RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| eIF3a_PCI_TPR-like | PF22591 | 4 - 97 | 3.9e-28 | eIF3a, PCI domain, TPR-like region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 146 |
| AciI | CCGC | 1 cut(s) | 184 |
| AfaI | GTAC | 2 cut(s) | 182, 277 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 75 |
| AgsI | TTSAA | 2 cut(s) | 46, 104 |
| AluBI | AGCT | 3 cut(s) | 130, 213, 263 |
| AluI | AGCT | 3 cut(s) | 130, 213, 263 |
| AspLEI | GCGC | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| BccI | CCATC | 2 cut(s) | 81, 161 |
| BclI | TGATCA | 1 cut(s) | 15 |
| BfaI | CTAG | 1 cut(s) | 81 |
| BlpI | GCTNAGC | 1 cut(s) | 264 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 2 cut(s) | 162, 216 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 75 |
| BseDI | CCNNGG | 2 cut(s) | 162, 216 |
| BseGI | GGATG | 3 cut(s) | 10, 92, 172 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 75 |
| BseMII | CTCAG | 2 cut(s) | 255, 269 |
| BslFI | GGGAC | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 75 |
| BsmFI | GGGAC | 1 cut(s) | 299 |
| Bsp143I | GATC | 1 cut(s) | 15 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 264 |
| BspACI | CCGC | 1 cut(s) | 184 |
| BspCNI | CTCAG | 2 cut(s) | 256, 268 |
| BspHI | TCATGA | 1 cut(s) | 240 |
| BssECI | CCNNGG | 2 cut(s) | 162, 216 |
| BssMI | GATC | 1 cut(s) | 15 |
| BssT1I | CCWWGG | 2 cut(s) | 162, 216 |
| Bst6I | CTCTTC | 2 cut(s) | 57, 216 |
| BstC8I | GCNNGC | 1 cut(s) | 270 |
| BstDEI | CTNAG | 2 cut(s) | 255, 264 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 73 |
| BstF5I | GGATG | 3 cut(s) | 10, 92, 172 |
| BstHHI | GCGC | 1 cut(s) | 147 |
| BstKTI | GATC | 1 cut(s) | 18 |
| BstMBI | GATC | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 269 |
| BtsCI | GGATG | 3 cut(s) | 10, 92, 172 |
| Cac8I | GCNNGC | 1 cut(s) | 270 |
| CciI | TCATGA | 1 cut(s) | 240 |
| CfoI | GCGC | 1 cut(s) | 147 |
| Csp6I | GTAC | 2 cut(s) | 181, 276 |
| CviAII | CATG | 1 cut(s) | 241 |
| CviJI | RGCY | 4 cut(s) | 130, 213, 263, 272 |
| CviKI_1 | RGCY | 4 cut(s) | 130, 213, 263, 272 |
| CviQI | GTAC | 2 cut(s) | 181, 276 |
| DdeI | CTNAG | 2 cut(s) | 255, 264 |
| DpnI | GATC | 1 cut(s) | 17 |
| DpnII | GATC | 1 cut(s) | 15 |
| DraI | TTTAAA | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 2 cut(s) | 57, 216 |
| EarI | CTCTTC | 2 cut(s) | 57, 216 |
| Eco130I | CCWWGG | 2 cut(s) | 162, 216 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 73 |
| EcoT14I | CCWWGG | 2 cut(s) | 162, 216 |
| ErhI | CCWWGG | 2 cut(s) | 162, 216 |
| FaeI | CATG | 1 cut(s) | 244 |
| FaiI | YATR | 6 cut(s) | 57, 113, 123, 242, 305, 325 |
| FaqI | GGGAC | 1 cut(s) | 299 |
| FatI | CATG | 1 cut(s) | 240 |
| FbaI | TGATCA | 1 cut(s) | 15 |
| FokI | GGATG | 3 cut(s) | 17, 99, 179 |
| FspBI | CTAG | 1 cut(s) | 81 |
| FspI | TGCGCA | 1 cut(s) | 146 |
| GlaI | GCGC | 1 cut(s) | 146 |
| HhaI | GCGC | 1 cut(s) | 147 |
| Hin1II | CATG | 1 cut(s) | 244 |
| Hin6I | GCGC | 1 cut(s) | 145 |
| HinP1I | GCGC | 1 cut(s) | 145 |
| HincII | GTYRAC | 1 cut(s) | 197 |
| HindII | GTYRAC | 1 cut(s) | 197 |
| HinfI | GANTC | 2 cut(s) | 244, 312 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 2 cut(s) | 174, 258 |
| Hpy188III | TCNNGA | 4 cut(s) | 81, 241, 281, 316 |
| Hpy8I | GTNNAC | 1 cut(s) | 197 |
| HpyCH4V | TGCA | 1 cut(s) | 8 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 269 |
| HpyF3I | CTNAG | 2 cut(s) | 255, 264 |
| Hsp92II | CATG | 1 cut(s) | 244 |
| HspAI | GCGC | 1 cut(s) | 145 |
| Ksp22I | TGATCA | 1 cut(s) | 15 |
| Kzo9I | GATC | 1 cut(s) | 15 |
| LmnI | GCTCC | 1 cut(s) | 218 |
| LpnPI | CCDG | 3 cut(s) | 254, 258, 266 |
| MaeI | CTAG | 1 cut(s) | 81 |
| MalI | GATC | 1 cut(s) | 17 |
| MboI | GATC | 1 cut(s) | 15 |
| MboII | GAAGA | 3 cut(s) | 44, 233, 296 |
| MlyI | GAGTC | 1 cut(s) | 321 |
| MnlI | CCTC | 5 cut(s) | 31, 69, 77, 79, 217 |
| MseI | TTAA | 3 cut(s) | 117, 177, 294 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 269 |
| NdeII | GATC | 1 cut(s) | 15 |
| NlaIII | CATG | 1 cut(s) | 244 |
| NsbI | TGCGCA | 1 cut(s) | 146 |
| PagI | TCATGA | 1 cut(s) | 240 |
| PfeI | GAWTC | 1 cut(s) | 244 |
| PleI | GAGTC | 1 cut(s) | 320 |
| PpsI | GAGTC | 1 cut(s) | 320 |
| RsaI | GTAC | 2 cut(s) | 182, 277 |
| RsaNI | GTAC | 2 cut(s) | 181, 276 |
| SaqAI | TTAA | 3 cut(s) | 117, 177, 294 |
| Sau3AI | GATC | 1 cut(s) | 15 |
| SchI | GAGTC | 1 cut(s) | 321 |
| SetI | ASST | 7 cut(s) | 71, 80, 110, 132, 215, 228, 265 |
| SsiI | CCGC | 1 cut(s) | 184 |
| SspMI | CTAG | 1 cut(s) | 81 |
| StyI | CCWWGG | 2 cut(s) | 162, 216 |
| TfiI | GAWTC | 1 cut(s) | 244 |
| Tru1I | TTAA | 3 cut(s) | 117, 177, 294 |
| Tru9I | TTAA | 3 cut(s) | 117, 177, 294 |
| TspDTI | ATGAA | 3 cut(s) | 44, 229, 257 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 73 |
| XbaI | TCTAGA | 1 cut(s) | 80 |
| XspI | CTAG | 1 cut(s) | 81 |