Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

21766954 .. 21782707

Gene Structure 15754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G214200.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4584 bp

ATGGCCAACTCAAACTCTTCCCCTCTCTATGAAAGGTTGGAGCACAAAAACACCATGCACAAAGTCATGGAGTTTATAATCTTGTTCCTCCTCCTTTCACTCCTTGTTTATCGTCTCCTCTCTTTTAGCAACCATGGTTTTGCTTGGCTCGTTGCATTCCTATGTGAGCTCTGGTTTACGCTCTACTGGGTAATCACCATCAGCAGCAAATGGAGTTTTGTGGAATATAAAACATACCCCGACCGTCTCTTACAACGGGTGGCTGAGCATGAGCTTCCCCCAGTGGACATGTTTGTGACCACAGCAGACTCAGAGCTGGAACCACCTATCATTACCCTGAACACTGTGCTTTCTCTGTTGGCTGTGGATTACCCAACAGACAAACTAGCTTGCTATGTGTCGGATGATGGTTGTTCCCCTCTCACCTTCTACTCGCTTGTGGAAGCATCAAAGTTTGCCGAGCTTTGGGTTCCATTTTGCAAAAAGTACAATGTTCAAGTTAGAGCTCCTTTCAGATACTTCAATAATGATGCCATACCTTCCAGTAAGAACTCAGGGGAATTCAAGCAAGAATGGAAAACGATGAAGGATGAATATATGAAGCTTAACCGCAAAATTGAGGATGCTGTTGGCAAATCTATTCCATTTGATCTTAGCGAAGATTTTTCACTTTTCTCAAATATAGAACGCAATAATCATCCAACAATAATCAAGGTGGTGCTGGACAAGGAGGAAGGTCATTCAAATGGACTGCCCCGTTTGGTTTATATATCCAGAGAAAAGCGGCCAAAGCATCCACATCATTCCAAAGCCGGGGCCATGAATGTTTTGACCAGAGTGTCTGGGTTAATGACAAATGCCCCCTTGATGCTGAACGTAGACTGCGACATGTTTGCAAACAACCCAAGCGTTGTTCTTCATGCAATGTGCATACTGCTTGGATCCAATGAGAACCAAAATGAAATTGCATTTGCTCAATTTCCACAAATCTTCTATGACGGGCTCAAGGACGACCCCTTTGGAAATCAGATGGCAGTCATTTGGAAGTACTTGGGGCATGGGATTCAAGGAATCCAAGGAGTATTTTATGCTGGAACAGGATGTTTTCACAGAAGACAAGTCATCTACGGTCTGTCCCCTAATAATGGAAAATTAGGCAACCAAGAATTACTTAAAACCTTTGGAAATTCAAAGGAACTCACCAACTCAGCTGCTGATGCTTTGAGAGGGGAGACAAAATGTCCAAGCATGCTTTTGAAATCTATCGAGGCTGCTGCATACCAAGTTGCAAGTTGTGAATACGAATATGGCACCAATTGGGGTAGAAAGGTGGGGTGGATGTATGGATCAACAACTGAAGATATCCTCACTGGGCTTTCAATCCACAACAGAGGTTGGAAATCTATAATTTGTACACCAGACCAACCTGCCTTTCTGGGTTGCACCCCAACAGGTGGGCCTGCTTCCATGACCCAACAGAAAAGGTGGGCCACAGGCCTGCTTGAAGTGCTACTCAGTAAAAATTGTCCCATATTTGGTACTGTATTTGCTCACCTCCAATTTAGGCAGTGCTTGGCCTACCTCTGGATTTTTACGTGGGGCCTGCGGTCACTTCCTGAGACATGCTATGCTGCTCTACCAGCTTATAGTATCATCACCAACACACATATCTTCCCCAAGGGCCAAGAACTTGCTTACTATATACCAATAGCTCTATTTGTCACGACCAATATATACAATATATCACAGTATATTCAAAGCGGTCTATCAATCCGAGCATGGTGGAACAACCAAAAAATGGGAAGAATAACCGCAATGAGTGCTTGGTTATTTGGAGTTTTTGGTATCGTCCTCAAACTCTCAGGCATATCAGAGACAGTGTTTGAAGTAACAAAAAAAGACCAATCTTCTTCAACTGAGAAAGGCACTGAAGAAGAAGACACTGAAGCAGGCAGATTCACCTTTGACAAGTCCCCTATGTTTGTGCCTCCCACTACCGTTTTGCTGCTGCACTTAACCGCCTTGGCTTCTGCTCTGTTTGGGCTGCAGCCACCAGCTCATGATGGGCTCGGGTCAGGCCGATTAGAGGTTGCAGGCAGTGTGTGCTTGGTGCTCTGCCTCTGGCCATTTTTGAAAGGGTTGTTTGGTTCTGGGAAATATGGAATTCCCTTGTCCACCATTTTTAAGTCTGCTGGGCTCACACTCATTTGGCACTGGCGGCCTTGGACTGAAAATCTCATCCACACCTCTATCTGTTTCCAAATGGCTAATTCTCAATCTCTTCCTTTATGTGAAAAAACACCCCTTAAAATTAACACACTACAGAGAGCCCAGGAAATTGCAATTTTGTTCCTCTTCATCTGTCTCCTTGTTTATCGTCTCCTTTCCCTCACTGACCATGGTTTTGTCTGGCTTCTTGCCTTCCTGTGTGAGTCTTGGTTTACCTTCAATTGGGTTCTCACCCTCATCATCCAATGGACCCCTGTTGAATACAAAACTTACCCTCAAAACCTCTTGCAACAGGTGCCAGAGCTTCCTGCAGTGGACATGTTTGTGACAACAGCAGATGCAGAGCTAGAGCCGCCCATCATCACAGTGAACACAGTGCTCTCTCTTCTTGCTGTAGATTATCCATCTCACAAGCTAGCTTGCTATGTTTCTGATGATGGCTGCTCACCTCTCACCCTCTACTCTCTCACTGAAGCCTCTAAATTTGCTCAGTTTTGGGTACCCTTTTGCAAAAAGTATAATATTCAAGTTAGACCTCCATTCCGATACTTCTCTGGCAATTCCAAATTGCCGAGTGATAATCCAGTTGGGTTTCTACAAGAATGGACAAAAATGAAGGATGAGTATCAAAAGCTCTGCCAAAAAATTGAAGTTGCTGTCCAAAATTTGGCAACCCTTGATTTTTCTGGAGACTATGTGGATTTTGCTGACAGAAGGAACCATCCCACCATAATCAAGGTGCTCTCTCTCTCTGTGTTTGAAAGATTGTCTTTTCAATCACTAATTGGGATAAAGTTTGCACAGGTAATATGGGAGAACAAAGAAAGACTTTCAAATAATGGGGTGCCACATTTAGTTTATGTAGCCAGGGAGAAGCGTTCAGATCAATCACATCACCACAAAGCTGGCGCCATGAATGTTTTGACCAGGGTCTCTGGTGTGATGACAAATGCTCCATTTATGTTGAACGTCGACTGCGATATGTATGCCAACAATTCAAAGATCGTTCTGCATGCGATGTGCCTATTGCTTGGCTTCAAGCATGAAAAAGAAGGTGCATTTGTTCAGTGTCCACAAATGTTCTACGACACTTTGAAAGATGATCCATTTGGAAACCAACTGGTTCTCCCTCTAAAAACATCTTGGCCAGGGTTCGCTGGGATGCAAGGACCTCTCTATGCAGGGACCGGATGTTTTCAAAGACGTAAAGTTATCTACGGTTTTTCCTTGATAGATAGTGAAGGAAATCTGAGGGATGTGGCATTGGATAAAGAAAGGTTTGGAAATTCCACGGAGTTGATCGAATCAGCAACTCATACTTCATCAGAGAAAATTGATCATCCTCATGACCTTTCCAGTGCTGTTGAGGCAGCCAACCAAGTTGCTGGTTCTTCGTACGAGCACAGTACATTGTGGGGGACAAAGGTAGGCTGGGTTTATGGGTCAGTCACAGAAGATATCCTAACTGGGATGAAGATCCATGCAAGGGGCTGGAAGTCTATCTTATGCATGCCAGACCCACCAGGCTTTATGGGTTCTGCACCCTCATCTTCTCATGTTATGTTGACCCAAAGGAAGAGATGGGTCACAGGCCTCCTAGAAATTTTGTTCAGCAAAAATAATCCCATCTTTGCTACCCTCTATGCTAAGTTGGAGTTTAGGCAGTGCTTGGCCTACACGACCGTGCTAATTTGGGGCCTAAATTCTATTCCTGATCTATGCTATACTATACTGCCAGCCTACTGTATCATCACCAACTCACATTTCTTGCCCAAGGTCAAAGAACCGGCTCTCATATTCTTCGTTGCCGTGTTTCTAATGAAGATTCTGTACACCCTACGTTTTTACCTGGGATTTGGCCTATCAATCAAGCAATGGTGGAACCATGTGAGAATGGGGCCATCGGGGAAAATACCCTATGTAACTGCATCGCTATTTGGAGTTGTAACCCTGGCATTCAAGCTTTTGGGTATATCTGAGGTGGCATTTGAAGTCACACAGAAGGACCAATATTCCTCTTCAAGTGATGACCAAGAAGATGATGTCAATGCTGGTAGGTTCACTTTTGATGAGTCTCCAATATTTGTGCCGGCCACAACTCTCCTGTTTGTGCACTTCACAGCCCTAGCCATGGGCTTGTTTGGGATGCAACCACCGGCTCATGGTGCGGATGGGGCGGGGCTAGGTGAGATGATGTGCTGTGTTTGGGTGGTGCTATGTTTTTGGCCATTTCTCAAAGGGTTGTTTGGGAAGGGCAAATATGGAATTCCAATGCCTACTATATTCAAATCAGCTGCCTTGGCCTTGCTTTTCATGCACTTCTGTGGAAGGATCCCTCTGCCACTGCGCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

1528

Amino Acids

171.8

Weight (kDa)

7.49

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
AasI	GACNNNNNNGTC	1 cut(s)	838
Acc36I	ACCTGC	1 cut(s)	1435
Acc65I	GGTACC	1 cut(s)	2728
AccB1I	GGYRCC	5 cut(s)	1310, 2524, 2728, 3073, 3137
AccB7I	CCANNNNNTGG	3 cut(s)	1454, 1798, 2896
AccI	GTMKAC	2 cut(s)	879, 3201
AclWI	GGATC	7 cut(s)	936, 949, 1354, 3326, 3700, 4555, 4568
AcoI	YGGCCR	6 cut(s)	3, 785, 2123, 3374, 4320, 4454
AcsI	RAATTY	9 cut(s)	560, 1186, 2163, 2711, 2893, 3514, 3831, 3931, 4494
AcuI	CTGAAG	4 cut(s)	1377, 1950, 1965, 2721
AcyI	GRCGYC	1 cut(s)	3138
AfaI	GTAC	8 cut(s)	488, 1049, 1414, 1540, 2730, 3626, 3637, 4061
AflIII	ACRYGT	3 cut(s)	288, 888, 2547
AhdI	GACNNNNNGTC	1 cut(s)	1239
AjnI	CCWGG	7 cut(s)	2331, 3095, 3155, 3376, 3751, 4077, 4179
AjuI	GAANNNNNNNTTGG	4 cut(s)	1416, 1448, 3977, 4009
AleI	CACNNNNGTG	2 cut(s)	3911, 4551
Alw21I	GWGCWC	8 cut(s)	45, 171, 508, 2115, 2610, 2973, 3633, 4344
Alw44I	GTGCAC	1 cut(s)	4340
AlwI	GGATC	7 cut(s)	936, 949, 1354, 3326, 3700, 4555, 4568
AlwNI	CAGNNNCTG	1 cut(s)	1214
Ama87I	CYCGRG	1 cut(s)	2069
ApaLI	GTGCAC	1 cut(s)	4340
ApoI	RAATTY	9 cut(s)	560, 1186, 2163, 2711, 2893, 3514, 3831, 3931, 4494
ArsI	GACNNNNNNTTYG	4 cut(s)	1001, 1033, 2387, 2419
Asp718I	GGTACC	1 cut(s)	2728
AspLEI	GCGC	2 cut(s)	3140, 4578
AsuC2I	CCSGG	1 cut(s)	814
AsuNHI	GCTAGC	1 cut(s)	2644
AvaI	CYCGRG	1 cut(s)	2069
AvaII	GGWCC	4 cut(s)	2478, 3398, 3414, 4234
BaeGI	GKGCMC	1 cut(s)	4344
BalI	TGGCCA	4 cut(s)	5, 2125, 3376, 4456
BamHI	GGATCC	2 cut(s)	941, 4560
BanI	GGYRCC	5 cut(s)	1310, 2524, 2728, 3073, 3137
BanII	GRGCYC	6 cut(s)	171, 508, 1005, 2070, 2199, 2332
BarI	GAAGNNNNNNTAC	2 cut(s)	4043, 4075
BbsI	GAAGAC	2 cut(s)	1120, 1944
Bbv12I	GWGCWC	8 cut(s)	45, 171, 508, 2115, 2610, 2973, 3633, 4344
BceAI	ACGGC	1 cut(s)	4022
BcgI	CGANNNNNNTGC	6 cut(s)	875, 909, 1256, 1290, 3197, 3231
BciT130I	CCWGG	7 cut(s)	2333, 3097, 3157, 3378, 3753, 4079, 4181
BclI	TGATCA	1 cut(s)	3565
BcnI	CCSGG	1 cut(s)	814
BfaI	CTAG	6 cut(s)	386, 2576, 2645, 3827, 4355, 4412
BfmI	CTRYAG	4 cut(s)	2045, 2321, 2538, 2622
BfoI	RGCGCY	1 cut(s)	3141
BfuAI	ACCTGC	1 cut(s)	1435
BlpI	GCTNAGC	1 cut(s)	264
BmcAI	AGTACT	1 cut(s)	1049
Bme1390I	CCNGG	8 cut(s)	814, 2333, 3097, 3157, 3378, 3753, 4079, 4181
Bme18I	GGWCC	4 cut(s)	2478, 3398, 3414, 4234
BmeRI	GACNNNNNGTC	1 cut(s)	1239
BmeT110I	CYCGRG	1 cut(s)	2069
BmrFI	CCNGG	8 cut(s)	814, 2333, 3097, 3157, 3378, 3753, 4079, 4181
BmrI	ACTGGG	4 cut(s)	196, 275, 1380, 3705
BmtI	GCTAGC	1 cut(s)	2648
BmuI	ACTGGG	4 cut(s)	196, 275, 1380, 3705
BoxI	GACNNNNGTC	1 cut(s)	3158
BpiI	GAAGAC	2 cut(s)	1120, 1944
BpmI	CTGGAG	1 cut(s)	2937
Bpu1102I	GCTNAGC	1 cut(s)	264
BpuEI	CTTGAG	1 cut(s)	989
BpuMI	CCSGG	1 cut(s)	814
BsaAI	YACGTR	1 cut(s)	1596
BsaBI	GATNNNNATC	2 cut(s)	2853, 3704
BsaHI	GRCGYC	1 cut(s)	3138
BsaI	GGTCTC	1 cut(s)	3166
BsaWI	WCCGGW	1 cut(s)	3416
BsaXI	ACNNNNNCTCC	6 cut(s)	2910, 2940, 3166, 3196, 3339, 3369
Bse118I	RCCGGY	3 cut(s)	4015, 4318, 4384
Bse1I	ACTGG	9 cut(s)	191, 281, 543, 1375, 2219, 2813, 3354, 3585, 3700
Bse3DI	GCAATG	3 cut(s)	930, 1821, 4109
Bse8I	GATNNNNATC	2 cut(s)	2853, 3704
BseBI	CCWGG	7 cut(s)	2333, 3097, 3157, 3378, 3753, 4079, 4181
BseJI	GATNNNNATC	2 cut(s)	2853, 3704
BseMI	GCAATG	3 cut(s)	930, 1821, 4109
BseNI	ACTGG	9 cut(s)	191, 281, 543, 1375, 2219, 2813, 3354, 3585, 3700
BseRI	GAGGAG	2 cut(s)	80, 107
BseSI	GKGCMC	1 cut(s)	4344
BseYI	CCCAGC	3 cut(s)	2192, 3386, 3660
BsgI	GTGCAG	2 cut(s)	1994, 3753
Bsh1285I	CGRYCG	2 cut(s)	244, 3912
BshNI	GGYRCC	5 cut(s)	1310, 2524, 2728, 3073, 3137
BsiEI	CGRYCG	2 cut(s)	244, 3912
BsiHKAI	GWGCWC	8 cut(s)	45, 171, 508, 2115, 2610, 2973, 3633, 4344
BsiHKCI	CYCGRG	1 cut(s)	2069
BsiSI	CCGG	5 cut(s)	813, 3417, 4016, 4319, 4385
BsiWI	CGTACG	1 cut(s)	3624
BslFI	GGGAC	5 cut(s)	1120, 1512, 1957, 3427, 3661
BsmBI	CGTCTC	3 cut(s)	119, 251, 2384
BsmFI	GGGAC	5 cut(s)	1120, 1512, 1957, 3427, 3661
BsmI	GAATGC	2 cut(s)	155, 4184
Bso31I	GGTCTC	1 cut(s)	3166
BsoBI	CYCGRG	1 cut(s)	2069
Bsp1407I	TGTACA	2 cut(s)	1412, 4059
Bsp1720I	GCTNAGC	1 cut(s)	264
Bsp19I	CCATGG	3 cut(s)	133, 2398, 4359
BspHI	TCATGA	2 cut(s)	2059, 3574
BspMAI	CTGCAG	2 cut(s)	2049, 2542
BspMI	ACCTGC	1 cut(s)	1435
BspOI	GCTAGC	1 cut(s)	2648
BspPI	GGATC	7 cut(s)	936, 949, 1354, 3326, 3700, 4555, 4568
BspT107I	GGYRCC	5 cut(s)	1310, 2524, 2728, 3073, 3137
BspTNI	GGTCTC	1 cut(s)	3166
BsrDI	GCAATG	3 cut(s)	930, 1821, 4109
BsrFI	RCCGGY	3 cut(s)	4015, 4318, 4384
BsrGI	TGTACA	2 cut(s)	1412, 4059
BsrI	ACTGG	9 cut(s)	191, 281, 543, 1375, 2219, 2813, 3354, 3585, 3700
BssAI	RCCGGY	3 cut(s)	4015, 4318, 4384
BssNI	GRCGYC	1 cut(s)	3138
BssT1I	CCWWGG	9 cut(s)	133, 1075, 1677, 2022, 2222, 2398, 4002, 4359, 4527
Bst2UI	CCWGG	7 cut(s)	2333, 3097, 3157, 3378, 3753, 4079, 4181
Bst6I	CTCTTC	6 cut(s)	22, 2286, 2360, 2619, 3800, 4252
BstACI	GRCGYC	1 cut(s)	3138
BstAPI	GCANNNNNTGC	3 cut(s)	1820, 2103, 2524
BstAUI	TGTACA	2 cut(s)	1412, 4059
BstBAI	YACGTR	1 cut(s)	1596
BstDSI	CCRYGG	4 cut(s)	133, 2398, 3519, 4359
BstH2I	RGCGCY	1 cut(s)	3141
BstHHI	GCGC	2 cut(s)	3140, 4578
BstMCI	CGRYCG	2 cut(s)	244, 3912
BstNI	CCWGG	7 cut(s)	2333, 3097, 3157, 3378, 3753, 4079, 4181
BstNSI	RCATGY	7 cut(s)	292, 892, 1252, 1626, 2551, 3245, 3742
BstPAI	GACNNNNGTC	1 cut(s)	3158
BstSCI	CCNGG	8 cut(s)	812, 2331, 3095, 3155, 3376, 3751, 4077, 4179
BstSFI	CTRYAG	4 cut(s)	2045, 2321, 2538, 2622
BstSLI	GKGCMC	1 cut(s)	4344
BstV2I	GAAGAC	2 cut(s)	1120, 1944
BstX2I	RGATCY	3 cut(s)	941, 3705, 4560
BstXI	CCANNNNNNTGG	2 cut(s)	3134, 3614
BstYI	RGATCY	3 cut(s)	941, 3705, 4560
BtgI	CCRYGG	4 cut(s)	133, 2398, 3519, 4359
BtgZI	GCGATG	2 cut(s)	3260, 4143
BtsI	GCAGTG	5 cut(s)	1574, 2104, 2547, 3899, 4571
BveI	ACCTGC	1 cut(s)	1435
CaiI	CAGNNNCTG	1 cut(s)	1214
CciI	TCATGA	2 cut(s)	2059, 3574
CfoI	GCGC	2 cut(s)	3140, 4578
Cfr10I	RCCGGY	3 cut(s)	4015, 4318, 4384
Csp6I	GTAC	8 cut(s)	487, 1048, 1413, 1539, 2729, 3625, 3636, 4060
CviQI	GTAC	8 cut(s)	487, 1048, 1413, 1539, 2729, 3625, 3636, 4060
DinI	GGCGCC	1 cut(s)	3139
DrdI	GACNNNNNNGTC	1 cut(s)	838
DriI	GACNNNNNGTC	1 cut(s)	1239
DseDI	GACNNNNNNGTC	1 cut(s)	838
EaeI	YGGCCR	6 cut(s)	3, 785, 2123, 3374, 4320, 4454
Eam1104I	CTCTTC	6 cut(s)	22, 2286, 2360, 2619, 3800, 4252
Eam1105I	GACNNNNNGTC	1 cut(s)	1239
EarI	CTCTTC	6 cut(s)	22, 2286, 2360, 2619, 3800, 4252
Ecl136II	GAGCTC	2 cut(s)	169, 506
Eco130I	CCWWGG	9 cut(s)	133, 1075, 1677, 2022, 2222, 2398, 4002, 4359, 4527
Eco147I	AGGCCT	2 cut(s)	1497, 3822
Eco24I	GRGCYC	6 cut(s)	171, 508, 1005, 2070, 2199, 2332
Eco31I	GGTCTC	1 cut(s)	3166
Eco32I	GATATC	2 cut(s)	1363, 3688
Eco47I	GGWCC	4 cut(s)	2478, 3398, 3414, 4234
Eco53kI	GAGCTC	2 cut(s)	169, 506
Eco57I	CTGAAG	4 cut(s)	1377, 1950, 1965, 2721
Eco88I	CYCGRG	1 cut(s)	2069
EcoICRI	GAGCTC	2 cut(s)	169, 506
EcoO109I	RGGNCCY	3 cut(s)	1600, 3398, 3925
EcoRI	GAATTC	3 cut(s)	560, 2163, 4494
EcoRII	CCWGG	7 cut(s)	2331, 3095, 3155, 3376, 3751, 4077, 4179
EcoRV	GATATC	2 cut(s)	1363, 3688
EcoT14I	CCWWGG	9 cut(s)	133, 1075, 1677, 2022, 2222, 2398, 4002, 4359, 4527
EcoT22I	ATGCAT	1 cut(s)	3740
EcoT38I	GRGCYC	6 cut(s)	171, 508, 1005, 2070, 2199, 2332
EgeI	GGCGCC	1 cut(s)	3139
EheI	GGCGCC	1 cut(s)	3139
ErhI	CCWWGG	9 cut(s)	133, 1075, 1677, 2022, 2222, 2398, 4002, 4359, 4527
Esp3I	CGTCTC	3 cut(s)	119, 251, 2384
FalI	AAGNNNNNCTT	8 cut(s)	1155, 1187, 2983, 3015, 3042, 3074, 3716, 3748
FaqI	GGGAC	5 cut(s)	1120, 1512, 1957, 3427, 3661
FauI	CCCGC	1 cut(s)	4399
FbaI	TGATCA	1 cut(s)	3565
FblI	GTMKAC	2 cut(s)	879, 3201
FriOI	GRGCYC	6 cut(s)	171, 508, 1005, 2070, 2199, 2332
FspBI	CTAG	6 cut(s)	386, 2576, 2645, 3827, 4355, 4412
GlaI	GCGC	2 cut(s)	3139, 4577
GsaI	CCCAGC	3 cut(s)	2196, 3390, 3664
GsuI	CTGGAG	1 cut(s)	2937
HaeII	RGCGCY	1 cut(s)	3141
HapII	CCGG	5 cut(s)	813, 3417, 4016, 4319, 4385
HhaI	GCGC	2 cut(s)	3140, 4578
Hin1I	GRCGYC	1 cut(s)	3138
Hin6I	GCGC	2 cut(s)	3138, 4576
HinP1I	GCGC	2 cut(s)	3138, 4576
HincII	GTYRAC	2 cut(s)	3202, 3795
HindII	GTYRAC	2 cut(s)	3202, 3795
HindIII	AAGCTT	2 cut(s)	602, 4190
HinfI	GANTC	8 cut(s)	308, 1063, 1071, 1956, 2432, 3533, 4054, 4301
HpaII	CCGG	5 cut(s)	813, 3417, 4016, 4319, 4385
Hpy188III	TCNNGA	8 cut(s)	774, 1585, 1616, 1723, 2060, 2916, 3575, 3941
Hpy99I	CGWCG	1 cut(s)	3203
HpyCH4IV	ACGT	5 cut(s)	876, 1595, 3198, 3433, 4069
HpySE526I	ACGT	5 cut(s)	876, 1595, 3198, 3433, 4069
Hsp92I	GRCGYC	1 cut(s)	3138
HspAI	GCGC	2 cut(s)	3138, 4576
KasI	GGCGCC	1 cut(s)	3137
KpnI	GGTACC	1 cut(s)	2732
KroI	GCCGGC	1 cut(s)	4318
KroNI	GCCGGC	1 cut(s)	4320
Ksp22I	TGATCA	1 cut(s)	3565
LmnI	GCTCC	3 cut(s)	40, 511, 3187
MaeI	CTAG	6 cut(s)	386, 2576, 2645, 3827, 4355, 4412
MaeII	ACGT	5 cut(s)	876, 1595, 3198, 3433, 4069
MfeI	CAATTG	2 cut(s)	1315, 2449
MflI	RGATCY	3 cut(s)	941, 3705, 4560
MlsI	TGGCCA	4 cut(s)	5, 2125, 3376, 4456
MluNI	TGGCCA	4 cut(s)	5, 2125, 3376, 4456
Mly113I	GGCGCC	1 cut(s)	3138
MlyI	GAGTC	3 cut(s)	302, 2441, 4310
MmeI	TCCRAC	5 cut(s)	18, 381, 725, 1376, 3861
Mox20I	TGGCCA	4 cut(s)	5, 2125, 3376, 4456
Mph1103I	ATGCAT	1 cut(s)	3740
MroNI	GCCGGC	1 cut(s)	4318
MscI	TGGCCA	4 cut(s)	5, 2125, 3376, 4456
MseI	TTAA	7 cut(s)	606, 848, 1173, 2015, 2184, 2307, 2313
MslI	CAYNNNNRTG	8 cut(s)	160, 293, 744, 2552, 2594, 3573, 3911, 4551
Msp20I	TGGCCA	4 cut(s)	5, 2125, 3376, 4456
MspA1I	CMGCKG	3 cut(s)	1211, 4523, 4581
MspI	CCGG	5 cut(s)	813, 3417, 4016, 4319, 4385
MspR9I	CCNGG	8 cut(s)	814, 2333, 3097, 3157, 3378, 3753, 4079, 4181
MunI	CAATTG	2 cut(s)	1315, 2449
Mva1269I	GAATGC	2 cut(s)	155, 4184
MvaI	CCWGG	7 cut(s)	2333, 3097, 3157, 3378, 3753, 4079, 4181
NaeI	GCCGGC	1 cut(s)	4320
NarI	GGCGCC	1 cut(s)	3138
NciI	CCSGG	1 cut(s)	814
NcoI	CCATGG	3 cut(s)	133, 2398, 4359
NgoMIV	GCCGGC	1 cut(s)	4318
NheI	GCTAGC	1 cut(s)	2644
NmeAIII	GCCGAG	2 cut(s)	484, 2826
NmuCI	GTSAC	7 cut(s)	295, 1608, 1720, 2554, 3676, 3814, 4222
NsiI	ATGCAT	1 cut(s)	3740
NspI	RCATGY	7 cut(s)	292, 892, 1252, 1626, 2551, 3245, 3742
OliI	CACNNNNGTG	2 cut(s)	3911, 4551
PaeI	GCATGC	3 cut(s)	1252, 3245, 3742
PagI	TCATGA	2 cut(s)	2059, 3574
PceI	AGGCCT	2 cut(s)	1497, 3822
PciI	ACATGT	3 cut(s)	288, 888, 2547
PcsI	WCGNNNNNNNCGW	2 cut(s)	882, 3204
PctI	GAATGC	2 cut(s)	155, 4184
PdiI	GCCGGC	1 cut(s)	4320
PfeI	GAWTC	5 cut(s)	1063, 1071, 1956, 3533, 4054
Pfl23II	CGTACG	1 cut(s)	3624
PflMI	CCANNNNNTGG	3 cut(s)	1454, 1798, 2896
PleI	GAGTC	3 cut(s)	302, 2440, 4309
PluTI	GGCGCC	1 cut(s)	3141
PpsI	GAGTC	3 cut(s)	302, 2440, 4309
Ppu21I	YACGTR	1 cut(s)	1596
PpuMI	RGGWCCY	1 cut(s)	3398
PscI	ACATGT	3 cut(s)	288, 888, 2547
PshAI	GACNNNNGTC	1 cut(s)	3158
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	2 cut(s)	171, 508
Psp5II	RGGWCCY	1 cut(s)	3398
Psp6I	CCWGG	7 cut(s)	2331, 3095, 3155, 3376, 3751, 4077, 4179
PspFI	CCCAGC	3 cut(s)	2192, 3386, 3660
PspGI	CCWGG	7 cut(s)	2331, 3095, 3155, 3376, 3751, 4077, 4179
PspLI	CGTACG	1 cut(s)	3624
PspPPI	RGGWCCY	1 cut(s)	3398
PstI	CTGCAG	2 cut(s)	2049, 2542
PstNI	CAGNNNCTG	1 cut(s)	1214
PsuI	RGATCY	3 cut(s)	941, 3705, 4560
PvuII	CAGCTG	2 cut(s)	1211, 4523
RsaI	GTAC	8 cut(s)	488, 1049, 1414, 1540, 2730, 3626, 3637, 4061
RsaNI	GTAC	8 cut(s)	487, 1048, 1413, 1539, 2729, 3625, 3636, 4060
RseI	CAYNNNNRTG	8 cut(s)	160, 293, 744, 2552, 2594, 3573, 3911, 4551
SacI	GAGCTC	2 cut(s)	171, 508
SalI	GTCGAC	1 cut(s)	3200
SaqAI	TTAA	7 cut(s)	606, 848, 1173, 2015, 2184, 2307, 2313
ScaI	AGTACT	1 cut(s)	1049
SchI	GAGTC	3 cut(s)	302, 2441, 4310
ScrFI	CCNGG	8 cut(s)	814, 2333, 3097, 3157, 3378, 3753, 4079, 4181
SfcI	CTRYAG	4 cut(s)	2045, 2321, 2538, 2622
SfoI	GGCGCC	1 cut(s)	3139
SinI	GGWCC	4 cut(s)	2478, 3398, 3414, 4234
SmiMI	CAYNNNNRTG	8 cut(s)	160, 293, 744, 2552, 2594, 3573, 3911, 4551
SmlI	CTYRAG	1 cut(s)	1004
SmoI	CTYRAG	1 cut(s)	1004
SphI	GCATGC	3 cut(s)	1252, 3245, 3742
SseBI	AGGCCT	2 cut(s)	1497, 3822
SspDI	GGCGCC	1 cut(s)	3137
SspI	AATATT	3 cut(s)	2752, 4241, 4311
SspMI	CTAG	6 cut(s)	386, 2576, 2645, 3827, 4355, 4412
SstI	GAGCTC	2 cut(s)	171, 508
StuI	AGGCCT	2 cut(s)	1497, 3822
StyD4I	CCNGG	8 cut(s)	812, 2331, 3095, 3155, 3376, 3751, 4077, 4179
StyI	CCWWGG	9 cut(s)	133, 1075, 1677, 2022, 2222, 2398, 4002, 4359, 4527
TaiI	ACGT	5 cut(s)	879, 1598, 3201, 3436, 4072
TaqI	TCGA	3 cut(s)	1266, 3201, 3531
TatI	WGTACW	5 cut(s)	486, 1047, 1412, 3635, 4059
TauI	GCSGC	4 cut(s)	787, 2221, 2584, 4581
TfiI	GAWTC	5 cut(s)	1063, 1071, 1956, 3533, 4054
Tru1I	TTAA	7 cut(s)	606, 848, 1173, 2015, 2184, 2307, 2313
Tru9I	TTAA	7 cut(s)	606, 848, 1173, 2015, 2184, 2307, 2313
TseFI	GTSAC	7 cut(s)	295, 1608, 1720, 2554, 3676, 3814, 4222
Tsp45I	GTSAC	7 cut(s)	295, 1608, 1720, 2554, 3676, 3814, 4222
TspGWI	ACGGA	1 cut(s)	3536
Van91I	CCANNNNNTGG	3 cut(s)	1454, 1798, 2896
VneI	GTGCAC	1 cut(s)	4340
VpaK11BI	GGWCC	4 cut(s)	2478, 3398, 3414, 4234
XapI	RAATTY	9 cut(s)	560, 1186, 2163, 2711, 2893, 3514, 3831, 3931, 4494
XceI	RCATGY	7 cut(s)	292, 892, 1252, 1626, 2551, 3245, 3742
XmiI	GTMKAC	2 cut(s)	879, 3201
XspI	CTAG	6 cut(s)	386, 2576, 2645, 3827, 4355, 4412
ZrmI	AGTACT	1 cut(s)	1049
Zsp2I	ATGCAT	1 cut(s)	3740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.