Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

72042255 .. 72047587

Gene Structure 5333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021110

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGAGTTTATAATCCTCTTCCTCCTTCTTTCACTCCTTGTTTATCGTCTCCTCTCTTTCAACAACCATGGTTTATCCTGGTCCATCGCATTCCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATCAGCAACAAATGGATTCTTGTTGACCATAAACCATACCCCGATCGCCTCTTGCACCGGGTGCCTAAGGATGAGCTTCCAGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCGTAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTCTCTGATGATGGGTGTTCCTCTATCACCTTCTACTCACTTGTGGAAGCATCAAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGAGCTCCCTTTAGATACTTCACCAATAATTCCACGCTTTCTGGAATTAATAATAATAGCTCAATGGAATTCAAGCATGAATGGAAGAGAGTGAAGGATAAGTATGCGCAACTTAGCAGCAAAATCGAGGATGCGATGCGCAAATCTATCAATTCGTCTGATATTATCGAATTCAACTTTTCAGTGTTCTCAAATGTACAGCGTAATGATCATCCAACAATAATCAAGGTTGTACTGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCACATTTAATTTATATATCCAGAGAAAAACGGCCGAAGCATCCACATCATGCCAAAGCCGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACCAATGCTCCATACATGCTAAATGTGGACTGCGACATGTTTGTCAACAACCCGAACATTATTCTTCATGCAATGTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTCTTCTGTGACGGTCTAAAGGATGATCCTTTCGGAAATCAGATGATAGTTTGGTGGAAGTATGTGGGACAAGGAGTTGCAGGAATTCAGGGACCTTTTTATTCCGGATCAGGATGTGTTCATACACGAAAAGTCATCTATGGTCTATTCCCCAATTACGTGAAAGTTGGAGAAACAAATGCAAAAAACTTGATGAACGGTAAATCAGCCAATGAAGAGTTACTTGATGTATTTGGGAAGGAATTTACCAAATCAGCTGCTGATGCTTTAAACGGGAAGGCAGTGTGCCCAGACATGCTTACAGAAACTATTGAGGCTGCATACCGAGTTGCTGGTGCTGGATATGAGTATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCGTCAACTGAAGATGCCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTGTTTATGCACCAGACCCACCAGCCTTTCTAGAATGCGCGCCTACTGGTGGGCCTGCTGTAATGACCCAACAGAAAAGGTGGGCCACCGGCCTGCTTGAAATCCTCCTCAATAAAAACTGCCCTATATTTGGTACTCTCTTTGCAAACCTCCGGTTCAGGCAGTGCTTGGGCTACTTCAGTATCCTTTCATGGGGGATAAGCTCAGTTCTCGAGCTATACTACGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCCAAGGGCCAAGAACCCGCTTACTATTTACTCCTAGCTGTGTTTCTGATCTACGCTATGTACACTTCATCGGAGTACCTTAGAACCGGTCAATCAATCCGAGCATGGTGGAATAACCAAAGAATGGGAAGAATAATCTCAATGAGTGCATGGCTTTTTGGATTTCTTAGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTTGAGGTAACACGAAAAGACCAATCTACATCAAGCGATGAAGGCACTGAAGATACTGAAGCCGAAAAATTCACCTTTGACCAGTCCCCAGTTTTCATACCTCCCACAGCAATGTTGTTTCTACAATTAACAGCACTGGCCACCGCTTTGTTGGGGCTTCAACCACCAGCCCGTGATGGGGTGGAATCAGGCTCTTTGGAGACCATGTGTAGTGTTTTGTTGGTGGTATGCTTATTACCATTTTTGAAAGGTCTGTTTGGATCAGGAAAATATGGAATTCCTTTGTCTACCATATTTAAGTCTGTTGGTCTTGCACTACTTTTCTACACCTTGTGCAGATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

735

Amino Acids

82.33

Weight (kDa)

7.79

Isoelectric Point (pI)

35.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	73 - 368	3.1e-86	Cellulose synthase
Cellulose_synt	PF03552	389 - 725	1e-50	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	11
AasI	GACNNNNNNGTC	1 cut(s)	845
Acc16I	TGCGCA	2 cut(s)	543, 575
AccB1I	GGYRCC	1 cut(s)	193
AccB7I	CCANNNNNTGG	1 cut(s)	1777
AccI	GTMKAC	2 cut(s)	219, 2147
AccII	CGCG	1 cut(s)	1424
AccIII	TCCGGA	1 cut(s)	1040
AciI	CCGC	2 cut(s)	1671, 2004
AclWI	GGATC	6 cut(s)	901, 956, 1051, 1333, 1374, 2128
AcoI	YGGCCR	2 cut(s)	737, 1998
AcsI	RAATTY	6 cut(s)	503, 605, 1020, 1178, 1928, 2136
AcuI	CTGAAG	5 cut(s)	100, 1356, 1546, 1929, 1938
AdeI	CACNNNGTG	2 cut(s)	193, 2193
AfaI	GTAC	6 cut(s)	422, 633, 669, 1519, 1715, 1730
AfiI	CCNNNNNNNGG	9 cut(s)	120, 765, 1350, 1433, 1514, 1576, 1777, 2037, 2038
AflIII	ACRYGT	1 cut(s)	840
AgeI	ACCGGT	1 cut(s)	1739
AgsI	TTSAA	9 cut(s)	61, 254, 431, 508, 610, 1359, 1484, 2021, 2107
AjnI	CCWGG	1 cut(s)	77
AjuI	GAANNNNNNNTTGG	2 cut(s)	1631, 1663
AluBI	AGCT	9 cut(s)	103, 208, 250, 440, 495, 1193, 1587, 1600, 1691
AluI	AGCT	9 cut(s)	103, 208, 250, 440, 495, 1193, 1587, 1600, 1691
Alw21I	GWGCWC	2 cut(s)	105, 442
Alw26I	GTCTC	6 cut(s)	53, 291, 337, 796, 1847, 2054
AlwI	GGATC	6 cut(s)	901, 956, 1051, 1333, 1374, 2128
AlwNI	CAGNNNCTG	1 cut(s)	1196
Ama87I	CYCGRG	1 cut(s)	1595
Aor13HI	TCCGGA	1 cut(s)	1040
AoxI	GGCC	7 cut(s)	737, 768, 1436, 1467, 1474, 1660, 1998
ApeKI	GCWGC	4 cut(s)	552, 1193, 1253, 1610
ApoI	RAATTY	6 cut(s)	503, 605, 1020, 1178, 1928, 2136
AseI	ATTAAT	1 cut(s)	483
AsiGI	ACCGGT	1 cut(s)	1739
AspLEI	GCGC	4 cut(s)	544, 576, 1424, 1426
AspS9I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
AsuC2I	CCSGG	2 cut(s)	191, 766
AsuHPI	GGTGA	5 cut(s)	121, 349, 448, 1627, 1924
AsuII	TTCGAA	1 cut(s)	692
AvaI	CYCGRG	1 cut(s)	1595
AvaII	GGWCC	2 cut(s)	81, 1028
AxyI	CCTNAGG	1 cut(s)	198
BaeGI	GKGCMC	1 cut(s)	1226
BaeI	ACNNNNGTAYC	2 cut(s)	1549, 1582
BalI	TGGCCA	1 cut(s)	2000
BanI	GGYRCC	1 cut(s)	193
BanII	GRGCYC	2 cut(s)	105, 442
BbsI	GAAGAC	1 cut(s)	931
Bbv12I	GWGCWC	2 cut(s)	105, 442
BbvI	GCAGC	4 cut(s)	564, 1180, 1240, 1597
BccI	CCATC	5 cut(s)	92, 140, 335, 1308, 2030
BceAI	ACGGC	1 cut(s)	752
BcgI	CGANNNNNNTGC	2 cut(s)	541, 575
BciT130I	CCWGG	1 cut(s)	79
BciVI	GTATCC	1 cut(s)	1577
BclI	TGATCA	1 cut(s)	643
BcnI	CCSGG	2 cut(s)	191, 766
BcoDI	GTCTC	6 cut(s)	53, 291, 337, 796, 1847, 2054
BfaI	CTAG	4 cut(s)	320, 786, 1415, 1688
BfmI	CTRYAG	1 cut(s)	1624
BfuI	GTATCC	1 cut(s)	1577
BisI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
BlsI	GCNGC	4 cut(s)	554, 1195, 1255, 1612
Bme1390I	CCNGG	3 cut(s)	79, 191, 766
Bme18I	GGWCC	2 cut(s)	81, 1028
BmeT110I	CYCGRG	1 cut(s)	1595
BmgT120I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
BmiI	GGNNCC	4 cut(s)	195, 405, 769, 1029
BmrFI	CCNGG	3 cut(s)	79, 191, 766
BmrI	ACTGGG	2 cut(s)	1359, 1943
BmsI	GCATC	6 cut(s)	389, 556, 561, 754, 1189, 1330
BmuI	ACTGGG	2 cut(s)	1359, 1943
BoxI	GACNNNNGTC	1 cut(s)	788
BpiI	GAAGAC	1 cut(s)	931
BpmI	CTGGAG	1 cut(s)	692
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	1 cut(s)	918
BpuMI	CCSGG	2 cut(s)	191, 766
Bsa29I	ATCGAT	1 cut(s)	697
BsaAI	YACGTR	1 cut(s)	1096
BsaI	GGTCTC	1 cut(s)	2054
BsaJI	CCNNGG	3 cut(s)	67, 765, 1656
BsaWI	WCCGGW	3 cut(s)	1040, 1536, 1739
BsaXI	ACNNNNNCTCC	4 cut(s)	796, 826, 2051, 2081
Bsc4I	CCNNNNNNNGG	9 cut(s)	120, 765, 1350, 1433, 1514, 1576, 1777, 2037, 2038
Bse118I	RCCGGY	2 cut(s)	1472, 1739
Bse1I	ACTGG	6 cut(s)	675, 1354, 1435, 1942, 1949, 2001
Bse21I	CCTNAGG	1 cut(s)	198
Bse3DI	GCAATG	2 cut(s)	882, 1977
BseAI	TCCGGA	1 cut(s)	1040
BseBI	CCWGG	1 cut(s)	79
BseCI	ATCGAT	1 cut(s)	697
BseDI	CCNNGG	3 cut(s)	67, 765, 1656
BseGI	GGATG	8 cut(s)	208, 571, 646, 745, 964, 1055, 1319, 1323
BseLI	CCNNNNNNNGG	9 cut(s)	120, 765, 1350, 1433, 1514, 1576, 1777, 2037, 2038
BseMI	GCAATG	2 cut(s)	882, 1977
BseMII	CTCAG	1 cut(s)	1602
BseNI	ACTGG	6 cut(s)	675, 1354, 1435, 1942, 1949, 2001
BsePI	GCGCGC	1 cut(s)	1422
BseRI	GAGGAG	2 cut(s)	41, 1481
BseSI	GKGCMC	1 cut(s)	1226
BseX3I	CGGCCG	1 cut(s)	737
BseXI	GCAGC	4 cut(s)	564, 1180, 1240, 1597
Bsh1236I	CGCG	1 cut(s)	1424
Bsh1285I	CGRYCG	2 cut(s)	178, 740
BshFI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
BshNI	GGYRCC	1 cut(s)	193
BshTI	ACCGGT	1 cut(s)	1739
BshVI	ATCGAT	1 cut(s)	697
BsiEI	CGRYCG	2 cut(s)	178, 740
BsiHKAI	GWGCWC	2 cut(s)	105, 442
BsiHKCI	CYCGRG	1 cut(s)	1595
BsiSI	CCGG	6 cut(s)	190, 765, 1041, 1473, 1537, 1740
BslFI	GGGAC	3 cut(s)	1017, 1041, 1930
BslI	CCNNNNNNNGG	9 cut(s)	120, 765, 1350, 1433, 1514, 1576, 1777, 2037, 2038
BsmAI	GTCTC	6 cut(s)	53, 291, 337, 796, 1847, 2054
BsmBI	CGTCTC	1 cut(s)	53
BsmFI	GGGAC	3 cut(s)	1017, 1041, 1930
BsmI	GAATGC	2 cut(s)	89, 1424
BsnI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
Bso31I	GGTCTC	1 cut(s)	2054
BsoBI	CYCGRG	1 cut(s)	1595
Bsp119I	TTCGAA	1 cut(s)	692
Bsp1286I	GDGCHC	3 cut(s)	105, 442, 1226
Bsp13I	TCCGGA	1 cut(s)	1040
Bsp1407I	TGTACA	2 cut(s)	631, 1713
Bsp19I	CCATGG	1 cut(s)	67
BspACI	CCGC	2 cut(s)	1671, 2004
BspANI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
BspCNI	CTCAG	1 cut(s)	1601
BspDI	ATCGAT	1 cut(s)	697
BspEI	TCCGGA	1 cut(s)	1040
BspFNI	CGCG	1 cut(s)	1424
BspLI	GGNNCC	4 cut(s)	195, 405, 769, 1029
BspPI	GGATC	6 cut(s)	901, 956, 1051, 1333, 1374, 2128
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	193
BspTNI	GGTCTC	1 cut(s)	2054
BsrDI	GCAATG	2 cut(s)	882, 1977
BsrFI	RCCGGY	2 cut(s)	1472, 1739
BsrGI	TGTACA	2 cut(s)	631, 1713
BsrI	ACTGG	6 cut(s)	675, 1354, 1435, 1942, 1949, 2001
BssAI	RCCGGY	2 cut(s)	1472, 1739
BssECI	CCNNGG	3 cut(s)	67, 765, 1656
BssHII	GCGCGC	1 cut(s)	1422
BssT1I	CCWWGG	2 cut(s)	67, 1656
Bst2UI	CCWGG	1 cut(s)	79
Bst4CI	ACNGT	5 cut(s)	271, 280, 950, 1136, 1858
Bst6I	CTCTTC	3 cut(s)	23, 515, 1146
BstAPI	GCANNNNNTGC	1 cut(s)	193
BstAUI	TGTACA	2 cut(s)	631, 1713
BstBAI	YACGTR	1 cut(s)	1096
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	6 cut(s)	101, 325, 1424, 1440, 1478, 1620
BstDEI	CTNAG	6 cut(s)	198, 393, 548, 1588, 1733, 1820
BstDSI	CCRYGG	1 cut(s)	67
BstF5I	GGATG	8 cut(s)	208, 571, 646, 745, 964, 1055, 1319, 1323
BstFNI	CGCG	1 cut(s)	1424
BstHHI	GCGC	4 cut(s)	544, 576, 1424, 1426
BstMAI	GTCTC	6 cut(s)	53, 291, 337, 796, 1847, 2054
BstMCI	CGRYCG	2 cut(s)	178, 740
BstMWI	GCNNNNNNNGC	4 cut(s)	193, 1199, 1619, 1902
BstNI	CCWGG	1 cut(s)	79
BstNSI	RCATGY	4 cut(s)	327, 823, 844, 1234
BstPAI	GACNNNNGTC	1 cut(s)	788
BstSCI	CCNGG	3 cut(s)	77, 189, 764
BstSFI	CTRYAG	1 cut(s)	1624
BstSLI	GKGCMC	1 cut(s)	1226
BstUI	CGCG	1 cut(s)	1424
BstV1I	GCAGC	4 cut(s)	564, 1180, 1240, 1597
BstV2I	GAAGAC	1 cut(s)	931
BstX2I	RGATCY	1 cut(s)	1379
BstYI	RGATCY	1 cut(s)	1379
BstZI	CGGCCG	1 cut(s)	737
Bsu15I	ATCGAT	1 cut(s)	697
Bsu36I	CCTNAGG	1 cut(s)	198
BsuI	GTATCC	1 cut(s)	1577
BsuRI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
BsuTUI	ATCGAT	1 cut(s)	697
BtgI	CCRYGG	1 cut(s)	67
BtgZI	GCGATG	3 cut(s)	70, 584, 1911
BtsCI	GGATG	8 cut(s)	208, 571, 646, 745, 964, 1055, 1319, 1323
BtsI	GCAGTG	2 cut(s)	1224, 1553
BtsIMutI	CAGTG	8 cut(s)	624, 708, 932, 1224, 1347, 1553, 1905, 1994
Cac8I	GCNNGC	6 cut(s)	101, 325, 1424, 1440, 1478, 1620
CaiI	CAGNNNCTG	1 cut(s)	1196
CfoI	GCGC	4 cut(s)	544, 576, 1424, 1426
Cfr10I	RCCGGY	2 cut(s)	1472, 1739
Cfr13I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
ClaI	ATCGAT	1 cut(s)	697
Csp6I	GTAC	6 cut(s)	421, 632, 668, 1518, 1714, 1729
CspAI	ACCGGT	1 cut(s)	1739
CviQI	GTAC	6 cut(s)	421, 632, 668, 1518, 1714, 1729
DdeI	CTNAG	6 cut(s)	198, 393, 548, 1588, 1733, 1820
DraI	TTTAAA	1 cut(s)	1206
DraIII	CACNNNGTG	2 cut(s)	193, 2193
DrdI	GACNNNNNNGTC	1 cut(s)	845
DseDI	GACNNNNNNGTC	1 cut(s)	845
EaeI	YGGCCR	2 cut(s)	737, 1998
EagI	CGGCCG	1 cut(s)	737
Eam1104I	CTCTTC	3 cut(s)	23, 515, 1146
EarI	CTCTTC	3 cut(s)	23, 515, 1146
Ecl136II	GAGCTC	2 cut(s)	103, 440
EclXI	CGGCCG	1 cut(s)	737
Eco130I	CCWWGG	2 cut(s)	67, 1656
Eco24I	GRGCYC	2 cut(s)	105, 442
Eco31I	GGTCTC	1 cut(s)	2054
Eco47I	GGWCC	2 cut(s)	81, 1028
Eco52I	CGGCCG	1 cut(s)	737
Eco53kI	GAGCTC	2 cut(s)	103, 440
Eco57I	CTGAAG	5 cut(s)	100, 1356, 1546, 1929, 1938
Eco81I	CCTNAGG	1 cut(s)	198
Eco88I	CYCGRG	1 cut(s)	1595
EcoICRI	GAGCTC	2 cut(s)	103, 440
EcoO109I	RGGNCCY	1 cut(s)	1028
EcoRI	GAATTC	4 cut(s)	503, 605, 1020, 2136
EcoRII	CCWGG	1 cut(s)	77
EcoT14I	CCWWGG	2 cut(s)	67, 1656
EcoT22I	ATGCAT	1 cut(s)	919
EcoT38I	GRGCYC	2 cut(s)	105, 442
ErhI	CCWWGG	2 cut(s)	67, 1656
Esp3I	CGTCTC	1 cut(s)	53
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	3 cut(s)	1017, 1041, 1930
FauI	CCCGC	1 cut(s)	1678
FbaI	TGATCA	1 cut(s)	643
FblI	GTMKAC	2 cut(s)	219, 2147
Fnu4HI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
FokI	GGATG	8 cut(s)	215, 578, 633, 732, 971, 1062, 1326, 1330
FriOI	GRGCYC	2 cut(s)	105, 442
Fsp4HI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
FspBI	CTAG	4 cut(s)	320, 786, 1415, 1688
FspI	TGCGCA	2 cut(s)	543, 575
GlaI	GCGC	4 cut(s)	543, 575, 1423, 1425
GluI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
GsuI	CTGGAG	1 cut(s)	692
HaeIII	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
HapII	CCGG	6 cut(s)	190, 765, 1041, 1473, 1537, 1740
HhaI	GCGC	4 cut(s)	544, 576, 1424, 1426
Hin6I	GCGC	4 cut(s)	542, 574, 1422, 1424
HinP1I	GCGC	4 cut(s)	542, 574, 1422, 1424
HincII	GTYRAC	3 cut(s)	157, 850, 1332
HindII	GTYRAC	3 cut(s)	157, 850, 1332
HinfI	GANTC	4 cut(s)	148, 694, 789, 2045
HpaII	CCGG	6 cut(s)	190, 765, 1041, 1473, 1537, 1740
HphI	GGTGA	5 cut(s)	121, 349, 448, 1627, 1924
Hpy166II	GTNNAC	9 cut(s)	111, 157, 220, 274, 832, 850, 1332, 1716, 2148
Hpy188I	TCNGA	9 cut(s)	337, 595, 783, 971, 978, 1701, 1726, 1754, 1852
Hpy188III	TCNNGA	7 cut(s)	477, 726, 1041, 1047, 1415, 1595, 2124
Hpy8I	GTNNAC	9 cut(s)	111, 157, 220, 274, 832, 850, 1332, 1716, 2148
HpyAV	CCTTC	7 cut(s)	35, 124, 370, 523, 1168, 1207, 1895
HpyCH4III	ACNGT	5 cut(s)	271, 280, 950, 1136, 1858
HpyCH4IV	ACGT	1 cut(s)	1095
HpyF10VI	GCNNNNNNNGC	4 cut(s)	193, 1199, 1619, 1902
HpyF3I	CTNAG	6 cut(s)	198, 393, 548, 1588, 1733, 1820
HpySE526I	ACGT	1 cut(s)	1095
HspAI	GCGC	4 cut(s)	542, 574, 1422, 1424
Kpn2I	TCCGGA	1 cut(s)	1040
Ksp22I	TGATCA	1 cut(s)	643
LmnI	GCTCC	2 cut(s)	445, 817
Lsp1109I	GCAGC	4 cut(s)	564, 1180, 1240, 1597
LweI	GCATC	6 cut(s)	389, 556, 561, 754, 1189, 1330
MaeI	CTAG	4 cut(s)	320, 786, 1415, 1688
MaeII	ACGT	1 cut(s)	1095
MaeIII	GTNAC	4 cut(s)	229, 944, 1155, 1867
MboII	GAAGA	8 cut(s)	10, 532, 860, 931, 1163, 1349, 1794, 1922
MflI	RGATCY	1 cut(s)	1379
MhlI	GDGCHC	3 cut(s)	105, 442, 1226
MlsI	TGGCCA	1 cut(s)	2000
MluNI	TGGCCA	1 cut(s)	2000
MlyI	GAGTC	1 cut(s)	798
MmeI	TCCRAC	3 cut(s)	674, 1084, 1355
Mox20I	TGGCCA	1 cut(s)	2000
Mph1103I	ATGCAT	1 cut(s)	919
MroI	TCCGGA	1 cut(s)	1040
MscI	TGGCCA	1 cut(s)	2000
MseI	TTAA	5 cut(s)	483, 713, 1205, 1988, 2157
MslI	CAYNNNNRTG	1 cut(s)	1970
Msp20I	TGGCCA	1 cut(s)	2000
MspA1I	CMGCKG	1 cut(s)	1193
MspI	CCGG	6 cut(s)	190, 765, 1041, 1473, 1537, 1740
MspR9I	CCNGG	3 cut(s)	79, 191, 766
Mva1269I	GAATGC	2 cut(s)	89, 1424
MvaI	CCWGG	1 cut(s)	79
MvnI	CGCG	1 cut(s)	1424
MwoI	GCNNNNNNNGC	4 cut(s)	193, 1199, 1619, 1902
NciI	CCSGG	2 cut(s)	191, 766
NcoI	CCATGG	1 cut(s)	67
NlaIV	GGNNCC	4 cut(s)	195, 405, 769, 1029
NmuCI	GTSAC	2 cut(s)	229, 944
NsbI	TGCGCA	2 cut(s)	543, 575
NsiI	ATGCAT	1 cut(s)	919
NspI	RCATGY	4 cut(s)	327, 823, 844, 1234
NspV	TTCGAA	1 cut(s)	692
PaeI	GCATGC	1 cut(s)	327
PaeR7I	CTCGAG	1 cut(s)	1595
PauI	GCGCGC	1 cut(s)	1422
PciI	ACATGT	1 cut(s)	840
PctI	GAATGC	2 cut(s)	89, 1424
PfeI	GAWTC	3 cut(s)	148, 694, 2045
PflMI	CCANNNNNTGG	1 cut(s)	1777
PinAI	ACCGGT	1 cut(s)	1739
PkrI	GCNGC	4 cut(s)	554, 1195, 1255, 1612
Ple19I	CGATCG	1 cut(s)	178
PleI	GAGTC	1 cut(s)	797
PpsI	GAGTC	1 cut(s)	797
Ppu21I	YACGTR	1 cut(s)	1096
PpuMI	RGGWCCY	1 cut(s)	1028
PscI	ACATGT	1 cut(s)	840
PshAI	GACNNNNGTC	1 cut(s)	788
PshBI	ATTAAT	1 cut(s)	483
PsiI	TTATAA	1 cut(s)	11
Psp124BI	GAGCTC	2 cut(s)	105, 442
Psp5II	RGGWCCY	1 cut(s)	1028
Psp6I	CCWGG	1 cut(s)	77
PspGI	CCWGG	1 cut(s)	77
PspN4I	GGNNCC	4 cut(s)	195, 405, 769, 1029
PspPI	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
PspPPI	RGGWCCY	1 cut(s)	1028
PsrI	GAACNNNNNNTAC	2 cut(s)	264, 296
PstNI	CAGNNNCTG	1 cut(s)	1196
PsuI	RGATCY	1 cut(s)	1379
PteI	GCGCGC	1 cut(s)	1422
PvuI	CGATCG	1 cut(s)	178
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	6 cut(s)	422, 633, 669, 1519, 1715, 1730
RsaNI	GTAC	6 cut(s)	421, 632, 668, 1518, 1714, 1729
RseI	CAYNNNNRTG	1 cut(s)	1970
SacI	GAGCTC	2 cut(s)	105, 442
SaqAI	TTAA	5 cut(s)	483, 713, 1205, 1988, 2157
SatI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
Sau96I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
SchI	GAGTC	1 cut(s)	798
ScrFI	CCNGG	3 cut(s)	79, 191, 766
SduI	GDGCHC	3 cut(s)	105, 442, 1226
SfaNI	GCATC	6 cut(s)	389, 556, 561, 754, 1189, 1330
SfcI	CTRYAG	1 cut(s)	1624
Sfr274I	CTCGAG	1 cut(s)	1595
SfuI	TTCGAA	1 cut(s)	692
SinI	GGWCC	2 cut(s)	81, 1028
SlaI	CTCGAG	1 cut(s)	1595
SmiMI	CAYNNNNRTG	1 cut(s)	1970
SmlI	CTYRAG	2 cut(s)	933, 1595
SmoI	CTYRAG	2 cut(s)	933, 1595
SphI	GCATGC	1 cut(s)	327
SsiI	CCGC	2 cut(s)	1671, 2004
SspMI	CTAG	4 cut(s)	320, 786, 1415, 1688
SstI	GAGCTC	2 cut(s)	105, 442
StyD4I	CCNGG	3 cut(s)	77, 189, 764
StyI	CCWWGG	2 cut(s)	67, 1656
TaaI	ACNGT	5 cut(s)	271, 280, 950, 1136, 1858
TaiI	ACGT	1 cut(s)	1098
TaqI	TCGA	5 cut(s)	561, 603, 692, 697, 1596
TatI	WGTACW	4 cut(s)	420, 631, 667, 1713
TfiI	GAWTC	3 cut(s)	148, 694, 2045
Tru1I	TTAA	5 cut(s)	483, 713, 1205, 1988, 2157
Tru9I	TTAA	5 cut(s)	483, 713, 1205, 1988, 2157
TscAI	CASTG	8 cut(s)	624, 708, 932, 1224, 1354, 1553, 1912, 2001
TseFI	GTSAC	2 cut(s)	229, 944
TseI	GCWGC	4 cut(s)	552, 1193, 1253, 1610
Tsp45I	GTSAC	2 cut(s)	229, 944
TspRI	CASTG	8 cut(s)	624, 708, 932, 1224, 1354, 1553, 1912, 2001
Van91I	CCANNNNNTGG	1 cut(s)	1777
VpaK11BI	GGWCC	2 cut(s)	81, 1028
VspI	ATTAAT	1 cut(s)	483
XapI	RAATTY	6 cut(s)	503, 605, 1020, 1178, 1928, 2136
XbaI	TCTAGA	1 cut(s)	1414
XceI	RCATGY	4 cut(s)	327, 823, 844, 1234
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2008
XhoI	CTCGAG	1 cut(s)	1595
XmiI	GTMKAC	2 cut(s)	219, 2147
XspI	CTAG	4 cut(s)	320, 786, 1415, 1688
Zsp2I	ATGCAT	1 cut(s)	919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.