Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Forward (+)

12672997 .. 12678209

Gene Structure 5213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00091040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGTTTATCCTGGTCCATCGCATTCCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCGTAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCAAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGATCTCCCTTTAGATACTTCACCAATAATTCCACGCTTTCTGGAATTAATAATACTAGCTCAATGGAATTCAAGCATGAATGGAAGAGAGTGAAGGATGAGTATGAGCAAGTTAGCAGCAAAATCGAGGATGTGGTGCGCAAATCTATCAATCCATCTGATATTATTGAATGCGACTTTTCAGTGTTCTCAAATGTACAGCGTAATGATCATCCAACAATAATCAAGGTTGTATTGGAGAACAAAGAAGCACATTTGAATCGATCGGTGCCACATTTAGTTTATATATCCAGAGAAAAACGGCCGAAGCATCCACATCATGCCAAAGCCGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACCAATGCTCCATACATGCTAAATGTGGACTGCGACATGTTTGTCAACAGCCCGAACATCATTCTTCATGCAATGTGCATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTCTTCTGTGACGGTCTAAAGGATGATCCTTTCGGAAATCAGATGATAGTTTGGTGGAAGGTGGGATGGATGTATGGATCCTCAACTGAAGATGCCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTGTTTATGCACCAGACCCACCAGCCTTTCTAGAATGCGCGCCTACTGGTGGGCCTGCTGTAATGACCCAACAGAAAAGGTGGGCCACCGGCCTGCTTGAAATCCTGCTCAGTAAAAACTGCCCCATATTTGGTACTCTCTTTGCAAACCTCCGGTTCAGGCAGTGCTTGGGCTACTTCAGTATCCTTTCATGGGGGATAAGCTCAGTTCTCGAGCTGTACTATGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCGAAGTACCTTAGAACCGGTCAATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAATCTCAATGAGTGCATGGCTTTTTGGATTTCTTAGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTCGAGGTAACACGAAAAGACCAATCTACATCAAGCGATGAAGGCACTGAAGCTACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCATACCTCCCACAGCAATGTTGTTTCTGCAATTAACAGCACTGGCCACCGCTTTGTTGGGGCTTCAACCACCAGCCCGTGATGGAGTGGAATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTGGTGGTATGCTTATTACCATTTTTGAAAGGTCTGTTTGGATCAGGAAAATATGGAATTCCTCTGTCTACCATATTTAAGTCTGCTGGTCTTGCACTACTTTTCTACACCTTGTGCAAATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

562

Amino Acids

62.44

Weight (kDa)

7.12

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	28 - 286	1.1e-75	Cellulose synthase
Cellulose_synt	PF03552	287 - 403	1.9e-25	Cellulose synthase
Cellulose_synt	PF03552	408 - 538	5.7e-09	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	710
Acc16I	TGCGCA	1 cut(s)	440
AccB1I	GGYRCC	2 cut(s)	58, 568
AccB7I	CCANNNNNTGG	1 cut(s)	1261
AccI	GTMKAC	2 cut(s)	84, 1631
AccII	CGCG	1 cut(s)	977
AciI	CCGC	1 cut(s)	1488
AclWI	GGATC	6 cut(s)	766, 821, 873, 886, 927, 1612
AcoI	YGGCCR	2 cut(s)	602, 1482
AcsI	RAATTY	3 cut(s)	368, 1412, 1620
AcuI	CTGAAG	5 cut(s)	33, 909, 1099, 1413, 1422
AdeI	CACNNNGTG	1 cut(s)	1677
AfaI	GTAC	5 cut(s)	287, 498, 1072, 1157, 1214
AfiI	CCNNNNNNNGG	7 cut(s)	53, 630, 903, 986, 1067, 1129, 1261
AflIII	ACRYGT	1 cut(s)	705
AgeI	ACCGGT	1 cut(s)	1223
AgsI	TTSAA	9 cut(s)	119, 296, 373, 470, 559, 912, 1037, 1505, 1591
AjnI	CCWGG	1 cut(s)	10
AjuI	GAANNNNNNNTTGG	2 cut(s)	1184, 1216
AluBI	AGCT	7 cut(s)	36, 73, 115, 360, 1140, 1153, 1397
AluI	AGCT	7 cut(s)	36, 73, 115, 360, 1140, 1153, 1397
Alw21I	GWGCWC	1 cut(s)	38
Alw26I	GTCTC	4 cut(s)	156, 661, 1331, 1538
AlwI	GGATC	6 cut(s)	766, 821, 873, 886, 927, 1612
Ama87I	CYCGRG	1 cut(s)	1148
AoxI	GGCC	6 cut(s)	602, 633, 989, 1020, 1027, 1482
ApeKI	GCWGC	2 cut(s)	417, 1163
ApoI	RAATTY	3 cut(s)	368, 1412, 1620
AseI	ATTAAT	1 cut(s)	348
AsiGI	ACCGGT	1 cut(s)	1223
AspLEI	GCGC	3 cut(s)	441, 977, 979
AspS9I	GGNCC	4 cut(s)	14, 633, 989, 1020
AsuC2I	CCSGG	1 cut(s)	631
AsuHPI	GGTGA	4 cut(s)	214, 313, 1180, 1408
AvaI	CYCGRG	1 cut(s)	1148
AvaII	GGWCC	1 cut(s)	14
AxyI	CCTNAGG	1 cut(s)	63
BaeI	ACNNNNGTAYC	2 cut(s)	1102, 1135
BalI	TGGCCA	1 cut(s)	1484
BamHI	GGATCC	1 cut(s)	878
BanI	GGYRCC	2 cut(s)	58, 568
BanII	GRGCYC	1 cut(s)	38
BbsI	GAAGAC	2 cut(s)	796, 1336
Bbv12I	GWGCWC	1 cut(s)	38
BbvI	GCAGC	2 cut(s)	429, 1150
BccI	CCATC	5 cut(s)	25, 200, 463, 861, 1514
BceAI	ACGGC	1 cut(s)	617
BcgI	CGANNNNNNTGC	2 cut(s)	406, 440
BciT130I	CCWGG	1 cut(s)	12
BciVI	GTATCC	1 cut(s)	1130
BclI	TGATCA	1 cut(s)	508
BcnI	CCSGG	1 cut(s)	631
BcoDI	GTCTC	4 cut(s)	156, 661, 1331, 1538
BfaI	CTAG	4 cut(s)	185, 357, 651, 968
BfmI	CTRYAG	1 cut(s)	1177
BfuI	GTATCC	1 cut(s)	1130
BglII	AGATCT	1 cut(s)	302
BisI	GCNGC	2 cut(s)	418, 1164
BlsI	GCNGC	2 cut(s)	419, 1165
Bme1390I	CCNGG	2 cut(s)	12, 631
Bme18I	GGWCC	1 cut(s)	14
BmeT110I	CYCGRG	1 cut(s)	1148
BmgT120I	GGNCC	4 cut(s)	14, 633, 989, 1020
BmiI	GGNNCC	5 cut(s)	60, 270, 570, 634, 880
BmrFI	CCNGG	2 cut(s)	12, 631
BmrI	ACTGGG	2 cut(s)	912, 1427
BmsI	GCATC	3 cut(s)	254, 619, 883
BmuI	ACTGGG	2 cut(s)	912, 1427
BoxI	GACNNNNGTC	1 cut(s)	653
BpiI	GAAGAC	2 cut(s)	796, 1336
BpuEI	CTTGAG	1 cut(s)	783
BpuMI	CCSGG	1 cut(s)	631
Bsa29I	ATCGAT	1 cut(s)	562
BsaI	GGTCTC	1 cut(s)	1538
BsaJI	CCNNGG	1 cut(s)	630
BsaWI	WCCGGW	2 cut(s)	1089, 1223
BsaXI	ACNNNNNCTCC	4 cut(s)	661, 691, 1535, 1565
Bsc4I	CCNNNNNNNGG	7 cut(s)	53, 630, 903, 986, 1067, 1129, 1261
Bse118I	RCCGGY	2 cut(s)	1025, 1223
Bse1I	ACTGG	5 cut(s)	907, 988, 1426, 1433, 1485
Bse21I	CCTNAGG	1 cut(s)	63
Bse3DI	GCAATG	2 cut(s)	747, 1461
BseBI	CCWGG	1 cut(s)	12
BseCI	ATCGAT	1 cut(s)	562
BseDI	CCNNGG	1 cut(s)	630
BseGI	GGATG	8 cut(s)	73, 403, 436, 511, 610, 829, 872, 876
BseLI	CCNNNNNNNGG	7 cut(s)	53, 630, 903, 986, 1067, 1129, 1261
BseMI	GCAATG	2 cut(s)	747, 1461
BseMII	CTCAG	2 cut(s)	1060, 1155
BseNI	ACTGG	5 cut(s)	907, 988, 1426, 1433, 1485
BsePI	GCGCGC	1 cut(s)	975
BseX3I	CGGCCG	1 cut(s)	602
BseXI	GCAGC	2 cut(s)	429, 1150
BsgI	GTGCAG	1 cut(s)	1573
Bsh1236I	CGCG	1 cut(s)	977
Bsh1285I	CGRYCG	2 cut(s)	566, 605
BshFI	GGCC	6 cut(s)	604, 635, 991, 1022, 1029, 1484
BshNI	GGYRCC	2 cut(s)	58, 568
BshTI	ACCGGT	1 cut(s)	1223
BshVI	ATCGAT	1 cut(s)	562
BsiEI	CGRYCG	2 cut(s)	566, 605
BsiHKAI	GWGCWC	1 cut(s)	38
BsiHKCI	CYCGRG	1 cut(s)	1148
BsiSI	CCGG	5 cut(s)	630, 1026, 1090, 1224, 1407
BslFI	GGGAC	1 cut(s)	1414
BslI	CCNNNNNNNGG	7 cut(s)	53, 630, 903, 986, 1067, 1129, 1261
BsmAI	GTCTC	4 cut(s)	156, 661, 1331, 1538
BsmFI	GGGAC	1 cut(s)	1414
BsmI	GAATGC	3 cut(s)	22, 476, 977
BsnI	GGCC	6 cut(s)	604, 635, 991, 1022, 1029, 1484
Bso31I	GGTCTC	1 cut(s)	1538
BsoBI	CYCGRG	1 cut(s)	1148
Bsp1286I	GDGCHC	1 cut(s)	38
Bsp1407I	TGTACA	1 cut(s)	496
Bsp143I	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
BspACI	CCGC	1 cut(s)	1488
BspANI	GGCC	6 cut(s)	604, 635, 991, 1022, 1029, 1484
BspCNI	CTCAG	2 cut(s)	1059, 1154
BspDI	ATCGAT	1 cut(s)	562
BspFNI	CGCG	1 cut(s)	977
BspLI	GGNNCC	5 cut(s)	60, 270, 570, 634, 880
BspPI	GGATC	6 cut(s)	766, 821, 873, 886, 927, 1612
BspT107I	GGYRCC	2 cut(s)	58, 568
BspTNI	GGTCTC	1 cut(s)	1538
BsrDI	GCAATG	2 cut(s)	747, 1461
BsrFI	RCCGGY	2 cut(s)	1025, 1223
BsrGI	TGTACA	1 cut(s)	496
BsrI	ACTGG	5 cut(s)	907, 988, 1426, 1433, 1485
BssAI	RCCGGY	2 cut(s)	1025, 1223
BssECI	CCNNGG	1 cut(s)	630
BssHII	GCGCGC	1 cut(s)	975
BssMI	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
Bst2UI	CCWGG	1 cut(s)	12
Bst4CI	ACNGT	4 cut(s)	136, 145, 815, 1342
Bst6I	CTCTTC	1 cut(s)	380
BstAUI	TGTACA	1 cut(s)	496
BstC8I	GCNNGC	7 cut(s)	34, 190, 749, 977, 993, 1031, 1173
BstDEI	CTNAG	6 cut(s)	63, 258, 1046, 1141, 1217, 1304
BstF5I	GGATG	8 cut(s)	73, 403, 436, 511, 610, 829, 872, 876
BstFNI	CGCG	1 cut(s)	977
BstHHI	GCGC	3 cut(s)	441, 977, 979
BstKTI	GATC	8 cut(s)	305, 511, 566, 761, 829, 881, 935, 1607
BstMAI	GTCTC	4 cut(s)	156, 661, 1331, 1538
BstMBI	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
BstMCI	CGRYCG	2 cut(s)	566, 605
BstMWI	GCNNNNNNNGC	4 cut(s)	1172, 1386, 1403, 1655
BstNI	CCWGG	1 cut(s)	12
BstNSI	RCATGY	4 cut(s)	192, 688, 709, 751
BstPAI	GACNNNNGTC	1 cut(s)	653
BstSCI	CCNGG	2 cut(s)	10, 629
BstSFI	CTRYAG	1 cut(s)	1177
BstUI	CGCG	1 cut(s)	977
BstV1I	GCAGC	2 cut(s)	429, 1150
BstV2I	GAAGAC	2 cut(s)	796, 1336
BstX2I	RGATCY	3 cut(s)	302, 878, 932
BstYI	RGATCY	3 cut(s)	302, 878, 932
BstZI	CGGCCG	1 cut(s)	602
Bsu15I	ATCGAT	1 cut(s)	562
Bsu36I	CCTNAGG	1 cut(s)	63
BsuI	GTATCC	1 cut(s)	1130
BsuRI	GGCC	6 cut(s)	604, 635, 991, 1022, 1029, 1484
BsuTUI	ATCGAT	1 cut(s)	562
BtgZI	GCGATG	2 cut(s)	3, 1395
BtsCI	GGATG	8 cut(s)	73, 403, 436, 511, 610, 829, 872, 876
BtsI	GCAGTG	2 cut(s)	1106, 1561
BtsIMutI	CAGTG	7 cut(s)	489, 797, 900, 1106, 1389, 1478, 1561
Cac8I	GCNNGC	7 cut(s)	34, 190, 749, 977, 993, 1031, 1173
CfoI	GCGC	3 cut(s)	441, 977, 979
Cfr10I	RCCGGY	2 cut(s)	1025, 1223
Cfr13I	GGNCC	4 cut(s)	14, 633, 989, 1020
ClaI	ATCGAT	1 cut(s)	562
Csp6I	GTAC	5 cut(s)	286, 497, 1071, 1156, 1213
CspAI	ACCGGT	1 cut(s)	1223
CviQI	GTAC	5 cut(s)	286, 497, 1071, 1156, 1213
DdeI	CTNAG	6 cut(s)	63, 258, 1046, 1141, 1217, 1304
DpnI	GATC	8 cut(s)	304, 510, 565, 760, 828, 880, 934, 1606
DpnII	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
DraIII	CACNNNGTG	1 cut(s)	1677
DrdI	GACNNNNNNGTC	1 cut(s)	710
DseDI	GACNNNNNNGTC	1 cut(s)	710
EaeI	YGGCCR	2 cut(s)	602, 1482
EagI	CGGCCG	1 cut(s)	602
Eam1104I	CTCTTC	1 cut(s)	380
EarI	CTCTTC	1 cut(s)	380
Ecl136II	GAGCTC	1 cut(s)	36
EclXI	CGGCCG	1 cut(s)	602
Eco24I	GRGCYC	1 cut(s)	38
Eco31I	GGTCTC	1 cut(s)	1538
Eco47I	GGWCC	1 cut(s)	14
Eco52I	CGGCCG	1 cut(s)	602
Eco53kI	GAGCTC	1 cut(s)	36
Eco57I	CTGAAG	5 cut(s)	33, 909, 1099, 1413, 1422
Eco81I	CCTNAGG	1 cut(s)	63
Eco88I	CYCGRG	1 cut(s)	1148
EcoICRI	GAGCTC	1 cut(s)	36
EcoRI	GAATTC	2 cut(s)	368, 1620
EcoRII	CCWGG	1 cut(s)	10
EcoT22I	ATGCAT	1 cut(s)	784
EcoT38I	GRGCYC	1 cut(s)	38
FaqI	GGGAC	1 cut(s)	1414
FbaI	TGATCA	1 cut(s)	508
FblI	GTMKAC	2 cut(s)	84, 1631
Fnu4HI	GCNGC	2 cut(s)	418, 1164
FokI	GGATG	8 cut(s)	80, 410, 443, 498, 597, 836, 879, 883
FriOI	GRGCYC	1 cut(s)	38
Fsp4HI	GCNGC	2 cut(s)	418, 1164
FspBI	CTAG	4 cut(s)	185, 357, 651, 968
FspI	TGCGCA	1 cut(s)	440
GlaI	GCGC	3 cut(s)	440, 976, 978
GluI	GCNGC	2 cut(s)	418, 1164
HaeIII	GGCC	6 cut(s)	604, 635, 991, 1022, 1029, 1484
HapII	CCGG	5 cut(s)	630, 1026, 1090, 1224, 1407
HhaI	GCGC	3 cut(s)	441, 977, 979
Hin6I	GCGC	3 cut(s)	439, 975, 977
HinP1I	GCGC	3 cut(s)	439, 975, 977
HincII	GTYRAC	1 cut(s)	715
HindII	GTYRAC	1 cut(s)	715
HinfI	GANTC	3 cut(s)	559, 654, 1529
HpaII	CCGG	5 cut(s)	630, 1026, 1090, 1224, 1407
HphI	GGTGA	4 cut(s)	214, 313, 1180, 1408
Hpy166II	GTNNAC	6 cut(s)	44, 85, 139, 697, 715, 1632
Hpy188I	TCNGA	7 cut(s)	202, 460, 648, 836, 843, 1238, 1336
Hpy188III	TCNNGA	5 cut(s)	342, 591, 968, 1148, 1608
Hpy8I	GTNNAC	6 cut(s)	44, 85, 139, 697, 715, 1632
HpyAV	CCTTC	5 cut(s)	57, 235, 388, 853, 1379
HpyCH4III	ACNGT	4 cut(s)	136, 145, 815, 1342
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1172, 1386, 1403, 1655
HpyF3I	CTNAG	6 cut(s)	63, 258, 1046, 1141, 1217, 1304
HspAI	GCGC	3 cut(s)	439, 975, 977
Ksp22I	TGATCA	1 cut(s)	508
Kzo9I	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
LmnI	GCTCC	1 cut(s)	682
Lsp1109I	GCAGC	2 cut(s)	429, 1150
LweI	GCATC	3 cut(s)	254, 619, 883
MaeI	CTAG	4 cut(s)	185, 357, 651, 968
MaeIII	GTNAC	3 cut(s)	94, 809, 1351
MalI	GATC	8 cut(s)	304, 510, 565, 760, 828, 880, 934, 1606
MboI	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
MboII	GAAGA	6 cut(s)	397, 725, 796, 902, 1278, 1336
MflI	RGATCY	3 cut(s)	302, 878, 932
MhlI	GDGCHC	1 cut(s)	38
MlsI	TGGCCA	1 cut(s)	1484
MluCI	AATT	6 cut(s)	328, 345, 368, 1412, 1469, 1620
MluNI	TGGCCA	1 cut(s)	1484
MlyI	GAGTC	1 cut(s)	663
MmeI	TCCRAC	2 cut(s)	539, 908
MnlI	CCTC	9 cut(s)	37, 421, 807, 892, 908, 1097, 1342, 1455, 1635
Mox20I	TGGCCA	1 cut(s)	1484
Mph1103I	ATGCAT	1 cut(s)	784
MscI	TGGCCA	1 cut(s)	1484
MseI	TTAA	3 cut(s)	348, 1472, 1641
MslI	CAYNNNNRTG	1 cut(s)	1454
Msp20I	TGGCCA	1 cut(s)	1484
MspI	CCGG	5 cut(s)	630, 1026, 1090, 1224, 1407
MspR9I	CCNGG	2 cut(s)	12, 631
Mva1269I	GAATGC	3 cut(s)	22, 476, 977
MvaI	CCWGG	1 cut(s)	12
MvnI	CGCG	1 cut(s)	977
MwoI	GCNNNNNNNGC	4 cut(s)	1172, 1386, 1403, 1655
NciI	CCSGG	1 cut(s)	631
NdeII	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
NlaIV	GGNNCC	5 cut(s)	60, 270, 570, 634, 880
NmuCI	GTSAC	2 cut(s)	94, 809
NsbI	TGCGCA	1 cut(s)	440
NsiI	ATGCAT	1 cut(s)	784
NspI	RCATGY	4 cut(s)	192, 688, 709, 751
PaeI	GCATGC	2 cut(s)	192, 751
PaeR7I	CTCGAG	1 cut(s)	1148
PauI	GCGCGC	1 cut(s)	975
PciI	ACATGT	1 cut(s)	705
PctI	GAATGC	3 cut(s)	22, 476, 977
PfeI	GAWTC	2 cut(s)	559, 1529
PflMI	CCANNNNNTGG	1 cut(s)	1261
PinAI	ACCGGT	1 cut(s)	1223
PkrI	GCNGC	2 cut(s)	419, 1165
Ple19I	CGATCG	1 cut(s)	566
PleI	GAGTC	1 cut(s)	662
PpsI	GAGTC	1 cut(s)	662
PscI	ACATGT	1 cut(s)	705
PshAI	GACNNNNGTC	1 cut(s)	653
PshBI	ATTAAT	1 cut(s)	348
Psp124BI	GAGCTC	1 cut(s)	38
Psp6I	CCWGG	1 cut(s)	10
PspGI	CCWGG	1 cut(s)	10
PspN4I	GGNNCC	5 cut(s)	60, 270, 570, 634, 880
PspPI	GGNCC	4 cut(s)	14, 633, 989, 1020
PsrI	GAACNNNNNNTAC	2 cut(s)	129, 161
PsuI	RGATCY	3 cut(s)	302, 878, 932
PteI	GCGCGC	1 cut(s)	975
PvuI	CGATCG	1 cut(s)	566
RsaI	GTAC	5 cut(s)	287, 498, 1072, 1157, 1214
RsaNI	GTAC	5 cut(s)	286, 497, 1071, 1156, 1213
RseI	CAYNNNNRTG	1 cut(s)	1454
SacI	GAGCTC	1 cut(s)	38
SaqAI	TTAA	3 cut(s)	348, 1472, 1641
SatI	GCNGC	2 cut(s)	418, 1164
Sau3AI	GATC	8 cut(s)	302, 508, 563, 758, 826, 878, 932, 1604
Sau96I	GGNCC	4 cut(s)	14, 633, 989, 1020
SchI	GAGTC	1 cut(s)	663
ScrFI	CCNGG	2 cut(s)	12, 631
SduI	GDGCHC	1 cut(s)	38
SfaNI	GCATC	3 cut(s)	254, 619, 883
SfcI	CTRYAG	1 cut(s)	1177
Sfr274I	CTCGAG	1 cut(s)	1148
SinI	GGWCC	1 cut(s)	14
SlaI	CTCGAG	1 cut(s)	1148
SmiMI	CAYNNNNRTG	1 cut(s)	1454
SmlI	CTYRAG	2 cut(s)	798, 1148
SmoI	CTYRAG	2 cut(s)	798, 1148
SphI	GCATGC	2 cut(s)	192, 751
Sse9I	AATT	6 cut(s)	328, 345, 368, 1412, 1469, 1620
SsiI	CCGC	1 cut(s)	1488
SspI	AATATT	1 cut(s)	1685
SspMI	CTAG	4 cut(s)	185, 357, 651, 968
SstI	GAGCTC	1 cut(s)	38
StyD4I	CCNGG	2 cut(s)	10, 629
TaaI	ACNGT	4 cut(s)	136, 145, 815, 1342
TaqI	TCGA	4 cut(s)	426, 562, 1149, 1347
TasI	AATT	6 cut(s)	328, 345, 368, 1412, 1469, 1620
TatI	WGTACW	3 cut(s)	285, 496, 1155
TfiI	GAWTC	2 cut(s)	559, 1529
Tru1I	TTAA	3 cut(s)	348, 1472, 1641
Tru9I	TTAA	3 cut(s)	348, 1472, 1641
TscAI	CASTG	7 cut(s)	489, 797, 907, 1106, 1396, 1485, 1561
TseFI	GTSAC	2 cut(s)	94, 809
TseI	GCWGC	2 cut(s)	417, 1163
Tsp45I	GTSAC	2 cut(s)	94, 809
TspDTI	ATGAA	8 cut(s)	393, 653, 725, 783, 789, 1116, 1398, 1429
TspRI	CASTG	7 cut(s)	489, 797, 907, 1106, 1396, 1485, 1561
Van91I	CCANNNNNTGG	1 cut(s)	1261
VpaK11BI	GGWCC	1 cut(s)	14
VspI	ATTAAT	1 cut(s)	348
XapI	RAATTY	3 cut(s)	368, 1412, 1620
XbaI	TCTAGA	1 cut(s)	967
XceI	RCATGY	4 cut(s)	192, 688, 709, 751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1492
XhoI	CTCGAG	1 cut(s)	1148
XmiI	GTMKAC	2 cut(s)	84, 1631
XspI	CTAG	4 cut(s)	185, 357, 651, 968
Zsp2I	ATGCAT	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.