Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

78905093 .. 78911134

Gene Structure 6042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG560300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGCCAACTCAAATTCTCTTCCTCTCTATGAAAGGGTTGAGCACAAAAACACACTGCATAAAGTCATGGAGTTTATAATCCTTTTCCTCCTCCTGTCACTCCTTGTTTATCGTCTCCTCTCTTTCAACAACCATGGTTTATCCTGGTCCATCGCATTTCTCTGCGAGCTCTGGTTTACCTTCAGTTGGACCATCACCATCAGCAACAAATGGAATCTTGTTGAACATAAACCGTACCCGGACCGTCTCTTGCAACGGGTGCCTAAGGATGGGCTTCCAGCAGTGGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATGATTACCATAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACACACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCAAAGTTTGCTAAGATTTGGGTTCCCTTTTGTAAAAAGTACAATGTTCAAGTTAGAGCACCTTTTAGATTCTTCTCCAATGATTCCACGCTTTCTGGAAACAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGATAGTGAAGGATGAGTATGAGCAACTTAGCAGCAAAATCGAGGATGTGGTGCGCAAATCTATCAATCCATCTGATATTATCGAAGGCGACTTTTCTGCTTTCTCAAATGTCCAACGTAATAATCATCCAACCATAATCAAGGTTGTTTGGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCACATTTAGTCTATTTATCCAGAGAAAAACGGCCAAAGCATCCACATCATGCCAAAGCCGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACTAATGCTCCATACATGCTAAACGTGGACTGTGACATGTTCGCCAACAGCCAGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCGTTTGTTCAGTATCCTCAAGTCTTCTATGACGGTCTGAAGGATGATCCTTTTGGAAATCAGATGACAGTTTTGTGGAAGTATGTAGGACAAGGAATTTCAGGAATTCAGGGACCTTTTTATTCCGGAACAGGATGTGTTCATAGACGAAAAGTCATCTATGGTCTATCCCCCAATTATGTGAAAGTTGGAGAAACAAATGCAGAAAGCATGATGCACGGTAAATCAGCTGATGAAGAGTTACTCAATGTATTTGGGAAGGAATTTACCAAATCAGCTGCTGATGCTTTAAACGGGAAGGCAGTGTGTCCAGACATGCTTACAGAAACTATTGAGGCTGTATACCAAGTTGCTGGTGTTGGATATGAGTATGGCACACATTGGGGCAAAAAGGTGGGATGGATGTATGGATCCACAACTGAAGATGTGCTCACTGGCCTTTCAATCCATAACAAAGGTTGGAGATCCATTATTTATGCACCTAACCCACCAGCCTTTCTAGGATGTGCGCCTACCGGTGGGCCTGCTGCAATGACCCAACAAAAAAGGTGGGCCACCGGCCTGCTTGAAATCCTCCTCAGCAAAAACTTCCCCATATTTGGCACTCTCTTTGCAAACCTCCAGTTCAGGCAGTGCTTGGGCTACTTCTGGATCCTTTCATGGGGGCTACGCTCAGTTCCCGAGCTGTGCTATGCTGCTTTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCCAAGGGCCAAGAACCAGCTTACTATATACCCATAGCTGTGTTTCTGATCTACAATATGTACACTTTATCAGAGTACCTTAGAACCAGTCTATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAACCACAATGAGTGCATGGCTTTTTGGACTTCTTGGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTTGAAGTAACACGGAAAGACCAATCTACTTCAAGTGATCAAGGCGCTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAATTTTCGTACCTCCCACAGCAATGTTGCTTCTGCAATTAACAGCACTGGCCACCGCTTTGTTGCGGCTTCAACCACCAGCCCGTGATGGGGTGGGATCAGGCTCTTTGGAGACCATGTGCAGTGTTTCGTTAGTGGTATGCTTATGGCCATTTTTGAAAGGTCTGTTTGGATCAGGAAAGTATGGAATTCCTCTATCTACCATATTTAAATCTGTTGGTCTTGCACTACTCTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

756

Amino Acids

84.91

Weight (kDa)

8.22

Isoelectric Point (pI)

38.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	95 - 393	1.1e-86	Cellulose synthase
Cellulose_synt	PF03552	412 - 747	1.1e-51	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
Acc16I	TGCGCA	1 cut(s)	641
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	1 cut(s)	1843
AccI	GTMKAC	1 cut(s)	1323
AccIII	TCCGGA	1 cut(s)	1106
AciI	CCGC	2 cut(s)	2070, 2080
AclWI	GGATC	9 cut(s)	967, 1022, 1386, 1399, 1440, 1627, 1640, 2119, 2194
AcoI	YGGCCR	4 cut(s)	3, 803, 2064, 2162
AcsI	RAATTY	7 cut(s)	13, 569, 1077, 1086, 1244, 1994, 2202
AcuI	CTGAAG	5 cut(s)	166, 1040, 1422, 1995, 2004
AdeI	CACNNNGTG	1 cut(s)	2259
AfaI	GTAC	5 cut(s)	236, 488, 1781, 1796, 2025
AfiI	CCNNNNNNNGG	9 cut(s)	186, 269, 831, 1499, 1580, 1642, 1843, 2103, 2104
AflIII	ACRYGT	1 cut(s)	906
AgeI	ACCGGT	1 cut(s)	1496
AhdI	GACNNNNNGTC	1 cut(s)	1133
AjnI	CCWGG	1 cut(s)	143
AjuI	GAANNNNNNNTTGG	2 cut(s)	1697, 1729
AluBI	AGCT	8 cut(s)	169, 316, 561, 1211, 1259, 1666, 1739, 1757
AluI	AGCT	8 cut(s)	169, 316, 561, 1211, 1259, 1666, 1739, 1757
Alw21I	GWGCWC	4 cut(s)	45, 171, 508, 1413
Alw26I	GTCTC	6 cut(s)	119, 251, 357, 862, 1913, 2120
AlwI	GGATC	9 cut(s)	967, 1022, 1386, 1399, 1440, 1627, 1640, 2119, 2194
AlwNI	CAGNNNCTG	1 cut(s)	1262
Ama87I	CYCGRG	1 cut(s)	1661
Aor13HI	TCCGGA	1 cut(s)	1106
ApeKI	GCWGC	4 cut(s)	618, 1259, 1508, 1676
ApoI	RAATTY	7 cut(s)	13, 569, 1077, 1086, 1244, 1994, 2202
AsiGI	ACCGGT	1 cut(s)	1496
AspLEI	GCGC	3 cut(s)	642, 1492, 1973
AspS9I	GGNCC	8 cut(s)	147, 189, 241, 834, 1094, 1502, 1533, 1726
AsuC2I	CCSGG	2 cut(s)	239, 832
AsuHPI	GGTGA	4 cut(s)	187, 415, 1693, 1990
AsuII	TTCGAA	1 cut(s)	758
AvaI	CYCGRG	1 cut(s)	1661
AvaII	GGWCC	4 cut(s)	147, 189, 241, 1094
AxyI	CCTNAGG	1 cut(s)	264
BalI	TGGCCA	3 cut(s)	5, 2066, 2164
BamHI	GGATCC	2 cut(s)	1391, 1632
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	1 cut(s)	171
BbsI	GAAGAC	1 cut(s)	997
Bbv12I	GWGCWC	4 cut(s)	45, 171, 508, 1413
BbvCI	CCTCAGC	1 cut(s)	1559
BbvI	GCAGC	4 cut(s)	630, 1246, 1495, 1663
BccI	CCATC	8 cut(s)	158, 200, 206, 263, 401, 664, 1374, 2096
BceAI	ACGGC	1 cut(s)	818
BcgI	CGANNNNNNTGC	4 cut(s)	607, 641, 665, 699
BciT130I	CCWGG	1 cut(s)	145
BciVI	GTATCC	1 cut(s)	1005
BclI	TGATCA	1 cut(s)	1963
BcnI	CCSGG	2 cut(s)	239, 832
BcoDI	GTCTC	6 cut(s)	119, 251, 357, 862, 1913, 2120
BfaI	CTAG	3 cut(s)	386, 852, 1481
BfmI	CTRYAG	1 cut(s)	1690
BfoI	RGCGCY	1 cut(s)	1974
BfuI	GTATCC	1 cut(s)	1005
BisI	GCNGC	5 cut(s)	619, 1260, 1509, 1677, 2081
BlsI	GCNGC	5 cut(s)	620, 1261, 1510, 1678, 2082
Bme1390I	CCNGG	3 cut(s)	145, 239, 832
Bme18I	GGWCC	4 cut(s)	147, 189, 241, 1094
BmeRI	GACNNNNNGTC	1 cut(s)	1133
BmeT110I	CYCGRG	1 cut(s)	1661
BmgT120I	GGNCC	8 cut(s)	147, 189, 241, 834, 1094, 1502, 1533, 1726
BmiI	GGNNCC	6 cut(s)	261, 471, 835, 1095, 1393, 1634
BmrFI	CCNGG	3 cut(s)	145, 239, 832
BmsI	GCATC	4 cut(s)	455, 820, 1185, 1255
BoxI	GACNNNNGTC	1 cut(s)	854
BpiI	GAAGAC	1 cut(s)	997
BpmI	CTGGAG	1 cut(s)	1586
Bpu10I	CCTNAGC	1 cut(s)	1559
Bpu14I	TTCGAA	1 cut(s)	758
BpuEI	CTTGAG	1 cut(s)	984
BpuMI	CCSGG	2 cut(s)	239, 832
Bsa29I	ATCGAT	1 cut(s)	763
BsaI	GGTCTC	1 cut(s)	2120
BsaJI	CCNNGG	3 cut(s)	133, 831, 1722
BsaWI	WCCGGW	2 cut(s)	1106, 1496
BsaXI	ACNNNNNCTCC	4 cut(s)	862, 892, 2117, 2147
Bsc4I	CCNNNNNNNGG	9 cut(s)	186, 269, 831, 1499, 1580, 1642, 1843, 2103, 2104
Bse118I	RCCGGY	2 cut(s)	1496, 1538
Bse1I	ACTGG	5 cut(s)	1420, 1603, 1806, 2008, 2067
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	3 cut(s)	948, 1518, 2043
BseAI	TCCGGA	1 cut(s)	1106
BseBI	CCWGG	1 cut(s)	145
BseCI	ATCGAT	1 cut(s)	763
BseDI	CCNNGG	3 cut(s)	133, 831, 1722
BseLI	CCNNNNNNNGG	9 cut(s)	186, 269, 831, 1499, 1580, 1642, 1843, 2103, 2104
BseMI	GCAATG	3 cut(s)	948, 1518, 2043
BseMII	CTCAG	2 cut(s)	1573, 1668
BseNI	ACTGG	5 cut(s)	1420, 1603, 1806, 2008, 2067
BseRI	GAGGAG	3 cut(s)	80, 107, 1547
BseXI	GCAGC	4 cut(s)	630, 1246, 1495, 1663
BsgI	GTGCAG	1 cut(s)	2155
BshNI	GGYRCC	1 cut(s)	259
BshTI	ACCGGT	1 cut(s)	1496
BshVI	ATCGAT	1 cut(s)	763
BsiHKAI	GWGCWC	4 cut(s)	45, 171, 508, 1413
BsiHKCI	CYCGRG	1 cut(s)	1661
BsiSI	CCGG	6 cut(s)	239, 831, 1107, 1497, 1539, 1989
BslFI	GGGAC	2 cut(s)	1107, 1996
BslI	CCNNNNNNNGG	9 cut(s)	186, 269, 831, 1499, 1580, 1642, 1843, 2103, 2104
BsmAI	GTCTC	6 cut(s)	119, 251, 357, 862, 1913, 2120
BsmBI	CGTCTC	2 cut(s)	119, 251
BsmFI	GGGAC	2 cut(s)	1107, 1996
Bso31I	GGTCTC	1 cut(s)	2120
BsoBI	CYCGRG	1 cut(s)	1661
Bsp119I	TTCGAA	1 cut(s)	758
Bsp1286I	GDGCHC	4 cut(s)	45, 171, 508, 1413
Bsp13I	TCCGGA	1 cut(s)	1106
Bsp1407I	TGTACA	1 cut(s)	1779
Bsp19I	CCATGG	1 cut(s)	133
BspACI	CCGC	2 cut(s)	2070, 2080
BspCNI	CTCAG	2 cut(s)	1572, 1667
BspDI	ATCGAT	1 cut(s)	763
BspEI	TCCGGA	1 cut(s)	1106
BspLI	GGNNCC	6 cut(s)	261, 471, 835, 1095, 1393, 1634
BspPI	GGATC	9 cut(s)	967, 1022, 1386, 1399, 1440, 1627, 1640, 2119, 2194
BspT104I	TTCGAA	1 cut(s)	758
BspT107I	GGYRCC	1 cut(s)	259
BspTNI	GGTCTC	1 cut(s)	2120
BsrDI	GCAATG	3 cut(s)	948, 1518, 2043
BsrFI	RCCGGY	2 cut(s)	1496, 1538
BsrGI	TGTACA	1 cut(s)	1779
BsrI	ACTGG	5 cut(s)	1420, 1603, 1806, 2008, 2067
BssAI	RCCGGY	2 cut(s)	1496, 1538
BssECI	CCNNGG	3 cut(s)	133, 831, 1722
BssNAI	GTATAC	1 cut(s)	1324
BssT1I	CCWWGG	2 cut(s)	133, 1722
Bst1107I	GTATAC	1 cut(s)	1324
Bst2UI	CCWGG	1 cut(s)	145
Bst4CI	ACNGT	8 cut(s)	234, 245, 346, 902, 1016, 1051, 1202, 1924
Bst6I	CTCTTC	3 cut(s)	24, 1212, 2252
BstAPI	GCANNNNNTGC	1 cut(s)	259
BstAUI	TGTACA	1 cut(s)	1779
BstBI	TTCGAA	1 cut(s)	758
BstC8I	GCNNGC	5 cut(s)	167, 391, 1506, 1544, 1686
BstDEI	CTNAG	6 cut(s)	264, 459, 614, 1559, 1654, 1799
BstDSI	CCRYGG	1 cut(s)	133
BstH2I	RGCGCY	1 cut(s)	1974
BstHHI	GCGC	3 cut(s)	642, 1492, 1973
BstMAI	GTCTC	6 cut(s)	119, 251, 357, 862, 1913, 2120
BstMWI	GCNNNNNNNGC	3 cut(s)	259, 1265, 1685
BstNI	CCWGG	1 cut(s)	145
BstNSI	RCATGY	4 cut(s)	393, 889, 910, 1300
BstPAI	GACNNNNGTC	1 cut(s)	854
BstSCI	CCNGG	3 cut(s)	143, 237, 830
BstSFI	CTRYAG	1 cut(s)	1690
BstV1I	GCAGC	4 cut(s)	630, 1246, 1495, 1663
BstV2I	GAAGAC	1 cut(s)	997
BstX2I	RGATCY	3 cut(s)	1391, 1445, 1632
BstXI	CCANNNNNNTGG	1 cut(s)	1334
BstYI	RGATCY	3 cut(s)	1391, 1445, 1632
BstZ17I	GTATAC	1 cut(s)	1324
Bsu15I	ATCGAT	1 cut(s)	763
Bsu36I	CCTNAGG	1 cut(s)	264
BsuI	GTATCC	1 cut(s)	1005
BsuTUI	ATCGAT	1 cut(s)	763
BtgI	CCRYGG	1 cut(s)	133
BtgZI	GCGATG	1 cut(s)	136
BtsI	GCAGTG	5 cut(s)	53, 288, 1290, 1619, 2143
BtsIMutI	CAGTG	8 cut(s)	53, 288, 774, 1290, 1413, 1619, 2060, 2143
Cac8I	GCNNGC	5 cut(s)	167, 391, 1506, 1544, 1686
CaiI	CAGNNNCTG	1 cut(s)	1262
CfoI	GCGC	3 cut(s)	642, 1492, 1973
Cfr10I	RCCGGY	2 cut(s)	1496, 1538
Cfr13I	GGNCC	8 cut(s)	147, 189, 241, 834, 1094, 1502, 1533, 1726
ClaI	ATCGAT	1 cut(s)	763
CpoI	CGGWCCG	1 cut(s)	241
Csp6I	GTAC	5 cut(s)	235, 487, 1780, 1795, 2024
CspAI	ACCGGT	1 cut(s)	1496
CspCI	CAANNNNNGTGG	2 cut(s)	1511, 1546
CspI	CGGWCCG	1 cut(s)	241
CviQI	GTAC	5 cut(s)	235, 487, 1780, 1795, 2024
DdeI	CTNAG	6 cut(s)	264, 459, 614, 1559, 1654, 1799
DraI	TTTAAA	2 cut(s)	1272, 2224
DraIII	CACNNNGTG	1 cut(s)	2259
DriI	GACNNNNNGTC	1 cut(s)	1133
EaeI	YGGCCR	4 cut(s)	3, 803, 2064, 2162
Eam1104I	CTCTTC	3 cut(s)	24, 1212, 2252
Eam1105I	GACNNNNNGTC	1 cut(s)	1133
EarI	CTCTTC	3 cut(s)	24, 1212, 2252
Ecl136II	GAGCTC	1 cut(s)	169
Eco130I	CCWWGG	2 cut(s)	133, 1722
Eco24I	GRGCYC	1 cut(s)	171
Eco31I	GGTCTC	1 cut(s)	2120
Eco47I	GGWCC	4 cut(s)	147, 189, 241, 1094
Eco53kI	GAGCTC	1 cut(s)	169
Eco57I	CTGAAG	5 cut(s)	166, 1040, 1422, 1995, 2004
Eco81I	CCTNAGG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	1661
EcoICRI	GAGCTC	1 cut(s)	169
EcoO109I	RGGNCCY	1 cut(s)	1094
EcoRI	GAATTC	3 cut(s)	569, 1086, 2202
EcoRII	CCWGG	1 cut(s)	143
EcoT14I	CCWWGG	2 cut(s)	133, 1722
EcoT38I	GRGCYC	1 cut(s)	171
ErhI	CCWWGG	2 cut(s)	133, 1722
Esp3I	CGTCTC	2 cut(s)	119, 251
FaqI	GGGAC	2 cut(s)	1107, 1996
FbaI	TGATCA	1 cut(s)	1963
FblI	GTMKAC	1 cut(s)	1323
Fnu4HI	GCNGC	5 cut(s)	619, 1260, 1509, 1677, 2081
FriOI	GRGCYC	1 cut(s)	171
Fsp4HI	GCNGC	5 cut(s)	619, 1260, 1509, 1677, 2081
FspBI	CTAG	3 cut(s)	386, 852, 1481
FspI	TGCGCA	1 cut(s)	641
GlaI	GCGC	3 cut(s)	641, 1491, 1972
GluI	GCNGC	5 cut(s)	619, 1260, 1509, 1677, 2081
GsuI	CTGGAG	1 cut(s)	1586
HaeII	RGCGCY	1 cut(s)	1974
HapII	CCGG	6 cut(s)	239, 831, 1107, 1497, 1539, 1989
HhaI	GCGC	3 cut(s)	642, 1492, 1973
Hin6I	GCGC	3 cut(s)	640, 1490, 1971
HinP1I	GCGC	3 cut(s)	640, 1490, 1971
HinfI	GANTC	5 cut(s)	214, 516, 530, 760, 855
HpaII	CCGG	6 cut(s)	239, 831, 1107, 1497, 1539, 1989
HphI	GGTGA	4 cut(s)	187, 415, 1693, 1990
Hpy166II	GTNNAC	5 cut(s)	177, 286, 898, 1324, 1782
Hpy188I	TCNGA	9 cut(s)	403, 661, 849, 1020, 1044, 1767, 1792, 1820, 1918
Hpy188III	TCNNGA	8 cut(s)	543, 792, 1083, 1107, 1292, 1630, 1661, 2190
Hpy8I	GTNNAC	5 cut(s)	177, 286, 898, 1324, 1782
HpyAV	CCTTC	7 cut(s)	190, 436, 589, 665, 1015, 1234, 1273
HpyCH4III	ACNGT	8 cut(s)	234, 245, 346, 902, 1016, 1051, 1202, 1924
HpyCH4IV	ACGT	2 cut(s)	703, 894
HpyF10VI	GCNNNNNNNGC	3 cut(s)	259, 1265, 1685
HpyF3I	CTNAG	6 cut(s)	264, 459, 614, 1559, 1654, 1799
HpySE526I	ACGT	2 cut(s)	703, 894
HspAI	GCGC	3 cut(s)	640, 1490, 1971
Kpn2I	TCCGGA	1 cut(s)	1106
Ksp22I	TGATCA	1 cut(s)	1963
LmnI	GCTCC	1 cut(s)	883
Lsp1109I	GCAGC	4 cut(s)	630, 1246, 1495, 1663
LweI	GCATC	4 cut(s)	455, 820, 1185, 1255
MaeI	CTAG	3 cut(s)	386, 852, 1481
MaeII	ACGT	2 cut(s)	703, 894
MaeIII	GTNAC	5 cut(s)	96, 295, 902, 1221, 1933
MflI	RGATCY	3 cut(s)	1391, 1445, 1632
MhlI	GDGCHC	4 cut(s)	45, 171, 508, 1413
MlsI	TGGCCA	3 cut(s)	5, 2066, 2164
MluNI	TGGCCA	3 cut(s)	5, 2066, 2164
MlyI	GAGTC	1 cut(s)	864
MmeI	TCCRAC	6 cut(s)	167, 724, 740, 1150, 1321, 1421
Mox20I	TGGCCA	3 cut(s)	5, 2066, 2164
MroI	TCCGGA	1 cut(s)	1106
MscI	TGGCCA	3 cut(s)	5, 2066, 2164
MseI	TTAA	3 cut(s)	1271, 2054, 2223
MslI	CAYNNNNRTG	2 cut(s)	1757, 2036
Msp20I	TGGCCA	3 cut(s)	5, 2066, 2164
MspA1I	CMGCKG	2 cut(s)	1211, 1259
MspI	CCGG	6 cut(s)	239, 831, 1107, 1497, 1539, 1989
MspR9I	CCNGG	3 cut(s)	145, 239, 832
MvaI	CCWGG	1 cut(s)	145
MwoI	GCNNNNNNNGC	3 cut(s)	259, 1265, 1685
NciI	CCSGG	2 cut(s)	239, 832
NcoI	CCATGG	1 cut(s)	133
NlaIV	GGNNCC	6 cut(s)	261, 471, 835, 1095, 1393, 1634
NmuCI	GTSAC	3 cut(s)	96, 295, 902
NsbI	TGCGCA	1 cut(s)	641
NspI	RCATGY	4 cut(s)	393, 889, 910, 1300
NspV	TTCGAA	1 cut(s)	758
PaeI	GCATGC	1 cut(s)	393
PciI	ACATGT	1 cut(s)	906
PfeI	GAWTC	4 cut(s)	214, 516, 530, 760
PflMI	CCANNNNNTGG	1 cut(s)	1843
PinAI	ACCGGT	1 cut(s)	1496
PkrI	GCNGC	5 cut(s)	620, 1261, 1510, 1678, 2082
PleI	GAGTC	1 cut(s)	863
PpsI	GAGTC	1 cut(s)	863
PpuMI	RGGWCCY	1 cut(s)	1094
PscI	ACATGT	1 cut(s)	906
PshAI	GACNNNNGTC	1 cut(s)	854
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	1 cut(s)	171
Psp5II	RGGWCCY	1 cut(s)	1094
Psp6I	CCWGG	1 cut(s)	143
PspGI	CCWGG	1 cut(s)	143
PspN4I	GGNNCC	6 cut(s)	261, 471, 835, 1095, 1393, 1634
PspPI	GGNCC	8 cut(s)	147, 189, 241, 834, 1094, 1502, 1533, 1726
PspPPI	RGGWCCY	1 cut(s)	1094
PstNI	CAGNNNCTG	1 cut(s)	1262
PsuI	RGATCY	3 cut(s)	1391, 1445, 1632
PvuII	CAGCTG	2 cut(s)	1211, 1259
RsaI	GTAC	5 cut(s)	236, 488, 1781, 1796, 2025
RsaNI	GTAC	5 cut(s)	235, 487, 1780, 1795, 2024
RseI	CAYNNNNRTG	2 cut(s)	1757, 2036
Rsr2I	CGGWCCG	1 cut(s)	241
RsrII	CGGWCCG	1 cut(s)	241
SacI	GAGCTC	1 cut(s)	171
SaqAI	TTAA	3 cut(s)	1271, 2054, 2223
SatI	GCNGC	5 cut(s)	619, 1260, 1509, 1677, 2081
Sau96I	GGNCC	8 cut(s)	147, 189, 241, 834, 1094, 1502, 1533, 1726
SchI	GAGTC	1 cut(s)	864
ScrFI	CCNGG	3 cut(s)	145, 239, 832
SduI	GDGCHC	4 cut(s)	45, 171, 508, 1413
SfaNI	GCATC	4 cut(s)	455, 820, 1185, 1255
SfcI	CTRYAG	1 cut(s)	1690
SfuI	TTCGAA	1 cut(s)	758
SinI	GGWCC	4 cut(s)	147, 189, 241, 1094
SmiI	ATTTAAAT	1 cut(s)	2224
SmiMI	CAYNNNNRTG	2 cut(s)	1757, 2036
SmlI	CTYRAG	1 cut(s)	999
SmoI	CTYRAG	1 cut(s)	999
SphI	GCATGC	1 cut(s)	393
SsiI	CCGC	2 cut(s)	2070, 2080
SspMI	CTAG	3 cut(s)	386, 852, 1481
SstI	GAGCTC	1 cut(s)	171
StyD4I	CCNGG	3 cut(s)	143, 237, 830
StyI	CCWWGG	2 cut(s)	133, 1722
SwaI	ATTTAAAT	1 cut(s)	2224
TaaI	ACNGT	8 cut(s)	234, 245, 346, 902, 1016, 1051, 1202, 1924
TaiI	ACGT	2 cut(s)	706, 897
TaqI	TCGA	4 cut(s)	627, 669, 758, 763
TatI	WGTACW	2 cut(s)	486, 1779
TauI	GCSGC	1 cut(s)	2083
TfiI	GAWTC	4 cut(s)	214, 516, 530, 760
Tru1I	TTAA	3 cut(s)	1271, 2054, 2223
Tru9I	TTAA	3 cut(s)	1271, 2054, 2223
TscAI	CASTG	8 cut(s)	60, 288, 774, 1290, 1420, 1619, 2067, 2143
TseFI	GTSAC	3 cut(s)	96, 295, 902
TseI	GCWGC	4 cut(s)	618, 1259, 1508, 1676
Tsp45I	GTSAC	3 cut(s)	96, 295, 902
TspDTI	ATGAA	9 cut(s)	45, 594, 854, 926, 984, 990, 1112, 1230, 1629
TspGWI	ACGGA	1 cut(s)	1954
TspRI	CASTG	8 cut(s)	60, 288, 774, 1290, 1420, 1619, 2067, 2143
Van91I	CCANNNNNTGG	1 cut(s)	1843
VpaK11BI	GGWCC	4 cut(s)	147, 189, 241, 1094
XapI	RAATTY	7 cut(s)	13, 569, 1077, 1086, 1244, 1994, 2202
XceI	RCATGY	4 cut(s)	393, 889, 910, 1300
XmiI	GTMKAC	1 cut(s)	1323
XspI	CTAG	3 cut(s)	386, 852, 1481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.