RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1060 |
| Acc16I | TGCGCA | 1 cut(s) | 182 |
| Acc36I | ACCTGC | 1 cut(s) | 1060 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 901, 2510 |
| AccI | GTMKAC | 2 cut(s) | 1197, 1308 |
| AccII | CGCG | 1 cut(s) | 2551 |
| AciI | CCGC | 6 cut(s) | 1927, 1996, 2134, 2400, 2516, 2549 |
| AclI | AACGTT | 1 cut(s) | 1822 |
| AclWI | GGATC | 3 cut(s) | 894, 1114, 1767 |
| AcoI | YGGCCR | 2 cut(s) | 1689, 2280 |
| AcsI | RAATTY | 5 cut(s) | 7, 911, 968, 1271, 1344 |
| AcuI | CTGAAG | 7 cut(s) | 63, 396, 602, 972, 1521, 1583, 2112 |
| AcvI | CACGTG | 1 cut(s) | 710 |
| AfaI | GTAC | 3 cut(s) | 218, 313, 1051 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 901, 1207, 1960, 2157, 2510 |
| AflII | CTTAAG | 1 cut(s) | 631 |
| AflIII | ACRYGT | 1 cut(s) | 707 |
| AjnI | CCWGG | 7 cut(s) | 315, 873, 900, 1295, 1953, 2039, 2362 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1631, 1663 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2358, 2390 |
| Alw26I | GTCTC | 5 cut(s) | 510, 850, 1023, 1080, 1358 |
| AlwI | GGATC | 3 cut(s) | 894, 1114, 1767 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1367, 2417 |
| Ama87I | CYCGRG | 1 cut(s) | 1077 |
| AoxI | GGCC | 6 cut(s) | 371, 1689, 2037, 2276, 2280, 2435 |
| ApoI | RAATTY | 5 cut(s) | 7, 911, 968, 1271, 1344 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1347, 2075 |
| AspA2I | CCTAGG | 1 cut(s) | 2378 |
| AspLEI | GCGC | 4 cut(s) | 183, 750, 1890, 2448 |
| AspS9I | GGNCC | 1 cut(s) | 2535 |
| AsuC2I | CCSGG | 1 cut(s) | 2405 |
| AsuHPI | GGTGA | 3 cut(s) | 274, 1352, 1675 |
| AsuII | TTCGAA | 1 cut(s) | 454 |
| AvaI | CYCGRG | 1 cut(s) | 1077 |
| AvaII | GGWCC | 1 cut(s) | 2535 |
| AvrII | CCTAGG | 1 cut(s) | 2378 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 970, 1002 |
| BbrPI | CACGTG | 1 cut(s) | 710 |
| BbsI | GAAGAC | 1 cut(s) | 2503 |
| BccI | CCATC | 5 cut(s) | 197, 754, 903, 1241, 1646 |
| BceAI | ACGGC | 2 cut(s) | 417, 1676 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 66, 100, 1058, 1092, 2006, 2040 |
| BciT130I | CCWGG | 7 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364 |
| BclI | TGATCA | 4 cut(s) | 51, 264, 700, 1258 |
| BcnI | CCSGG | 1 cut(s) | 2405 |
| BcoDI | GTCTC | 5 cut(s) | 510, 850, 1023, 1080, 1358 |
| BfaI | CTAG | 7 cut(s) | 567, 1332, 1337, 1398, 1922, 2274, 2379 |
| BfmI | CTRYAG | 3 cut(s) | 1368, 2307, 2409 |
| BfoI | RGCGCY | 2 cut(s) | 1891, 2449 |
| BfrI | CTTAAG | 1 cut(s) | 631 |
| BfuAI | ACCTGC | 1 cut(s) | 1060 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2405 |
| BglII | AGATCT | 3 cut(s) | 379, 821, 2087 |
| BlnI | CCTAGG | 1 cut(s) | 2378 |
| BlpI | GCTNAGC | 2 cut(s) | 300, 1877 |
| Bme1390I | CCNGG | 8 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364, 2405 |
| Bme18I | GGWCC | 1 cut(s) | 2535 |
| BmeT110I | CYCGRG | 1 cut(s) | 1077 |
| BmgT120I | GGNCC | 1 cut(s) | 2535 |
| BmiI | GGNNCC | 1 cut(s) | 1559 |
| BmrFI | CCNGG | 8 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364, 2405 |
| BmsI | GCATC | 7 cut(s) | 64, 289, 668, 1153, 1337, 1978, 2392 |
| BpiI | GAAGAC | 1 cut(s) | 2503 |
| BpmI | CTGGAG | 3 cut(s) | 923, 1049, 2069 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2219 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 300, 1877 |
| Bpu14I | TTCGAA | 1 cut(s) | 454 |
| BpuEI | CTTGAG | 3 cut(s) | 306, 880, 1466 |
| BpuMI | CCSGG | 1 cut(s) | 2405 |
| BsaAI | YACGTR | 2 cut(s) | 311, 710 |
| BsaI | GGTCTC | 2 cut(s) | 510, 850 |
| BsaJI | CCNNGG | 7 cut(s) | 198, 252, 315, 873, 1296, 2378, 2403 |
| BsaWI | WCCGGW | 2 cut(s) | 19, 2296 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1542, 1572, 1587, 1617 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 901, 1207, 1960, 2157, 2510 |
| Bse118I | RCCGGY | 1 cut(s) | 2278 |
| Bse1I | ACTGG | 2 cut(s) | 846, 2052 |
| Bse3DI | GCAATG | 2 cut(s) | 77, 2067 |
| BseBI | CCWGG | 7 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364 |
| BseDI | CCNNGG | 7 cut(s) | 198, 252, 315, 873, 1296, 2378, 2403 |
| BseGI | GGATG | 8 cut(s) | 208, 765, 1122, 1168, 1657, 1935, 2200, 2540 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 901, 1207, 1960, 2157, 2510 |
| BseMI | GCAATG | 2 cut(s) | 77, 2067 |
| BseMII | CTCAG | 7 cut(s) | 282, 291, 380, 531, 1269, 1527, 1868 |
| BseNI | ACTGG | 2 cut(s) | 846, 2052 |
| BseRI | GAGGAG | 4 cut(s) | 819, 1305, 1489, 2176 |
| BseYI | CCCAGC | 1 cut(s) | 2449 |
| BsgI | GTGCAG | 3 cut(s) | 519, 663, 2334 |
| Bsh1236I | CGCG | 1 cut(s) | 2551 |
| BshFI | GGCC | 6 cut(s) | 373, 1691, 2039, 2278, 2282, 2437 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1077 |
| BsiSI | CCGG | 4 cut(s) | 20, 2279, 2297, 2405 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 901, 1207, 1960, 2157, 2510 |
| BsmAI | GTCTC | 5 cut(s) | 510, 850, 1023, 1080, 1358 |
| BsnI | GGCC | 6 cut(s) | 373, 1691, 2039, 2278, 2282, 2437 |
| Bso31I | GGTCTC | 2 cut(s) | 510, 850 |
| BsoBI | CYCGRG | 1 cut(s) | 1077 |
| Bsp119I | TTCGAA | 1 cut(s) | 454 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 300, 1877 |
| BspACI | CCGC | 6 cut(s) | 1927, 1996, 2134, 2400, 2516, 2549 |
| BspANI | GGCC | 6 cut(s) | 373, 1691, 2039, 2278, 2282, 2437 |
| BspCNI | CTCAG | 7 cut(s) | 283, 292, 381, 532, 1270, 1528, 1869 |
| BspFNI | CGCG | 1 cut(s) | 2551 |
| BspHI | TCATGA | 2 cut(s) | 91, 1846 |
| BspLI | GGNNCC | 1 cut(s) | 1559 |
| BspMAI | CTGCAG | 1 cut(s) | 2413 |
| BspMI | ACCTGC | 1 cut(s) | 1060 |
| BspPI | GGATC | 3 cut(s) | 894, 1114, 1767 |
| BspQI | GCTCTTC | 2 cut(s) | 834, 2007 |
| BspT104I | TTCGAA | 1 cut(s) | 454 |
| BspTI | CTTAAG | 1 cut(s) | 631 |
| BspTNI | GGTCTC | 2 cut(s) | 510, 850 |
| BsrDI | GCAATG | 2 cut(s) | 77, 2067 |
| BsrFI | RCCGGY | 1 cut(s) | 2278 |
| BsrI | ACTGG | 2 cut(s) | 846, 2052 |
| BssAI | RCCGGY | 1 cut(s) | 2278 |
| BssECI | CCNNGG | 7 cut(s) | 198, 252, 315, 873, 1296, 2378, 2403 |
| BssT1I | CCWWGG | 3 cut(s) | 198, 252, 2378 |
| Bst2UI | CCWGG | 7 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364 |
| Bst4CI | ACNGT | 6 cut(s) | 221, 555, 606, 951, 1017, 1369 |
| BstAFI | CTTAAG | 1 cut(s) | 631 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 277 |
| BstBAI | YACGTR | 2 cut(s) | 311, 710 |
| BstBI | TTCGAA | 1 cut(s) | 454 |
| BstDEI | CTNAG | 8 cut(s) | 291, 300, 389, 540, 1278, 1536, 1877, 2219 |
| BstEII | GGTNACC | 1 cut(s) | 1663 |
| BstF5I | GGATG | 8 cut(s) | 208, 765, 1122, 1168, 1657, 1935, 2200, 2540 |
| BstFNI | CGCG | 1 cut(s) | 2551 |
| BstH2I | RGCGCY | 2 cut(s) | 1891, 2449 |
| BstHHI | GCGC | 4 cut(s) | 183, 750, 1890, 2448 |
| BstMAI | GTCTC | 5 cut(s) | 510, 850, 1023, 1080, 1358 |
| BstNI | CCWGG | 7 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364 |
| BstNSI | RCATGY | 1 cut(s) | 1982 |
| BstPI | GGTNACC | 1 cut(s) | 1663 |
| BstSCI | CCNGG | 8 cut(s) | 315, 873, 900, 1295, 1953, 2039, 2362, 2403 |
| BstSFI | CTRYAG | 3 cut(s) | 1368, 2307, 2409 |
| BstUI | CGCG | 1 cut(s) | 2551 |
| BstV2I | GAAGAC | 1 cut(s) | 2503 |
| BstX2I | RGATCY | 4 cut(s) | 379, 821, 886, 2087 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1303, 1756, 2047 |
| BstYI | RGATCY | 4 cut(s) | 379, 821, 886, 2087 |
| BsuRI | GGCC | 6 cut(s) | 373, 1691, 2039, 2278, 2282, 2437 |
| BtsCI | GGATG | 8 cut(s) | 208, 765, 1122, 1168, 1657, 1935, 2200, 2540 |
| BtsI | GCAGTG | 1 cut(s) | 2491 |
| BtsIMutI | CAGTG | 2 cut(s) | 947, 2491 |
| BveI | ACCTGC | 1 cut(s) | 1060 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1367, 2417 |
| CciI | TCATGA | 2 cut(s) | 91, 1846 |
| CfoI | GCGC | 4 cut(s) | 183, 750, 1890, 2448 |
| Cfr10I | RCCGGY | 1 cut(s) | 2278 |
| Cfr13I | GGNCC | 1 cut(s) | 2535 |
| Csp6I | GTAC | 3 cut(s) | 217, 312, 1050 |
| CviQI | GTAC | 3 cut(s) | 217, 312, 1050 |
| DdeI | CTNAG | 8 cut(s) | 291, 300, 389, 540, 1278, 1536, 1877, 2219 |
| DraI | TTTAAA | 1 cut(s) | 154 |
| EaeI | YGGCCR | 2 cut(s) | 1689, 2280 |
| EciI | GGCGGA | 1 cut(s) | 2011 |
| Eco130I | CCWWGG | 3 cut(s) | 198, 252, 2378 |
| Eco147I | AGGCCT | 2 cut(s) | 373, 2437 |
| Eco31I | GGTCTC | 2 cut(s) | 510, 850 |
| Eco47I | GGWCC | 1 cut(s) | 2535 |
| Eco57I | CTGAAG | 7 cut(s) | 63, 396, 602, 972, 1521, 1583, 2112 |
| Eco72I | CACGTG | 1 cut(s) | 710 |
| Eco88I | CYCGRG | 1 cut(s) | 1077 |
| Eco91I | GGTNACC | 1 cut(s) | 1663 |
| EcoO65I | GGTNACC | 1 cut(s) | 1663 |
| EcoRII | CCWGG | 7 cut(s) | 315, 873, 900, 1295, 1953, 2039, 2362 |
| EcoT14I | CCWWGG | 3 cut(s) | 198, 252, 2378 |
| EcoT22I | ATGCAT | 2 cut(s) | 79, 282 |
| ErhI | CCWWGG | 3 cut(s) | 198, 252, 2378 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 324, 356, 875, 907, 1934, 1966 |
| FauI | CCCGC | 2 cut(s) | 2141, 2509 |
| FauNDI | CATATG | 1 cut(s) | 1203 |
| FbaI | TGATCA | 4 cut(s) | 51, 264, 700, 1258 |
| FblI | GTMKAC | 2 cut(s) | 1197, 1308 |
| FokI | GGATG | 8 cut(s) | 215, 772, 1129, 1175, 1664, 1942, 2207, 2527 |
| FseI | GGCCGGCC | 1 cut(s) | 2282 |
| FspBI | CTAG | 7 cut(s) | 567, 1332, 1337, 1398, 1922, 2274, 2379 |
| FspI | TGCGCA | 1 cut(s) | 182 |
| GlaI | GCGC | 4 cut(s) | 182, 749, 1889, 2447 |
| GsaI | CCCAGC | 1 cut(s) | 2453 |
| GsuI | CTGGAG | 3 cut(s) | 923, 1049, 2069 |
| HaeII | RGCGCY | 2 cut(s) | 1891, 2449 |
| HaeIII | GGCC | 6 cut(s) | 373, 1691, 2039, 2278, 2282, 2437 |
| HapII | CCGG | 4 cut(s) | 20, 2279, 2297, 2405 |
| HhaI | GCGC | 4 cut(s) | 183, 750, 1890, 2448 |
| Hin6I | GCGC | 4 cut(s) | 181, 748, 1888, 2446 |
| HinP1I | GCGC | 4 cut(s) | 181, 748, 1888, 2446 |
| HincII | GTYRAC | 6 cut(s) | 175, 233, 288, 954, 1198, 1442 |
| HindII | GTYRAC | 6 cut(s) | 175, 233, 288, 954, 1198, 1442 |
| HindIII | AAGCTT | 2 cut(s) | 616, 1043 |
| HinfI | GANTC | 9 cut(s) | 211, 478, 1241, 1280, 1469, 1532, 1787, 2032, 2430 |
| HpaII | CCGG | 4 cut(s) | 20, 2279, 2297, 2405 |
| HphI | GGTGA | 3 cut(s) | 274, 1352, 1675 |
| Hpy166II | GTNNAC | 7 cut(s) | 175, 233, 288, 954, 1198, 1309, 1442 |
| Hpy188I | TCNGA | 9 cut(s) | 210, 495, 639, 705, 838, 1116, 1246, 1537, 2092 |
| Hpy8I | GTNNAC | 7 cut(s) | 175, 233, 288, 954, 1198, 1309, 1442 |
| HpyCH4III | ACNGT | 6 cut(s) | 221, 555, 606, 951, 1017, 1369 |
| HpyCH4IV | ACGT | 6 cut(s) | 310, 709, 1438, 1459, 1822, 1852 |
| HpyF3I | CTNAG | 8 cut(s) | 291, 300, 389, 540, 1278, 1536, 1877, 2219 |
| HpySE526I | ACGT | 6 cut(s) | 310, 709, 1438, 1459, 1822, 1852 |
| HspAI | GCGC | 4 cut(s) | 181, 748, 1888, 2446 |
| KroI | GCCGGC | 1 cut(s) | 2278 |
| KroNI | GCCGGC | 1 cut(s) | 2280 |
| Ksp22I | TGATCA | 4 cut(s) | 51, 264, 700, 1258 |
| LguI | GCTCTTC | 2 cut(s) | 834, 2007 |
| LmnI | GCTCC | 8 cut(s) | 163, 904, 1068, 1563, 1798, 2323, 2332, 2365 |
| LweI | GCATC | 7 cut(s) | 64, 289, 668, 1153, 1337, 1978, 2392 |
| MaeI | CTAG | 7 cut(s) | 567, 1332, 1337, 1398, 1922, 2274, 2379 |
| MaeII | ACGT | 6 cut(s) | 310, 709, 1438, 1459, 1822, 1852 |
| MaeIII | GTNAC | 2 cut(s) | 1226, 1663 |
| MflI | RGATCY | 4 cut(s) | 379, 821, 886, 2087 |
| MlyI | GAGTC | 5 cut(s) | 1250, 1289, 1478, 1541, 1796 |
| Mph1103I | ATGCAT | 2 cut(s) | 79, 282 |
| MroNI | GCCGGC | 1 cut(s) | 2278 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1347, 2075 |
| MseI | TTAA | 7 cut(s) | 153, 621, 632, 653, 780, 1170, 1736 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1187, 1691, 1851 |
| MspA1I | CMGCKG | 2 cut(s) | 580, 1864 |
| MspCI | CTTAAG | 1 cut(s) | 631 |
| MspI | CCGG | 4 cut(s) | 20, 2279, 2297, 2405 |
| MspR9I | CCNGG | 8 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364, 2405 |
| MvaI | CCWGG | 7 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364 |
| MvnI | CGCG | 1 cut(s) | 2551 |
| NaeI | GCCGGC | 1 cut(s) | 2280 |
| NciI | CCSGG | 1 cut(s) | 2405 |
| NdeI | CATATG | 1 cut(s) | 1203 |
| NgoMIV | GCCGGC | 1 cut(s) | 2278 |
| NlaIV | GGNNCC | 1 cut(s) | 1559 |
| NmeAIII | GCCGAG | 1 cut(s) | 2176 |
| NmuCI | GTSAC | 1 cut(s) | 1663 |
| NsbI | TGCGCA | 1 cut(s) | 182 |
| NsiI | ATGCAT | 2 cut(s) | 79, 282 |
| NspI | RCATGY | 1 cut(s) | 1982 |
| NspV | TTCGAA | 1 cut(s) | 454 |
| PaeI | GCATGC | 1 cut(s) | 1982 |
| PagI | TCATGA | 2 cut(s) | 91, 1846 |
| PaqCI | CACCTGC | 1 cut(s) | 1060 |
| PceI | AGGCCT | 2 cut(s) | 373, 2437 |
| PciSI | GCTCTTC | 2 cut(s) | 834, 2007 |
| PdiI | GCCGGC | 1 cut(s) | 2280 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1347, 2075 |
| PfeI | GAWTC | 4 cut(s) | 211, 478, 2032, 2430 |
| PflFI | GACNNNGTC | 1 cut(s) | 2533 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 901, 2510 |
| PfoI | TCCNGGA | 3 cut(s) | 900, 1953, 2362 |
| PleI | GAGTC | 5 cut(s) | 1249, 1288, 1477, 1540, 1795 |
| PmaCI | CACGTG | 1 cut(s) | 710 |
| PmlI | CACGTG | 1 cut(s) | 710 |
| PpsI | GAGTC | 5 cut(s) | 1249, 1288, 1477, 1540, 1795 |
| Ppu21I | YACGTR | 2 cut(s) | 311, 710 |
| Psp1406I | AACGTT | 1 cut(s) | 1822 |
| Psp6I | CCWGG | 7 cut(s) | 315, 873, 900, 1295, 1953, 2039, 2362 |
| PspCI | CACGTG | 1 cut(s) | 710 |
| PspEI | GGTNACC | 1 cut(s) | 1663 |
| PspFI | CCCAGC | 1 cut(s) | 2449 |
| PspGI | CCWGG | 7 cut(s) | 315, 873, 900, 1295, 1953, 2039, 2362 |
| PspN4I | GGNNCC | 1 cut(s) | 1559 |
| PspPI | GGNCC | 1 cut(s) | 2535 |
| PstI | CTGCAG | 1 cut(s) | 2413 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1367, 2417 |
| PsuI | RGATCY | 4 cut(s) | 379, 821, 886, 2087 |
| PsyI | GACNNNGTC | 1 cut(s) | 2533 |
| PvuII | CAGCTG | 2 cut(s) | 580, 1864 |
| RigI | GGCCGGCC | 1 cut(s) | 2282 |
| RsaI | GTAC | 3 cut(s) | 218, 313, 1051 |
| RsaNI | GTAC | 3 cut(s) | 217, 312, 1050 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1187, 1691, 1851 |
| SalI | GTCGAC | 1 cut(s) | 1196 |
| SapI | GCTCTTC | 2 cut(s) | 834, 2007 |
| SaqAI | TTAA | 7 cut(s) | 153, 621, 632, 653, 780, 1170, 1736 |
| Sau96I | GGNCC | 1 cut(s) | 2535 |
| SchI | GAGTC | 5 cut(s) | 1250, 1289, 1478, 1541, 1796 |
| ScrFI | CCNGG | 8 cut(s) | 317, 875, 902, 1297, 1955, 2041, 2364, 2405 |
| SfaNI | GCATC | 7 cut(s) | 64, 289, 668, 1153, 1337, 1978, 2392 |
| SfcI | CTRYAG | 3 cut(s) | 1368, 2307, 2409 |
| SfuI | TTCGAA | 1 cut(s) | 454 |
| SinI | GGWCC | 1 cut(s) | 2535 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1187, 1691, 1851 |
| SmlI | CTYRAG | 4 cut(s) | 321, 631, 859, 1481 |
| SmoI | CTYRAG | 4 cut(s) | 321, 631, 859, 1481 |
| SphI | GCATGC | 1 cut(s) | 1982 |
| SseBI | AGGCCT | 2 cut(s) | 373, 2437 |
| SsiI | CCGC | 6 cut(s) | 1927, 1996, 2134, 2400, 2516, 2549 |
| SspI | AATATT | 1 cut(s) | 2076 |
| SspMI | CTAG | 7 cut(s) | 567, 1332, 1337, 1398, 1922, 2274, 2379 |
| StuI | AGGCCT | 2 cut(s) | 373, 2437 |
| StyD4I | CCNGG | 8 cut(s) | 315, 873, 900, 1295, 1953, 2039, 2362, 2403 |
| StyI | CCWWGG | 3 cut(s) | 198, 252, 2378 |
| TaaI | ACNGT | 6 cut(s) | 221, 555, 606, 951, 1017, 1369 |
| TaiI | ACGT | 6 cut(s) | 313, 712, 1441, 1462, 1825, 1855 |
| TaqII | GACCGA | 1 cut(s) | 534 |
| TauI | GCSGC | 1 cut(s) | 2402 |
| TfiI | GAWTC | 4 cut(s) | 211, 478, 2032, 2430 |
| Tru1I | TTAA | 7 cut(s) | 153, 621, 632, 653, 780, 1170, 1736 |
| Tru9I | TTAA | 7 cut(s) | 153, 621, 632, 653, 780, 1170, 1736 |
| TscAI | CASTG | 2 cut(s) | 954, 2491 |
| TseFI | GTSAC | 1 cut(s) | 1663 |
| Tsp45I | GTSAC | 1 cut(s) | 1663 |
| TspGWI | ACGGA | 1 cut(s) | 461 |
| TspRI | CASTG | 2 cut(s) | 954, 2491 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2533 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 901, 2510 |
| Vha464I | CTTAAG | 1 cut(s) | 631 |
| VpaK11BI | GGWCC | 1 cut(s) | 2535 |
| XapI | RAATTY | 5 cut(s) | 7, 911, 968, 1271, 1344 |
| XbaI | TCTAGA | 1 cut(s) | 1331 |
| XceI | RCATGY | 1 cut(s) | 1982 |
| XmaJI | CCTAGG | 1 cut(s) | 2378 |
| XmiI | GTMKAC | 2 cut(s) | 1197, 1308 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1347, 2075 |
| XspI | CTAG | 7 cut(s) | 567, 1332, 1337, 1398, 1922, 2274, 2379 |
| Zsp2I | ATGCAT | 2 cut(s) | 79, 282 |