Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001063

Physical Location & Seq

Genomic Coordinates Reverse (-)

44162193 .. 44170319

Gene Structure 8127 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG333700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGCCTCCTCCCTCGACCACAACCACACCCTGAACGGCGATTCCAACACCCAGCAATGGCCTCCTCCCCCGGCCATTATCGGACTCGGAGCCTCCAACTCCACTCCCCAGGTCGGGTTCTTCCGCCACTCCAACCCCAAACTCGGCGAGCAGCTCCTCTACTTCATCCTCTCTTCCCTCCGTGGCCCAATTCAATCCGCCAAGTTGATCAATGTTGGGCAGAAGCAAGATGCATTGCAATCGCTTCATGATCTTATTACATCAAAGAGATATAGAGCATGGCAGAAGCCACTTGAAAAAATTATGTTTAAATATGTGGAGCTTTGTGTTGACTTGCGCAAGGGTAGATTTGCCAAGGATGGTCTGATTCAGTACCGTATTATATGTCAACAAGTAAATGTCAGTTCCTTGGAAGAGGTGATCAAGCACTTCATGCATCTGTCAACTGAGAAAGCTGAGCAGGCACGTACCCAGGCTCAAGCATTAGAAGAAGCACTTGATGTTGATGACCTCGAAGCAGATAAGAGGCCTGAAGATCTAATGCTGAGTTATGTCAGTGGAGAGAAAGGAAAAGATAGGTCTGATCGTGAAGTTGTTACTCCTTGGTTCAAGTTTTTGTGGGAAACCTACAGAACAGTGCTTGAGATCTTGCGCAACAACTCAAAGTTGGAGGCCCTTTATGCGACACGTGCTGCCTCTCACTTGGAACTTGAAAATGAGAAAGAGCGCAATTTGAGGATGGCTAATCTAATTGGCTTTAATCTTGACCCCAAAATCGACAGAGGAGATGTGCTTTCAAGATCTGCTCTTCTATCAGAACTGGTCTCCAAAGGTGTCTTGAGCTGTGCAACCCAGGAAGTAAAGGATCTCTTCCATCTCCTGGAGCATGAATTTCTACCTCTCGACCTTGCTGTAAAGATACAACCACTGTTGACTAAAATTTCAAAATTTGGGGGTAAGCTGGCTTCAGCTTCTTCTGTTCCTGAAGTGCAACTGTCTCAATATGTTCCTGCACTTGAAAAGCTTGGTACTTTGAGGTTGCTCCAGCAGGTGTCTCGGGTGTATCAGTCGATGAAGATTGAACATTTATCTCGGATGATCCCATTTTATGACTTTTCTGTTGTAGAGAAGATATATGTGGATGCTGTTAAACATAACTTCATAGCTATGAAAGTCGACCATATGAAGGGTGTTATGATGTTTGGTAACTTGGCTTATTTGCAGCAAGAGCTGGAAAAATTACATGATCTTAGGAACAAAGTCAAGTTGGAAGGGGAACATTGGGATGACCTTGTATCTAGTTCGAGTCAGAATTCTCATTTAGTATCCAAGGCTACTCGTTTGTGGGAGTCGATATTAGCCCGTAAAAGTCAACATGAAGTTCTTGCTTCGGGCCCTATCGAGGATTTAATCGCTCATCGGGAGCATAGGTACCGCATTTCTGGATCTTCTTTGCTTGCAGCTATGGATCAGAGCTCTCAGGTTCCTTATGCAGATGTCTTATCTGTCCAGTCTGGTGATTTTACTCCTACACATGTAGATGATAAAGAGCAGAGTGATGGTTCATATGTCAATATTAACAGAGAAAAGATGAAGAATAATTTAGATTCATCCCATTCACAAGTAAATGATGAAACTCTTCATCGAGCAGATGAGAGAAGTGGAAGAGTCCACCCAACTGTTGACGTGGCAGAAATTATCAGGCGTTGGACACATACTTTACAGCGTATTCATAAACAGTCACTTCATATGGCAAAAGCTAATGAGGGAGAGGGTCCAGAAATTCTAAGAAGTGCGCATGAAGGCAGTTCAAGTGGTCATGCCGAGCCATTAGCTGCAACACTAGCTGAACATCAGCAGCACTTGGTTAGCTTTCAGATTGGGGGAGTTTCGGACCAGGTTGAAATCACAAACAGGTTGAAATCACAAACAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001732 GO:0002181 GO:0002183 GO:0002188 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005852 GO:0005886 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0043614 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0071540 GO:0071541 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PCI

Protein Analysis

645

Amino Acids

72.89

Weight (kDa)

6.5

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF3a_PCI_TPR-like	PF22591	67 - 236	2e-58	eIF3a, PCI domain, TPR-like region
PCI	PF01399	331 - 401	2.1e-06	PCI domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11420
fragaria_vesca	FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021
malus_domestica	MD04G1196800.v1.1 MD12G1209700.v1.1
prunus_persica	Prupe.6G317100_v2.0.a1 Prupe.6G317100_v2.0.a1
pyrus_communis	pycom04g17400 pycom12g19700
rosa_chinensis	RchiOBHm_Chr2g0109021 RchiOBHm_Chr3g0456551 RchiOBHm_Chr5g0047251 RchiOBHm_Chr6g0248701
rosa_laevigata	RLG00000025294 RLG00000028631
rosa_multiflora	Rmu_sc0000361.1_g000030 Rmu_sc0000670.1_g000004 Rmu_sc0000955.1_g000029 Rmu_sc0002045.1_g000025 Rmu_sc0002607.1_g000004 Rmu_sc0005473.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037410 Rroxscaffold_2G00104310 Rroxscaffold_3G00230480 Rroxscaffold_3G00256140 Rroxscaffold_6G00422630
rosa_rugosa	Rorug03G0013900 Rorug04G0204200
rosa_samantha	Rh1BG180500 Rh1DG210500 Rh2CG210900 Rh2DG107300 Rh2DG455500 Rh3AG074600 Rh3AG217800 Rh3BG076300 Rh3CG076000 Rh3DG078100 Rh4AG261300 Rh4BG267100 Rh4DG188600 Rh4DG191400 Rh4DG263400 Rh5BG322700 Rh5BG536200 Rh5BG542500 Rh5CG559400 Rh5CG565100 Rh5DG333700 Rh5DG412500 Rh6AG116300 Rh6BG110500 Rh6CG264500
rosa_wichuraiana	Rw3G006380 Rw5G047630 Rw6G003410 Rw6G025160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1039
Acc16I	TGCGCA	3 cut(s)	338, 653, 1797
Acc36I	ACCTGC	1 cut(s)	1039
Acc65I	GGTACC	1 cut(s)	1431
AccB1I	GGYRCC	1 cut(s)	1431
AccB7I	CCANNNNNTGG	1 cut(s)	880
AccI	GTMKAC	1 cut(s)	1176
AciI	CCGC	3 cut(s)	124, 198, 1435
AclWI	GGATC	4 cut(s)	873, 1093, 1453, 1476
AcoI	YGGCCR	1 cut(s)	72
AcsI	RAATTY	5 cut(s)	890, 939, 947, 1312, 1782
AcuI	CTGAAG	3 cut(s)	552, 951, 1005
AcvI	CACGTG	1 cut(s)	689
AfaI	GTAC	4 cut(s)	374, 469, 1030, 1433
AfiI	CCNNNNNNNGG	7 cut(s)	57, 113, 114, 143, 880, 1186, 1402
AflIII	ACRYGT	2 cut(s)	686, 1534
AjiI	CACGTC	1 cut(s)	1687
AjnI	CCWGG	5 cut(s)	108, 471, 852, 879, 1896
AloI	GAACNNNNNNTCC	2 cut(s)	26, 58
Alw21I	GWGCWC	1 cut(s)	1478
Alw26I	GTCTC	3 cut(s)	829, 1002, 1059
AlwI	GGATC	4 cut(s)	873, 1093, 1453, 1476
Ama87I	CYCGRG	1 cut(s)	1056
AoxI	GGCC	7 cut(s)	3, 59, 72, 184, 527, 672, 1393
ApaI	GGGCCC	1 cut(s)	1397
ApeKI	GCWGC	6 cut(s)	151, 692, 1222, 1460, 1835, 1858
ApoI	RAATTY	5 cut(s)	890, 939, 947, 1312, 1782
Asp700I	GAANNNNTTC	1 cut(s)	1638
Asp718I	GGTACC	1 cut(s)	1431
AspLEI	GCGC	4 cut(s)	339, 654, 729, 1798
AspS9I	GGNCC	6 cut(s)	185, 673, 1393, 1394, 1775, 1894
AsuC2I	CCSGG	1 cut(s)	71
AsuHPI	GGTGA	2 cut(s)	430, 1529
AvaI	CYCGRG	1 cut(s)	1056
AvaII	GGWCC	2 cut(s)	1775, 1894
BaeGI	GKGCMC	1 cut(s)	1397
BanI	GGYRCC	1 cut(s)	1431
BanII	GRGCYC	2 cut(s)	1397, 1478
BarI	GAAGNNNNNNTAC	2 cut(s)	949, 981
BbrPI	CACGTG	1 cut(s)	689
Bbv12I	GWGCWC	1 cut(s)	1478
BbvI	GCAGC	6 cut(s)	163, 679, 1234, 1472, 1822, 1870
BccI	CCATC	4 cut(s)	353, 733, 882, 1553
BceAI	ACGGC	1 cut(s)	52
BcgI	CGANNNNNNTGC	4 cut(s)	222, 256, 1037, 1071
BciT130I	CCWGG	5 cut(s)	110, 473, 854, 881, 1898
BciVI	GTATCC	1 cut(s)	1336
BclI	TGATCA	2 cut(s)	207, 420
BcnI	CCSGG	1 cut(s)	71
BcoDI	GTCTC	3 cut(s)	829, 1002, 1059
BfaI	CTAG	2 cut(s)	1299, 1844
BfmI	CTRYAG	1 cut(s)	628
BfuAI	ACCTGC	1 cut(s)	1039
BfuI	GTATCC	1 cut(s)	1336
BglII	AGATCT	3 cut(s)	535, 645, 800
BisI	GCNGC	6 cut(s)	152, 693, 1223, 1461, 1836, 1859
BlpI	GCTNAGC	1 cut(s)	456
BlsI	GCNGC	6 cut(s)	153, 694, 1224, 1462, 1837, 1860
Bme1390I	CCNGG	6 cut(s)	71, 110, 473, 854, 881, 1898
Bme18I	GGWCC	2 cut(s)	1775, 1894
BmeT110I	CYCGRG	1 cut(s)	1056
BmgBI	CACGTC	1 cut(s)	1687
BmgT120I	GGNCC	6 cut(s)	185, 673, 1393, 1394, 1775, 1894
BmiI	GGNNCC	5 cut(s)	91, 1395, 1433, 1485, 1776
BmrFI	CCNGG	6 cut(s)	71, 110, 473, 854, 881, 1898
BmsI	GCATC	3 cut(s)	220, 445, 1132
BpmI	CTGGAG	2 cut(s)	902, 1028
Bpu1102I	GCTNAGC	1 cut(s)	456
BpuEI	CTTGAG	3 cut(s)	462, 662, 859
BpuMI	CCSGG	1 cut(s)	71
BsaAI	YACGTR	2 cut(s)	467, 689
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	9 cut(s)	69, 108, 181, 354, 408, 471, 602, 852, 1329
BsaXI	ACNNNNNCTCC	2 cut(s)	1415, 1445
Bsc4I	CCNNNNNNNGG	7 cut(s)	57, 113, 114, 143, 880, 1186, 1402
Bse1I	ACTGG	2 cut(s)	825, 1510
Bse3DI	GCAATG	2 cut(s)	62, 233
BseBI	CCWGG	5 cut(s)	110, 473, 854, 881, 1898
BseDI	CCNNGG	9 cut(s)	69, 108, 181, 354, 408, 471, 602, 852, 1329
BseGI	GGATG	7 cut(s)	165, 364, 744, 1101, 1147, 1291, 1610
BseLI	CCNNNNNNNGG	7 cut(s)	57, 113, 114, 143, 880, 1186, 1402
BseMI	GCAATG	2 cut(s)	62, 233
BseMII	CTCAG	4 cut(s)	438, 447, 536, 1493
BseNI	ACTGG	2 cut(s)	825, 1510
BseRI	GAGGAG	3 cut(s)	54, 146, 798
BseSI	GKGCMC	1 cut(s)	1397
BseXI	GCAGC	6 cut(s)	163, 679, 1234, 1472, 1822, 1870
BseYI	CCCAGC	1 cut(s)	51
BsgI	GTGCAG	1 cut(s)	996
BshFI	GGCC	7 cut(s)	5, 61, 74, 186, 529, 674, 1395
BshNI	GGYRCC	1 cut(s)	1431
BsiHKAI	GWGCWC	1 cut(s)	1478
BsiHKCI	CYCGRG	1 cut(s)	1056
BsiSI	CCGG	1 cut(s)	71
BslI	CCNNNNNNNGG	7 cut(s)	57, 113, 114, 143, 880, 1186, 1402
BsmAI	GTCTC	3 cut(s)	829, 1002, 1059
BsnI	GGCC	7 cut(s)	5, 61, 74, 186, 529, 674, 1395
Bso31I	GGTCTC	1 cut(s)	829
BsoBI	CYCGRG	1 cut(s)	1056
Bsp120I	GGGCCC	1 cut(s)	1393
Bsp1286I	GDGCHC	2 cut(s)	1397, 1478
Bsp1720I	GCTNAGC	1 cut(s)	456
BspACI	CCGC	3 cut(s)	124, 198, 1435
BspANI	GGCC	7 cut(s)	5, 61, 74, 186, 529, 674, 1395
BspCNI	CTCAG	4 cut(s)	439, 448, 537, 1492
BspHI	TCATGA	1 cut(s)	247
BspLI	GGNNCC	5 cut(s)	91, 1395, 1433, 1485, 1776
BspMI	ACCTGC	1 cut(s)	1039
BspPI	GGATC	4 cut(s)	873, 1093, 1453, 1476
BspQI	GCTCTTC	1 cut(s)	813
BspT107I	GGYRCC	1 cut(s)	1431
BspTNI	GGTCTC	1 cut(s)	829
BsrDI	GCAATG	2 cut(s)	62, 233
BsrI	ACTGG	2 cut(s)	825, 1510
BssECI	CCNNGG	9 cut(s)	69, 108, 181, 354, 408, 471, 602, 852, 1329
BssT1I	CCWWGG	4 cut(s)	354, 408, 602, 1329
Bst2UI	CCWGG	5 cut(s)	110, 473, 854, 881, 1898
Bst4CI	ACNGT	6 cut(s)	377, 637, 930, 996, 1681, 1740
Bst6I	CTCTTC	6 cut(s)	178, 408, 813, 875, 1644, 1660
BstAPI	GCANNNNNTGC	1 cut(s)	433
BstBAI	YACGTR	2 cut(s)	467, 689
BstC8I	GCNNGC	4 cut(s)	149, 462, 963, 1458
BstDEI	CTNAG	6 cut(s)	447, 456, 545, 1250, 1479, 1787
BstDSI	CCRYGG	1 cut(s)	181
BstF5I	GGATG	7 cut(s)	165, 364, 744, 1101, 1147, 1291, 1610
BstHHI	GCGC	4 cut(s)	339, 654, 729, 1798
BstMAI	GTCTC	3 cut(s)	829, 1002, 1059
BstMWI	GCNNNNNNNGC	6 cut(s)	433, 461, 680, 689, 1228, 1844
BstNI	CCWGG	5 cut(s)	110, 473, 854, 881, 1898
BstNSI	RCATGY	1 cut(s)	1538
BstSCI	CCNGG	6 cut(s)	69, 108, 471, 852, 879, 1896
BstSFI	CTRYAG	1 cut(s)	628
BstSLI	GKGCMC	1 cut(s)	1397
BstV1I	GCAGC	6 cut(s)	163, 679, 1234, 1472, 1822, 1870
BstX2I	RGATCY	5 cut(s)	535, 645, 800, 865, 1445
BstYI	RGATCY	5 cut(s)	535, 645, 800, 865, 1445
BsuI	GTATCC	1 cut(s)	1336
BsuRI	GGCC	7 cut(s)	5, 61, 74, 186, 529, 674, 1395
BtgI	CCRYGG	1 cut(s)	181
BtrI	CACGTC	1 cut(s)	1687
BtsCI	GGATG	7 cut(s)	165, 364, 744, 1101, 1147, 1291, 1610
BtsIMutI	CAGTG	3 cut(s)	562, 642, 926
BveI	ACCTGC	1 cut(s)	1039
Cac8I	GCNNGC	4 cut(s)	149, 462, 963, 1458
CciI	TCATGA	1 cut(s)	247
CfoI	GCGC	4 cut(s)	339, 654, 729, 1798
Cfr13I	GGNCC	6 cut(s)	185, 673, 1393, 1394, 1775, 1894
CsiI	ACCWGGT	1 cut(s)	1896
Csp6I	GTAC	4 cut(s)	373, 468, 1029, 1432
CviAII	CATG	9 cut(s)	248, 279, 433, 887, 1244, 1376, 1535, 1799, 1820
CviQI	GTAC	4 cut(s)	373, 468, 1029, 1432
DdeI	CTNAG	6 cut(s)	447, 456, 545, 1250, 1479, 1787
DraI	TTTAAA	1 cut(s)	310
EaeI	YGGCCR	1 cut(s)	72
Eam1104I	CTCTTC	6 cut(s)	178, 408, 813, 875, 1644, 1660
EarI	CTCTTC	6 cut(s)	178, 408, 813, 875, 1644, 1660
EciI	GGCGGA	2 cut(s)	113, 187
Ecl136II	GAGCTC	1 cut(s)	1476
Eco130I	CCWWGG	4 cut(s)	354, 408, 602, 1329
Eco147I	AGGCCT	1 cut(s)	529
Eco24I	GRGCYC	2 cut(s)	1397, 1478
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	2 cut(s)	1775, 1894
Eco53kI	GAGCTC	1 cut(s)	1476
Eco57I	CTGAAG	3 cut(s)	552, 951, 1005
Eco72I	CACGTG	1 cut(s)	689
Eco88I	CYCGRG	1 cut(s)	1056
EcoICRI	GAGCTC	1 cut(s)	1476
EcoO109I	RGGNCCY	2 cut(s)	673, 1394
EcoRI	GAATTC	1 cut(s)	1312
EcoRII	CCWGG	5 cut(s)	108, 471, 852, 879, 1896
EcoT14I	CCWWGG	4 cut(s)	354, 408, 602, 1329
EcoT22I	ATGCAT	2 cut(s)	235, 438
EcoT38I	GRGCYC	2 cut(s)	1397, 1478
ErhI	CCWWGG	4 cut(s)	354, 408, 602, 1329
FaeI	CATG	9 cut(s)	251, 282, 436, 890, 1247, 1379, 1538, 1802, 1823
FalI	AAGNNNNNCTT	4 cut(s)	480, 512, 854, 886
FatI	CATG	9 cut(s)	247, 278, 432, 886, 1243, 1375, 1534, 1798, 1819
FauNDI	CATATG	3 cut(s)	1182, 1567, 1749
FbaI	TGATCA	2 cut(s)	207, 420
FblI	GTMKAC	1 cut(s)	1176
Fnu4HI	GCNGC	6 cut(s)	152, 693, 1223, 1461, 1836, 1859
FokI	GGATG	7 cut(s)	152, 371, 751, 1108, 1154, 1298, 1597
FriOI	GRGCYC	2 cut(s)	1397, 1478
Fsp4HI	GCNGC	6 cut(s)	152, 693, 1223, 1461, 1836, 1859
FspAI	RTGCGCAY	1 cut(s)	1797
FspBI	CTAG	2 cut(s)	1299, 1844
FspI	TGCGCA	3 cut(s)	338, 653, 1797
GlaI	GCGC	4 cut(s)	338, 653, 728, 1797
GluI	GCNGC	6 cut(s)	152, 693, 1223, 1461, 1836, 1859
GsaI	CCCAGC	1 cut(s)	55
GsuI	CTGGAG	2 cut(s)	902, 1028
HaeIII	GGCC	7 cut(s)	5, 61, 74, 186, 529, 674, 1395
HapII	CCGG	1 cut(s)	71
HhaI	GCGC	4 cut(s)	339, 654, 729, 1798
Hin1II	CATG	9 cut(s)	251, 282, 436, 890, 1247, 1379, 1538, 1802, 1823
Hin6I	GCGC	4 cut(s)	337, 652, 727, 1796
HinP1I	GCGC	4 cut(s)	337, 652, 727, 1796
HincII	GTYRAC	7 cut(s)	331, 389, 444, 933, 1177, 1373, 1684
HindII	GTYRAC	7 cut(s)	331, 389, 444, 933, 1177, 1373, 1684
HindIII	AAGCTT	1 cut(s)	1022
HinfI	GANTC	7 cut(s)	41, 84, 367, 1306, 1349, 1607, 1668
HpaII	CCGG	1 cut(s)	71
HphI	GGTGA	2 cut(s)	430, 1529
Hpy166II	GTNNAC	8 cut(s)	331, 389, 444, 933, 1177, 1373, 1672, 1684
Hpy8I	GTNNAC	8 cut(s)	331, 389, 444, 933, 1177, 1373, 1672, 1684
HpyAV	CCTTC	3 cut(s)	1180, 1265, 1796
HpyCH4III	ACNGT	6 cut(s)	377, 637, 930, 996, 1681, 1740
HpyCH4IV	ACGT	3 cut(s)	466, 688, 1686
HpyF10VI	GCNNNNNNNGC	6 cut(s)	433, 461, 680, 689, 1228, 1844
HpyF3I	CTNAG	6 cut(s)	447, 456, 545, 1250, 1479, 1787
HpySE526I	ACGT	3 cut(s)	466, 688, 1686
Hsp92II	CATG	9 cut(s)	251, 282, 436, 890, 1247, 1379, 1538, 1802, 1823
HspAI	GCGC	4 cut(s)	337, 652, 727, 1796
KpnI	GGTACC	1 cut(s)	1435
Ksp22I	TGATCA	2 cut(s)	207, 420
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	6 cut(s)	89, 159, 319, 883, 1047, 1423
Lsp1109I	GCAGC	6 cut(s)	163, 679, 1234, 1472, 1822, 1870
LweI	GCATC	3 cut(s)	220, 445, 1132
MabI	ACCWGGT	1 cut(s)	1896
MaeI	CTAG	2 cut(s)	1299, 1844
MaeII	ACGT	3 cut(s)	466, 688, 1686
MaeIII	GTNAC	3 cut(s)	595, 1205, 1740
MflI	RGATCY	5 cut(s)	535, 645, 800, 865, 1445
MhlI	GDGCHC	2 cut(s)	1397, 1478
MlyI	GAGTC	4 cut(s)	78, 1315, 1358, 1677
MmeI	TCCRAC	6 cut(s)	69, 120, 156, 648, 1248, 1688
Mph1103I	ATGCAT	2 cut(s)	235, 438
MroXI	GAANNNNTTC	1 cut(s)	1638
MseI	TTAA	5 cut(s)	309, 759, 1149, 1409, 1578
MslI	CAYNNNNRTG	3 cut(s)	1166, 1284, 1539
MspI	CCGG	1 cut(s)	71
MspR9I	CCNGG	6 cut(s)	71, 110, 473, 854, 881, 1898
MvaI	CCWGG	5 cut(s)	110, 473, 854, 881, 1898
MwoI	GCNNNNNNNGC	6 cut(s)	433, 461, 680, 689, 1228, 1844
NciI	CCSGG	1 cut(s)	71
NdeI	CATATG	3 cut(s)	1182, 1567, 1749
NlaIII	CATG	9 cut(s)	251, 282, 436, 890, 1247, 1379, 1538, 1802, 1823
NlaIV	GGNNCC	5 cut(s)	91, 1395, 1433, 1485, 1776
NmeAIII	GCCGAG	2 cut(s)	123, 1849
NmuCI	GTSAC	1 cut(s)	1740
NsbI	TGCGCA	3 cut(s)	338, 653, 1797
NsiI	ATGCAT	2 cut(s)	235, 438
NspI	RCATGY	1 cut(s)	1538
PagI	TCATGA	1 cut(s)	247
PaqCI	CACCTGC	1 cut(s)	1039
PceI	AGGCCT	1 cut(s)	529
PciI	ACATGT	1 cut(s)	1534
PciSI	GCTCTTC	1 cut(s)	813
PdmI	GAANNNNTTC	1 cut(s)	1638
PfeI	GAWTC	3 cut(s)	41, 367, 1607
PflMI	CCANNNNNTGG	1 cut(s)	880
PfoI	TCCNGGA	1 cut(s)	879
PkrI	GCNGC	6 cut(s)	153, 694, 1224, 1462, 1837, 1860
PleI	GAGTC	4 cut(s)	78, 1314, 1357, 1676
PmaCI	CACGTG	1 cut(s)	689
PmlI	CACGTG	1 cut(s)	689
PpsI	GAGTC	4 cut(s)	78, 1314, 1357, 1676
Ppu21I	YACGTR	2 cut(s)	467, 689
PscI	ACATGT	1 cut(s)	1534
Psp124BI	GAGCTC	1 cut(s)	1478
Psp6I	CCWGG	5 cut(s)	108, 471, 852, 879, 1896
PspCI	CACGTG	1 cut(s)	689
PspFI	CCCAGC	1 cut(s)	51
PspGI	CCWGG	5 cut(s)	108, 471, 852, 879, 1896
PspN4I	GGNNCC	5 cut(s)	91, 1395, 1433, 1485, 1776
PspOMI	GGGCCC	1 cut(s)	1393
PspPI	GGNCC	6 cut(s)	185, 673, 1393, 1394, 1775, 1894
PsuI	RGATCY	5 cut(s)	535, 645, 800, 865, 1445
RsaI	GTAC	4 cut(s)	374, 469, 1030, 1433
RsaNI	GTAC	4 cut(s)	373, 468, 1029, 1432
RseI	CAYNNNNRTG	3 cut(s)	1166, 1284, 1539
SacI	GAGCTC	1 cut(s)	1478
SalI	GTCGAC	1 cut(s)	1175
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	5 cut(s)	309, 759, 1149, 1409, 1578
SatI	GCNGC	6 cut(s)	152, 693, 1223, 1461, 1836, 1859
Sau96I	GGNCC	6 cut(s)	185, 673, 1393, 1394, 1775, 1894
SchI	GAGTC	4 cut(s)	78, 1315, 1358, 1677
ScrFI	CCNGG	6 cut(s)	71, 110, 473, 854, 881, 1898
SduI	GDGCHC	2 cut(s)	1397, 1478
SexAI	ACCWGGT	1 cut(s)	1896
SfaNI	GCATC	3 cut(s)	220, 445, 1132
SfcI	CTRYAG	1 cut(s)	628
SinI	GGWCC	2 cut(s)	1775, 1894
SmiMI	CAYNNNNRTG	3 cut(s)	1166, 1284, 1539
SmlI	CTYRAG	3 cut(s)	477, 641, 838
SmoI	CTYRAG	3 cut(s)	477, 641, 838
SseBI	AGGCCT	1 cut(s)	529
SsiI	CCGC	3 cut(s)	124, 198, 1435
SspI	AATATT	1 cut(s)	1576
SspMI	CTAG	2 cut(s)	1299, 1844
SstI	GAGCTC	1 cut(s)	1478
StuI	AGGCCT	1 cut(s)	529
StyD4I	CCNGG	6 cut(s)	69, 108, 471, 852, 879, 1896
StyI	CCWWGG	4 cut(s)	354, 408, 602, 1329
TaaI	ACNGT	6 cut(s)	377, 637, 930, 996, 1681, 1740
TaiI	ACGT	3 cut(s)	469, 691, 1689
TfiI	GAWTC	3 cut(s)	41, 367, 1607
Tru1I	TTAA	5 cut(s)	309, 759, 1149, 1409, 1578
Tru9I	TTAA	5 cut(s)	309, 759, 1149, 1409, 1578
TscAI	CASTG	3 cut(s)	562, 642, 933
TseFI	GTSAC	1 cut(s)	1740
TseI	GCWGC	6 cut(s)	151, 692, 1222, 1460, 1835, 1858
Tsp45I	GTSAC	1 cut(s)	1740
TspGWI	ACGGA	1 cut(s)	170
TspRI	CASTG	3 cut(s)	562, 642, 933
Van91I	CCANNNNNTGG	1 cut(s)	880
VpaK11BI	GGWCC	2 cut(s)	1775, 1894
XapI	RAATTY	5 cut(s)	890, 939, 947, 1312, 1782
XceI	RCATGY	1 cut(s)	1538
XmiI	GTMKAC	1 cut(s)	1176
XmnI	GAANNNNTTC	1 cut(s)	1638
XspI	CTAG	2 cut(s)	1299, 1844
Zsp2I	ATGCAT	2 cut(s)	235, 438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.