RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| eIF3a_PCI_TPR-like | PF22591 | 8 - 407 | 1e-136 | eIF3a, PCI domain, TPR-like region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2653 |
| Acc16I | TGCGCA | 1 cut(s) | 182 |
| Acc36I | ACCTGC | 3 cut(s) | 579, 2653, 2809 |
| AccB1I | GGYRCC | 1 cut(s) | 2670 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1201 |
| AccII | CGCG | 2 cut(s) | 527, 2434 |
| AciI | CCGC | 7 cut(s) | 1332, 2386, 2474, 2749, 2756, 2814, 2851 |
| AclI | AACGTT | 1 cut(s) | 2122 |
| AclWI | GGATC | 3 cut(s) | 1414, 1852, 1865 |
| AcoI | YGGCCR | 1 cut(s) | 2701 |
| AcsI | RAATTY | 4 cut(s) | 7, 928, 1268, 1644 |
| AcuI | CTGAAG | 6 cut(s) | 63, 734, 1821, 1848, 2225, 2412 |
| AcvI | CACGTG | 1 cut(s) | 1010 |
| AdeI | CACNNNGTG | 1 cut(s) | 2810 |
| AfaI | GTAC | 4 cut(s) | 313, 1351, 1610, 2664 |
| AfeI | AGCGCT | 1 cut(s) | 339 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1201, 1507, 1622, 2260, 2651, 2704, 2807 |
| AflIII | ACRYGT | 1 cut(s) | 1007 |
| AhlI | ACTAGT | 1 cut(s) | 1636 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1931, 1963, 2553, 2585, 2815, 2847 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1196, 1228 |
| Alw21I | GWGCWC | 2 cut(s) | 168, 2629 |
| Alw26I | GTCTC | 6 cut(s) | 642, 1150, 1323, 1587, 2395, 2569 |
| AlwI | GGATC | 3 cut(s) | 1414, 1852, 1865 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2164, 2720 |
| Aor51HI | AGCGCT | 1 cut(s) | 339 |
| ApeKI | GCWGC | 4 cut(s) | 682, 709, 977, 2108 |
| ApoI | RAATTY | 4 cut(s) | 7, 928, 1268, 1644 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 686, 718 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 768, 2375 |
| AspLEI | GCGC | 7 cut(s) | 183, 340, 2190, 2434, 2481, 2778, 2796 |
| AspS9I | GGNCC | 6 cut(s) | 319, 1990, 2337, 2695, 2819, 2843 |
| AsuHPI | GGTGA | 3 cut(s) | 416, 1553, 1975 |
| AsuNHI | GCTAGC | 1 cut(s) | 863 |
| AvaII | GGWCC | 1 cut(s) | 2843 |
| BalI | TGGCCA | 1 cut(s) | 2703 |
| BamHI | GGATCC | 1 cut(s) | 1857 |
| BanI | GGYRCC | 1 cut(s) | 2670 |
| BanII | GRGCYC | 1 cut(s) | 168 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2124, 2156 |
| BbrPI | CACGTG | 1 cut(s) | 1010 |
| BbsI | GAAGAC | 2 cut(s) | 2751, 2823 |
| Bbv12I | GWGCWC | 2 cut(s) | 168, 2629 |
| BbvCI | CCTCAGC | 2 cut(s) | 1288, 2691 |
| BbvI | GCAGC | 4 cut(s) | 694, 721, 964, 2095 |
| BccI | CCATC | 8 cut(s) | 197, 811, 876, 1203, 1374, 1541, 1946, 2227 |
| BceAI | ACGGC | 1 cut(s) | 549 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 66, 100 |
| BciVI | GTATCC | 1 cut(s) | 1384 |
| BclI | TGATCA | 1 cut(s) | 51 |
| BcoDI | GTCTC | 6 cut(s) | 642, 1150, 1323, 1587, 2395, 2569 |
| BcuI | ACTAGT | 1 cut(s) | 1636 |
| BfaI | CTAG | 8 cut(s) | 485, 864, 1538, 1596, 1637, 1698, 2534, 2622 |
| BfoI | RGCGCY | 2 cut(s) | 341, 2191 |
| BfuAI | ACCTGC | 3 cut(s) | 579, 2653, 2809 |
| BfuI | GTATCC | 1 cut(s) | 1384 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 305 |
| BglII | AGATCT | 5 cut(s) | 379, 489, 846, 1186, 2200 |
| BisI | GCNGC | 4 cut(s) | 683, 710, 978, 2109 |
| BlpI | GCTNAGC | 2 cut(s) | 389, 2601 |
| BlsI | GCNGC | 4 cut(s) | 684, 711, 979, 2110 |
| Bme18I | GGWCC | 1 cut(s) | 2843 |
| BmgT120I | GGNCC | 6 cut(s) | 319, 1990, 2337, 2695, 2819, 2843 |
| BmiI | GGNNCC | 6 cut(s) | 1859, 2616, 2672, 2697, 2709, 2844 |
| BmtI | GCTAGC | 1 cut(s) | 867 |
| BpiI | GAAGAC | 2 cut(s) | 2751, 2823 |
| BpmI | CTGGAG | 2 cut(s) | 1223, 2697 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1288, 1994, 2006, 2691 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 389, 2601 |
| BpuEI | CTTGAG | 1 cut(s) | 514 |
| BsaAI | YACGTR | 1 cut(s) | 1010 |
| BsaI | GGTCTC | 3 cut(s) | 642, 1150, 2569 |
| BsaJI | CCNNGG | 8 cut(s) | 446, 1173, 2591, 2651, 2666, 2698, 2822, 2838 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1196, 1226, 1887, 1917, 1947, 1977, 2018, 2048 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1201, 1507, 1622, 2260, 2651, 2704, 2807 |
| Bse1I | ACTGG | 2 cut(s) | 550, 2496 |
| BseDI | CCNNGG | 8 cut(s) | 446, 1173, 2591, 2651, 2666, 2698, 2822, 2838 |
| BseGI | GGATG | 6 cut(s) | 809, 1468, 1957, 2235, 2362, 2500 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1201, 1507, 1622, 2260, 2651, 2704, 2807 |
| BseNI | ACTGG | 2 cut(s) | 550, 2496 |
| BseXI | GCAGC | 4 cut(s) | 694, 721, 964, 2095 |
| BsgI | GTGCAG | 3 cut(s) | 651, 963, 2787 |
| Bsh1236I | CGCG | 2 cut(s) | 527, 2434 |
| BshNI | GGYRCC | 1 cut(s) | 2670 |
| BsiHKAI | GWGCWC | 2 cut(s) | 168, 2629 |
| BsiSI | CCGG | 1 cut(s) | 20 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1201, 1507, 1622, 2260, 2651, 2704, 2807 |
| BsmAI | GTCTC | 6 cut(s) | 642, 1150, 1323, 1587, 2395, 2569 |
| BsmI | GAATGC | 1 cut(s) | 31 |
| Bso31I | GGTCTC | 3 cut(s) | 642, 1150, 2569 |
| Bsp1286I | GDGCHC | 2 cut(s) | 168, 2629 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 389, 2601 |
| BspACI | CCGC | 7 cut(s) | 1332, 2386, 2474, 2749, 2756, 2814, 2851 |
| BspFNI | CGCG | 2 cut(s) | 527, 2434 |
| BspHI | TCATGA | 2 cut(s) | 91, 2146 |
| BspLI | GGNNCC | 6 cut(s) | 1859, 2616, 2672, 2697, 2709, 2844 |
| BspMI | ACCTGC | 3 cut(s) | 579, 2653, 2809 |
| BspOI | GCTAGC | 1 cut(s) | 867 |
| BspPI | GGATC | 3 cut(s) | 1414, 1852, 1865 |
| BspQI | GCTCTTC | 2 cut(s) | 1134, 2127 |
| BspT107I | GGYRCC | 1 cut(s) | 2670 |
| BspTNI | GGTCTC | 3 cut(s) | 642, 1150, 2569 |
| BsrI | ACTGG | 2 cut(s) | 550, 2496 |
| BssECI | CCNNGG | 8 cut(s) | 446, 1173, 2591, 2651, 2666, 2698, 2822, 2838 |
| BssT1I | CCWWGG | 2 cut(s) | 2591, 2822 |
| Bst4CI | ACNGT | 6 cut(s) | 431, 481, 564, 738, 1317, 1669 |
| Bst6I | CTCTTC | 8 cut(s) | 39, 1134, 1761, 1811, 2079, 2127, 2388, 2415 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 277 |
| BstBAI | YACGTR | 1 cut(s) | 1010 |
| BstC8I | GCNNGC | 8 cut(s) | 39, 233, 306, 680, 865, 1824, 2598, 2619 |
| BstF5I | GGATG | 6 cut(s) | 809, 1468, 1957, 2235, 2362, 2500 |
| BstFNI | CGCG | 2 cut(s) | 527, 2434 |
| BstH2I | RGCGCY | 2 cut(s) | 341, 2191 |
| BstHHI | GCGC | 7 cut(s) | 183, 340, 2190, 2434, 2481, 2778, 2796 |
| BstMAI | GTCTC | 6 cut(s) | 642, 1150, 1323, 1587, 2395, 2569 |
| BstUI | CGCG | 2 cut(s) | 527, 2434 |
| BstV1I | GCAGC | 4 cut(s) | 694, 721, 964, 2095 |
| BstV2I | GAAGAC | 2 cut(s) | 2751, 2823 |
| BstX2I | RGATCY | 6 cut(s) | 379, 489, 846, 1186, 1857, 2200 |
| BstYI | RGATCY | 6 cut(s) | 379, 489, 846, 1186, 1857, 2200 |
| BsuI | GTATCC | 1 cut(s) | 1384 |
| BtgZI | GCGATG | 2 cut(s) | 542, 2802 |
| BtsCI | GGATG | 6 cut(s) | 809, 1468, 1957, 2235, 2362, 2500 |
| BtsI | GCAGTG | 2 cut(s) | 905, 2785 |
| BtsIMutI | CAGTG | 4 cut(s) | 406, 486, 905, 2785 |
| BveI | ACCTGC | 3 cut(s) | 579, 2653, 2809 |
| Cac8I | GCNNGC | 8 cut(s) | 39, 233, 306, 680, 865, 1824, 2598, 2619 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2164, 2720 |
| CciI | TCATGA | 2 cut(s) | 91, 2146 |
| CfoI | GCGC | 7 cut(s) | 183, 340, 2190, 2434, 2481, 2778, 2796 |
| Cfr13I | GGNCC | 6 cut(s) | 319, 1990, 2337, 2695, 2819, 2843 |
| CseI | GACGC | 1 cut(s) | 2170 |
| Csp6I | GTAC | 4 cut(s) | 312, 1350, 1609, 2663 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 712, 747 |
| CviQI | GTAC | 4 cut(s) | 312, 1350, 1609, 2663 |
| DraI | TTTAAA | 2 cut(s) | 154, 933 |
| DraIII | CACNNNGTG | 1 cut(s) | 2810 |
| EaeI | YGGCCR | 1 cut(s) | 2701 |
| Eam1104I | CTCTTC | 8 cut(s) | 39, 1134, 1761, 1811, 2079, 2127, 2388, 2415 |
| EarI | CTCTTC | 8 cut(s) | 39, 1134, 1761, 1811, 2079, 2127, 2388, 2415 |
| Ecl136II | GAGCTC | 1 cut(s) | 166 |
| Eco130I | CCWWGG | 2 cut(s) | 2591, 2822 |
| Eco147I | AGGCCT | 1 cut(s) | 2596 |
| Eco24I | GRGCYC | 1 cut(s) | 168 |
| Eco31I | GGTCTC | 3 cut(s) | 642, 1150, 2569 |
| Eco47I | GGWCC | 1 cut(s) | 2843 |
| Eco47III | AGCGCT | 1 cut(s) | 339 |
| Eco53kI | GAGCTC | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 6 cut(s) | 63, 734, 1821, 1848, 2225, 2412 |
| Eco72I | CACGTG | 1 cut(s) | 1010 |
| EcoICRI | GAGCTC | 1 cut(s) | 166 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2695 |
| EcoT14I | CCWWGG | 2 cut(s) | 2591, 2822 |
| EcoT22I | ATGCAT | 4 cut(s) | 31, 79, 282, 889 |
| EcoT38I | GRGCYC | 1 cut(s) | 168 |
| ErhI | CCWWGG | 2 cut(s) | 2591, 2822 |
| FauI | CCCGC | 1 cut(s) | 1339 |
| FauNDI | CATATG | 1 cut(s) | 1503 |
| FbaI | TGATCA | 1 cut(s) | 51 |
| Fnu4HI | GCNGC | 4 cut(s) | 683, 710, 978, 2109 |
| FokI | GGATG | 6 cut(s) | 796, 1475, 1964, 2242, 2369, 2507 |
| FriOI | GRGCYC | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 4 cut(s) | 683, 710, 978, 2109 |
| FspBI | CTAG | 8 cut(s) | 485, 864, 1538, 1596, 1637, 1698, 2534, 2622 |
| FspI | TGCGCA | 1 cut(s) | 182 |
| GlaI | GCGC | 7 cut(s) | 182, 339, 2189, 2433, 2480, 2777, 2795 |
| GluI | GCNGC | 4 cut(s) | 683, 710, 978, 2109 |
| GsuI | CTGGAG | 2 cut(s) | 1223, 2697 |
| HaeII | RGCGCY | 2 cut(s) | 341, 2191 |
| HapII | CCGG | 1 cut(s) | 20 |
| HgaI | GACGC | 1 cut(s) | 2170 |
| HhaI | GCGC | 7 cut(s) | 183, 340, 2190, 2434, 2481, 2778, 2796 |
| Hin6I | GCGC | 7 cut(s) | 181, 338, 2188, 2432, 2479, 2776, 2794 |
| HinP1I | GCGC | 7 cut(s) | 181, 338, 2188, 2432, 2479, 2776, 2794 |
| HincII | GTYRAC | 5 cut(s) | 175, 1099, 1254, 1498, 1742 |
| HindII | GTYRAC | 5 cut(s) | 175, 1099, 1254, 1498, 1742 |
| HindIII | AAGCTT | 3 cut(s) | 916, 1343, 2411 |
| HpaII | CCGG | 1 cut(s) | 20 |
| HphI | GGTGA | 3 cut(s) | 416, 1553, 1975 |
| Hpy166II | GTNNAC | 7 cut(s) | 175, 903, 1099, 1254, 1498, 1742, 2156 |
| Hpy8I | GTNNAC | 7 cut(s) | 175, 903, 1099, 1254, 1498, 1742, 2156 |
| Hpy99I | CGWCG | 1 cut(s) | 580 |
| HpyCH4III | ACNGT | 6 cut(s) | 431, 481, 564, 738, 1317, 1669 |
| HpyCH4IV | ACGT | 5 cut(s) | 1009, 1738, 1759, 2122, 2152 |
| HpySE526I | ACGT | 5 cut(s) | 1009, 1738, 1759, 2122, 2152 |
| HspAI | GCGC | 7 cut(s) | 181, 338, 2188, 2432, 2479, 2776, 2794 |
| Ksp22I | TGATCA | 1 cut(s) | 51 |
| LguI | GCTCTTC | 2 cut(s) | 1134, 2127 |
| Lsp1109I | GCAGC | 4 cut(s) | 694, 721, 964, 2095 |
| MaeI | CTAG | 8 cut(s) | 485, 864, 1538, 1596, 1637, 1698, 2534, 2622 |
| MaeII | ACGT | 5 cut(s) | 1009, 1738, 1759, 2122, 2152 |
| MaeIII | GTNAC | 6 cut(s) | 439, 1526, 1963, 2034, 2139, 2780 |
| MfeI | CAATTG | 1 cut(s) | 950 |
| MflI | RGATCY | 6 cut(s) | 379, 489, 846, 1186, 1857, 2200 |
| MhlI | GDGCHC | 2 cut(s) | 168, 2629 |
| MlsI | TGGCCA | 1 cut(s) | 2703 |
| MluCI | AATT | 9 cut(s) | 7, 836, 928, 950, 1051, 1139, 1268, 1644, 1884 |
| MluNI | TGGCCA | 1 cut(s) | 2703 |
| MlyI | GAGTC | 4 cut(s) | 1589, 1637, 1778, 2096 |
| MmeI | TCCRAC | 2 cut(s) | 234, 492 |
| Mox20I | TGGCCA | 1 cut(s) | 2703 |
| Mph1103I | ATGCAT | 4 cut(s) | 31, 79, 282, 889 |
| MroXI | GAANNNNTTC | 2 cut(s) | 768, 2375 |
| MscI | TGGCCA | 1 cut(s) | 2703 |
| MseI | TTAA | 9 cut(s) | 153, 240, 873, 921, 932, 1080, 1470, 1620, 1979 |
| MslI | CAYNNNNRTG | 3 cut(s) | 882, 1487, 2151 |
| Msp20I | TGGCCA | 1 cut(s) | 2703 |
| MspA1I | CMGCKG | 3 cut(s) | 685, 712, 2853 |
| MspI | CCGG | 1 cut(s) | 20 |
| MunI | CAATTG | 1 cut(s) | 950 |
| Mva1269I | GAATGC | 1 cut(s) | 31 |
| MvnI | CGCG | 2 cut(s) | 527, 2434 |
| NdeI | CATATG | 1 cut(s) | 1503 |
| NheI | GCTAGC | 1 cut(s) | 863 |
| NlaIV | GGNNCC | 6 cut(s) | 1859, 2616, 2672, 2697, 2709, 2844 |
| NmeAIII | GCCGAG | 3 cut(s) | 325, 1603, 2608 |
| NmuCI | GTSAC | 2 cut(s) | 1963, 2780 |
| NsbI | TGCGCA | 1 cut(s) | 182 |
| NsiI | ATGCAT | 4 cut(s) | 31, 79, 282, 889 |
| PagI | TCATGA | 2 cut(s) | 91, 2146 |
| PaqCI | CACCTGC | 1 cut(s) | 2653 |
| PceI | AGGCCT | 1 cut(s) | 2596 |
| PciSI | GCTCTTC | 2 cut(s) | 1134, 2127 |
| PctI | GAATGC | 1 cut(s) | 31 |
| PdmI | GAANNNNTTC | 2 cut(s) | 768, 2375 |
| PfeI | GAWTC | 6 cut(s) | 192, 610, 1541, 1849, 2587, 2733 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1201 |
| PfoI | TCCNGGA | 2 cut(s) | 1200, 2253 |
| PkrI | GCNGC | 4 cut(s) | 684, 711, 979, 2110 |
| PleI | GAGTC | 4 cut(s) | 1588, 1636, 1777, 2095 |
| PmaCI | CACGTG | 1 cut(s) | 1010 |
| PmlI | CACGTG | 1 cut(s) | 1010 |
| PpsI | GAGTC | 4 cut(s) | 1588, 1636, 1777, 2095 |
| Ppu21I | YACGTR | 1 cut(s) | 1010 |
| Psp124BI | GAGCTC | 1 cut(s) | 168 |
| Psp1406I | AACGTT | 1 cut(s) | 2122 |
| PspCI | CACGTG | 1 cut(s) | 1010 |
| PspN4I | GGNNCC | 6 cut(s) | 1859, 2616, 2672, 2697, 2709, 2844 |
| PspPI | GGNCC | 6 cut(s) | 319, 1990, 2337, 2695, 2819, 2843 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2164, 2720 |
| PsuI | RGATCY | 6 cut(s) | 379, 489, 846, 1186, 1857, 2200 |
| PvuII | CAGCTG | 2 cut(s) | 685, 712 |
| RsaI | GTAC | 4 cut(s) | 313, 1351, 1610, 2664 |
| RsaNI | GTAC | 4 cut(s) | 312, 1350, 1609, 2663 |
| RseI | CAYNNNNRTG | 3 cut(s) | 882, 1487, 2151 |
| SacI | GAGCTC | 1 cut(s) | 168 |
| SapI | GCTCTTC | 2 cut(s) | 1134, 2127 |
| SaqAI | TTAA | 9 cut(s) | 153, 240, 873, 921, 932, 1080, 1470, 1620, 1979 |
| SatI | GCNGC | 4 cut(s) | 683, 710, 978, 2109 |
| Sau96I | GGNCC | 6 cut(s) | 319, 1990, 2337, 2695, 2819, 2843 |
| SchI | GAGTC | 4 cut(s) | 1589, 1637, 1778, 2096 |
| SduI | GDGCHC | 2 cut(s) | 168, 2629 |
| SinI | GGWCC | 1 cut(s) | 2843 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 882, 1487, 2151 |
| SmlI | CTYRAG | 1 cut(s) | 493 |
| SmoI | CTYRAG | 1 cut(s) | 493 |
| SpeI | ACTAGT | 1 cut(s) | 1636 |
| Sse9I | AATT | 9 cut(s) | 7, 836, 928, 950, 1051, 1139, 1268, 1644, 1884 |
| SseBI | AGGCCT | 1 cut(s) | 2596 |
| SsiI | CCGC | 7 cut(s) | 1332, 2386, 2474, 2749, 2756, 2814, 2851 |
| SspMI | CTAG | 8 cut(s) | 485, 864, 1538, 1596, 1637, 1698, 2534, 2622 |
| SstI | GAGCTC | 1 cut(s) | 168 |
| StuI | AGGCCT | 1 cut(s) | 2596 |
| StyI | CCWWGG | 2 cut(s) | 2591, 2822 |
| TaaI | ACNGT | 6 cut(s) | 431, 481, 564, 738, 1317, 1669 |
| TaiI | ACGT | 5 cut(s) | 1012, 1741, 1762, 2125, 2155 |
| TaqI | TCGA | 6 cut(s) | 506, 541, 1148, 1265, 1555, 1713 |
| TaqII | GACCGA | 2 cut(s) | 666, 2739 |
| TasI | AATT | 9 cut(s) | 7, 836, 928, 950, 1051, 1139, 1268, 1644, 1884 |
| TfiI | GAWTC | 6 cut(s) | 192, 610, 1541, 1849, 2587, 2733 |
| Tru1I | TTAA | 9 cut(s) | 153, 240, 873, 921, 932, 1080, 1470, 1620, 1979 |
| Tru9I | TTAA | 9 cut(s) | 153, 240, 873, 921, 932, 1080, 1470, 1620, 1979 |
| TscAI | CASTG | 4 cut(s) | 406, 486, 912, 2785 |
| TseFI | GTSAC | 2 cut(s) | 1963, 2780 |
| TseI | GCWGC | 4 cut(s) | 682, 709, 977, 2108 |
| Tsp45I | GTSAC | 2 cut(s) | 1963, 2780 |
| TspGWI | ACGGA | 4 cut(s) | 593, 743, 2242, 2627 |
| TspRI | CASTG | 4 cut(s) | 406, 486, 912, 2785 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1201 |
| VpaK11BI | GGWCC | 1 cut(s) | 2843 |
| XapI | RAATTY | 4 cut(s) | 7, 928, 1268, 1644 |
| XbaI | TCTAGA | 1 cut(s) | 1537 |
| XmnI | GAANNNNTTC | 2 cut(s) | 768, 2375 |
| XspI | CTAG | 8 cut(s) | 485, 864, 1538, 1596, 1637, 1698, 2534, 2622 |
| Zsp2I | ATGCAT | 4 cut(s) | 31, 79, 282, 889 |