Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003664.1

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Forward (+)

36150 .. 42297

Gene Structure 6148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003664.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

atggccaactcaaactctcttcatctctatgaaaaggttgagcttagaaacacactacatagagtcatagagtttataatcctcttcctcctcctttcactccttgtttatcgtctcctctcattcaacaaccataaattatcctggtccatcgcatttctctgcgagctctggtttaccttcagttgggtcatcaccatgagcaacaaatggaatcttgttgaccataaaccataccccgaccgcctcttgcaacgggtgcctaaggatgagcttccggcagtagacttgtttgtgaccacagcagacccagagcttgagccacctatcattaccgtaaacaccgttctgtctctgttggcagttgattacccaacagacaaactagcatgctatgtttctgatgatgggtgttcccctatcaccttctactcacttgtggaagcatcgaagtttgctaagatttgggttcccttttgcaaaaagtataatgttcaagttagagctccttttagatacttcaccaataattccaagctttctggaaataataataataatagctcaatggaattcaagcatgaatggaagatggtgaaggatgagtatgagcaacttagtagcaaaatcgaggatgtggtgcgcaaatctgtcaatccatctgatattattgaaggcgactttttagttttctcaaatgtacaacgtaataatcatccaacaataatcaaggttgtatgggagaacaaagaagcacattcgaatcgatcagtgccgcatttagtatatatatccagagaaaaacggccaaagcgtccacatcatgccaaagctggggccatgaatgttctgaccagagtctctgggttgatgactaatgctccatacatgctaaacgtggactgtgacatgttcgccagcagcccgaacattattcttcatgcaatgtgtatgctacttggatcaaagaatgaaaatgaaaatgcatttgttcagtgtcctcaagtcttctatggtggtctaaaggatgatcctttcggaaatcatatggtagttttgtggaagtatgtagcgcacggaatttcaggaattcaggggcctttttattccggaacaggatgtgttcatagacgaagagtcatctatggtctatcccccaattatgtgaaagttggagaaacaaatgcaaaaagcatgatgcagggtaaatcagtcgatgaagaactacttgatatgtttgggaaggaattcaccaaatcagctgctgatgctttgaacgggaaggcagggtgttctaacatgcttacgaaaactattgaggctgcttgcttagttgctggtgttggatatgagtatggcacacaatggggcaaaaaggtgggatggatgtatggatccacaactgaagatatcctcactgggctttcaatccataacaaaggttggagatccattctttatgcaccagatccaccagcctttctaggatgcgcacctactggtggacctgcttcaatgacccaacaaaaaaggtgggccactggcctacttgaaatcctcctcagcaaaaactgccccatatttggcactctctttgcaaacctccagttcaggcagtgcttggcctacttctggatcctttcatggggcctacgctcagttcccgagctgtgctatgctgctctgccagcctatagtatcatcaccaactcacacttcttgcccaagggccaagaacgagcttactatatacccatatctgtgtttctgttctacaatttgtacactctattagagtaccttagaaccagtctatcaatccgagcatggtggaacaaccaaagaatgggaagaataaccacaatgagtgcatggctttttggatttcttggtgtcatactcaaactcttgggcatatccgagacagtctttgaagtaacacggaaagaccaatctacttcaagcgatgaaggcactgaagatactgaagccggaaaattcacctttgaccagtccccagttttcgtacctcccacagcaatgttgtttatgcaattaacagcactggccaccgctttgttgcggcttcaaccacctgcccgtgatggggtgggatcaggctctttggagaccatgtgcagtgttttgttagtgcctaagaaaagaaaagaaaaaaccctacttgcaaccctagtcgcaagacctgcagctgcagcagcttgccgcaggccctgcagcccctgctgccccctggaacctcctcaccagcccgccttgcacacctacgcacccaagctgctgcacaccagcccgttgcaacctacgcaacaacccacgttgctacctgctccctgctgcacctgccatcctaccgcacccctgcaccagcccgcatgcagccctaccctgccacctgccttcacaacccagcgcccccctaaatccctgctacctactgctgcctgctactgtcgagcctgctgcctgctattgccgaatccgctgcagtttactacaacactcctgctccaacacgtgcatgttctcaagccccaaaacatcaaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

855

Amino Acids

95.78

Weight (kDa)

8.88

Isoelectric Point (pI)

49.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
AarI	CACCTGC	3 cut(s)	2104, 2369, 2422
Acc16I	TGCGCA	2 cut(s)	644, 1492
Acc36I	ACCTGC	6 cut(s)	1516, 2104, 2212, 2353, 2369, 2422
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	1846
AccI	GTMKAC	1 cut(s)	285
AccIII	TCCGGA	1 cut(s)	1109
AciI	CCGC	9 cut(s)	244, 776, 2073, 2083, 2224, 2271, 2373, 2391, 2501
AclWI	GGATC	9 cut(s)	970, 1025, 1389, 1402, 1443, 1463, 1630, 1643, 2122
AcoI	YGGCCR	3 cut(s)	3, 806, 2067
AcsI	RAATTY	5 cut(s)	572, 1080, 1089, 1247, 1997
AcuI	CTGAAG	4 cut(s)	166, 1425, 1998, 2007
AcvI	CACGTG	1 cut(s)	2536
AfaI	GTAC	4 cut(s)	702, 1784, 1799, 2028
AfiI	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
AflIII	ACRYGT	2 cut(s)	909, 2533
AhdI	GACNNNNNGTC	1 cut(s)	1136
AjnI	CCWGG	2 cut(s)	143, 2250
AjuI	GAANNNNNNNTTGG	2 cut(s)	1700, 1732
Alw21I	GWGCWC	2 cut(s)	171, 508
Alw26I	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
AlwI	GGATC	9 cut(s)	970, 1025, 1389, 1402, 1443, 1463, 1630, 1643, 2122
AlwNI	CAGNNNCTG	3 cut(s)	1265, 2232, 2241
Ama87I	CYCGRG	1 cut(s)	1664
Aor13HI	TCCGGA	1 cut(s)	1109
ApoI	RAATTY	5 cut(s)	572, 1080, 1089, 1247, 1997
Asp700I	GAANNNNTTC	1 cut(s)	1247
AspLEI	GCGC	4 cut(s)	645, 1075, 1493, 2433
AspS9I	GGNCC	8 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729, 2229
AsuHPI	GGTGA	8 cut(s)	187, 415, 514, 607, 1243, 1696, 1993, 2255
AsuII	TTCGAA	1 cut(s)	761
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	2 cut(s)	147, 1505
AxyI	CCTNAGG	1 cut(s)	264
BalI	TGGCCA	2 cut(s)	5, 2069
BamHI	GGATCC	2 cut(s)	1394, 1635
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	2 cut(s)	171, 508
BbrPI	CACGTG	1 cut(s)	2536
BbsI	GAAGAC	1 cut(s)	1000
Bbv12I	GWGCWC	2 cut(s)	171, 508
BbvCI	CCTCAGC	1 cut(s)	1562
BccI	CCATC	7 cut(s)	158, 401, 586, 667, 1377, 2099, 2373
BceAI	ACGGC	1 cut(s)	821
BcgI	CGANNNNNNTGC	4 cut(s)	2463, 2485, 2497, 2519
BciT130I	CCWGG	2 cut(s)	145, 2252
BcoDI	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
BfaI	CTAG	3 cut(s)	386, 1484, 2192
BfmI	CTRYAG	5 cut(s)	1693, 2205, 2211, 2233, 2504
BfoI	RGCGCY	1 cut(s)	2434
BfuAI	ACCTGC	6 cut(s)	1516, 2104, 2212, 2353, 2369, 2422
Bme1390I	CCNGG	2 cut(s)	145, 2252
Bme18I	GGWCC	2 cut(s)	147, 1505
BmeRI	GACNNNNNGTC	1 cut(s)	1136
BmeT110I	CYCGRG	1 cut(s)	1664
BmgT120I	GGNCC	8 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729, 2229
BmiI	GGNNCC	8 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649, 2256
BmrFI	CCNGG	2 cut(s)	145, 2252
BmrI	ACTGGG	2 cut(s)	1428, 2012
BmsI	GCATC	4 cut(s)	455, 1188, 1258, 1478
BmuI	ACTGGG	2 cut(s)	1428, 2012
BoxI	GACNNNNGTC	1 cut(s)	857
BpiI	GAAGAC	1 cut(s)	1000
BpmI	CTGGAG	1 cut(s)	1589
Bpu10I	CCTNAGC	1 cut(s)	1562
Bpu14I	TTCGAA	1 cut(s)	761
BpuEI	CTTGAG	3 cut(s)	338, 987, 2531
Bsa29I	ATCGAT	1 cut(s)	766
BsaAI	YACGTR	1 cut(s)	2536
BsaI	GGTCTC	1 cut(s)	2123
BsaJI	CCNNGG	2 cut(s)	1725, 2250
BsaWI	WCCGGW	1 cut(s)	1109
BsaXI	ACNNNNNCTCC	6 cut(s)	865, 895, 2120, 2150, 2511, 2541
Bsc4I	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
Bse1I	ACTGG	8 cut(s)	1423, 1504, 1546, 1606, 1809, 2011, 2018, 2070
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	2 cut(s)	951, 2046
BseAI	TCCGGA	1 cut(s)	1109
BseBI	CCWGG	2 cut(s)	145, 2252
BseCI	ATCGAT	1 cut(s)	766
BseDI	CCNNGG	2 cut(s)	1725, 2250
BseLI	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
BseMI	GCAATG	2 cut(s)	951, 2046
BseMII	CTCAG	2 cut(s)	1576, 1671
BseNI	ACTGG	8 cut(s)	1423, 1504, 1546, 1606, 1809, 2011, 2018, 2070
BseRI	GAGGAG	4 cut(s)	80, 107, 1550, 2250
BseYI	CCCAGC	2 cut(s)	833, 2427
BsgI	GTGCAG	4 cut(s)	2158, 2285, 2341, 2366
Bsh1285I	CGRYCG	1 cut(s)	244
BshNI	GGYRCC	1 cut(s)	259
BshVI	ATCGAT	1 cut(s)	766
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	2 cut(s)	171, 508
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	3 cut(s)	278, 1110, 1992
BslFI	GGGAC	1 cut(s)	1999
BslI	CCNNNNNNNGG	9 cut(s)	186, 834, 1502, 1583, 1632, 1645, 1846, 2106, 2107
BsmAI	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
BsmBI	CGTCTC	1 cut(s)	119
BsmFI	GGGAC	1 cut(s)	1999
Bso31I	GGTCTC	1 cut(s)	2123
BsoBI	CYCGRG	1 cut(s)	1664
Bsp119I	TTCGAA	1 cut(s)	761
Bsp1286I	GDGCHC	2 cut(s)	171, 508
Bsp13I	TCCGGA	1 cut(s)	1109
Bsp1407I	TGTACA	2 cut(s)	700, 1782
Bsp143I	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
BspACI	CCGC	9 cut(s)	244, 776, 2073, 2083, 2224, 2271, 2373, 2391, 2501
BspCNI	CTCAG	2 cut(s)	1575, 1670
BspDI	ATCGAT	1 cut(s)	766
BspEI	TCCGGA	1 cut(s)	1109
BspLI	GGNNCC	8 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649, 2256
BspMAI	CTGCAG	4 cut(s)	2209, 2215, 2237, 2508
BspMI	ACCTGC	6 cut(s)	1516, 2104, 2212, 2353, 2369, 2422
BspPI	GGATC	9 cut(s)	970, 1025, 1389, 1402, 1443, 1463, 1630, 1643, 2122
BspT104I	TTCGAA	1 cut(s)	761
BspT107I	GGYRCC	1 cut(s)	259
BspTNI	GGTCTC	1 cut(s)	2123
BsrDI	GCAATG	2 cut(s)	951, 2046
BsrGI	TGTACA	2 cut(s)	700, 1782
BsrI	ACTGG	8 cut(s)	1423, 1504, 1546, 1606, 1809, 2011, 2018, 2070
BssECI	CCNNGG	2 cut(s)	1725, 2250
BssMI	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
BssT1I	CCWWGG	1 cut(s)	1725
Bst2UI	CCWGG	2 cut(s)	145, 2252
Bst4CI	ACNGT	5 cut(s)	337, 346, 905, 1927, 2471
Bst6I	CTCTTC	3 cut(s)	24, 89, 1129
BstAPI	GCANNNNNTGC	5 cut(s)	259, 1572, 2204, 2232, 2241
BstAUI	TGTACA	2 cut(s)	700, 1782
BstBAI	YACGTR	1 cut(s)	2536
BstBI	TTCGAA	1 cut(s)	761
BstDEI	CTNAG	9 cut(s)	44, 264, 459, 617, 1330, 1562, 1657, 1802, 2157
BstH2I	RGCGCY	1 cut(s)	2434
BstHHI	GCGC	4 cut(s)	645, 1075, 1493, 2433
BstKTI	GATC	8 cut(s)	770, 965, 1033, 1397, 1451, 1471, 1638, 2117
BstMAI	GTCTC	5 cut(s)	119, 357, 865, 1916, 2123
BstMBI	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
BstMCI	CGRYCG	1 cut(s)	244
BstNI	CCWGG	2 cut(s)	145, 2252
BstNSI	RCATGY	6 cut(s)	393, 892, 913, 1303, 2397, 2543
BstPAI	GACNNNNGTC	1 cut(s)	857
BstSCI	CCNGG	2 cut(s)	143, 2250
BstSFI	CTRYAG	5 cut(s)	1693, 2205, 2211, 2233, 2504
BstV2I	GAAGAC	1 cut(s)	1000
BstX2I	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
BstYI	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
Bsu15I	ATCGAT	1 cut(s)	766
Bsu36I	CCTNAGG	1 cut(s)	264
BsuTUI	ATCGAT	1 cut(s)	766
BtgZI	GCGATG	2 cut(s)	136, 1980
BtsI	GCAGTG	2 cut(s)	1622, 2146
BtsIMutI	CAGTG	8 cut(s)	777, 1001, 1416, 1539, 1622, 1974, 2063, 2146
BveI	ACCTGC	6 cut(s)	1516, 2104, 2212, 2353, 2369, 2422
CaiI	CAGNNNCTG	3 cut(s)	1265, 2232, 2241
CfoI	GCGC	4 cut(s)	645, 1075, 1493, 2433
Cfr13I	GGNCC	8 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729, 2229
ClaI	ATCGAT	1 cut(s)	766
CseI	GACGC	1 cut(s)	803
Csp6I	GTAC	4 cut(s)	701, 1783, 1798, 2027
CspCI	CAANNNNNGTGG	2 cut(s)	1514, 1549
CviQI	GTAC	4 cut(s)	701, 1783, 1798, 2027
DdeI	CTNAG	9 cut(s)	44, 264, 459, 617, 1330, 1562, 1657, 1802, 2157
DpnI	GATC	8 cut(s)	769, 964, 1032, 1396, 1450, 1470, 1637, 2116
DpnII	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
DriI	GACNNNNNGTC	1 cut(s)	1136
EaeI	YGGCCR	3 cut(s)	3, 806, 2067
Eam1104I	CTCTTC	3 cut(s)	24, 89, 1129
Eam1105I	GACNNNNNGTC	1 cut(s)	1136
EarI	CTCTTC	3 cut(s)	24, 89, 1129
Ecl136II	GAGCTC	2 cut(s)	169, 506
Eco130I	CCWWGG	1 cut(s)	1725
Eco24I	GRGCYC	2 cut(s)	171, 508
Eco31I	GGTCTC	1 cut(s)	2123
Eco32I	GATATC	1 cut(s)	1411
Eco47I	GGWCC	2 cut(s)	147, 1505
Eco53kI	GAGCTC	2 cut(s)	169, 506
Eco57I	CTGAAG	4 cut(s)	166, 1425, 1998, 2007
Eco72I	CACGTG	1 cut(s)	2536
Eco81I	CCTNAGG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	1664
EcoICRI	GAGCTC	2 cut(s)	169, 506
EcoO109I	RGGNCCY	3 cut(s)	1097, 1648, 2229
EcoRI	GAATTC	3 cut(s)	572, 1089, 1247
EcoRII	CCWGG	2 cut(s)	143, 2250
EcoRV	GATATC	1 cut(s)	1411
EcoT14I	CCWWGG	1 cut(s)	1725
EcoT22I	ATGCAT	1 cut(s)	988
EcoT38I	GRGCYC	2 cut(s)	171, 508
ErhI	CCWWGG	1 cut(s)	1725
Esp3I	CGTCTC	1 cut(s)	119
FalI	AAGNNNNNCTT	2 cut(s)	1212, 1244
FaqI	GGGAC	1 cut(s)	1999
FauI	CCCGC	2 cut(s)	2278, 2398
FauNDI	CATATG	1 cut(s)	1047
FblI	GTMKAC	1 cut(s)	285
FriOI	GRGCYC	2 cut(s)	171, 508
FspAI	RTGCGCAY	1 cut(s)	1492
FspBI	CTAG	3 cut(s)	386, 1484, 2192
FspI	TGCGCA	2 cut(s)	644, 1492
GlaI	GCGC	4 cut(s)	644, 1074, 1492, 2432
GsaI	CCCAGC	2 cut(s)	837, 2431
GsuI	CTGGAG	1 cut(s)	1589
HaeII	RGCGCY	1 cut(s)	2434
HapII	CCGG	3 cut(s)	278, 1110, 1992
HgaI	GACGC	1 cut(s)	803
HhaI	GCGC	4 cut(s)	645, 1075, 1493, 2433
Hin6I	GCGC	4 cut(s)	643, 1073, 1491, 2431
HinP1I	GCGC	4 cut(s)	643, 1073, 1491, 2431
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HindIII	AAGCTT	1 cut(s)	536
HinfI	GANTC	6 cut(s)	63, 214, 763, 858, 1137, 2497
HpaII	CCGG	3 cut(s)	278, 1110, 1992
HphI	GGTGA	8 cut(s)	187, 415, 514, 607, 1243, 1696, 1993, 2255
Hpy166II	GTNNAC	9 cut(s)	177, 223, 286, 340, 818, 901, 1505, 1785, 2511
Hpy188I	TCNGA	6 cut(s)	403, 664, 852, 1040, 1823, 1921
Hpy188III	TCNNGA	6 cut(s)	543, 795, 1086, 1110, 1633, 1664
Hpy8I	GTNNAC	9 cut(s)	177, 223, 286, 340, 818, 901, 1505, 1785, 2511
HpyAV	CCTTC	8 cut(s)	190, 436, 592, 668, 1237, 1276, 1964, 2428
HpyCH4III	ACNGT	5 cut(s)	337, 346, 905, 1927, 2471
HpyCH4IV	ACGT	4 cut(s)	706, 897, 2336, 2535
HpyF3I	CTNAG	9 cut(s)	44, 264, 459, 617, 1330, 1562, 1657, 1802, 2157
HpySE526I	ACGT	4 cut(s)	706, 897, 2336, 2535
HspAI	GCGC	4 cut(s)	643, 1073, 1491, 2431
Kpn2I	TCCGGA	1 cut(s)	1109
Kzo9I	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
LmnI	GCTCC	4 cut(s)	511, 886, 2353, 2532
LweI	GCATC	4 cut(s)	455, 1188, 1258, 1478
MaeI	CTAG	3 cut(s)	386, 1484, 2192
MaeII	ACGT	4 cut(s)	706, 897, 2336, 2535
MaeIII	GTNAC	3 cut(s)	295, 905, 1936
MalI	GATC	8 cut(s)	769, 964, 1032, 1396, 1450, 1470, 1637, 2116
MboI	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
MflI	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
MhlI	GDGCHC	2 cut(s)	171, 508
MlsI	TGGCCA	2 cut(s)	5, 2069
MluNI	TGGCCA	2 cut(s)	5, 2069
MlyI	GAGTC	3 cut(s)	72, 867, 1146
MmeI	TCCRAC	5 cut(s)	743, 1153, 1324, 1424, 2554
Mox20I	TGGCCA	2 cut(s)	5, 2069
Mph1103I	ATGCAT	1 cut(s)	988
MroI	TCCGGA	1 cut(s)	1109
MroXI	GAANNNNTTC	1 cut(s)	1247
MscI	TGGCCA	2 cut(s)	5, 2069
MseI	TTAA	1 cut(s)	2057
MslI	CAYNNNNRTG	5 cut(s)	27, 197, 1760, 2039, 2538
Msp20I	TGGCCA	2 cut(s)	5, 2069
MspA1I	CMGCKG	3 cut(s)	1262, 2210, 2503
MspI	CCGG	3 cut(s)	278, 1110, 1992
MspR9I	CCNGG	2 cut(s)	145, 2252
MvaI	CCWGG	2 cut(s)	145, 2252
NdeI	CATATG	1 cut(s)	1047
NdeII	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
NlaIV	GGNNCC	8 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649, 2256
NmuCI	GTSAC	2 cut(s)	295, 905
NsbI	TGCGCA	2 cut(s)	644, 1492
NsiI	ATGCAT	1 cut(s)	988
NspI	RCATGY	6 cut(s)	393, 892, 913, 1303, 2397, 2543
NspV	TTCGAA	1 cut(s)	761
PaeI	GCATGC	2 cut(s)	393, 2397
PaqCI	CACCTGC	3 cut(s)	2104, 2369, 2422
PciI	ACATGT	1 cut(s)	909
PcsI	WCGNNNNNNNCGW	1 cut(s)	811
PdmI	GAANNNNTTC	1 cut(s)	1247
PfeI	GAWTC	3 cut(s)	214, 763, 2497
PflMI	CCANNNNNTGG	1 cut(s)	1846
PleI	GAGTC	3 cut(s)	71, 866, 1145
PmaCI	CACGTG	1 cut(s)	2536
PmlI	CACGTG	1 cut(s)	2536
PpsI	GAGTC	3 cut(s)	71, 866, 1145
Ppu21I	YACGTR	1 cut(s)	2536
PscI	ACATGT	1 cut(s)	909
PshAI	GACNNNNGTC	1 cut(s)	857
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	2 cut(s)	171, 508
Psp6I	CCWGG	2 cut(s)	143, 2250
PspCI	CACGTG	1 cut(s)	2536
PspFI	CCCAGC	2 cut(s)	833, 2427
PspGI	CCWGG	2 cut(s)	143, 2250
PspN4I	GGNNCC	8 cut(s)	261, 471, 838, 1098, 1396, 1637, 1649, 2256
PspPI	GGNCC	8 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729, 2229
PsrI	GAACNNNNNNTAC	2 cut(s)	330, 362
PstI	CTGCAG	4 cut(s)	2209, 2215, 2237, 2508
PstNI	CAGNNNCTG	3 cut(s)	1265, 2232, 2241
PsuI	RGATCY	4 cut(s)	1394, 1448, 1468, 1635
PvuII	CAGCTG	2 cut(s)	1262, 2210
RsaI	GTAC	4 cut(s)	702, 1784, 1799, 2028
RsaNI	GTAC	4 cut(s)	701, 1783, 1798, 2027
RseI	CAYNNNNRTG	5 cut(s)	27, 197, 1760, 2039, 2538
SacI	GAGCTC	2 cut(s)	171, 508
SaqAI	TTAA	1 cut(s)	2057
Sau3AI	GATC	8 cut(s)	767, 962, 1030, 1394, 1448, 1468, 1635, 2114
Sau96I	GGNCC	8 cut(s)	147, 837, 1097, 1505, 1536, 1648, 1729, 2229
SchI	GAGTC	3 cut(s)	72, 867, 1146
ScrFI	CCNGG	2 cut(s)	145, 2252
SduI	GDGCHC	2 cut(s)	171, 508
SfaNI	GCATC	4 cut(s)	455, 1188, 1258, 1478
SfcI	CTRYAG	5 cut(s)	1693, 2205, 2211, 2233, 2504
SfuI	TTCGAA	1 cut(s)	761
SinI	GGWCC	2 cut(s)	147, 1505
SmiMI	CAYNNNNRTG	5 cut(s)	27, 197, 1760, 2039, 2538
SmlI	CTYRAG	3 cut(s)	317, 1002, 2546
SmoI	CTYRAG	3 cut(s)	317, 1002, 2546
SphI	GCATGC	2 cut(s)	393, 2397
SsiI	CCGC	9 cut(s)	244, 776, 2073, 2083, 2224, 2271, 2373, 2391, 2501
SspMI	CTAG	3 cut(s)	386, 1484, 2192
SstI	GAGCTC	2 cut(s)	171, 508
StyD4I	CCNGG	2 cut(s)	143, 2250
StyI	CCWWGG	1 cut(s)	1725
TaaI	ACNGT	5 cut(s)	337, 346, 905, 1927, 2471
TaiI	ACGT	4 cut(s)	709, 900, 2339, 2538
TaqI	TCGA	6 cut(s)	449, 630, 761, 766, 1215, 2473
TatI	WGTACW	2 cut(s)	700, 1782
TauI	GCSGC	3 cut(s)	778, 2086, 2226
TfiI	GAWTC	3 cut(s)	214, 763, 2497
Tru1I	TTAA	1 cut(s)	2057
Tru9I	TTAA	1 cut(s)	2057
TscAI	CASTG	8 cut(s)	777, 1001, 1423, 1546, 1622, 1981, 2070, 2146
TseFI	GTSAC	2 cut(s)	295, 905
Tsp45I	GTSAC	2 cut(s)	295, 905
TspGWI	ACGGA	2 cut(s)	1092, 1957
TspRI	CASTG	8 cut(s)	777, 1001, 1423, 1546, 1622, 1981, 2070, 2146
Van91I	CCANNNNNTGG	1 cut(s)	1846
VpaK11BI	GGWCC	2 cut(s)	147, 1505
XapI	RAATTY	5 cut(s)	572, 1080, 1089, 1247, 1997
XceI	RCATGY	6 cut(s)	393, 892, 913, 1303, 2397, 2543
XmiI	GTMKAC	1 cut(s)	285
XmnI	GAANNNNTTC	1 cut(s)	1247
XspI	CTAG	3 cut(s)	386, 1484, 2192
Zsp2I	ATGCAT	1 cut(s)	988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.