTGCTTGGCCTACTTCTGGATCCTTTCATGGGGCCTACGCTCAGTTCCCGAGCTGTGCTATGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCCAAGGGCCAAGAACCAGCTTACTATATACCCATATCTGTGTTTCTGTTCTATAATTTGTACACTTTATTAGAGCACCTTAGAACCAGTCTATCAATCCGAGCATGGTGGAACAACCAAAGAATGGGAAGAATAACCACAATGAGTGCATGGCTTTTTGGATTTCTTGGTGTCATACTCAAACTTTTGGGCATATCCGAGACAGTCTTTGAAGTAACACGGAAAGACCAATCTACTTCAACGGATGAAGGCACTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCGTACCTCCCACAACAATGTTGTTTATGCAATTAACAGCACTGGCCACCGCTTTGTTGCGGCTTCAACCACCTACCCGTGATGGGGTGGGATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTGGTGGTATGCTTATTACCATTTTTGAAAGGTCTGTTTGGATCAGGAAAATATGGAATTCCTCTGTCTACCATATTTAAGTCTGCTGGTCTTGCACTACTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

760

Amino Acids

85.64

Weight (kDa)

8.58

Isoelectric Point (pI)

41.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 397	1.2e-86	Cellulose synthase
Cellulose_synt	PF03552	435 - 736	4e-53	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	86
Acc16I	TGCGCA	2 cut(s)	653, 1501
Acc36I	ACCTGC	1 cut(s)	1525
AccB1I	GGYRCC	1 cut(s)	268
AccB7I	CCANNNNNTGG	1 cut(s)	1855
AccI	GTMKAC	2 cut(s)	294, 2225
AccIII	TCCGGA	1 cut(s)	1118
AciI	CCGC	4 cut(s)	253, 785, 2082, 2092
AcoI	YGGCCR	3 cut(s)	3, 815, 2076
AcsI	RAATTY	6 cut(s)	581, 1089, 1098, 1256, 2006, 2214
AcuI	CTGAAG	4 cut(s)	175, 1434, 2007, 2016
AdeI	CACNNNGTG	1 cut(s)	2271
AfaI	GTAC	5 cut(s)	497, 617, 711, 1793, 2037
AfiI	CCNNNNNNNGG	9 cut(s)	195, 843, 1511, 1592, 1641, 1654, 1855, 2115, 2116
AflIII	ACRYGT	1 cut(s)	918
AhdI	GACNNNNNGTC	1 cut(s)	1145
AjuI	GAANNNNNNNTTGG	2 cut(s)	1709, 1741
Alw21I	GWGCWC	3 cut(s)	180, 517, 1809
Alw26I	GTCTC	6 cut(s)	30, 128, 366, 874, 1925, 2132
AlwNI	CAGNNNCTG	1 cut(s)	1274
Ama87I	CYCGRG	1 cut(s)	1673
Aor13HI	TCCGGA	1 cut(s)	1118
AoxI	GGCC	9 cut(s)	3, 815, 846, 1106, 1545, 1632, 1657, 1738, 2076
ApeKI	GCWGC	4 cut(s)	930, 1271, 1331, 1688
ApoI	RAATTY	6 cut(s)	581, 1089, 1098, 1256, 2006, 2214
Asp700I	GAANNNNTTC	1 cut(s)	1256
AspLEI	GCGC	3 cut(s)	654, 1084, 1502
AspS9I	GGNCC	7 cut(s)	156, 846, 1106, 1514, 1545, 1657, 1738
AsuC2I	CCSGG	1 cut(s)	154
AsuHPI	GGTGA	7 cut(s)	196, 424, 523, 616, 1252, 1705, 2002
AsuII	TTCGAA	1 cut(s)	770
AvaI	CYCGRG	1 cut(s)	1673
AvaII	GGWCC	2 cut(s)	156, 1514
AxyI	CCTNAGG	1 cut(s)	273
BalI	TGGCCA	2 cut(s)	5, 2078
BamHI	GGATCC	2 cut(s)	1403, 1644
BanI	GGYRCC	1 cut(s)	268
BanII	GRGCYC	2 cut(s)	180, 517
BarI	GAAGNNNNNNTAC	2 cut(s)	599, 631
BbsI	GAAGAC	1 cut(s)	1009
Bbv12I	GWGCWC	3 cut(s)	180, 517, 1809
BbvCI	CCTCAGC	1 cut(s)	1571
BbvI	GCAGC	4 cut(s)	942, 1258, 1318, 1675
BccI	CCATC	7 cut(s)	167, 410, 595, 676, 1051, 1386, 2108
BceAI	ACGGC	1 cut(s)	830
BcnI	CCSGG	1 cut(s)	154
BcoDI	GTCTC	6 cut(s)	30, 128, 366, 874, 1925, 2132
BfaI	CTAG	3 cut(s)	395, 864, 1493
BfmI	CTRYAG	1 cut(s)	1702
BfuAI	ACCTGC	1 cut(s)	1525
BisI	GCNGC	6 cut(s)	785, 931, 1272, 1332, 1689, 2093
BlsI	GCNGC	6 cut(s)	786, 932, 1273, 1333, 1690, 2094
Bme1390I	CCNGG	1 cut(s)	154
Bme18I	GGWCC	2 cut(s)	156, 1514
BmeRI	GACNNNNNGTC	1 cut(s)	1145
BmeT110I	CYCGRG	1 cut(s)	1673
BmgT120I	GGNCC	7 cut(s)	156, 846, 1106, 1514, 1545, 1657, 1738
BmiI	GGNNCC	7 cut(s)	270, 480, 847, 1107, 1405, 1646, 1658
BmrFI	CCNGG	1 cut(s)	154
BmrI	ACTGGG	2 cut(s)	1437, 2021
BmsI	GCATC	4 cut(s)	464, 1197, 1267, 1487
BmuI	ACTGGG	2 cut(s)	1437, 2021
BoxI	GACNNNNGTC	1 cut(s)	866
BpiI	GAAGAC	1 cut(s)	1009
BpmI	CTGGAG	1 cut(s)	1598
Bpu10I	CCTNAGC	1 cut(s)	1571
Bpu14I	TTCGAA	1 cut(s)	770
BpuEI	CTTGAG	2 cut(s)	41, 996
BpuMI	CCSGG	1 cut(s)	154
Bsa29I	ATCGAT	1 cut(s)	775
BsaI	GGTCTC	1 cut(s)	2132
BsaJI	CCNNGG	1 cut(s)	1734
BsaWI	WCCGGW	1 cut(s)	1118
BsaXI	ACNNNNNCTCC	4 cut(s)	874, 904, 2129, 2159
Bsc4I	CCNNNNNNNGG	9 cut(s)	195, 843, 1511, 1592, 1641, 1654, 1855, 2115, 2116
Bse1I	ACTGG	8 cut(s)	1432, 1513, 1555, 1615, 1818, 2020, 2027, 2079
Bse21I	CCTNAGG	1 cut(s)	273
Bse3DI	GCAATG	1 cut(s)	960
BseAI	TCCGGA	1 cut(s)	1118
BseCI	ATCGAT	1 cut(s)	775
BseDI	CCNNGG	1 cut(s)	1734
BseLI	CCNNNNNNNGG	9 cut(s)	195, 843, 1511, 1592, 1641, 1654, 1855, 2115, 2116
BseMI	GCAATG	1 cut(s)	960
BseMII	CTCAG	2 cut(s)	1585, 1680
BseNI	ACTGG	8 cut(s)	1432, 1513, 1555, 1615, 1818, 2020, 2027, 2079
BseRI	GAGGAG	3 cut(s)	89, 116, 1559
BseXI	GCAGC	4 cut(s)	942, 1258, 1318, 1675
BseYI	CCCAGC	1 cut(s)	842
BsgI	GTGCAG	1 cut(s)	2167
Bsh1285I	CGRYCG	1 cut(s)	253
BshFI	GGCC	9 cut(s)	5, 817, 848, 1108, 1547, 1634, 1659, 1740, 2078
BshNI	GGYRCC	1 cut(s)	268
BshVI	ATCGAT	1 cut(s)	775
BsiEI	CGRYCG	1 cut(s)	253
BsiHKAI	GWGCWC	3 cut(s)	180, 517, 1809
BsiHKCI	CYCGRG	1 cut(s)	1673
BsiSI	CCGG	3 cut(s)	154, 1119, 2001
BslFI	GGGAC	1 cut(s)	2008
BslI	CCNNNNNNNGG	9 cut(s)	195, 843, 1511, 1592, 1641, 1654, 1855, 2115, 2116
BsmAI	GTCTC	6 cut(s)	30, 128, 366, 874, 1925, 2132
BsmBI	CGTCTC	1 cut(s)	128
BsmFI	GGGAC	1 cut(s)	2008
BsnI	GGCC	9 cut(s)	5, 817, 848, 1108, 1547, 1634, 1659, 1740, 2078
Bso31I	GGTCTC	1 cut(s)	2132
BsoBI	CYCGRG	1 cut(s)	1673
Bsp119I	TTCGAA	1 cut(s)	770
Bsp1286I	GDGCHC	3 cut(s)	180, 517, 1809
Bsp13I	TCCGGA	1 cut(s)	1118
Bsp1407I	TGTACA	2 cut(s)	709, 1791
BspACI	CCGC	4 cut(s)	253, 785, 2082, 2092
BspANI	GGCC	9 cut(s)	5, 817, 848, 1108, 1547, 1634, 1659, 1740, 2078
BspCNI	CTCAG	2 cut(s)	1584, 1679
BspDI	ATCGAT	1 cut(s)	775
BspEI	TCCGGA	1 cut(s)	1118
BspLI	GGNNCC	7 cut(s)	270, 480, 847, 1107, 1405, 1646, 1658
BspMI	ACCTGC	1 cut(s)	1525
BspT104I	TTCGAA	1 cut(s)	770
BspT107I	GGYRCC	1 cut(s)	268
BspTNI	GGTCTC	1 cut(s)	2132
BsrDI	GCAATG	1 cut(s)	960
BsrGI	TGTACA	2 cut(s)	709, 1791
BsrI	ACTGG	8 cut(s)	1432, 1513, 1555, 1615, 1818, 2020, 2027, 2079
BssECI	CCNNGG	1 cut(s)	1734
BssT1I	CCWWGG	1 cut(s)	1734
Bst4CI	ACNGT	4 cut(s)	355, 914, 1214, 1936
Bst6I	CTCTTC	4 cut(s)	33, 98, 1138, 2264
BstAPI	GCANNNNNTGC	2 cut(s)	268, 1581
BstAUI	TGTACA	2 cut(s)	709, 1791
BstBI	TTCGAA	1 cut(s)	770
BstC8I	GCNNGC	4 cut(s)	176, 400, 928, 1698
BstDEI	CTNAG	8 cut(s)	53, 273, 468, 626, 1339, 1571, 1666, 1811
BstHHI	GCGC	3 cut(s)	654, 1084, 1502
BstMAI	GTCTC	6 cut(s)	30, 128, 366, 874, 1925, 2132
BstMCI	CGRYCG	1 cut(s)	253
BstMWI	GCNNNNNNNGC	5 cut(s)	268, 1277, 1581, 1697, 2249
BstNSI	RCATGY	4 cut(s)	402, 901, 922, 1312
BstPAI	GACNNNNGTC	1 cut(s)	866
BstSCI	CCNGG	1 cut(s)	152
BstSFI	CTRYAG	1 cut(s)	1702
BstV1I	GCAGC	4 cut(s)	942, 1258, 1318, 1675
BstV2I	GAAGAC	1 cut(s)	1009
BstX2I	RGATCY	4 cut(s)	1403, 1457, 1477, 1644
BstYI	RGATCY	4 cut(s)	1403, 1457, 1477, 1644
Bsu15I	ATCGAT	1 cut(s)	775
Bsu36I	CCTNAGG	1 cut(s)	273
BsuRI	GGCC	9 cut(s)	5, 817, 848, 1108, 1547, 1634, 1659, 1740, 2078
BsuTUI	ATCGAT	1 cut(s)	775
BtgZI	GCGATG	1 cut(s)	145
BtsI	GCAGTG	2 cut(s)	1631, 2155
BtsIMutI	CAGTG	8 cut(s)	786, 1010, 1425, 1548, 1631, 1983, 2072, 2155
BveI	ACCTGC	1 cut(s)	1525
Cac8I	GCNNGC	4 cut(s)	176, 400, 928, 1698
CaiI	CAGNNNCTG	1 cut(s)	1274
CfoI	GCGC	3 cut(s)	654, 1084, 1502
Cfr13I	GGNCC	7 cut(s)	156, 846, 1106, 1514, 1545, 1657, 1738
ClaI	ATCGAT	1 cut(s)	775
CseI	GACGC	1 cut(s)	812
Csp6I	GTAC	5 cut(s)	496, 616, 710, 1792, 2036
CspCI	CAANNNNNGTGG	2 cut(s)	1523, 1558
CviQI	GTAC	5 cut(s)	496, 616, 710, 1792, 2036
DdeI	CTNAG	8 cut(s)	53, 273, 468, 626, 1339, 1571, 1666, 1811
DraIII	CACNNNGTG	1 cut(s)	2271
DriI	GACNNNNNGTC	1 cut(s)	1145
EaeI	YGGCCR	3 cut(s)	3, 815, 2076
Eam1104I	CTCTTC	4 cut(s)	33, 98, 1138, 2264
Eam1105I	GACNNNNNGTC	1 cut(s)	1145
EarI	CTCTTC	4 cut(s)	33, 98, 1138, 2264
Ecl136II	GAGCTC	2 cut(s)	178, 515
Eco130I	CCWWGG	1 cut(s)	1734
Eco24I	GRGCYC	2 cut(s)	180, 517
Eco31I	GGTCTC	1 cut(s)	2132
Eco32I	GATATC	1 cut(s)	1420
Eco47I	GGWCC	2 cut(s)	156, 1514
Eco53kI	GAGCTC	2 cut(s)	178, 515
Eco57I	CTGAAG	4 cut(s)	175, 1434, 2007, 2016
Eco81I	CCTNAGG	1 cut(s)	273
Eco88I	CYCGRG	1 cut(s)	1673
EcoICRI	GAGCTC	2 cut(s)	178, 515
EcoO109I	RGGNCCY	2 cut(s)	1106, 1657
EcoRI	GAATTC	4 cut(s)	581, 1098, 1256, 2214
EcoRV	GATATC	1 cut(s)	1420
EcoT14I	CCWWGG	1 cut(s)	1734
EcoT22I	ATGCAT	1 cut(s)	997
EcoT38I	GRGCYC	2 cut(s)	180, 517
ErhI	CCWWGG	1 cut(s)	1734
Esp3I	CGTCTC	1 cut(s)	128
FalI	AAGNNNNNCTT	2 cut(s)	1221, 1253
FaqI	GGGAC	1 cut(s)	2008
FblI	GTMKAC	2 cut(s)	294, 2225
Fnu4HI	GCNGC	6 cut(s)	785, 931, 1272, 1332, 1689, 2093
FriOI	GRGCYC	2 cut(s)	180, 517
Fsp4HI	GCNGC	6 cut(s)	785, 931, 1272, 1332, 1689, 2093
FspAI	RTGCGCAY	1 cut(s)	1501
FspBI	CTAG	3 cut(s)	395, 864, 1493
FspI	TGCGCA	2 cut(s)	653, 1501
GlaI	GCGC	3 cut(s)	653, 1083, 1501
GluI	GCNGC	6 cut(s)	785, 931, 1272, 1332, 1689, 2093
GsaI	CCCAGC	1 cut(s)	846
GsuI	CTGGAG	1 cut(s)	1598
HaeIII	GGCC	9 cut(s)	5, 817, 848, 1108, 1547, 1634, 1659, 1740, 2078
HapII	CCGG	3 cut(s)	154, 1119, 2001
HgaI	GACGC	1 cut(s)	812
HhaI	GCGC	3 cut(s)	654, 1084, 1502
Hin6I	GCGC	3 cut(s)	652, 1082, 1500
HinP1I	GCGC	3 cut(s)	652, 1082, 1500
HincII	GTYRAC	1 cut(s)	232
HindII	GTYRAC	1 cut(s)	232
HindIII	AAGCTT	1 cut(s)	545
HinfI	GANTC	5 cut(s)	23, 223, 772, 867, 1146
HpaII	CCGG	3 cut(s)	154, 1119, 2001
HphI	GGTGA	7 cut(s)	196, 424, 523, 616, 1252, 1705, 2002
Hpy166II	GTNNAC	8 cut(s)	186, 232, 295, 827, 910, 1514, 1794, 2226
Hpy188I	TCNGA	8 cut(s)	412, 673, 861, 1049, 1056, 1184, 1832, 1930
Hpy188III	TCNNGA	8 cut(s)	20, 552, 804, 1095, 1119, 1642, 1673, 2202
Hpy8I	GTNNAC	8 cut(s)	186, 232, 295, 827, 910, 1514, 1794, 2226
HpyAV	CCTTC	7 cut(s)	199, 445, 601, 677, 1246, 1285, 1973
HpyCH4III	ACNGT	4 cut(s)	355, 914, 1214, 1936
HpyCH4IV	ACGT	2 cut(s)	715, 906
HpyF10VI	GCNNNNNNNGC	5 cut(s)	268, 1277, 1581, 1697, 2249
HpyF3I	CTNAG	8 cut(s)	53, 273, 468, 626, 1339, 1571, 1666, 1811
HpySE526I	ACGT	2 cut(s)	715, 906
HspAI	GCGC	3 cut(s)	652, 1082, 1500
Kpn2I	TCCGGA	1 cut(s)	1118
LmnI	GCTCC	2 cut(s)	520, 895
Lsp1109I	GCAGC	4 cut(s)	942, 1258, 1318, 1675
LweI	GCATC	4 cut(s)	464, 1197, 1267, 1487
MaeI	CTAG	3 cut(s)	395, 864, 1493
MaeII	ACGT	2 cut(s)	715, 906
MaeIII	GTNAC	3 cut(s)	304, 914, 1945
MflI	RGATCY	4 cut(s)	1403, 1457, 1477, 1644
MhlI	GDGCHC	3 cut(s)	180, 517, 1809
MlsI	TGGCCA	2 cut(s)	5, 2078
MluNI	TGGCCA	2 cut(s)	5, 2078
MlyI	GAGTC	3 cut(s)	32, 876, 1155
MmeI	TCCRAC	4 cut(s)	752, 1162, 1333, 1433
Mox20I	TGGCCA	2 cut(s)	5, 2078
Mph1103I	ATGCAT	1 cut(s)	997
MroI	TCCGGA	1 cut(s)	1118
MroXI	GAANNNNTTC	1 cut(s)	1256
MscI	TGGCCA	2 cut(s)	5, 2078
MseI	TTAA	2 cut(s)	2066, 2235
MslI	CAYNNNNRTG	4 cut(s)	36, 206, 1769, 2048
Msp20I	TGGCCA	2 cut(s)	5, 2078
MspA1I	CMGCKG	1 cut(s)	1271
MspI	CCGG	3 cut(s)	154, 1119, 2001
MspR9I	CCNGG	1 cut(s)	154
MwoI	GCNNNNNNNGC	5 cut(s)	268, 1277, 1581, 1697, 2249
NciI	CCSGG	1 cut(s)	154
NlaIV	GGNNCC	7 cut(s)	270, 480, 847, 1107, 1405, 1646, 1658
NmuCI	GTSAC	2 cut(s)	304, 914
NsbI	TGCGCA	2 cut(s)	653, 1501
NsiI	ATGCAT	1 cut(s)	997
NspI	RCATGY	4 cut(s)	402, 901, 922, 1312
NspV	TTCGAA	1 cut(s)	770
PaeI	GCATGC	1 cut(s)	402
PciI	ACATGT	1 cut(s)	918
PcsI	WCGNNNNNNNCGW	1 cut(s)	820
PdmI	GAANNNNTTC	1 cut(s)	1256
PfeI	GAWTC	2 cut(s)	223, 772
PflMI	CCANNNNNTGG	1 cut(s)	1855
PkrI	GCNGC	6 cut(s)	786, 932, 1273, 1333, 1690, 2094
PleI	GAGTC	3 cut(s)	31, 875, 1154
PpsI	GAGTC	3 cut(s)	31, 875, 1154
PscI	ACATGT	1 cut(s)	918
PshAI	GACNNNNGTC	1 cut(s)	866
PsiI	TTATAA	1 cut(s)	86
Psp124BI	GAGCTC	2 cut(s)	180, 517
PspFI	CCCAGC	1 cut(s)	842
PspN4I	GGNNCC	7 cut(s)	270, 480, 847, 1107, 1405, 1646, 1658
PspPI	GGNCC	7 cut(s)	156, 846, 1106, 1514, 1545, 1657, 1738
PstNI	CAGNNNCTG	1 cut(s)	1274
PsuI	RGATCY	4 cut(s)	1403, 1457, 1477, 1644
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	5 cut(s)	497, 617, 711, 1793, 2037
RsaNI	GTAC	5 cut(s)	496, 616, 710, 1792, 2036
RseI	CAYNNNNRTG	4 cut(s)	36, 206, 1769, 2048
SacI	GAGCTC	2 cut(s)	180, 517
SaqAI	TTAA	2 cut(s)	2066, 2235
SatI	GCNGC	6 cut(s)	785, 931, 1272, 1332, 1689, 2093
Sau96I	GGNCC	7 cut(s)	156, 846, 1106, 1514, 1545, 1657, 1738
SchI	GAGTC	3 cut(s)	32, 876, 1155
ScrFI	CCNGG	1 cut(s)	154
SduI	GDGCHC	3 cut(s)	180, 517, 1809
SfaNI	GCATC	4 cut(s)	464, 1197, 1267, 1487
SfcI	CTRYAG	1 cut(s)	1702
SfuI	TTCGAA	1 cut(s)	770
SinI	GGWCC	2 cut(s)	156, 1514
SmiMI	CAYNNNNRTG	4 cut(s)	36, 206, 1769, 2048
SmlI	CTYRAG	2 cut(s)	20, 1011
SmoI	CTYRAG	2 cut(s)	20, 1011
SphI	GCATGC	1 cut(s)	402
SsiI	CCGC	4 cut(s)	253, 785, 2082, 2092
SspMI	CTAG	3 cut(s)	395, 864, 1493
SstI	GAGCTC	2 cut(s)	180, 517
StyD4I	CCNGG	1 cut(s)	152
StyI	CCWWGG	1 cut(s)	1734
TaaI	ACNGT	4 cut(s)	355, 914, 1214, 1936
TaiI	ACGT	2 cut(s)	718, 909
TaqI	TCGA	5 cut(s)	458, 639, 770, 775, 1224
TatI	WGTACW	3 cut(s)	495, 709, 1791
TauI	GCSGC	2 cut(s)	787, 2095
TfiI	GAWTC	2 cut(s)	223, 772
Tru1I	TTAA	2 cut(s)	2066, 2235
Tru9I	TTAA	2 cut(s)	2066, 2235
TscAI	CASTG	8 cut(s)	786, 1010, 1432, 1555, 1631, 1990, 2079, 2155
TseFI	GTSAC	2 cut(s)	304, 914
TseI	GCWGC	4 cut(s)	930, 1271, 1331, 1688
Tsp45I	GTSAC	2 cut(s)	304, 914
TspGWI	ACGGA	3 cut(s)	1101, 1966, 1988
TspRI	CASTG	8 cut(s)	786, 1010, 1432, 1555, 1631, 1990, 2079, 2155
Van91I	CCANNNNNTGG	1 cut(s)	1855
VpaK11BI	GGWCC	2 cut(s)	156, 1514
XapI	RAATTY	6 cut(s)	581, 1089, 1098, 1256, 2006, 2214
XceI	RCATGY	4 cut(s)	402, 901, 922, 1312
XmiI	GTMKAC	2 cut(s)	294, 2225
XmnI	GAANNNNTTC	1 cut(s)	1256
XspI	CTAG	3 cut(s)	395, 864, 1493
Zsp2I	ATGCAT	1 cut(s)	997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.