Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0000757

Physical Location & Seq

Genomic Coordinates Reverse (-)

10002163 .. 10003197

Gene Structure 1035 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1082100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGAGGAAGAAACTTACATCTGTTTGGGCCCACAATTTTAAGCAAGAAATCTCCTCCGTCGATCGGTGTCTCTGCCGTTTTCCGATCGTCTCGTTCGACACCGAATTTCCGGGGTTTCTCCGCAACACCCCCAGAGGGGCTTCCGAGGGCCTCTGTTACCAAGATCTCGCATTTAACGTCGATTCTCTCAAACTCATCCAACTGGGTATCACCCTGTTCGACGACGGCGGCAACGTCGGCGGCACCTGGGAGTTCAACTTTCGGGGTTTTGACGAGGAAACCGACCCCCATGTTCCAGAATCCATCGCCCTCCTCAAAACCAATGGCTTGGATCTCGAGAAATTTGGGAAGTTCGGCATCGATTCGGATATTTTTGTGGAGGGTTTCGTTGAGATTTTAAGGGTGCACAGGGGGCGGCTCGTATGGGTGAGCTTCCACGGCCTCTACGACTCGGCCTATGTAATGAAGCTGGTGACGAGGAAGACCATCCCCAGCTCCCCCACTGAATTCGCAAAGATGGCAGGTCGTTTGTTCGAGAGGGTCTACGACTTGAAGTTTATGGCCAAGTACTGCCCGGGCCTATTTGGGGGCGAAATTGGGCTCGAAAGAATGGCGAAAATCCTCGGAGTGCAGCGTTGTGGGGATGCCCATCAAGCGGGTTCCGACAGTCTGTTGACGGCTGAGTTATTCCTGAAGATGAGGAGTCAATTTGGGTTGAAGCCTGGAATGTACGAGGGATTTCTATATAGTCTTAGTCCAAAGATTTGTGGTGCTTCTAATTATCTTTGTTCCTCTGTACACACCGTACACAGAGCTCCTCCTCATTCGGTGATTCTTGTCCCTGCGGTCCCCACAAGACCCATCATTCTCATCCGCCACCCCTTCTCCCGTGATAAATCATGCCAGAGCCGCCATCATGCTGCCCCAGTTATGCTTTACCGCCATCCTCCTCCTCCCGTGTTTCTGCATCGGCGTCCATGTAGTCCTTTTCCTGCTTTGCCTCAAGCCCTTCCTGAAAACCACATTCACATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000288 GO:0000291 GO:0000932 GO:0000956 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004535 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0017148 GO:0019222 GO:0019439 GO:0030014 GO:0030015 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0032991 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

CAF1

Protein Analysis

345

Amino Acids

38.72

Weight (kDa)

8.91

Isoelectric Point (pI)

46.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1	PF04857	8 - 120	8.3e-07	CAF1 family ribonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000757)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06450 AT1G27820 AT1G27890 AT1G61470 AT3G44240
fragaria_vesca	FvH4_6g28110 FvH4_6g28140 FvH4_6g29280 FvH4_6g29280
malus_domestica	MD03G1041900.v1.1 MD09G1229300.v1.1 MD11G1042700.v1.1 MD12G1082100.v1.1 MD14G1080800.v1.1
prunus_persica	Prupe.1G188200_v2.0.a1 Prupe.1G190800_v2.0.a1 Prupe.1G190900_v2.0.a1 Prupe.3G105100_v2.0.a1 Prupe.7G010200_v2.0.a1
pyrus_communis	pycom09g14790 pycom14g07010
rosa_chinensis	RchiOBHm_Chr2g0132091 RchiOBHm_Chr2g0132101 RchiOBHm_Chr2g0134441 RchiOBHm_Chr2g0134461 RchiOBHm_Chr2g0136851 RchiOBHm_Chr2g0167821 RchiOBHm_Chr2g0167861 RchiOBHm_Chr2g0167901 RchiOBHm_Chr2g0167921 RchiOBHm_Chr6g0266841
rosa_laevigata	RLG00000019225 RLG00000019226 RLG00000019393
rosa_multiflora	Rmu_sc0001299.1_g000004 Rmu_sc0005571.1_g000018
rosa_roxburghii	Rroxscaffold_2G00110210 Rroxscaffold_2G00110240 Rroxscaffold_2G00112400 Rroxscaffold_3G00239330 Rroxscaffold_4G00313080
rosa_rugosa	Rorug02G0302000 Rorug02G0302200 Rorug02G0317200 Rorug02G0317200 Rorug03G0220600
rosa_samantha	Rh2AG355100 Rh2AG355200 Rh2AG369800 Rh2AG369900 Rh2AG384800 Rh2CG338700 Rh2CG338800 Rh2CG353700 Rh2CG371400 Rh2DG370100 Rh2DG377900 Rh2DG378000 Rh2DG392800 Rh2DG392900 Rh2DG408200 Rh6BG148800 Rh6BG149300 Rh6CG159200 Rh6DG133000 Rh6DG133400
rosa_wichuraiana	Rw1G013790 Rw2G028830 Rw2G028840 Rw2G031470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	512
AccB1I	GGYRCC	1 cut(s)	242
AccI	GTMKAC	1 cut(s)	543
AciI	CCGC	9 cut(s)	121, 228, 240, 415, 656, 845, 874, 910, 940
AclWI	GGATC	1 cut(s)	339
AcoI	YGGCCR	1 cut(s)	561
AcsI	RAATTY	3 cut(s)	104, 341, 506
AcuI	CTGAAG	1 cut(s)	713
AcyI	GRCGYC	1 cut(s)	973
AfaI	GTAC	4 cut(s)	569, 731, 798, 807
AfiI	CCNNNNNNNGG	5 cut(s)	63, 135, 136, 586, 655
AflIII	ACRYGT	1 cut(s)	1029
AgsI	TTSAA	3 cut(s)	256, 553, 718
AjnI	CCWGG	2 cut(s)	245, 721
AluBI	AGCT	4 cut(s)	432, 469, 495, 815
AluI	AGCT	4 cut(s)	432, 469, 495, 815
Alw21I	GWGCWC	2 cut(s)	408, 817
Alw26I	GTCTC	2 cut(s)	74, 94
Alw44I	GTGCAC	1 cut(s)	404
AlwI	GGATC	1 cut(s)	339
Ama87I	CYCGRG	2 cut(s)	335, 574
AoxI	GGCC	6 cut(s)	27, 148, 439, 453, 561, 577
ApaI	GGGCCC	1 cut(s)	31
ApaLI	GTGCAC	1 cut(s)	404
ApeKI	GCWGC	2 cut(s)	631, 920
ApoI	RAATTY	3 cut(s)	104, 341, 506
AspS9I	GGNCC	5 cut(s)	27, 28, 148, 577, 847
AsuC2I	CCSGG	3 cut(s)	111, 575, 576
AsuHPI	GGTGA	4 cut(s)	202, 439, 484, 841
AvaI	CYCGRG	2 cut(s)	335, 574
AvaII	GGWCC	1 cut(s)	847
BaeGI	GKGCMC	2 cut(s)	31, 408
BalI	TGGCCA	1 cut(s)	563
BanI	GGYRCC	1 cut(s)	242
BanII	GRGCYC	3 cut(s)	31, 603, 817
BbsI	GAAGAC	1 cut(s)	488
Bbv12I	GWGCWC	2 cut(s)	408, 817
BbvI	GCAGC	2 cut(s)	643, 907
BccI	CCATC	7 cut(s)	311, 494, 511, 657, 869, 921, 951
BceAI	ACGGC	4 cut(s)	60, 241, 454, 693
BciT130I	CCWGG	2 cut(s)	247, 723
BcnI	CCSGG	3 cut(s)	111, 575, 576
BcoDI	GTCTC	2 cut(s)	74, 94
BfuAI	ACCTGC	1 cut(s)	512
BglII	AGATCT	1 cut(s)	163
BisI	GCNGC	6 cut(s)	229, 241, 416, 632, 910, 921
BlsI	GCNGC	6 cut(s)	230, 242, 417, 633, 911, 922
BmcAI	AGTACT	1 cut(s)	569
Bme1390I	CCNGG	5 cut(s)	111, 247, 575, 576, 723
Bme18I	GGWCC	1 cut(s)	847
BmeT110I	CYCGRG	2 cut(s)	335, 574
BmgT120I	GGNCC	5 cut(s)	27, 28, 148, 577, 847
BmiI	GGNNCC	4 cut(s)	29, 244, 661, 849
BmrFI	CCNGG	5 cut(s)	111, 247, 575, 576, 723
BmrI	ACTGGG	2 cut(s)	212, 920
BmsI	GCATC	3 cut(s)	366, 634, 976
BmuI	ACTGGG	2 cut(s)	212, 920
BpiI	GAAGAC	1 cut(s)	488
BpuEI	CTTGAG	1 cut(s)	987
BpuMI	CCSGG	3 cut(s)	111, 575, 576
Bsa29I	ATCGAT	1 cut(s)	360
BsaBI	GATNNNNATC	1 cut(s)	648
BsaHI	GRCGYC	1 cut(s)	973
BsaJI	CCNNGG	6 cut(s)	110, 144, 246, 436, 574, 622
BsaXI	ACNNNNNCTCC	2 cut(s)	869, 899
Bsc4I	CCNNNNNNNGG	5 cut(s)	63, 135, 136, 586, 655
Bse1I	ACTGG	2 cut(s)	207, 926
Bse8I	GATNNNNATC	1 cut(s)	648
BseBI	CCWGG	2 cut(s)	247, 723
BseCI	ATCGAT	1 cut(s)	360
BseDI	CCNNGG	6 cut(s)	110, 144, 246, 436, 574, 622
BseGI	GGATG	5 cut(s)	195, 486, 649, 870, 943
BseJI	GATNNNNATC	1 cut(s)	648
BseLI	CCNNNNNNNGG	5 cut(s)	63, 135, 136, 586, 655
BseMII	CTCAG	1 cut(s)	672
BseNI	ACTGG	2 cut(s)	207, 926
BseRI	GAGGAG	7 cut(s)	43, 302, 715, 807, 810, 939, 942
BseSI	GKGCMC	2 cut(s)	31, 408
BseXI	GCAGC	2 cut(s)	643, 907
BseYI	CCCAGC	1 cut(s)	491
BsgI	GTGCAG	1 cut(s)	650
Bsh1285I	CGRYCG	2 cut(s)	64, 87
BshFI	GGCC	6 cut(s)	29, 150, 441, 455, 563, 579
BshNI	GGYRCC	1 cut(s)	242
BshVI	ATCGAT	1 cut(s)	360
BsiEI	CGRYCG	2 cut(s)	64, 87
BsiHKAI	GWGCWC	2 cut(s)	408, 817
BsiHKCI	CYCGRG	2 cut(s)	335, 574
BsiSI	CCGG	2 cut(s)	110, 575
BslFI	GGGAC	2 cut(s)	824, 833
BslI	CCNNNNNNNGG	5 cut(s)	63, 135, 136, 586, 655
BsmAI	GTCTC	2 cut(s)	74, 94
BsmBI	CGTCTC	1 cut(s)	94
BsmFI	GGGAC	2 cut(s)	824, 833
BsnI	GGCC	6 cut(s)	29, 150, 441, 455, 563, 579
BsoBI	CYCGRG	2 cut(s)	335, 574
Bsp120I	GGGCCC	1 cut(s)	27
Bsp1286I	GDGCHC	4 cut(s)	31, 408, 603, 817
Bsp1407I	TGTACA	1 cut(s)	796
Bsp143I	GATC	4 cut(s)	61, 84, 163, 331
BspACI	CCGC	9 cut(s)	121, 228, 240, 415, 656, 845, 874, 910, 940
BspANI	GGCC	6 cut(s)	29, 150, 441, 455, 563, 579
BspCNI	CTCAG	1 cut(s)	673
BspDI	ATCGAT	1 cut(s)	360
BspLI	GGNNCC	4 cut(s)	29, 244, 661, 849
BspMI	ACCTGC	1 cut(s)	512
BspPI	GGATC	1 cut(s)	339
BspT107I	GGYRCC	1 cut(s)	242
BsrGI	TGTACA	1 cut(s)	796
BsrI	ACTGG	2 cut(s)	207, 926
BssECI	CCNNGG	6 cut(s)	110, 144, 246, 436, 574, 622
BssMI	GATC	4 cut(s)	61, 84, 163, 331
BssNI	GRCGYC	1 cut(s)	973
Bst2UI	CCWGG	2 cut(s)	247, 723
Bst4CI	ACNGT	2 cut(s)	668, 805
BstACI	GRCGYC	1 cut(s)	973
BstAUI	TGTACA	1 cut(s)	796
BstDEI	CTNAG	2 cut(s)	681, 752
BstDSI	CCRYGG	1 cut(s)	436
BstF5I	GGATG	5 cut(s)	195, 486, 649, 870, 943
BstKTI	GATC	4 cut(s)	64, 87, 166, 334
BstMAI	GTCTC	2 cut(s)	74, 94
BstMBI	GATC	4 cut(s)	61, 84, 163, 331
BstMCI	CGRYCG	2 cut(s)	64, 87
BstMWI	GCNNNNNNNGC	6 cut(s)	237, 412, 438, 518, 653, 909
BstNI	CCWGG	2 cut(s)	247, 723
BstNSI	RCATGY	1 cut(s)	1033
BstSCI	CCNGG	5 cut(s)	109, 245, 573, 574, 721
BstSLI	GKGCMC	2 cut(s)	31, 408
BstV1I	GCAGC	2 cut(s)	643, 907
BstV2I	GAAGAC	1 cut(s)	488
BstX2I	RGATCY	2 cut(s)	163, 331
BstXI	CCANNNNNNTGG	1 cut(s)	328
BstYI	RGATCY	2 cut(s)	163, 331
Bsu15I	ATCGAT	1 cut(s)	360
BsuRI	GGCC	6 cut(s)	29, 150, 441, 455, 563, 579
BsuTUI	ATCGAT	1 cut(s)	360
BtgI	CCRYGG	1 cut(s)	436
BtgZI	GCGATG	1 cut(s)	289
BtsCI	GGATG	5 cut(s)	195, 486, 649, 870, 943
BtsIMutI	CAGTG	1 cut(s)	501
BveI	ACCTGC	1 cut(s)	512
Cfr13I	GGNCC	5 cut(s)	27, 28, 148, 577, 847
Cfr9I	CCCGGG	1 cut(s)	574
ClaI	ATCGAT	1 cut(s)	360
CseI	GACGC	1 cut(s)	962
Csp6I	GTAC	4 cut(s)	568, 730, 797, 806
CviAII	CATG	5 cut(s)	290, 900, 917, 978, 1030
CviQI	GTAC	4 cut(s)	568, 730, 797, 806
DdeI	CTNAG	2 cut(s)	681, 752
DpnI	GATC	4 cut(s)	63, 86, 165, 333
DpnII	GATC	4 cut(s)	61, 84, 163, 331
EaeI	YGGCCR	1 cut(s)	561
EciI	GGCGGA	1 cut(s)	863
Ecl136II	GAGCTC	1 cut(s)	815
Eco24I	GRGCYC	3 cut(s)	31, 603, 817
Eco47I	GGWCC	1 cut(s)	847
Eco53kI	GAGCTC	1 cut(s)	815
Eco57I	CTGAAG	1 cut(s)	713
Eco88I	CYCGRG	2 cut(s)	335, 574
EcoICRI	GAGCTC	1 cut(s)	815
EcoO109I	RGGNCCY	1 cut(s)	148
EcoRI	GAATTC	1 cut(s)	506
EcoRII	CCWGG	2 cut(s)	245, 721
EcoT38I	GRGCYC	3 cut(s)	31, 603, 817
Esp3I	CGTCTC	1 cut(s)	94
FaeI	CATG	5 cut(s)	293, 903, 920, 981, 1033
FaqI	GGGAC	2 cut(s)	824, 833
FatI	CATG	5 cut(s)	289, 899, 916, 977, 1029
FauI	CCCGC	1 cut(s)	649
FblI	GTMKAC	1 cut(s)	543
Fnu4HI	GCNGC	6 cut(s)	229, 241, 416, 632, 910, 921
FokI	GGATG	5 cut(s)	182, 473, 656, 857, 930
FriOI	GRGCYC	3 cut(s)	31, 603, 817
Fsp4HI	GCNGC	6 cut(s)	229, 241, 416, 632, 910, 921
GluI	GCNGC	6 cut(s)	229, 241, 416, 632, 910, 921
GsaI	CCCAGC	1 cut(s)	495
HaeIII	GGCC	6 cut(s)	29, 150, 441, 455, 563, 579
HapII	CCGG	2 cut(s)	110, 575
HgaI	GACGC	1 cut(s)	962
Hin1I	GRCGYC	1 cut(s)	973
Hin1II	CATG	5 cut(s)	293, 903, 920, 981, 1033
HincII	GTYRAC	1 cut(s)	675
HindII	GTYRAC	1 cut(s)	675
HinfI	GANTC	6 cut(s)	182, 299, 362, 449, 703, 832
HpaII	CCGG	2 cut(s)	110, 575
HphI	GGTGA	4 cut(s)	202, 439, 484, 841
Hpy166II	GTNNAC	5 cut(s)	406, 544, 675, 799, 808
Hpy188I	TCNGA	5 cut(s)	84, 145, 367, 626, 664
Hpy188III	TCNNGA	6 cut(s)	296, 335, 337, 535, 691, 1013
Hpy8I	GTNNAC	5 cut(s)	406, 544, 675, 799, 808
Hpy99I	CGWCG	5 cut(s)	62, 182, 224, 227, 239
HpyAV	CCTTC	2 cut(s)	892, 1019
HpyCH4III	ACNGT	2 cut(s)	668, 805
HpyCH4IV	ACGT	2 cut(s)	177, 234
HpyCH4V	TGCA	3 cut(s)	406, 631, 967
HpyF10VI	GCNNNNNNNGC	6 cut(s)	237, 412, 438, 518, 653, 909
HpyF3I	CTNAG	2 cut(s)	681, 752
HpySE526I	ACGT	2 cut(s)	177, 234
Hsp92I	GRCGYC	1 cut(s)	973
Hsp92II	CATG	5 cut(s)	293, 903, 920, 981, 1033
Kzo9I	GATC	4 cut(s)	61, 84, 163, 331
LmnI	GCTCC	2 cut(s)	500, 820
Lsp1109I	GCAGC	2 cut(s)	643, 907
LweI	GCATC	3 cut(s)	366, 634, 976
MaeII	ACGT	2 cut(s)	177, 234
MaeIII	GTNAC	2 cut(s)	155, 472
MalI	GATC	4 cut(s)	63, 86, 165, 333
MboI	GATC	4 cut(s)	61, 84, 163, 331
MboII	GAAGA	3 cut(s)	19, 493, 706
MflI	RGATCY	2 cut(s)	163, 331
MhlI	GDGCHC	4 cut(s)	31, 408, 603, 817
MlsI	TGGCCA	1 cut(s)	563
MluCI	AATT	7 cut(s)	34, 104, 341, 506, 594, 707, 778
MluNI	TGGCCA	1 cut(s)	563
MlyI	GAGTC	2 cut(s)	443, 712
MmeI	TCCRAC	2 cut(s)	223, 687
Mox20I	TGGCCA	1 cut(s)	563
MscI	TGGCCA	1 cut(s)	563
MseI	TTAA	3 cut(s)	39, 174, 398
MslI	CAYNNNNRTG	1 cut(s)	1028
Msp20I	TGGCCA	1 cut(s)	563
MspI	CCGG	2 cut(s)	110, 575
MspR9I	CCNGG	5 cut(s)	111, 247, 575, 576, 723
MvaI	CCWGG	2 cut(s)	247, 723
MwoI	GCNNNNNNNGC	6 cut(s)	237, 412, 438, 518, 653, 909
NciI	CCSGG	3 cut(s)	111, 575, 576
NdeII	GATC	4 cut(s)	61, 84, 163, 331
NlaIII	CATG	5 cut(s)	293, 903, 920, 981, 1033
NlaIV	GGNNCC	4 cut(s)	29, 244, 661, 849
NmeAIII	GCCGAG	1 cut(s)	431
NmuCI	GTSAC	1 cut(s)	472
NspI	RCATGY	1 cut(s)	1033
PaeR7I	CTCGAG	1 cut(s)	335
PciI	ACATGT	1 cut(s)	1029
PcsI	WCGNNNNNNNCGW	5 cut(s)	93, 174, 231, 279, 444
PfeI	GAWTC	4 cut(s)	182, 299, 362, 832
PkrI	GCNGC	6 cut(s)	230, 242, 417, 633, 911, 922
Ple19I	CGATCG	2 cut(s)	64, 87
PleI	GAGTC	2 cut(s)	443, 711
PpsI	GAGTC	2 cut(s)	443, 711
PscI	ACATGT	1 cut(s)	1029
Psp124BI	GAGCTC	1 cut(s)	817
Psp6I	CCWGG	2 cut(s)	245, 721
PspFI	CCCAGC	1 cut(s)	491
PspGI	CCWGG	2 cut(s)	245, 721
PspN4I	GGNNCC	4 cut(s)	29, 244, 661, 849
PspOMI	GGGCCC	1 cut(s)	27
PspPI	GGNCC	5 cut(s)	27, 28, 148, 577, 847
PsuI	RGATCY	2 cut(s)	163, 331
PvuI	CGATCG	2 cut(s)	64, 87
RsaI	GTAC	4 cut(s)	569, 731, 798, 807
RsaNI	GTAC	4 cut(s)	568, 730, 797, 806
RseI	CAYNNNNRTG	1 cut(s)	1028
SacI	GAGCTC	1 cut(s)	817
SaqAI	TTAA	3 cut(s)	39, 174, 398
SatI	GCNGC	6 cut(s)	229, 241, 416, 632, 910, 921
Sau3AI	GATC	4 cut(s)	61, 84, 163, 331
Sau96I	GGNCC	5 cut(s)	27, 28, 148, 577, 847
ScaI	AGTACT	1 cut(s)	569
SchI	GAGTC	2 cut(s)	443, 712
ScrFI	CCNGG	5 cut(s)	111, 247, 575, 576, 723
SduI	GDGCHC	4 cut(s)	31, 408, 603, 817
SetI	ASST	8 cut(s)	180, 237, 248, 434, 471, 497, 526, 817
SfaNI	GCATC	3 cut(s)	366, 634, 976
Sfr274I	CTCGAG	1 cut(s)	335
SinI	GGWCC	1 cut(s)	847
SlaI	CTCGAG	1 cut(s)	335
SmaI	CCCGGG	1 cut(s)	576
SmiMI	CAYNNNNRTG	1 cut(s)	1028
SmlI	CTYRAG	2 cut(s)	335, 1002
SmoI	CTYRAG	2 cut(s)	335, 1002
SrfI	GCCCGGGC	1 cut(s)	576
Sse9I	AATT	7 cut(s)	34, 104, 341, 506, 594, 707, 778
SsiI	CCGC	9 cut(s)	121, 228, 240, 415, 656, 845, 874, 910, 940
SstI	GAGCTC	1 cut(s)	817
StyD4I	CCNGG	5 cut(s)	109, 245, 573, 574, 721
TaaI	ACNGT	2 cut(s)	668, 805
TaiI	ACGT	2 cut(s)	180, 237
TaqI	TCGA	8 cut(s)	60, 96, 180, 219, 336, 360, 534, 603
TasI	AATT	7 cut(s)	34, 104, 341, 506, 594, 707, 778
TatI	WGTACW	2 cut(s)	567, 796
TauI	GCSGC	4 cut(s)	231, 243, 418, 912
TfiI	GAWTC	4 cut(s)	182, 299, 362, 832
Tru1I	TTAA	3 cut(s)	39, 174, 398
Tru9I	TTAA	3 cut(s)	39, 174, 398
TscAI	CASTG	1 cut(s)	508
TseFI	GTSAC	1 cut(s)	472
TseI	GCWGC	2 cut(s)	631, 920
Tsp45I	GTSAC	1 cut(s)	472
TspDTI	ATGAA	1 cut(s)	479
TspGWI	ACGGA	1 cut(s)	46
TspMI	CCCGGG	1 cut(s)	574
TspRI	CASTG	1 cut(s)	508
VneI	GTGCAC	1 cut(s)	404
VpaK11BI	GGWCC	1 cut(s)	847
XapI	RAATTY	3 cut(s)	104, 341, 506
XceI	RCATGY	1 cut(s)	1033
XhoI	CTCGAG	1 cut(s)	335
XmaI	CCCGGG	1 cut(s)	574
XmiI	GTMKAC	1 cut(s)	543
ZrmI	AGTACT	1 cut(s)	569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.