Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001063

Physical Location & Seq

Genomic Coordinates Forward (+)

20429205 .. 20433658

Gene Structure 4454 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48288

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGCCTCCTCCCTCGACCACAACCACACCCTGAACGGCGATTCCAACACCCAGCAATGGCCTCCTCCCCCGGCCATTATCGGACTCGGAGCCTCCAACTCCACTCCCCGGGTCGGGTTCTTCCGCCACTCCAACCCCAAACTCGGCGAGCAGCTCCTCTACTTCATCCTCTCTTCCCTCCGTGGCCCAATTCAATCTGCCAAGTTGATCAATGTTGGGCAGAAGCAAGATGCATTGCAATCGCTTCATGATCTTATTACATCAAAGAGATATAGAGCATGGCAGAAGCCACTTGAAAAAATTATGTTTAAATATGTGGAGCTTTGTGTTGACTTGCGCAAGGGTAGATTTGCCAAGGATGGTCTGATTCAGTACCGTATTATATGTCAACAAGTAAATGTCAGTTCCTTGGAAGAGGTGATCAAGCACTTCATGCATCTGTCAACTGAGAAAGCTGAGCAGGCACGTACCCAGGCTCAAGCATTAGAAGAAGCACTTGATGTTGATGACCTCAAAGCAGATAAGAGGCCTGAAGATCTAATGCTGAGTTATGTCAGTGGAGAGAAAGGAAAAGATAGGTCTGATCGTGAAGTTGTTACTCCTTGGTTCAAGTTTTTGTGGGAAACCTACAGAACAGTGCTTGAGATCTTGCGCAACAACTCAAAGTTGGAGGCCCTTTATGCGACACGTGCTGCCTCTCACTTGGAACTTGAAAATGAGAAAGAGCGCAATTTGAGGATGGCTAATCTAATTGGCTTTAATCTTGACCCCAAAATCGACAGAGGAGATGTGATTCAACTTATAATTGTTCCCCAAACTGATAATGTGCTTTATGGCCAGCTTTCAAGATTTGCTCTTCTATCAGAACTGGTCTCCAAAGGTGTCTTGAGCTGTGCAACCCAGGAAGTAAAGGATCTCTTCCATCTCCTGGAGCATGAATTTCTACCTCTCGACCTTGCTGTAAAGATACAACCACTGTTGACTAAAATCTCAAAATTTGGGGGTAAGCTGGCTTCAGCTTCTTCTGTTCCTGAAGTGCAACTGTCTCAATATGTTCCTGCACTTGAAAAGCTTGGTACTTTGAGGTTGCTCCAGCAGGTGTCTCGGGTGTATCAGTCGATGAAGATTGAACATTTATCTCGGATGATCCCATTTTATGACTTTTCTGTTGTAGAGAAGATATATGTGGATGCTGTTAAACATAACTTCATAGCTATGAAAGTCGACCATATGAAGGGTGTTATGATGTTTGGTAACTTGATATGTTTACAATTTGAATCTGGAACTTTCATCCCAATGTGGTCAAATTTGGCTCATGAAATGACAGCAGAGTTTCGTGGTCTGTGTGCTGAAGAGGCTTATTTGCAGCAAGAGCTGGAAAAATTACATGATCTTAGGAACAAAGTCAAGTTGGAAGGGGAACATTGGGATGACCTTGTATCTAGTTCGAGTCAGAATTCTCATTTAGTATCCAAGGCTACTCGTTTGTGGGAGTCGATATTAGCCAGTAAAACTATGGATCAGAGCTCTCAGGTTCCTTATGCAGATGTCTTATCTGTCCAGTCTGGTGATTTTACTCCTACACATGTTGATGATAAAGAGCAGAGTGATGGTTCATATGTCAATATTAACAGAGAAAAGATGAAGAATAATTTAGATTCATCCCATTCACAAGTAAATGATGAAACTCTTCATCGAGCAGATGAGAGAAGTGGAAGAGTCCACCCAACTGTTGACGTGGCAGAAATTATCAGGCGTTGGACACATACTTTACAGCGTATTCATAAACAGTCACTTCATATGGCAAAAGCTAATGAGGGAGAGGGTCCAGAAATTCTAAGAAGTGCGCATGAAGGCAGTTCAAGTGGTCATGCCGAGTCATTAGCTGCAACACTAGCTGAACATCAGCAGCACTTGGTTAGCTTTCAGGTTCTCATTAATCAACTAAAGGAAGTTGCTCCAGCAATACAAAAGTCAATATCAGAATGGACAGATAAAGTAGATAGCATTTCCTCTAATCTGCCTCCAATGATTAAGCATCCTGGCCAGATGGAGAAGGTAACAATCAAGGCACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001732 GO:0002181 GO:0002183 GO:0002188 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005852 GO:0005886 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0043614 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0071540 GO:0071541 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PCI

Protein Analysis

692

Amino Acids

78.37

Weight (kDa)

6.41

Isoelectric Point (pI)

38.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF3a_PCI_TPR-like	PF22591	67 - 240	5e-58	eIF3a, PCI domain, TPR-like region
PCI	PF01399	347 - 417	2.3e-06	PCI domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11420
fragaria_vesca	FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021
malus_domestica	MD04G1196800.v1.1 MD12G1209700.v1.1
prunus_persica	Prupe.6G317100_v2.0.a1 Prupe.6G317100_v2.0.a1
pyrus_communis	pycom04g17400 pycom12g19700
rosa_chinensis	RchiOBHm_Chr2g0109021 RchiOBHm_Chr3g0456551 RchiOBHm_Chr5g0047251 RchiOBHm_Chr6g0248701
rosa_laevigata	RLG00000025294 RLG00000028631
rosa_multiflora	Rmu_sc0000361.1_g000030 Rmu_sc0000670.1_g000004 Rmu_sc0000955.1_g000029 Rmu_sc0002045.1_g000025 Rmu_sc0002607.1_g000004 Rmu_sc0005473.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037410 Rroxscaffold_2G00104310 Rroxscaffold_3G00230480 Rroxscaffold_3G00256140 Rroxscaffold_6G00422630
rosa_rugosa	Rorug03G0013900 Rorug04G0204200
rosa_samantha	Rh1BG180500 Rh1DG210500 Rh2CG210900 Rh2DG107300 Rh2DG455500 Rh3AG074600 Rh3AG217800 Rh3BG076300 Rh3CG076000 Rh3DG078100 Rh4AG261300 Rh4BG267100 Rh4DG188600 Rh4DG191400 Rh4DG263400 Rh5BG322700 Rh5BG536200 Rh5BG542500 Rh5CG559400 Rh5CG565100 Rh5DG333700 Rh5DG412500 Rh6AG116300 Rh6BG110500 Rh6CG264500
rosa_wichuraiana	Rw3G006380 Rw5G047630 Rw6G003410 Rw6G025160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	803
AarI	CACCTGC	1 cut(s)	1087
Acc16I	TGCGCA	3 cut(s)	338, 653, 1848
Acc36I	ACCTGC	1 cut(s)	1087
AccB7I	CCANNNNNTGG	1 cut(s)	928
AccI	GTMKAC	1 cut(s)	1224
AciI	CCGC	1 cut(s)	124
AclWI	GGATC	3 cut(s)	921, 1141, 1527
AcoI	YGGCCR	3 cut(s)	72, 835, 2044
AcsI	RAATTY	5 cut(s)	938, 995, 1306, 1456, 1833
AcuI	CTGAAG	4 cut(s)	552, 999, 1053, 1371
AcvI	CACGTG	1 cut(s)	689
AfaI	GTAC	3 cut(s)	374, 469, 1078
AfiI	CCNNNNNNNGG	7 cut(s)	57, 108, 113, 114, 143, 928, 1234
AflIII	ACRYGT	2 cut(s)	686, 1585
AjiI	CACGTC	1 cut(s)	1738
AjnI	CCWGG	4 cut(s)	471, 900, 927, 2041
AloI	GAACNNNNNNTCC	2 cut(s)	26, 58
Alw21I	GWGCWC	1 cut(s)	1529
Alw26I	GTCTC	3 cut(s)	877, 1050, 1107
AlwI	GGATC	3 cut(s)	921, 1141, 1527
Ama87I	CYCGRG	2 cut(s)	108, 1104
AoxI	GGCC	8 cut(s)	3, 59, 72, 184, 527, 672, 835, 2044
ApeKI	GCWGC	5 cut(s)	151, 692, 1366, 1886, 1909
ApoI	RAATTY	5 cut(s)	938, 995, 1306, 1456, 1833
AseI	ATTAAT	1 cut(s)	1938
Asp700I	GAANNNNTTC	1 cut(s)	1689
AspLEI	GCGC	4 cut(s)	339, 654, 729, 1849
AspS9I	GGNCC	3 cut(s)	185, 673, 1826
AsuC2I	CCSGG	3 cut(s)	71, 109, 110
AsuHPI	GGTGA	2 cut(s)	430, 1580
AvaI	CYCGRG	2 cut(s)	108, 1104
AvaII	GGWCC	1 cut(s)	1826
BalI	TGGCCA	2 cut(s)	837, 2046
BanII	GRGCYC	1 cut(s)	1529
BarI	GAAGNNNNNNTAC	2 cut(s)	997, 1029
BbrPI	CACGTG	1 cut(s)	689
Bbv12I	GWGCWC	1 cut(s)	1529
BbvI	GCAGC	5 cut(s)	163, 679, 1378, 1873, 1921
BccI	CCATC	5 cut(s)	353, 733, 930, 1604, 2044
BceAI	ACGGC	1 cut(s)	52
BcgI	CGANNNNNNTGC	4 cut(s)	222, 256, 1085, 1119
BciT130I	CCWGG	4 cut(s)	473, 902, 929, 2043
BciVI	GTATCC	1 cut(s)	1480
BclI	TGATCA	2 cut(s)	207, 420
BcnI	CCSGG	3 cut(s)	71, 109, 110
BcoDI	GTCTC	3 cut(s)	877, 1050, 1107
BfaI	CTAG	2 cut(s)	1443, 1895
BfmI	CTRYAG	1 cut(s)	628
BfuAI	ACCTGC	1 cut(s)	1087
BfuI	GTATCC	1 cut(s)	1480
BglII	AGATCT	2 cut(s)	535, 645
BisI	GCNGC	5 cut(s)	152, 693, 1367, 1887, 1910
BlpI	GCTNAGC	1 cut(s)	456
BlsI	GCNGC	5 cut(s)	153, 694, 1368, 1888, 1911
Bme1390I	CCNGG	7 cut(s)	71, 109, 110, 473, 902, 929, 2043
Bme18I	GGWCC	1 cut(s)	1826
BmeT110I	CYCGRG	2 cut(s)	108, 1104
BmgBI	CACGTC	1 cut(s)	1738
BmgT120I	GGNCC	3 cut(s)	185, 673, 1826
BmiI	GGNNCC	3 cut(s)	91, 1536, 1827
BmrFI	CCNGG	7 cut(s)	71, 109, 110, 473, 902, 929, 2043
BmsI	GCATC	4 cut(s)	220, 445, 1180, 2047
BpmI	CTGGAG	3 cut(s)	950, 1076, 1944
Bpu1102I	GCTNAGC	1 cut(s)	456
BpuEI	CTTGAG	3 cut(s)	462, 662, 907
BpuMI	CCSGG	3 cut(s)	71, 109, 110
BsaAI	YACGTR	2 cut(s)	467, 689
BsaI	GGTCTC	1 cut(s)	877
Bsc4I	CCNNNNNNNGG	7 cut(s)	57, 108, 113, 114, 143, 928, 1234
Bse1I	ACTGG	3 cut(s)	873, 1506, 1561
Bse3DI	GCAATG	2 cut(s)	62, 233
BseBI	CCWGG	4 cut(s)	473, 902, 929, 2043
BseGI	GGATG	9 cut(s)	165, 364, 744, 1149, 1195, 1290, 1435, 1661, 2038
BseLI	CCNNNNNNNGG	7 cut(s)	57, 108, 113, 114, 143, 928, 1234
BseMI	GCAATG	2 cut(s)	62, 233
BseMII	CTCAG	4 cut(s)	438, 447, 536, 1544
BseNI	ACTGG	3 cut(s)	873, 1506, 1561
BseRI	GAGGAG	3 cut(s)	54, 146, 798
BseXI	GCAGC	5 cut(s)	163, 679, 1378, 1873, 1921
BseYI	CCCAGC	1 cut(s)	51
BsgI	GTGCAG	1 cut(s)	1044
BshFI	GGCC	8 cut(s)	5, 61, 74, 186, 529, 674, 837, 2046
BsiHKAI	GWGCWC	1 cut(s)	1529
BsiHKCI	CYCGRG	2 cut(s)	108, 1104
BsiSI	CCGG	2 cut(s)	71, 109
BslI	CCNNNNNNNGG	7 cut(s)	57, 108, 113, 114, 143, 928, 1234
BsmAI	GTCTC	3 cut(s)	877, 1050, 1107
BsnI	GGCC	8 cut(s)	5, 61, 74, 186, 529, 674, 837, 2046
Bso31I	GGTCTC	1 cut(s)	877
BsoBI	CYCGRG	2 cut(s)	108, 1104
Bsp1286I	GDGCHC	1 cut(s)	1529
Bsp1720I	GCTNAGC	1 cut(s)	456
BspACI	CCGC	1 cut(s)	124
BspANI	GGCC	8 cut(s)	5, 61, 74, 186, 529, 674, 837, 2046
BspCNI	CTCAG	4 cut(s)	439, 448, 537, 1543
BspHI	TCATGA	2 cut(s)	247, 1315
BspLI	GGNNCC	3 cut(s)	91, 1536, 1827
BspMI	ACCTGC	1 cut(s)	1087
BspPI	GGATC	3 cut(s)	921, 1141, 1527
BspQI	GCTCTTC	1 cut(s)	861
BspTNI	GGTCTC	1 cut(s)	877
BsrDI	GCAATG	2 cut(s)	62, 233
BsrI	ACTGG	3 cut(s)	873, 1506, 1561
BssT1I	CCWWGG	4 cut(s)	354, 408, 602, 1473
Bst2UI	CCWGG	4 cut(s)	473, 902, 929, 2043
Bst4CI	ACNGT	6 cut(s)	377, 637, 978, 1044, 1732, 1791
Bst6I	CTCTTC	7 cut(s)	178, 408, 861, 923, 1347, 1695, 1711
BstAPI	GCANNNNNTGC	1 cut(s)	433
BstBAI	YACGTR	2 cut(s)	467, 689
BstC8I	GCNNGC	4 cut(s)	149, 462, 839, 1011
BstDEI	CTNAG	6 cut(s)	447, 456, 545, 1394, 1530, 1838
BstDSI	CCRYGG	1 cut(s)	181
BstF5I	GGATG	9 cut(s)	165, 364, 744, 1149, 1195, 1290, 1435, 1661, 2038
BstHHI	GCGC	4 cut(s)	339, 654, 729, 1849
BstMAI	GTCTC	3 cut(s)	877, 1050, 1107
BstMWI	GCNNNNNNNGC	7 cut(s)	433, 461, 680, 689, 1355, 1372, 1895
BstNI	CCWGG	4 cut(s)	473, 902, 929, 2043
BstNSI	RCATGY	1 cut(s)	1589
BstSCI	CCNGG	7 cut(s)	69, 107, 108, 471, 900, 927, 2041
BstSFI	CTRYAG	1 cut(s)	628
BstV1I	GCAGC	5 cut(s)	163, 679, 1378, 1873, 1921
BstX2I	RGATCY	3 cut(s)	535, 645, 913
BstYI	RGATCY	3 cut(s)	535, 645, 913
BsuI	GTATCC	1 cut(s)	1480
BsuRI	GGCC	8 cut(s)	5, 61, 74, 186, 529, 674, 837, 2046
BtgI	CCRYGG	1 cut(s)	181
BtrI	CACGTC	1 cut(s)	1738
BtsCI	GGATG	9 cut(s)	165, 364, 744, 1149, 1195, 1290, 1435, 1661, 2038
BtsIMutI	CAGTG	3 cut(s)	562, 642, 974
BveI	ACCTGC	1 cut(s)	1087
Cac8I	GCNNGC	4 cut(s)	149, 462, 839, 1011
CciI	TCATGA	2 cut(s)	247, 1315
CfoI	GCGC	4 cut(s)	339, 654, 729, 1849
Cfr13I	GGNCC	3 cut(s)	185, 673, 1826
Cfr9I	CCCGGG	1 cut(s)	108
Csp6I	GTAC	3 cut(s)	373, 468, 1077
CviAII	CATG	9 cut(s)	248, 279, 433, 935, 1316, 1388, 1586, 1850, 1871
CviQI	GTAC	3 cut(s)	373, 468, 1077
DdeI	CTNAG	6 cut(s)	447, 456, 545, 1394, 1530, 1838
DraI	TTTAAA	1 cut(s)	310
EaeI	YGGCCR	3 cut(s)	72, 835, 2044
Eam1104I	CTCTTC	7 cut(s)	178, 408, 861, 923, 1347, 1695, 1711
EarI	CTCTTC	7 cut(s)	178, 408, 861, 923, 1347, 1695, 1711
EciI	GGCGGA	1 cut(s)	113
Ecl136II	GAGCTC	1 cut(s)	1527
Eco130I	CCWWGG	4 cut(s)	354, 408, 602, 1473
Eco147I	AGGCCT	1 cut(s)	529
Eco24I	GRGCYC	1 cut(s)	1529
Eco31I	GGTCTC	1 cut(s)	877
Eco47I	GGWCC	1 cut(s)	1826
Eco53kI	GAGCTC	1 cut(s)	1527
Eco57I	CTGAAG	4 cut(s)	552, 999, 1053, 1371
Eco72I	CACGTG	1 cut(s)	689
Eco88I	CYCGRG	2 cut(s)	108, 1104
EcoICRI	GAGCTC	1 cut(s)	1527
EcoO109I	RGGNCCY	1 cut(s)	673
EcoRI	GAATTC	1 cut(s)	1456
EcoRII	CCWGG	4 cut(s)	471, 900, 927, 2041
EcoT14I	CCWWGG	4 cut(s)	354, 408, 602, 1473
EcoT22I	ATGCAT	2 cut(s)	235, 438
EcoT38I	GRGCYC	1 cut(s)	1529
ErhI	CCWWGG	4 cut(s)	354, 408, 602, 1473
FaeI	CATG	9 cut(s)	251, 282, 436, 938, 1319, 1391, 1589, 1853, 1874
FalI	AAGNNNNNCTT	4 cut(s)	480, 512, 902, 934
FatI	CATG	9 cut(s)	247, 278, 432, 934, 1315, 1387, 1585, 1849, 1870
FauNDI	CATATG	3 cut(s)	1230, 1618, 1800
FbaI	TGATCA	2 cut(s)	207, 420
FblI	GTMKAC	1 cut(s)	1224
Fnu4HI	GCNGC	5 cut(s)	152, 693, 1367, 1887, 1910
FokI	GGATG	9 cut(s)	152, 371, 751, 1156, 1202, 1277, 1442, 1648, 2025
FriOI	GRGCYC	1 cut(s)	1529
Fsp4HI	GCNGC	5 cut(s)	152, 693, 1367, 1887, 1910
FspAI	RTGCGCAY	1 cut(s)	1848
FspBI	CTAG	2 cut(s)	1443, 1895
FspI	TGCGCA	3 cut(s)	338, 653, 1848
GlaI	GCGC	4 cut(s)	338, 653, 728, 1848
GluI	GCNGC	5 cut(s)	152, 693, 1367, 1887, 1910
GsaI	CCCAGC	1 cut(s)	55
GsuI	CTGGAG	3 cut(s)	950, 1076, 1944
HaeIII	GGCC	8 cut(s)	5, 61, 74, 186, 529, 674, 837, 2046
HapII	CCGG	2 cut(s)	71, 109
HhaI	GCGC	4 cut(s)	339, 654, 729, 1849
Hin1II	CATG	9 cut(s)	251, 282, 436, 938, 1319, 1391, 1589, 1853, 1874
Hin6I	GCGC	4 cut(s)	337, 652, 727, 1847
HinP1I	GCGC	4 cut(s)	337, 652, 727, 1847
HincII	GTYRAC	6 cut(s)	331, 389, 444, 981, 1225, 1735
HindII	GTYRAC	6 cut(s)	331, 389, 444, 981, 1225, 1735
HindIII	AAGCTT	1 cut(s)	1070
HpaII	CCGG	2 cut(s)	71, 109
HphI	GGTGA	2 cut(s)	430, 1580
Hpy166II	GTNNAC	8 cut(s)	331, 389, 444, 981, 1225, 1268, 1723, 1735
Hpy188I	TCNGA	9 cut(s)	83, 89, 366, 583, 865, 1143, 1455, 1524, 1984
Hpy8I	GTNNAC	8 cut(s)	331, 389, 444, 981, 1225, 1268, 1723, 1735
HpyAV	CCTTC	4 cut(s)	1228, 1409, 1847, 2050
HpyCH4III	ACNGT	6 cut(s)	377, 637, 978, 1044, 1732, 1791
HpyCH4IV	ACGT	3 cut(s)	466, 688, 1737
HpyCH4V	TGCA	9 cut(s)	233, 238, 436, 896, 1039, 1061, 1366, 1544, 1889
HpyF10VI	GCNNNNNNNGC	7 cut(s)	433, 461, 680, 689, 1355, 1372, 1895
HpyF3I	CTNAG	6 cut(s)	447, 456, 545, 1394, 1530, 1838
HpySE526I	ACGT	3 cut(s)	466, 688, 1737
Hsp92II	CATG	9 cut(s)	251, 282, 436, 938, 1319, 1391, 1589, 1853, 1874
HspAI	GCGC	4 cut(s)	337, 652, 727, 1847
Ksp22I	TGATCA	2 cut(s)	207, 420
LguI	GCTCTTC	1 cut(s)	861
LmnI	GCTCC	6 cut(s)	89, 159, 319, 931, 1095, 1963
Lsp1109I	GCAGC	5 cut(s)	163, 679, 1378, 1873, 1921
LweI	GCATC	4 cut(s)	220, 445, 1180, 2047
MaeI	CTAG	2 cut(s)	1443, 1895
MaeII	ACGT	3 cut(s)	466, 688, 1737
MaeIII	GTNAC	4 cut(s)	595, 1253, 1791, 2059
MflI	RGATCY	3 cut(s)	535, 645, 913
MhlI	GDGCHC	1 cut(s)	1529
MlsI	TGGCCA	2 cut(s)	837, 2046
MluNI	TGGCCA	2 cut(s)	837, 2046
MlyI	GAGTC	5 cut(s)	78, 1459, 1502, 1728, 1886
MmeI	TCCRAC	6 cut(s)	69, 120, 156, 648, 1392, 1739
Mox20I	TGGCCA	2 cut(s)	837, 2046
Mph1103I	ATGCAT	2 cut(s)	235, 438
MroXI	GAANNNNTTC	1 cut(s)	1689
MscI	TGGCCA	2 cut(s)	837, 2046
MseI	TTAA	6 cut(s)	309, 759, 1197, 1629, 1938, 2034
MslI	CAYNNNNRTG	4 cut(s)	1214, 1295, 1428, 1590
Msp20I	TGGCCA	2 cut(s)	837, 2046
MspI	CCGG	2 cut(s)	71, 109
MspR9I	CCNGG	7 cut(s)	71, 109, 110, 473, 902, 929, 2043
MvaI	CCWGG	4 cut(s)	473, 902, 929, 2043
MwoI	GCNNNNNNNGC	7 cut(s)	433, 461, 680, 689, 1355, 1372, 1895
NciI	CCSGG	3 cut(s)	71, 109, 110
NdeI	CATATG	3 cut(s)	1230, 1618, 1800
NlaIII	CATG	9 cut(s)	251, 282, 436, 938, 1319, 1391, 1589, 1853, 1874
NlaIV	GGNNCC	3 cut(s)	91, 1536, 1827
NmeAIII	GCCGAG	2 cut(s)	123, 1900
NmuCI	GTSAC	1 cut(s)	1791
NsbI	TGCGCA	3 cut(s)	338, 653, 1848
NsiI	ATGCAT	2 cut(s)	235, 438
NspI	RCATGY	1 cut(s)	1589
PagI	TCATGA	2 cut(s)	247, 1315
PaqCI	CACCTGC	1 cut(s)	1087
PceI	AGGCCT	1 cut(s)	529
PciI	ACATGT	1 cut(s)	1585
PciSI	GCTCTTC	1 cut(s)	861
PdmI	GAANNNNTTC	1 cut(s)	1689
PfeI	GAWTC	5 cut(s)	41, 367, 793, 1277, 1658
PflMI	CCANNNNNTGG	1 cut(s)	928
PfoI	TCCNGGA	1 cut(s)	927
PkrI	GCNGC	5 cut(s)	153, 694, 1368, 1888, 1911
PleI	GAGTC	5 cut(s)	78, 1458, 1501, 1727, 1885
PmaCI	CACGTG	1 cut(s)	689
PmlI	CACGTG	1 cut(s)	689
PpsI	GAGTC	5 cut(s)	78, 1458, 1501, 1727, 1885
Ppu21I	YACGTR	2 cut(s)	467, 689
PscI	ACATGT	1 cut(s)	1585
PshBI	ATTAAT	1 cut(s)	1938
PsiI	TTATAA	1 cut(s)	803
Psp124BI	GAGCTC	1 cut(s)	1529
Psp6I	CCWGG	4 cut(s)	471, 900, 927, 2041
PspCI	CACGTG	1 cut(s)	689
PspFI	CCCAGC	1 cut(s)	51
PspGI	CCWGG	4 cut(s)	471, 900, 927, 2041
PspN4I	GGNNCC	3 cut(s)	91, 1536, 1827
PspPI	GGNCC	3 cut(s)	185, 673, 1826
PsuI	RGATCY	3 cut(s)	535, 645, 913
RsaI	GTAC	3 cut(s)	374, 469, 1078
RsaNI	GTAC	3 cut(s)	373, 468, 1077
RseI	CAYNNNNRTG	4 cut(s)	1214, 1295, 1428, 1590
SacI	GAGCTC	1 cut(s)	1529
SalI	GTCGAC	1 cut(s)	1223
SapI	GCTCTTC	1 cut(s)	861
SaqAI	TTAA	6 cut(s)	309, 759, 1197, 1629, 1938, 2034
SatI	GCNGC	5 cut(s)	152, 693, 1367, 1887, 1910
Sau96I	GGNCC	3 cut(s)	185, 673, 1826
SchI	GAGTC	5 cut(s)	78, 1459, 1502, 1728, 1886
ScrFI	CCNGG	7 cut(s)	71, 109, 110, 473, 902, 929, 2043
SduI	GDGCHC	1 cut(s)	1529
SfaNI	GCATC	4 cut(s)	220, 445, 1180, 2047
SfcI	CTRYAG	1 cut(s)	628
SinI	GGWCC	1 cut(s)	1826
SmaI	CCCGGG	1 cut(s)	110
SmiMI	CAYNNNNRTG	4 cut(s)	1214, 1295, 1428, 1590
SmlI	CTYRAG	3 cut(s)	477, 641, 886
SmoI	CTYRAG	3 cut(s)	477, 641, 886
SseBI	AGGCCT	1 cut(s)	529
SsiI	CCGC	1 cut(s)	124
SspI	AATATT	1 cut(s)	1627
SspMI	CTAG	2 cut(s)	1443, 1895
SstI	GAGCTC	1 cut(s)	1529
StuI	AGGCCT	1 cut(s)	529
StyD4I	CCNGG	7 cut(s)	69, 107, 108, 471, 900, 927, 2041
StyI	CCWWGG	4 cut(s)	354, 408, 602, 1473
TaaI	ACNGT	6 cut(s)	377, 637, 978, 1044, 1732, 1791
TaiI	ACGT	3 cut(s)	469, 691, 1740
TaqI	TCGA	8 cut(s)	15, 777, 951, 1118, 1224, 1448, 1496, 1696
TfiI	GAWTC	5 cut(s)	41, 367, 793, 1277, 1658
Tru1I	TTAA	6 cut(s)	309, 759, 1197, 1629, 1938, 2034
Tru9I	TTAA	6 cut(s)	309, 759, 1197, 1629, 1938, 2034
TscAI	CASTG	3 cut(s)	562, 642, 981
TseFI	GTSAC	1 cut(s)	1791
TseI	GCWGC	5 cut(s)	151, 692, 1366, 1886, 1909
Tsp45I	GTSAC	1 cut(s)	1791
TspGWI	ACGGA	1 cut(s)	170
TspMI	CCCGGG	1 cut(s)	108
TspRI	CASTG	3 cut(s)	562, 642, 981
Van91I	CCANNNNNTGG	1 cut(s)	928
VpaK11BI	GGWCC	1 cut(s)	1826
VspI	ATTAAT	1 cut(s)	1938
XapI	RAATTY	5 cut(s)	938, 995, 1306, 1456, 1833
XceI	RCATGY	1 cut(s)	1589
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1513
XmaI	CCCGGG	1 cut(s)	108
XmiI	GTMKAC	1 cut(s)	1224
XmnI	GAANNNNTTC	1 cut(s)	1689
XspI	CTAG	2 cut(s)	1443, 1895
Zsp2I	ATGCAT	2 cut(s)	235, 438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.