Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000454

Physical Location & Seq

Genomic Coordinates Reverse (-)

78964970 .. 78969687

Gene Structure 4718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG560500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGAGTTTATAATCCTCTTCCTCCTTCTTTCACTCCTTGTTTATCGTCTCCTCTCTTTCAACAACCATGGTTTATCCTGGTCCATCGCATTCCTCTGCGAGCTCTGGTTTACCTTCAGTTGGGTCATCACCATGAGCAACAAATGGATCCTTGTTGACCATAAACCATACCCCGACCGCCTATTGCAACTGGTGCCTAAGGATGAGCTTCCTGCAGTAGACTTGTTTGTGACCACAGCAGACCCAGAGCTTGAACCACCTATCATTACCGTAAACACCGTTCTGTCTCTGTTGGCAGTTGATTACCCAACAGACAAACTAGCATGCTATGTTTCTGATGATGGGTGTTCCCCTATCACCTTCTACTCACTTGTGGAAGCATCAAAGTTTGCTAAGATTTGGGTTCCCTTTTGCAAAAAGTACAATGTTCAAGTTAGATCTCCCTTTAGATACTTCACAAATAATTCCACGCTTTCTGGAATTAATAATACTAGCTCAATGGAATTCAAGCATGAATGGAAGAGAGTGAAGGATGAGTATGAGCAACTTAGCAGCAAAATCGAGGATGTGGTGCGCAAATCTATCAATCCGTCTGATATTATTGAATGCGACTTTTCAGTGTTCTCAAATGTACAGCGTAATGATCATCCAACAATAATCAAGGTTGTATTGGAGAACAAAGAAGCACATTCGAATCGATCAGTGCCACATTTAGTTTATATATCCAGAGAAAAACGGCCGAAGCATCCACATCATGCCAAAGCCGGGGCCATGAATGTTCTGACTAGAGTCTCTGGGTTGATGACCAATGCTCCATACATGCTAAATGTGGACTGCGACATGTTTGTCAACAGCCCGAACATTATTCTTCATGCAATTTGTATGCTACTTGGATCAAAGAATGAAAATGAAAATGCATTTGTTCAGTGTCCTCAAGTCTTCTGTGACGGTCTAAAGGATGATCCTTTCGGAAATCAGATGATAGTTTGGTGGAAGTATGTGGGACAAGGAGTTTCAGGAATTCAGGGACCTTTTTATTCCGGATCAGGATGTGTTCATACACGAAAAGTTATCTATGGTCTATCCCCCAATTACGTGAAAGTTGAAGAAACAAATGCGAAAAACTTGATGAACGGTAAATCAGCCGATGAAGAGTTACTTGATGTATTTGGGAAGGAATTTACCAAATCAGCTGCTGATGCTTTAAACGGGAAGGCAGTGTGCCCAGACACGCTTACAGAAACTATTGAGGCTGCATACCAAGTTGCTGGTGCTGGATATGAGTATGGCACACAATGGGGCAAAAAGGTGGGATGGATGTATGGATCCTCAACTGAAGATGCCCTCACTGGGCTTTCAATCCATAACAAAGGTTGGAGATCCATTGTTTATGCACCAGACCCACCAGCCTTTCTGGAATGCGCGCCTACTGGTGGGCCTGCTGTAATGACCCAACAGAAAAGGTGGGCCACCGGCCTGCTTGAAATCCTACTCAGTAAAAACTGCCCCATATTTGGTACTCTCTTTGCAAACCTCCGGTTCAGGCAGTGCTTGGGCTACTTCAGTATCCTTTCATGGGGGATAAGCTCAGTTCTCGAGCTATACTATGCTGCTCTGCCAGCCTATAGTATCATCACCAACTCACACTTCTTGCCGAAGGGCCAAGAACCGGCTTACTATATACTCGTAGCTGTGTTTCTGATCTACACTATGTACACTTCATCCGAGTACCTTAGAACCGGTCAATCAATCCAAGCATGGTGGAATAACCAAAGAATGGGAAGAATAATCTCAATGAGTGCATGGCTTTTTGGATTTCTTAGTGTCATACTCAAACTCTTGGGCATATCCGAGACAGTCTTCGAGGTGACACGAAAAGACCAATCTACATCAAGCGATGAAGGCACTGAAGATACTGAAGCCGGAAAATTCACCTTTGACCAGTCCCCAGTTTTCATACCTCCCACAGCAATGTTGTTTCTGCAATTAACAGCACTGGCCACCGCTTTGTTGGGGCTTCAACCACCAGCCCGTGATGGGGTGGAATCAGGCTCTTTGGAGACCATGTGCAGTGTTTTGTTGGTGATATTAGGATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009832 GO:0009833 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0021700 GO:0022402 GO:0022622 GO:0030154 GO:0030243 GO:0030244 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0051273 GO:0051274 GO:0051301 GO:0060560 GO:0061640 GO:0071554 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901576 GO:1903047 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

699

Amino Acids

78.32

Weight (kDa)

5.79

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	73 - 371	2e-87	Cellulose synthase
Cellulose_synt	PF03552	388 - 669	9.2e-48	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32530 AT2G32540 AT2G32620 AT2G32620 AT2G32620 AT2G32620 AT4G15290 AT4G15320 AT4G15320 AT4G15320 AT4G15320 AT4G15320
fragaria_vesca	FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42780 FvH4_6g42800 FvH4_6g42840 FvH4_6g42840
malus_domestica	MD09G1072200.v1.1 MD17G1099500.v1.1 MD17G1099600.v1.1 MD17G1099800.v1.1
prunus_persica	Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214200_v2.0.a1 Prupe.3G214400_v2.0.a1 Prupe.3G214400_v2.0.a1
pyrus_communis	pycom09g03400 pycom17g09490 pycom17g09510
rosa_chinensis	RchiOBHm_Chr2g0158721 RchiOBHm_Chr2g0158731 RchiOBHm_Chr2g0158741 RchiOBHm_Chr2g0158761 RchiOBHm_Chr2g0158771
rosa_laevigata	RLG00000021109 RLG00000021110 RLG00000021111
rosa_multiflora	Rmu_co8470225.1_g000001 Rmu_sc0003664.1_g000005 Rmu_sc0003664.1_g000006 Rmu_sc0003664.1_g000007 Rmu_sc0003664.1_g000012 Rmu_sc0004188.1_g000001 Rmu_sc0004188.1_g000006 Rmu_sc0004188.1_g000008 Rmu_sc0024429.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091020 Rroxscaffold_2G00091030 Rroxscaffold_2G00091040 Rroxscaffold_2G00091050 Rroxscaffold_2G00091060 Rroxscaffold_2G00091080
rosa_rugosa	Rorug02G0471500 Rorug02G0471600 Rorug02G0471800 Rorug02G0471900 Rorug02G0471900 Rorug02G0472200 Rorug02G0472300 Rorug07G0260700
rosa_samantha	Rh1BG072200 Rh2AG537300 Rh2AG537400 Rh2AG537500 Rh2AG538000 Rh2AG538100 Rh2AG538200 Rh2BG550500 Rh2BG550600 Rh2BG550800 Rh2CG521000 Rh2CG521100 Rh2CG521200 Rh2CG521300 Rh2DG560200 Rh2DG560300 Rh2DG560400 Rh2DG560500 Rh2DG560600
rosa_wichuraiana	Rw2G044490 Rw2G044500 Rw2G044510 Rw2G044520 Rw2G044530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	11
AasI	GACNNNNNNGTC	1 cut(s)	845
Acc16I	TGCGCA	1 cut(s)	575
AccB1I	GGYRCC	1 cut(s)	193
AccB7I	CCANNNNNTGG	1 cut(s)	1777
AccI	GTMKAC	1 cut(s)	219
AccII	CGCG	1 cut(s)	1424
AccIII	TCCGGA	1 cut(s)	1040
AciI	CCGC	2 cut(s)	178, 2004
AclWI	GGATC	8 cut(s)	142, 155, 901, 956, 1051, 1320, 1333, 1374
AcoI	YGGCCR	2 cut(s)	737, 1998
AcsI	RAATTY	4 cut(s)	503, 1020, 1178, 1928
AcuI	CTGAAG	5 cut(s)	100, 1356, 1546, 1929, 1938
AfaI	GTAC	5 cut(s)	422, 633, 1519, 1715, 1730
AflIII	ACRYGT	1 cut(s)	840
AgeI	ACCGGT	1 cut(s)	1739
AgsI	TTSAA	9 cut(s)	61, 254, 431, 508, 605, 1106, 1359, 1484, 2021
AjnI	CCWGG	1 cut(s)	77
AjuI	GAANNNNNNNTTGG	2 cut(s)	1631, 1663
AluBI	AGCT	8 cut(s)	103, 208, 250, 495, 1193, 1587, 1600, 1691
AluI	AGCT	8 cut(s)	103, 208, 250, 495, 1193, 1587, 1600, 1691
Alw21I	GWGCWC	1 cut(s)	105
Alw26I	GTCTC	5 cut(s)	53, 291, 796, 1847, 2054
AlwI	GGATC	8 cut(s)	142, 155, 901, 956, 1051, 1320, 1333, 1374
AlwNI	CAGNNNCTG	1 cut(s)	1196
Ama87I	CYCGRG	1 cut(s)	1595
Aor13HI	TCCGGA	1 cut(s)	1040
AoxI	GGCC	7 cut(s)	737, 768, 1436, 1467, 1474, 1660, 1998
ApeKI	GCWGC	4 cut(s)	552, 1193, 1253, 1610
ApoI	RAATTY	4 cut(s)	503, 1020, 1178, 1928
AseI	ATTAAT	1 cut(s)	483
AsiGI	ACCGGT	1 cut(s)	1739
AspLEI	GCGC	3 cut(s)	576, 1424, 1426
AspS9I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
AsuC2I	CCSGG	1 cut(s)	766
AsuHPI	GGTGA	6 cut(s)	121, 349, 1627, 1879, 1924, 2095
AsuII	TTCGAA	1 cut(s)	692
AvaI	CYCGRG	1 cut(s)	1595
AvaII	GGWCC	2 cut(s)	81, 1028
AxyI	CCTNAGG	1 cut(s)	198
BaeGI	GKGCMC	1 cut(s)	1226
BaeI	ACNNNNGTAYC	2 cut(s)	1549, 1582
BalI	TGGCCA	1 cut(s)	2000
BamHI	GGATCC	2 cut(s)	147, 1325
BanI	GGYRCC	1 cut(s)	193
BanII	GRGCYC	1 cut(s)	105
BbsI	GAAGAC	2 cut(s)	931, 1852
Bbv12I	GWGCWC	1 cut(s)	105
BbvI	GCAGC	4 cut(s)	564, 1180, 1240, 1597
BccI	CCATC	5 cut(s)	92, 335, 1308, 2030, 2088
BceAI	ACGGC	1 cut(s)	752
BcgI	CGANNNNNNTGC	2 cut(s)	541, 575
BciT130I	CCWGG	1 cut(s)	79
BciVI	GTATCC	1 cut(s)	1577
BclI	TGATCA	1 cut(s)	643
BcnI	CCSGG	1 cut(s)	766
BcoDI	GTCTC	5 cut(s)	53, 291, 796, 1847, 2054
BfaI	CTAG	3 cut(s)	320, 492, 786
BfmI	CTRYAG	2 cut(s)	213, 1624
BfuI	GTATCC	1 cut(s)	1577
BglII	AGATCT	1 cut(s)	437
BisI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
BlsI	GCNGC	4 cut(s)	554, 1195, 1255, 1612
Bme1390I	CCNGG	2 cut(s)	79, 766
Bme18I	GGWCC	2 cut(s)	81, 1028
BmeT110I	CYCGRG	1 cut(s)	1595
BmgT120I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
BmiI	GGNNCC	6 cut(s)	149, 195, 405, 769, 1029, 1327
BmrFI	CCNGG	2 cut(s)	79, 766
BmrI	ACTGGG	2 cut(s)	1359, 1943
BmsI	GCATC	4 cut(s)	389, 754, 1189, 1330
BmuI	ACTGGG	2 cut(s)	1359, 1943
BoxI	GACNNNNGTC	1 cut(s)	788
BpiI	GAAGAC	2 cut(s)	931, 1852
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	1 cut(s)	918
BpuMI	CCSGG	1 cut(s)	766
Bsa29I	ATCGAT	1 cut(s)	697
BsaAI	YACGTR	1 cut(s)	1096
BsaI	GGTCTC	1 cut(s)	2054
BsaJI	CCNNGG	2 cut(s)	67, 765
BsaWI	WCCGGW	3 cut(s)	1040, 1536, 1739
BsaXI	ACNNNNNCTCC	4 cut(s)	796, 826, 2051, 2081
Bse118I	RCCGGY	3 cut(s)	1472, 1669, 1739
Bse1I	ACTGG	6 cut(s)	195, 1354, 1435, 1942, 1949, 2001
Bse21I	CCTNAGG	1 cut(s)	198
Bse3DI	GCAATG	1 cut(s)	1977
BseAI	TCCGGA	1 cut(s)	1040
BseBI	CCWGG	1 cut(s)	79
BseCI	ATCGAT	1 cut(s)	697
BseDI	CCNNGG	2 cut(s)	67, 765
BseMI	GCAATG	1 cut(s)	1977
BseMII	CTCAG	2 cut(s)	1507, 1602
BseNI	ACTGG	6 cut(s)	195, 1354, 1435, 1942, 1949, 2001
BsePI	GCGCGC	1 cut(s)	1422
BseRI	GAGGAG	1 cut(s)	41
BseSI	GKGCMC	1 cut(s)	1226
BseX3I	CGGCCG	1 cut(s)	737
BseXI	GCAGC	4 cut(s)	564, 1180, 1240, 1597
BsgI	GTGCAG	1 cut(s)	2089
Bsh1236I	CGCG	1 cut(s)	1424
Bsh1285I	CGRYCG	2 cut(s)	178, 740
BshFI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
BshNI	GGYRCC	1 cut(s)	193
BshTI	ACCGGT	1 cut(s)	1739
BshVI	ATCGAT	1 cut(s)	697
BsiEI	CGRYCG	2 cut(s)	178, 740
BsiHKAI	GWGCWC	1 cut(s)	105
BsiHKCI	CYCGRG	1 cut(s)	1595
BsiSI	CCGG	7 cut(s)	765, 1041, 1473, 1537, 1670, 1740, 1923
BslFI	GGGAC	3 cut(s)	1017, 1041, 1930
BsmAI	GTCTC	5 cut(s)	53, 291, 796, 1847, 2054
BsmBI	CGTCTC	1 cut(s)	53
BsmFI	GGGAC	3 cut(s)	1017, 1041, 1930
BsmI	GAATGC	3 cut(s)	89, 611, 1424
BsnI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
Bso31I	GGTCTC	1 cut(s)	2054
BsoBI	CYCGRG	1 cut(s)	1595
Bsp119I	TTCGAA	1 cut(s)	692
Bsp1286I	GDGCHC	2 cut(s)	105, 1226
Bsp13I	TCCGGA	1 cut(s)	1040
Bsp1407I	TGTACA	2 cut(s)	631, 1713
Bsp19I	CCATGG	1 cut(s)	67
BspACI	CCGC	2 cut(s)	178, 2004
BspANI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
BspCNI	CTCAG	2 cut(s)	1506, 1601
BspDI	ATCGAT	1 cut(s)	697
BspEI	TCCGGA	1 cut(s)	1040
BspFNI	CGCG	1 cut(s)	1424
BspLI	GGNNCC	6 cut(s)	149, 195, 405, 769, 1029, 1327
BspMAI	CTGCAG	1 cut(s)	217
BspPI	GGATC	8 cut(s)	142, 155, 901, 956, 1051, 1320, 1333, 1374
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	193
BspTNI	GGTCTC	1 cut(s)	2054
BsrDI	GCAATG	1 cut(s)	1977
BsrFI	RCCGGY	3 cut(s)	1472, 1669, 1739
BsrGI	TGTACA	2 cut(s)	631, 1713
BsrI	ACTGG	6 cut(s)	195, 1354, 1435, 1942, 1949, 2001
BssAI	RCCGGY	3 cut(s)	1472, 1669, 1739
BssECI	CCNNGG	2 cut(s)	67, 765
BssHII	GCGCGC	1 cut(s)	1422
BssT1I	CCWWGG	1 cut(s)	67
Bst2UI	CCWGG	1 cut(s)	79
Bst4CI	ACNGT	5 cut(s)	271, 280, 950, 1136, 1858
Bst6I	CTCTTC	3 cut(s)	23, 515, 1146
BstAPI	GCANNNNNTGC	1 cut(s)	193
BstAUI	TGTACA	2 cut(s)	631, 1713
BstBAI	YACGTR	1 cut(s)	1096
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	6 cut(s)	101, 325, 1424, 1440, 1478, 1620
BstDEI	CTNAG	7 cut(s)	198, 393, 548, 1493, 1588, 1733, 1820
BstDSI	CCRYGG	1 cut(s)	67
BstFNI	CGCG	1 cut(s)	1424
BstHHI	GCGC	3 cut(s)	576, 1424, 1426
BstMAI	GTCTC	5 cut(s)	53, 291, 796, 1847, 2054
BstMCI	CGRYCG	2 cut(s)	178, 740
BstMWI	GCNNNNNNNGC	4 cut(s)	193, 1199, 1619, 1902
BstNI	CCWGG	1 cut(s)	79
BstNSI	RCATGY	3 cut(s)	327, 823, 844
BstPAI	GACNNNNGTC	1 cut(s)	788
BstSCI	CCNGG	2 cut(s)	77, 764
BstSFI	CTRYAG	2 cut(s)	213, 1624
BstSLI	GKGCMC	1 cut(s)	1226
BstUI	CGCG	1 cut(s)	1424
BstV1I	GCAGC	4 cut(s)	564, 1180, 1240, 1597
BstV2I	GAAGAC	2 cut(s)	931, 1852
BstX2I	RGATCY	4 cut(s)	147, 437, 1325, 1379
BstXI	CCANNNNNNTGG	1 cut(s)	1268
BstYI	RGATCY	4 cut(s)	147, 437, 1325, 1379
BstZI	CGGCCG	1 cut(s)	737
Bsu15I	ATCGAT	1 cut(s)	697
Bsu36I	CCTNAGG	1 cut(s)	198
BsuI	GTATCC	1 cut(s)	1577
BsuRI	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
BsuTUI	ATCGAT	1 cut(s)	697
BtgI	CCRYGG	1 cut(s)	67
BtgZI	GCGATG	2 cut(s)	70, 1911
BtsI	GCAGTG	3 cut(s)	1224, 1553, 2077
BtsIMutI	CAGTG	9 cut(s)	624, 708, 932, 1224, 1347, 1553, 1905, 1994, 2077
Cac8I	GCNNGC	6 cut(s)	101, 325, 1424, 1440, 1478, 1620
CaiI	CAGNNNCTG	1 cut(s)	1196
CfoI	GCGC	3 cut(s)	576, 1424, 1426
Cfr10I	RCCGGY	3 cut(s)	1472, 1669, 1739
Cfr13I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
ClaI	ATCGAT	1 cut(s)	697
Csp6I	GTAC	5 cut(s)	421, 632, 1518, 1714, 1729
CspAI	ACCGGT	1 cut(s)	1739
CspCI	CAANNNNNGTGG	2 cut(s)	1742, 1777
CviQI	GTAC	5 cut(s)	421, 632, 1518, 1714, 1729
DdeI	CTNAG	7 cut(s)	198, 393, 548, 1493, 1588, 1733, 1820
DraI	TTTAAA	1 cut(s)	1206
DrdI	GACNNNNNNGTC	1 cut(s)	845
DseDI	GACNNNNNNGTC	1 cut(s)	845
EaeI	YGGCCR	2 cut(s)	737, 1998
EagI	CGGCCG	1 cut(s)	737
Eam1104I	CTCTTC	3 cut(s)	23, 515, 1146
EarI	CTCTTC	3 cut(s)	23, 515, 1146
Ecl136II	GAGCTC	1 cut(s)	103
EclXI	CGGCCG	1 cut(s)	737
Eco130I	CCWWGG	1 cut(s)	67
Eco24I	GRGCYC	1 cut(s)	105
Eco31I	GGTCTC	1 cut(s)	2054
Eco47I	GGWCC	2 cut(s)	81, 1028
Eco52I	CGGCCG	1 cut(s)	737
Eco53kI	GAGCTC	1 cut(s)	103
Eco57I	CTGAAG	5 cut(s)	100, 1356, 1546, 1929, 1938
Eco81I	CCTNAGG	1 cut(s)	198
Eco88I	CYCGRG	1 cut(s)	1595
EcoICRI	GAGCTC	1 cut(s)	103
EcoO109I	RGGNCCY	1 cut(s)	1028
EcoRI	GAATTC	2 cut(s)	503, 1020
EcoRII	CCWGG	1 cut(s)	77
EcoT14I	CCWWGG	1 cut(s)	67
EcoT22I	ATGCAT	1 cut(s)	919
EcoT38I	GRGCYC	1 cut(s)	105
ErhI	CCWWGG	1 cut(s)	67
Esp3I	CGTCTC	1 cut(s)	53
FalI	AAGNNNNNCTT	2 cut(s)	1143, 1175
FaqI	GGGAC	3 cut(s)	1017, 1041, 1930
FbaI	TGATCA	1 cut(s)	643
FblI	GTMKAC	1 cut(s)	219
Fnu4HI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
FriOI	GRGCYC	1 cut(s)	105
Fsp4HI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
FspBI	CTAG	3 cut(s)	320, 492, 786
FspI	TGCGCA	1 cut(s)	575
GlaI	GCGC	3 cut(s)	575, 1423, 1425
GluI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
HaeIII	GGCC	7 cut(s)	739, 770, 1438, 1469, 1476, 1662, 2000
HapII	CCGG	7 cut(s)	765, 1041, 1473, 1537, 1670, 1740, 1923
HhaI	GCGC	3 cut(s)	576, 1424, 1426
Hin6I	GCGC	3 cut(s)	574, 1422, 1424
HinP1I	GCGC	3 cut(s)	574, 1422, 1424
HincII	GTYRAC	2 cut(s)	157, 850
HindII	GTYRAC	2 cut(s)	157, 850
HinfI	GANTC	3 cut(s)	694, 789, 2045
HpaII	CCGG	7 cut(s)	765, 1041, 1473, 1537, 1670, 1740, 1923
HphI	GGTGA	6 cut(s)	121, 349, 1627, 1879, 1924, 2095
Hpy166II	GTNNAC	7 cut(s)	111, 157, 220, 274, 832, 850, 1716
Hpy188I	TCNGA	8 cut(s)	337, 595, 783, 971, 978, 1701, 1726, 1852
Hpy188III	TCNNGA	7 cut(s)	477, 726, 1017, 1041, 1047, 1415, 1595
Hpy8I	GTNNAC	7 cut(s)	111, 157, 220, 274, 832, 850, 1716
HpyAV	CCTTC	8 cut(s)	35, 124, 370, 523, 1168, 1207, 1651, 1895
HpyCH4III	ACNGT	5 cut(s)	271, 280, 950, 1136, 1858
HpyCH4IV	ACGT	1 cut(s)	1095
HpyF10VI	GCNNNNNNNGC	4 cut(s)	193, 1199, 1619, 1902
HpyF3I	CTNAG	7 cut(s)	198, 393, 548, 1493, 1588, 1733, 1820
HpySE526I	ACGT	1 cut(s)	1095
HspAI	GCGC	3 cut(s)	574, 1422, 1424
Kpn2I	TCCGGA	1 cut(s)	1040
Ksp22I	TGATCA	1 cut(s)	643
LmnI	GCTCC	1 cut(s)	817
Lsp1109I	GCAGC	4 cut(s)	564, 1180, 1240, 1597
LweI	GCATC	4 cut(s)	389, 754, 1189, 1330
MaeI	CTAG	3 cut(s)	320, 492, 786
MaeII	ACGT	1 cut(s)	1095
MaeIII	GTNAC	4 cut(s)	229, 944, 1155, 1867
MflI	RGATCY	4 cut(s)	147, 437, 1325, 1379
MhlI	GDGCHC	2 cut(s)	105, 1226
MlsI	TGGCCA	1 cut(s)	2000
MluCI	AATT	9 cut(s)	463, 480, 503, 876, 1020, 1090, 1178, 1928, 1985
MluNI	TGGCCA	1 cut(s)	2000
MlyI	GAGTC	1 cut(s)	798
MmeI	TCCRAC	2 cut(s)	674, 1355
Mox20I	TGGCCA	1 cut(s)	2000
Mph1103I	ATGCAT	1 cut(s)	919
MroI	TCCGGA	1 cut(s)	1040
MscI	TGGCCA	1 cut(s)	2000
MseI	TTAA	3 cut(s)	483, 1205, 1988
MslI	CAYNNNNRTG	2 cut(s)	131, 1970
Msp20I	TGGCCA	1 cut(s)	2000
MspA1I	CMGCKG	1 cut(s)	1193
MspI	CCGG	7 cut(s)	765, 1041, 1473, 1537, 1670, 1740, 1923
MspR9I	CCNGG	2 cut(s)	79, 766
Mva1269I	GAATGC	3 cut(s)	89, 611, 1424
MvaI	CCWGG	1 cut(s)	79
MvnI	CGCG	1 cut(s)	1424
MwoI	GCNNNNNNNGC	4 cut(s)	193, 1199, 1619, 1902
NciI	CCSGG	1 cut(s)	766
NcoI	CCATGG	1 cut(s)	67
NlaIV	GGNNCC	6 cut(s)	149, 195, 405, 769, 1029, 1327
NmuCI	GTSAC	3 cut(s)	229, 944, 1867
NsbI	TGCGCA	1 cut(s)	575
NsiI	ATGCAT	1 cut(s)	919
NspI	RCATGY	3 cut(s)	327, 823, 844
NspV	TTCGAA	1 cut(s)	692
PaeI	GCATGC	1 cut(s)	327
PaeR7I	CTCGAG	1 cut(s)	1595
PauI	GCGCGC	1 cut(s)	1422
PciI	ACATGT	1 cut(s)	840
PctI	GAATGC	3 cut(s)	89, 611, 1424
PfeI	GAWTC	2 cut(s)	694, 2045
PflMI	CCANNNNNTGG	1 cut(s)	1777
PinAI	ACCGGT	1 cut(s)	1739
PkrI	GCNGC	4 cut(s)	554, 1195, 1255, 1612
PleI	GAGTC	1 cut(s)	797
PpsI	GAGTC	1 cut(s)	797
Ppu21I	YACGTR	1 cut(s)	1096
PpuMI	RGGWCCY	1 cut(s)	1028
PscI	ACATGT	1 cut(s)	840
PshAI	GACNNNNGTC	1 cut(s)	788
PshBI	ATTAAT	1 cut(s)	483
PsiI	TTATAA	1 cut(s)	11
Psp124BI	GAGCTC	1 cut(s)	105
Psp5II	RGGWCCY	1 cut(s)	1028
Psp6I	CCWGG	1 cut(s)	77
PspGI	CCWGG	1 cut(s)	77
PspN4I	GGNNCC	6 cut(s)	149, 195, 405, 769, 1029, 1327
PspPI	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
PspPPI	RGGWCCY	1 cut(s)	1028
PsrI	GAACNNNNNNTAC	2 cut(s)	264, 296
PstI	CTGCAG	1 cut(s)	217
PstNI	CAGNNNCTG	1 cut(s)	1196
PsuI	RGATCY	4 cut(s)	147, 437, 1325, 1379
PteI	GCGCGC	1 cut(s)	1422
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	5 cut(s)	422, 633, 1519, 1715, 1730
RsaNI	GTAC	5 cut(s)	421, 632, 1518, 1714, 1729
RseI	CAYNNNNRTG	2 cut(s)	131, 1970
SacI	GAGCTC	1 cut(s)	105
SaqAI	TTAA	3 cut(s)	483, 1205, 1988
SatI	GCNGC	4 cut(s)	553, 1194, 1254, 1611
Sau96I	GGNCC	6 cut(s)	81, 768, 1028, 1436, 1467, 1660
SchI	GAGTC	1 cut(s)	798
ScrFI	CCNGG	2 cut(s)	79, 766
SduI	GDGCHC	2 cut(s)	105, 1226
SfaNI	GCATC	4 cut(s)	389, 754, 1189, 1330
SfcI	CTRYAG	2 cut(s)	213, 1624
Sfr274I	CTCGAG	1 cut(s)	1595
SfuI	TTCGAA	1 cut(s)	692
SinI	GGWCC	2 cut(s)	81, 1028
SlaI	CTCGAG	1 cut(s)	1595
SmiMI	CAYNNNNRTG	2 cut(s)	131, 1970
SmlI	CTYRAG	2 cut(s)	933, 1595
SmoI	CTYRAG	2 cut(s)	933, 1595
SphI	GCATGC	1 cut(s)	327
Sse9I	AATT	9 cut(s)	463, 480, 503, 876, 1020, 1090, 1178, 1928, 1985
SsiI	CCGC	2 cut(s)	178, 2004
SspMI	CTAG	3 cut(s)	320, 492, 786
SstI	GAGCTC	1 cut(s)	105
StyD4I	CCNGG	2 cut(s)	77, 764
StyI	CCWWGG	1 cut(s)	67
TaaI	ACNGT	5 cut(s)	271, 280, 950, 1136, 1858
TaiI	ACGT	1 cut(s)	1098
TaqI	TCGA	5 cut(s)	561, 692, 697, 1596, 1863
TasI	AATT	9 cut(s)	463, 480, 503, 876, 1020, 1090, 1178, 1928, 1985
TatI	WGTACW	3 cut(s)	420, 631, 1713
TfiI	GAWTC	2 cut(s)	694, 2045
Tru1I	TTAA	3 cut(s)	483, 1205, 1988
Tru9I	TTAA	3 cut(s)	483, 1205, 1988
TscAI	CASTG	9 cut(s)	624, 708, 932, 1224, 1354, 1553, 1912, 2001, 2077
TseFI	GTSAC	3 cut(s)	229, 944, 1867
TseI	GCWGC	4 cut(s)	552, 1193, 1253, 1610
Tsp45I	GTSAC	3 cut(s)	229, 944, 1867
TspGWI	ACGGA	1 cut(s)	579
TspRI	CASTG	9 cut(s)	624, 708, 932, 1224, 1354, 1553, 1912, 2001, 2077
Van91I	CCANNNNNTGG	1 cut(s)	1777
VpaK11BI	GGWCC	2 cut(s)	81, 1028
VspI	ATTAAT	1 cut(s)	483
XapI	RAATTY	4 cut(s)	503, 1020, 1178, 1928
XceI	RCATGY	3 cut(s)	327, 823, 844
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2008
XhoI	CTCGAG	1 cut(s)	1595
XmiI	GTMKAC	1 cut(s)	219
XspI	CTAG	3 cut(s)	320, 492, 786
Zsp2I	ATGCAT	1 cut(s)	919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.