Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Forward (+)

2526425 .. 2532518

Gene Structure 6094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g03400.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGACTTGCATTCTCCATCCCCTTGGCGTCATATGGAACAGAATCTCAATCTGTCACTTGATAGGGAGAGACGTCCTTTCCAGGCTGCTGAACCACCCTCACTACACTTTGCATAAACCAAGCCACATAAATTTTCTTCACATTTTTCCAATGGCTAACCAAAACTCACTCCCTCTACACGAAAGAATAGAGCTTAGATACACTCTGCATAAAGTCATTGAGTTCATAATCCTCTTCCTCCTCCTTTCACTCCTCGTTCATCGTCTTCTCTCTTTCAACGACCATGGTTTCACTTGGCTCATTGCTTTCCTGTGTGAGCTCTCATTCACCTTAAATTGGGTCATCACCATAAGCAACAAATGGAACATTGTCGAATATAAAACCTACCCTGACCGCCTCTTACAACGGGTTTCTAAGCATGAACTCCCTCCGGTGGACATGTTTGTGACAACTGCAAACTCGGAGTTGGAACCACCTATTATTACCATAAACACTGTTTTGTCTCTGTTGGCTGTGGACTACCCAACAAACAAGCTAGCTTGCTATGTATCTGATGATGGCTGTTCTCCTCTCACCTTCTACTCGCTTTCGGAAGCATCAAAGTTCGCCAAGCTTTGGGTTCCATTTTGCAAGAAATACAATGTTCAAGTTAGAGCTCCTTTTAGATACTTCTCAAATAATAATACAACATTTTCCAGTAATGACTCGAGTGAATTCAAGCAAGAATGGACATTATTGAAGGATGAATACGAGCAGCTTAGCCGCAAAATTGAGGATGCGGTGGGACAATCTATTCCATTCGATGTTAGCCAAGACTTTACAGTTTTTTCAAATGTAGAACGTAATAATCACCCAACAATTATCAAGGTTCTATGGGAGAACAAGGAAGATGTTTCAGATGGACTGCCACATTTGATTTATATATCAAGAGAAAAACGGCCAAAGCATCCCCATCATTCCAAAGCCGGGGCCATGAATGTTTTGACTAGAGTCTCTGGGTTAATGACCAATGCACCCTTCATGCTGAACGTAGACTGCGATATGTTTGTCAACAACCCAAACATTATGTTGCAAGCAATGTGTGCGTTGCTCGGATCCGAGAACGAAACCAAAAATGCGTTTGCTCAGTTTCCTCAGATCTTCTATGACGGACTCAAGGATGATCCGTTCGGGAATCAGATGGTAGTTTTGTGGAAGTTTGTGGGGCAAGGAATGGCAGGAATGCAAGGCCCTATTTATGCGGGAACAGGATGCGTTCATAGACGAAAAGTTATCTATGGTCTATCCCCTAGTGATGCCAAAACCGGAGAAAGATACCCTAATATTGCTAGTGGCATGATCGATCATAGTTTTACTGTCTTTTTGACAGGAAAAGTAGAAATGCTTAAAACTTTTGGGACTTCAGAAGAATTCACCAAATCAGCTGGTGATGCCTTGCAAGGGAATACGGAATGTGTAAACATGTCTTCGAAATCCATTGAGGCTGCACACCGAGTTGGAGGATGTGAGTACGAATATGGCACCAATTGGGGTATAAAGGTGGGATGGAGGTATGGATCAACAACAGAAGATATCCTTACTGGCCTTTCAATCCATAACAAAGGTTGGAAGTCTATTATTTGTACACCAGACCCACCGGGGTTTCTAGGATGTGCACCTACAGGTGGTCCTGATTCCATGACCCAGCAGAAGAGATGGGCAACAGGCTTGCTTGAAATCCTGCTTAGTAAAAATTGTCCCATATTTGGCACTCTATTTGCAAACCTCCAATTTAGGATGTTCTTGTGTTACTTCTGGGCCCTTACTTGGGGCCTACGTTGTATTCCTGAGCTGTGCTATGCTGCTCTGCCAGCTTATAGTATCATCACCAACACACATTTCTTACCCAAGGGCCAAGAACCAACCTACTATATACCCGTAGCTCTCTTCGTCCTTTACCATATTTACACTTTATTGGAGCACCTTGAAACCGGTCTATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAACTGTAATGAGTGCTTGGTTATTTGGATTTATTGGTGTCATACTCAAACTCTTAGGGATATCTGAGACAGTCTTTGAAGTTACTAGAAAAGATCAATCTACTTCAAGTGATGAAGGCTCTGATGACAGTGAAGCTGGCAGATTCACATTTGACACGTCTCCAATTTTTGTGCCTCCCACAACTATTTTGCTGGTGCAGTTAACCGCGCTTGCTACTGCTTTCTTGGGTCTGCGGCAGCAAGATCAAGACAAGCTAGGGTCAGGCCCCTTGGAGGTTATAAGTAGTGTGTGGTTGGTGTTATGCCTCTGGCCATTTTTGAAAGGGTTGTTTGGTACTGGGAAGTATGGAATTCCCCTATCCACCATATTCAAGTCTGTTGGTTTGACGCTACTGTTCTACACCTTGTGTAGAAATCTTGCTATGTATCAGATGATGGGTGTTCACCTCTCACTCTCTACTCTCTCATTGAAGCCTCTGCTAAGCGTTGGGTACCCTTTTGCAAATAGTACCATGTTCAAGTTAGAGCACCGTTCAGATACTTCTCTGACAATCCCATTTTATCAAGTTATAGTCCATCAGGACTCCTTCAAGAATGGACAAAAAATGAAGGATGAGTACGAAAAGCCCTGCCAAAAAATTGAAGATGCTGTCCAAAAATTGGCTCCTCTTGATTTTTCTAGTGACTCTGGATTTTTCTCACATAGACAGCAGGAACCATCCCACTATAATCAAGGTTCTTTTTCTTTTAATTCATACTACAAGAAAAAACCTGCCAATAAATTTAAATTTAGTTTCATTGGTAAAGTGATATATATATATATATATATATATATATATATGCATGATGACTTTAATGGAGTGAAAATAACAGCTCTTATTCAAATTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

970

Amino Acids

110.01

Weight (kDa)

7.77

Isoelectric Point (pI)

39.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2297
AatII	GACGTC	1 cut(s)	75
Acc36I	ACCTGC	1 cut(s)	2797
Acc65I	GGTACC	1 cut(s)	2508
AccB1I	GGYRCC	2 cut(s)	1520, 2508
AccB7I	CCANNNNNTGG	3 cut(s)	615, 2008, 2677
AccI	GTMKAC	1 cut(s)	1032
AccII	CGCG	1 cut(s)	2225
AciI	CCGC	6 cut(s)	394, 763, 779, 1241, 2223, 2251
AclWI	GGATC	4 cut(s)	1089, 1102, 1157, 1564
AcoI	YGGCCR	2 cut(s)	938, 2327
AcsI	RAATTY	7 cut(s)	130, 713, 1409, 2367, 2798, 2804, 2901
AcuI	CTGAAG	1 cut(s)	1386
AcyI	GRCGYC	2 cut(s)	27, 72
AdeI	CACNNNGTG	1 cut(s)	2424
AfaI	GTAC	6 cut(s)	1511, 1624, 2353, 2510, 2527, 2636
AflIII	ACRYGT	3 cut(s)	438, 1461, 2172
AgeI	ACCGGT	1 cut(s)	1970
AjiI	CACGTC	1 cut(s)	2175
AjnI	CCWGG	1 cut(s)	80
AjuI	GAANNNNNNNTTGG	4 cut(s)	1001, 1033, 1862, 1894
AloI	GAACNNNNNNTCC	2 cut(s)	1151, 1183
Alw21I	GWGCWC	5 cut(s)	321, 658, 1657, 1962, 2547
Alw26I	GTCTC	5 cut(s)	63, 507, 997, 2078, 2181
Alw44I	GTGCAC	1 cut(s)	1653
AlwI	GGATC	4 cut(s)	1089, 1102, 1157, 1564
Ama87I	CYCGRG	1 cut(s)	706
AoxI	GGCC	9 cut(s)	938, 969, 1228, 1582, 1797, 1810, 1891, 2281, 2327
ApaI	GGGCCC	1 cut(s)	1801
ApaLI	GTGCAC	1 cut(s)	1653
ApeKI	GCWGC	5 cut(s)	85, 754, 1484, 1841, 2254
ApoI	RAATTY	7 cut(s)	130, 713, 1409, 2367, 2798, 2804, 2901
AsiGI	ACCGGT	1 cut(s)	1970
Asp718I	GGTACC	1 cut(s)	2508
AspLEI	GCGC	1 cut(s)	2227
AspS9I	GGNCC	8 cut(s)	969, 1229, 1667, 1797, 1798, 1810, 1891, 2282
AsuC2I	CCSGG	2 cut(s)	967, 1638
AsuHPI	GGTGA	8 cut(s)	319, 337, 565, 842, 1405, 1439, 1858, 2453
AsuII	TTCGAA	1 cut(s)	1469
AsuNHI	GCTAGC	1 cut(s)	535
AvaI	CYCGRG	1 cut(s)	706
AvaII	GGWCC	1 cut(s)	1667
BaeGI	GKGCMC	2 cut(s)	1657, 1801
BalI	TGGCCA	1 cut(s)	2329
BamHI	GGATCC	1 cut(s)	1094
BanI	GGYRCC	2 cut(s)	1520, 2508
BanII	GRGCYC	3 cut(s)	321, 658, 1801
BarI	GAAGNNNNNNTAC	4 cut(s)	731, 763, 2618, 2650
BbsI	GAAGAC	2 cut(s)	257, 1458
Bbv12I	GWGCWC	5 cut(s)	321, 658, 1657, 1962, 2547
BbvI	GCAGC	5 cut(s)	72, 766, 1471, 1828, 2266
BceAI	ACGGC	1 cut(s)	953
BciT130I	CCWGG	1 cut(s)	82
BcnI	CCSGG	2 cut(s)	967, 1638
BcoDI	GTCTC	5 cut(s)	63, 507, 997, 2078, 2181
BfaI	CTAG	8 cut(s)	536, 987, 1290, 1329, 1646, 2103, 2273, 2697
BfmI	CTRYAG	1 cut(s)	1659
BfuAI	ACCTGC	1 cut(s)	2797
BglII	AGATCT	1 cut(s)	1137
BisI	GCNGC	7 cut(s)	86, 755, 763, 1485, 1842, 2252, 2255
BlpI	GCTNAGC	2 cut(s)	758, 2498
BlsI	GCNGC	7 cut(s)	87, 756, 764, 1486, 1843, 2253, 2256
Bme1390I	CCNGG	3 cut(s)	82, 967, 1638
Bme18I	GGWCC	1 cut(s)	1667
BmeT110I	CYCGRG	1 cut(s)	706
BmgBI	CACGTC	1 cut(s)	2175
BmgT120I	GGNCC	8 cut(s)	969, 1229, 1667, 1797, 1798, 1810, 1891, 2282
BmrFI	CCNGG	3 cut(s)	82, 967, 1638
BmrI	ACTGGG	1 cut(s)	2364
BmsI	GCATC	7 cut(s)	605, 766, 955, 1241, 1285, 1420, 2653
BmtI	GCTAGC	1 cut(s)	539
BmuI	ACTGGG	1 cut(s)	2364
BoxI	GACNNNNGTC	1 cut(s)	989
BpiI	GAAGAC	2 cut(s)	257, 1458
Bpu10I	CCTNAGC	1 cut(s)	1827
Bpu1102I	GCTNAGC	2 cut(s)	758, 2498
Bpu14I	TTCGAA	1 cut(s)	1469
BpuEI	CTTGAG	1 cut(s)	1139
BpuMI	CCSGG	2 cut(s)	967, 1638
Bsa29I	ATCGAT	1 cut(s)	1341
BsaHI	GRCGYC	2 cut(s)	27, 72
BsaJI	CCNNGG	6 cut(s)	22, 283, 966, 1637, 1887, 2286
BsaWI	WCCGGW	3 cut(s)	430, 1304, 1970
Bse118I	RCCGGY	1 cut(s)	1970
Bse1I	ACTGG	3 cut(s)	696, 1585, 2359
Bse3DI	GCAATG	2 cut(s)	300, 1083
BseBI	CCWGG	1 cut(s)	82
BseCI	ATCGAT	1 cut(s)	1341
BseDI	CCNNGG	6 cut(s)	22, 283, 966, 1637, 1887, 2286
BseMI	GCAATG	2 cut(s)	300, 1083
BseMII	CTCAG	4 cut(s)	1139, 1148, 1818, 2073
BseNI	ACTGG	3 cut(s)	696, 1585, 2359
BseRI	GAGGAG	4 cut(s)	230, 242, 558, 2673
BseSI	GKGCMC	2 cut(s)	1657, 1801
BseXI	GCAGC	5 cut(s)	72, 766, 1471, 1828, 2266
BseYI	CCCAGC	1 cut(s)	1683
BsgI	GTGCAG	2 cut(s)	1470, 2234
Bsh1236I	CGCG	1 cut(s)	2225
BshFI	GGCC	9 cut(s)	940, 971, 1230, 1584, 1799, 1812, 1893, 2283, 2329
BshNI	GGYRCC	2 cut(s)	1520, 2508
BshTI	ACCGGT	1 cut(s)	1970
BshVI	ATCGAT	1 cut(s)	1341
BsiHKAI	GWGCWC	5 cut(s)	321, 658, 1657, 1962, 2547
BsiHKCI	CYCGRG	1 cut(s)	706
BsiSI	CCGG	5 cut(s)	431, 966, 1305, 1637, 1971
BslFI	GGGAC	3 cut(s)	798, 1411, 1722
BsmAI	GTCTC	5 cut(s)	63, 507, 997, 2078, 2181
BsmBI	CGTCTC	2 cut(s)	63, 2181
BsmFI	GGGAC	3 cut(s)	798, 1411, 1722
BsmI	GAATGC	2 cut(s)	9, 1227
BsnI	GGCC	9 cut(s)	940, 971, 1230, 1584, 1799, 1812, 1893, 2283, 2329
BsoBI	CYCGRG	1 cut(s)	706
Bsp119I	TTCGAA	1 cut(s)	1469
Bsp120I	GGGCCC	1 cut(s)	1797
Bsp1286I	GDGCHC	6 cut(s)	321, 658, 1657, 1801, 1962, 2547
Bsp1407I	TGTACA	1 cut(s)	1622
Bsp143I	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
Bsp1720I	GCTNAGC	2 cut(s)	758, 2498
Bsp19I	CCATGG	1 cut(s)	283
BspACI	CCGC	6 cut(s)	394, 763, 779, 1241, 2223, 2251
BspANI	GGCC	9 cut(s)	940, 971, 1230, 1584, 1799, 1812, 1893, 2283, 2329
BspCNI	CTCAG	4 cut(s)	1138, 1147, 1819, 2074
BspDI	ATCGAT	1 cut(s)	1341
BspFNI	CGCG	1 cut(s)	2225
BspMI	ACCTGC	1 cut(s)	2797
BspOI	GCTAGC	1 cut(s)	539
BspPI	GGATC	4 cut(s)	1089, 1102, 1157, 1564
BspT104I	TTCGAA	1 cut(s)	1469
BspT107I	GGYRCC	2 cut(s)	1520, 2508
BsrDI	GCAATG	2 cut(s)	300, 1083
BsrFI	RCCGGY	1 cut(s)	1970
BsrGI	TGTACA	1 cut(s)	1622
BsrI	ACTGG	3 cut(s)	696, 1585, 2359
BssAI	RCCGGY	1 cut(s)	1970
BssECI	CCNNGG	6 cut(s)	22, 283, 966, 1637, 1887, 2286
BssMI	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
BssNI	GRCGYC	2 cut(s)	27, 72
BssT1I	CCWWGG	4 cut(s)	22, 283, 1887, 2286
Bst2UI	CCWGG	1 cut(s)	82
Bst4CI	ACNGT	8 cut(s)	496, 823, 1357, 2023, 2089, 2147, 2412, 2549
Bst6I	CTCTTC	3 cut(s)	239, 1685, 1931
BstACI	GRCGYC	2 cut(s)	27, 72
BstAPI	GCANNNNNTGC	1 cut(s)	1082
BstAUI	TGTACA	1 cut(s)	1622
BstBI	TTCGAA	1 cut(s)	1469
BstC8I	GCNNGC	7 cut(s)	537, 541, 1074, 1709, 1851, 2155, 2229
BstDSI	CCRYGG	1 cut(s)	283
BstFNI	CGCG	1 cut(s)	2225
BstHHI	GCGC	1 cut(s)	2227
BstKTI	GATC	8 cut(s)	1097, 1140, 1165, 1341, 1345, 1559, 2113, 2263
BstMAI	GTCTC	5 cut(s)	63, 507, 997, 2078, 2181
BstMBI	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
BstMWI	GCNNNNNNNGC	3 cut(s)	1082, 1430, 1850
BstNI	CCWGG	1 cut(s)	82
BstNSI	RCATGY	2 cut(s)	442, 1465
BstPAI	GACNNNNGTC	1 cut(s)	989
BstSCI	CCNGG	3 cut(s)	80, 965, 1636
BstSFI	CTRYAG	1 cut(s)	1659
BstSLI	GKGCMC	2 cut(s)	1657, 1801
BstUI	CGCG	1 cut(s)	2225
BstV1I	GCAGC	5 cut(s)	72, 766, 1471, 1828, 2266
BstV2I	GAAGAC	2 cut(s)	257, 1458
BstX2I	RGATCY	2 cut(s)	1094, 1137
BstXI	CCANNNNNNTGG	1 cut(s)	23
BstYI	RGATCY	2 cut(s)	1094, 1137
Bsu15I	ATCGAT	1 cut(s)	1341
BsuRI	GGCC	9 cut(s)	940, 971, 1230, 1584, 1799, 1812, 1893, 2283, 2329
BsuTUI	ATCGAT	1 cut(s)	1341
BtgI	CCRYGG	1 cut(s)	283
BtrI	CACGTC	1 cut(s)	2175
BtsIMutI	CAGTG	2 cut(s)	492, 2152
BveI	ACCTGC	1 cut(s)	2797
Cac8I	GCNNGC	7 cut(s)	537, 541, 1074, 1709, 1851, 2155, 2229
CfoI	GCGC	1 cut(s)	2227
Cfr10I	RCCGGY	1 cut(s)	1970
Cfr13I	GGNCC	8 cut(s)	969, 1229, 1667, 1797, 1798, 1810, 1891, 2282
ClaI	ATCGAT	1 cut(s)	1341
CseI	GACGC	2 cut(s)	16, 2413
Csp6I	GTAC	6 cut(s)	1510, 1623, 2352, 2509, 2526, 2635
CspAI	ACCGGT	1 cut(s)	1970
CviQI	GTAC	6 cut(s)	1510, 1623, 2352, 2509, 2526, 2635
DpnI	GATC	8 cut(s)	1096, 1139, 1164, 1340, 1344, 1558, 2112, 2262
DpnII	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
DraI	TTTAAA	1 cut(s)	2803
DraIII	CACNNNGTG	1 cut(s)	2424
EaeI	YGGCCR	2 cut(s)	938, 2327
Eam1104I	CTCTTC	3 cut(s)	239, 1685, 1931
EarI	CTCTTC	3 cut(s)	239, 1685, 1931
Ecl136II	GAGCTC	2 cut(s)	319, 656
Eco130I	CCWWGG	4 cut(s)	22, 283, 1887, 2286
Eco24I	GRGCYC	3 cut(s)	321, 658, 1801
Eco32I	GATATC	2 cut(s)	1573, 2079
Eco47I	GGWCC	1 cut(s)	1667
Eco53kI	GAGCTC	2 cut(s)	319, 656
Eco57I	CTGAAG	1 cut(s)	1386
Eco88I	CYCGRG	1 cut(s)	706
EcoICRI	GAGCTC	2 cut(s)	319, 656
EcoO109I	RGGNCCY	4 cut(s)	1229, 1798, 1810, 2282
EcoRI	GAATTC	3 cut(s)	713, 1409, 2367
EcoRII	CCWGG	1 cut(s)	80
EcoRV	GATATC	2 cut(s)	1573, 2079
EcoT14I	CCWWGG	4 cut(s)	22, 283, 1887, 2286
EcoT22I	ATGCAT	1 cut(s)	2862
EcoT38I	GRGCYC	3 cut(s)	321, 658, 1801
ErhI	CCWWGG	4 cut(s)	22, 283, 1887, 2286
Esp3I	CGTCTC	2 cut(s)	63, 2181
FalI	AAGNNNNNCTT	2 cut(s)	1560, 1592
FaqI	GGGAC	3 cut(s)	798, 1411, 1722
FauI	CCCGC	1 cut(s)	1234
FauNDI	CATATG	1 cut(s)	32
FblI	GTMKAC	1 cut(s)	1032
Fnu4HI	GCNGC	7 cut(s)	86, 755, 763, 1485, 1842, 2252, 2255
FriOI	GRGCYC	3 cut(s)	321, 658, 1801
Fsp4HI	GCNGC	7 cut(s)	86, 755, 763, 1485, 1842, 2252, 2255
FspBI	CTAG	8 cut(s)	536, 987, 1290, 1329, 1646, 2103, 2273, 2697
GlaI	GCGC	1 cut(s)	2226
GluI	GCNGC	7 cut(s)	86, 755, 763, 1485, 1842, 2252, 2255
GsaI	CCCAGC	1 cut(s)	1687
HaeIII	GGCC	9 cut(s)	940, 971, 1230, 1584, 1799, 1812, 1893, 2283, 2329
HapII	CCGG	5 cut(s)	431, 966, 1305, 1637, 1971
HgaI	GACGC	2 cut(s)	16, 2413
HhaI	GCGC	1 cut(s)	2227
Hin1I	GRCGYC	2 cut(s)	27, 72
Hin6I	GCGC	1 cut(s)	2225
HinP1I	GCGC	1 cut(s)	2225
HincII	GTYRAC	2 cut(s)	1051, 2220
HindII	GTYRAC	2 cut(s)	1051, 2220
HindIII	AAGCTT	1 cut(s)	611
HinfI	GANTC	9 cut(s)	42, 704, 990, 1152, 1174, 1673, 2160, 2600, 2702
HpaI	GTTAAC	1 cut(s)	2220
HpaII	CCGG	5 cut(s)	431, 966, 1305, 1637, 1971
HphI	GGTGA	8 cut(s)	319, 337, 565, 842, 1405, 1439, 1858, 2453
Hpy166II	GTNNAC	9 cut(s)	436, 517, 1033, 1051, 1459, 1625, 1655, 2220, 2461
Hpy188III	TCNNGA	9 cut(s)	927, 1171, 1670, 1826, 2264, 2597, 2608, 2687, 2706
Hpy8I	GTNNAC	9 cut(s)	436, 517, 1033, 1051, 1459, 1625, 1655, 2220, 2461
HpyAV	CCTTC	6 cut(s)	586, 733, 1027, 2126, 2614, 2620
HpyCH4III	ACNGT	8 cut(s)	496, 823, 1357, 2023, 2089, 2147, 2412, 2549
HpyCH4IV	ACGT	5 cut(s)	72, 841, 1029, 1816, 2174
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1082, 1430, 1850
HpySE526I	ACGT	5 cut(s)	72, 841, 1029, 1816, 2174
Hsp92I	GRCGYC	2 cut(s)	27, 72
HspAI	GCGC	1 cut(s)	2225
KpnI	GGTACC	1 cut(s)	2512
KspAI	GTTAAC	1 cut(s)	2220
Kzo9I	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
LmnI	GCTCC	3 cut(s)	661, 1957, 2686
Lsp1109I	GCAGC	5 cut(s)	72, 766, 1471, 1828, 2266
LweI	GCATC	7 cut(s)	605, 766, 955, 1241, 1285, 1420, 2653
MaeI	CTAG	8 cut(s)	536, 987, 1290, 1329, 1646, 2103, 2273, 2697
MaeII	ACGT	5 cut(s)	72, 841, 1029, 1816, 2174
MaeIII	GTNAC	5 cut(s)	53, 445, 1787, 2098, 2699
MalI	GATC	8 cut(s)	1096, 1139, 1164, 1340, 1344, 1558, 2112, 2262
MboI	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
MfeI	CAATTG	1 cut(s)	1525
MflI	RGATCY	2 cut(s)	1094, 1137
MhlI	GDGCHC	6 cut(s)	321, 658, 1657, 1801, 1962, 2547
MlsI	TGGCCA	1 cut(s)	2329
MluNI	TGGCCA	1 cut(s)	2329
MlyI	GAGTC	5 cut(s)	698, 999, 1146, 2594, 2696
MmeI	TCCRAC	3 cut(s)	447, 1477, 1586
Mox20I	TGGCCA	1 cut(s)	2329
Mph1103I	ATGCAT	1 cut(s)	2862
MscI	TGGCCA	1 cut(s)	2329
MseI	TTAA	7 cut(s)	332, 1001, 1386, 2219, 2766, 2802, 2871
MslI	CAYNNNNRTG	1 cut(s)	443
Msp20I	TGGCCA	1 cut(s)	2329
MspA1I	CMGCKG	1 cut(s)	1424
MspI	CCGG	5 cut(s)	431, 966, 1305, 1637, 1971
MspR9I	CCNGG	3 cut(s)	82, 967, 1638
MunI	CAATTG	1 cut(s)	1525
Mva1269I	GAATGC	2 cut(s)	9, 1227
MvaI	CCWGG	1 cut(s)	82
MvnI	CGCG	1 cut(s)	2225
MwoI	GCNNNNNNNGC	3 cut(s)	1082, 1430, 1850
NciI	CCSGG	2 cut(s)	967, 1638
NcoI	CCATGG	1 cut(s)	283
NdeI	CATATG	1 cut(s)	32
NdeII	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
NheI	GCTAGC	1 cut(s)	535
NmuCI	GTSAC	3 cut(s)	53, 445, 2699
NsiI	ATGCAT	1 cut(s)	2862
NspI	RCATGY	2 cut(s)	442, 1465
NspV	TTCGAA	1 cut(s)	1469
PaeR7I	CTCGAG	1 cut(s)	706
PciI	ACATGT	2 cut(s)	438, 1461
PcsI	WCGNNNNNNNCGW	1 cut(s)	1035
PctI	GAATGC	2 cut(s)	9, 1227
PfeI	GAWTC	4 cut(s)	42, 1174, 1673, 2160
PflMI	CCANNNNNTGG	3 cut(s)	615, 2008, 2677
PinAI	ACCGGT	1 cut(s)	1970
PkrI	GCNGC	7 cut(s)	87, 756, 764, 1486, 1843, 2253, 2256
PleI	GAGTC	5 cut(s)	698, 998, 1146, 2594, 2696
PpsI	GAGTC	5 cut(s)	698, 998, 1146, 2594, 2696
PscI	ACATGT	2 cut(s)	438, 1461
PshAI	GACNNNNGTC	1 cut(s)	989
PsiI	TTATAA	1 cut(s)	2297
Psp124BI	GAGCTC	2 cut(s)	321, 658
Psp6I	CCWGG	1 cut(s)	80
PspFI	CCCAGC	1 cut(s)	1683
PspGI	CCWGG	1 cut(s)	80
PspOMI	GGGCCC	1 cut(s)	1797
PspPI	GGNCC	8 cut(s)	969, 1229, 1667, 1797, 1798, 1810, 1891, 2282
PspXI	VCTCGAGB	1 cut(s)	706
PsuI	RGATCY	2 cut(s)	1094, 1137
PvuII	CAGCTG	1 cut(s)	1424
RsaI	GTAC	6 cut(s)	1511, 1624, 2353, 2510, 2527, 2636
RsaNI	GTAC	6 cut(s)	1510, 1623, 2352, 2509, 2526, 2635
RseI	CAYNNNNRTG	1 cut(s)	443
SacI	GAGCTC	2 cut(s)	321, 658
SaqAI	TTAA	7 cut(s)	332, 1001, 1386, 2219, 2766, 2802, 2871
SatI	GCNGC	7 cut(s)	86, 755, 763, 1485, 1842, 2252, 2255
Sau3AI	GATC	8 cut(s)	1094, 1137, 1162, 1338, 1342, 1556, 2110, 2260
Sau96I	GGNCC	8 cut(s)	969, 1229, 1667, 1797, 1798, 1810, 1891, 2282
SchI	GAGTC	5 cut(s)	698, 999, 1146, 2594, 2696
ScrFI	CCNGG	3 cut(s)	82, 967, 1638
SduI	GDGCHC	6 cut(s)	321, 658, 1657, 1801, 1962, 2547
SfaNI	GCATC	7 cut(s)	605, 766, 955, 1241, 1285, 1420, 2653
SfcI	CTRYAG	1 cut(s)	1659
Sfr274I	CTCGAG	1 cut(s)	706
SfuI	TTCGAA	1 cut(s)	1469
SinI	GGWCC	1 cut(s)	1667
SlaI	CTCGAG	1 cut(s)	706
SmiI	ATTTAAAT	1 cut(s)	2803
SmiMI	CAYNNNNRTG	1 cut(s)	443
SmlI	CTYRAG	2 cut(s)	706, 1154
SmoI	CTYRAG	2 cut(s)	706, 1154
SsiI	CCGC	6 cut(s)	394, 763, 779, 1241, 2223, 2251
SspI	AATATT	1 cut(s)	1324
SspMI	CTAG	8 cut(s)	536, 987, 1290, 1329, 1646, 2103, 2273, 2697
SstI	GAGCTC	2 cut(s)	321, 658
StyD4I	CCNGG	3 cut(s)	80, 965, 1636
StyI	CCWWGG	4 cut(s)	22, 283, 1887, 2286
SwaI	ATTTAAAT	1 cut(s)	2803
TaaI	ACNGT	8 cut(s)	496, 823, 1357, 2023, 2089, 2147, 2412, 2549
TaiI	ACGT	5 cut(s)	75, 844, 1032, 1819, 2177
TaqI	TCGA	5 cut(s)	372, 707, 801, 1341, 1469
TatI	WGTACW	1 cut(s)	1622
TauI	GCSGC	2 cut(s)	765, 2254
TfiI	GAWTC	4 cut(s)	42, 1174, 1673, 2160
Tru1I	TTAA	7 cut(s)	332, 1001, 1386, 2219, 2766, 2802, 2871
Tru9I	TTAA	7 cut(s)	332, 1001, 1386, 2219, 2766, 2802, 2871
TscAI	CASTG	2 cut(s)	499, 2152
TseFI	GTSAC	3 cut(s)	53, 445, 2699
TseI	GCWGC	5 cut(s)	85, 754, 1484, 1841, 2254
Tsp45I	GTSAC	3 cut(s)	53, 445, 2699
TspGWI	ACGGA	3 cut(s)	1155, 1164, 1463
TspRI	CASTG	2 cut(s)	499, 2152
Van91I	CCANNNNNTGG	3 cut(s)	615, 2008, 2677
VneI	GTGCAC	1 cut(s)	1653
VpaK11BI	GGWCC	1 cut(s)	1667
XapI	RAATTY	7 cut(s)	130, 713, 1409, 2367, 2798, 2804, 2901
XceI	RCATGY	2 cut(s)	442, 1465
XhoI	CTCGAG	1 cut(s)	706
XmiI	GTMKAC	1 cut(s)	1032
XspI	CTAG	8 cut(s)	536, 987, 1290, 1329, 1646, 2103, 2273, 2697
ZraI	GACGTC	1 cut(s)	73
Zsp2I	ATGCAT	1 cut(s)	2862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.