CCR4-associated factor 1 homolog
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Auxin_inducible | PF02519 | 10 - 80 | 5.4e-25 | Auxin responsive protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 189, 238 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 188 |
| AflII | CTTAAG | 1 cut(s) | 241 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AjnI | CCWGG | 1 cut(s) | 16 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 117, 149, 150, 182 |
| AluBI | AGCT | 1 cut(s) | 155 |
| AluI | AGCT | 1 cut(s) | 155 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AsuNHI | GCTAGC | 1 cut(s) | 26 |
| BbsI | GAAGAC | 1 cut(s) | 219 |
| BccI | CCATC | 1 cut(s) | 183 |
| BciT130I | CCWGG | 1 cut(s) | 18 |
| BciVI | GTATCC | 1 cut(s) | 164 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BfrI | CTTAAG | 1 cut(s) | 241 |
| BfuI | GTATCC | 1 cut(s) | 164 |
| Bme1390I | CCNGG | 1 cut(s) | 18 |
| BmiI | GGNNCC | 1 cut(s) | 105 |
| BmrFI | CCNGG | 1 cut(s) | 18 |
| BmtI | GCTAGC | 1 cut(s) | 30 |
| BpiI | GAAGAC | 1 cut(s) | 219 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 188 |
| BseBI | CCWGG | 1 cut(s) | 18 |
| BseGI | GGATG | 1 cut(s) | 178 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 188 |
| BseMII | CTCAG | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 188 |
| Bsp143I | GATC | 1 cut(s) | 226 |
| BspACI | CCGC | 2 cut(s) | 189, 238 |
| BspCNI | CTCAG | 1 cut(s) | 138 |
| BspLI | GGNNCC | 1 cut(s) | 105 |
| BspOI | GCTAGC | 1 cut(s) | 30 |
| BspTI | CTTAAG | 1 cut(s) | 241 |
| BssMI | GATC | 1 cut(s) | 226 |
| Bst2UI | CCWGG | 1 cut(s) | 18 |
| BstAFI | CTTAAG | 1 cut(s) | 241 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 146 |
| BstF5I | GGATG | 1 cut(s) | 178 |
| BstKTI | GATC | 1 cut(s) | 229 |
| BstMBI | GATC | 1 cut(s) | 226 |
| BstNI | CCWGG | 1 cut(s) | 18 |
| BstSCI | CCNGG | 1 cut(s) | 16 |
| BstV2I | GAAGAC | 1 cut(s) | 219 |
| BsuI | GTATCC | 1 cut(s) | 164 |
| BtsCI | GGATG | 1 cut(s) | 178 |
| BtsI | GCAGTG | 1 cut(s) | 214 |
| BtsIMutI | CAGTG | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| CviJI | RGCY | 3 cut(s) | 57, 84, 155 |
| CviKI_1 | RGCY | 3 cut(s) | 57, 84, 155 |
| DdeI | CTNAG | 1 cut(s) | 146 |
| DpnI | GATC | 1 cut(s) | 228 |
| DpnII | GATC | 1 cut(s) | 226 |
| Eco32I | GATATC | 1 cut(s) | 46 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoRII | CCWGG | 1 cut(s) | 16 |
| EcoRV | GATATC | 1 cut(s) | 46 |
| FaiI | YATR | 2 cut(s) | 72, 115 |
| FauI | CCCGC | 1 cut(s) | 245 |
| FokI | GGATG | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 27 |
| HinfI | GANTC | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 1 cut(s) | 43 |
| Hpy188III | TCNNGA | 1 cut(s) | 137 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 2 cut(s) | 65, 207 |
| HpyF3I | CTNAG | 1 cut(s) | 146 |
| Kzo9I | GATC | 1 cut(s) | 226 |
| LpnPI | CCDG | 4 cut(s) | 3, 30, 98, 122 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MalI | GATC | 1 cut(s) | 228 |
| MboI | GATC | 1 cut(s) | 226 |
| MboII | GAAGA | 4 cut(s) | 100, 170, 173, 224 |
| MluCI | AATT | 3 cut(s) | 21, 164, 198 |
| MlyI | GAGTC | 1 cut(s) | 157 |
| MmeI | TCCRAC | 1 cut(s) | 55 |
| MseI | TTAA | 1 cut(s) | 242 |
| MspCI | CTTAAG | 1 cut(s) | 241 |
| MspR9I | CCNGG | 1 cut(s) | 18 |
| MvaI | CCWGG | 1 cut(s) | 18 |
| NdeII | GATC | 1 cut(s) | 226 |
| NheI | GCTAGC | 1 cut(s) | 26 |
| NlaIV | GGNNCC | 1 cut(s) | 105 |
| PleI | GAGTC | 1 cut(s) | 156 |
| PpsI | GAGTC | 1 cut(s) | 156 |
| Psp6I | CCWGG | 1 cut(s) | 16 |
| PspGI | CCWGG | 1 cut(s) | 16 |
| PspN4I | GGNNCC | 1 cut(s) | 105 |
| SaqAI | TTAA | 1 cut(s) | 242 |
| Sau3AI | GATC | 1 cut(s) | 226 |
| SchI | GAGTC | 1 cut(s) | 157 |
| ScrFI | CCNGG | 1 cut(s) | 18 |
| SetI | ASST | 4 cut(s) | 19, 130, 157, 221 |
| SgeI | CNNG | 7 cut(s) | 29, 30, 39, 97, 149, 164, 216 |
| SmlI | CTYRAG | 1 cut(s) | 241 |
| SmoI | CTYRAG | 1 cut(s) | 241 |
| Sse9I | AATT | 3 cut(s) | 21, 164, 198 |
| SsiI | CCGC | 2 cut(s) | 189, 238 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 16 |
| TaqI | TCGA | 1 cut(s) | 10 |
| TasI | AATT | 3 cut(s) | 21, 164, 198 |
| Tru1I | TTAA | 1 cut(s) | 242 |
| Tru9I | TTAA | 1 cut(s) | 242 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TspDTI | ATGAA | 1 cut(s) | 211 |
| TspRI | CASTG | 1 cut(s) | 214 |
| Vha464I | CTTAAG | 1 cut(s) | 241 |
| XapI | RAATTY | 1 cut(s) | 164 |
| XspI | CTAG | 1 cut(s) | 27 |