RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| eIF3a_PCI_TPR-like | PF22591 | 8 - 109 | 1.8e-33 | eIF3a, PCI domain, TPR-like region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 182 |
| AciI | CCGC | 1 cut(s) | 220 |
| AcsI | RAATTY | 1 cut(s) | 7 |
| AfaI | GTAC | 2 cut(s) | 218, 313 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 111 |
| AgsI | TTSAA | 3 cut(s) | 34, 82, 140 |
| AluBI | AGCT | 3 cut(s) | 166, 249, 299 |
| AluI | AGCT | 3 cut(s) | 166, 249, 299 |
| Ama87I | CYCGRG | 1 cut(s) | 20 |
| ApoI | RAATTY | 1 cut(s) | 7 |
| AspLEI | GCGC | 1 cut(s) | 183 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| AvaI | CYCGRG | 1 cut(s) | 20 |
| BccI | CCATC | 2 cut(s) | 117, 197 |
| BclI | TGATCA | 1 cut(s) | 51 |
| BfaI | CTAG | 1 cut(s) | 117 |
| BlpI | GCTNAGC | 1 cut(s) | 300 |
| BmeT110I | CYCGRG | 1 cut(s) | 20 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 300 |
| BsaJI | CCNNGG | 2 cut(s) | 198, 252 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseDI | CCNNGG | 2 cut(s) | 198, 252 |
| BseGI | GGATG | 2 cut(s) | 128, 208 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseMII | CTCAG | 2 cut(s) | 291, 305 |
| BsiHKCI | CYCGRG | 1 cut(s) | 20 |
| BslFI | GGGAC | 1 cut(s) | 335 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BsmFI | GGGAC | 1 cut(s) | 335 |
| BsmI | GAATGC | 1 cut(s) | 31 |
| BsoBI | CYCGRG | 1 cut(s) | 20 |
| Bsp143I | GATC | 1 cut(s) | 51 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 300 |
| BspACI | CCGC | 1 cut(s) | 220 |
| BspCNI | CTCAG | 2 cut(s) | 292, 304 |
| BspHI | TCATGA | 1 cut(s) | 276 |
| BssECI | CCNNGG | 2 cut(s) | 198, 252 |
| BssMI | GATC | 1 cut(s) | 51 |
| BssT1I | CCWWGG | 2 cut(s) | 198, 252 |
| Bst6I | CTCTTC | 3 cut(s) | 39, 93, 252 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 306 |
| BstDEI | CTNAG | 2 cut(s) | 291, 300 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 109 |
| BstF5I | GGATG | 2 cut(s) | 128, 208 |
| BstHHI | GCGC | 1 cut(s) | 183 |
| BstKTI | GATC | 1 cut(s) | 54 |
| BstMBI | GATC | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 305 |
| BtsCI | GGATG | 2 cut(s) | 128, 208 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 306 |
| CciI | TCATGA | 1 cut(s) | 276 |
| CfoI | GCGC | 1 cut(s) | 183 |
| Csp6I | GTAC | 2 cut(s) | 217, 312 |
| CviAII | CATG | 1 cut(s) | 277 |
| CviJI | RGCY | 4 cut(s) | 166, 249, 299, 308 |
| CviKI_1 | RGCY | 4 cut(s) | 166, 249, 299, 308 |
| CviQI | GTAC | 2 cut(s) | 217, 312 |
| DdeI | CTNAG | 2 cut(s) | 291, 300 |
| DpnI | GATC | 1 cut(s) | 53 |
| DpnII | GATC | 1 cut(s) | 51 |
| DraI | TTTAAA | 1 cut(s) | 154 |
| Eam1104I | CTCTTC | 3 cut(s) | 39, 93, 252 |
| EarI | CTCTTC | 3 cut(s) | 39, 93, 252 |
| Eco130I | CCWWGG | 2 cut(s) | 198, 252 |
| Eco88I | CYCGRG | 1 cut(s) | 20 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 2 cut(s) | 198, 252 |
| ErhI | CCWWGG | 2 cut(s) | 198, 252 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 6 cut(s) | 93, 149, 159, 278, 341, 361 |
| FaqI | GGGAC | 1 cut(s) | 335 |
| FatI | CATG | 1 cut(s) | 276 |
| FbaI | TGATCA | 1 cut(s) | 51 |
| FokI | GGATG | 2 cut(s) | 135, 215 |
| FspBI | CTAG | 1 cut(s) | 117 |
| FspI | TGCGCA | 1 cut(s) | 182 |
| GlaI | GCGC | 1 cut(s) | 182 |
| HhaI | GCGC | 1 cut(s) | 183 |
| Hin1II | CATG | 1 cut(s) | 280 |
| Hin6I | GCGC | 1 cut(s) | 181 |
| HinP1I | GCGC | 1 cut(s) | 181 |
| HincII | GTYRAC | 1 cut(s) | 233 |
| HindII | GTYRAC | 1 cut(s) | 233 |
| HinfI | GANTC | 3 cut(s) | 16, 280, 348 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy166II | GTNNAC | 1 cut(s) | 233 |
| Hpy188I | TCNGA | 2 cut(s) | 210, 294 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 117, 277, 317, 352 |
| Hpy8I | GTNNAC | 1 cut(s) | 233 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 305 |
| HpyF3I | CTNAG | 2 cut(s) | 291, 300 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| HspAI | GCGC | 1 cut(s) | 181 |
| Ksp22I | TGATCA | 1 cut(s) | 51 |
| Kzo9I | GATC | 1 cut(s) | 51 |
| LmnI | GCTCC | 1 cut(s) | 254 |
| LpnPI | CCDG | 3 cut(s) | 290, 294, 302 |
| MaeI | CTAG | 1 cut(s) | 117 |
| MalI | GATC | 1 cut(s) | 53 |
| MboI | GATC | 1 cut(s) | 51 |
| MboII | GAAGA | 4 cut(s) | 56, 80, 269, 332 |
| MluCI | AATT | 1 cut(s) | 7 |
| MlyI | GAGTC | 1 cut(s) | 357 |
| MnlI | CCTC | 5 cut(s) | 67, 105, 113, 115, 253 |
| MseI | TTAA | 3 cut(s) | 153, 213, 330 |
| Mva1269I | GAATGC | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 305 |
| NdeII | GATC | 1 cut(s) | 51 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NsbI | TGCGCA | 1 cut(s) | 182 |
| PagI | TCATGA | 1 cut(s) | 276 |
| PctI | GAATGC | 1 cut(s) | 31 |
| PfeI | GAWTC | 2 cut(s) | 16, 280 |
| PleI | GAGTC | 1 cut(s) | 356 |
| PpsI | GAGTC | 1 cut(s) | 356 |
| RsaI | GTAC | 2 cut(s) | 218, 313 |
| RsaNI | GTAC | 2 cut(s) | 217, 312 |
| SaqAI | TTAA | 3 cut(s) | 153, 213, 330 |
| Sau3AI | GATC | 1 cut(s) | 51 |
| SchI | GAGTC | 1 cut(s) | 357 |
| SetI | ASST | 7 cut(s) | 107, 116, 146, 168, 251, 264, 301 |
| Sse9I | AATT | 1 cut(s) | 7 |
| SsiI | CCGC | 1 cut(s) | 220 |
| SspMI | CTAG | 1 cut(s) | 117 |
| StyI | CCWWGG | 2 cut(s) | 198, 252 |
| TasI | AATT | 1 cut(s) | 7 |
| TfiI | GAWTC | 2 cut(s) | 16, 280 |
| Tru1I | TTAA | 3 cut(s) | 153, 213, 330 |
| Tru9I | TTAA | 3 cut(s) | 153, 213, 330 |
| TspDTI | ATGAA | 3 cut(s) | 80, 265, 293 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 109 |
| XapI | RAATTY | 1 cut(s) | 7 |
| XbaI | TCTAGA | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 117 |