RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| eIF3a_PCI_TPR-like | PF22591 | 29 - 112 | 9.8e-18 | eIF3a, PCI domain, TPR-like region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 138 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AfaI | GTAC | 2 cut(s) | 173, 268 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 65 |
| AgsI | TTSAA | 1 cut(s) | 8 |
| AluBI | AGCT | 4 cut(s) | 121, 204, 254, 336 |
| AluI | AGCT | 4 cut(s) | 121, 204, 254, 336 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AspLEI | GCGC | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 1 cut(s) | 48 |
| BccI | CCATC | 2 cut(s) | 71, 152 |
| BfaI | CTAG | 1 cut(s) | 71 |
| BlpI | GCTNAGC | 1 cut(s) | 255 |
| BpmI | CTGGAG | 1 cut(s) | 255 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 255 |
| BpuEI | CTTGAG | 1 cut(s) | 45 |
| BsaJI | CCNNGG | 2 cut(s) | 153, 207 |
| BsaWI | WCCGGW | 1 cut(s) | 174 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 65 |
| Bse3DI | GCAATG | 1 cut(s) | 31 |
| BseDI | CCNNGG | 2 cut(s) | 153, 207 |
| BseGI | GGATG | 2 cut(s) | 82, 163 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseMI | GCAATG | 1 cut(s) | 31 |
| BseMII | CTCAG | 2 cut(s) | 246, 260 |
| Bsh1236I | CGCG | 1 cut(s) | 138 |
| BsiSI | CCGG | 1 cut(s) | 175 |
| BslFI | GGGAC | 1 cut(s) | 300 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BsmFI | GGGAC | 1 cut(s) | 300 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 255 |
| BspCNI | CTCAG | 2 cut(s) | 247, 259 |
| BspFNI | CGCG | 1 cut(s) | 138 |
| BspHI | TCATGA | 1 cut(s) | 231 |
| BsrDI | GCAATG | 1 cut(s) | 31 |
| BssECI | CCNNGG | 2 cut(s) | 153, 207 |
| BssT1I | CCWWGG | 2 cut(s) | 153, 207 |
| Bst6I | CTCTTC | 2 cut(s) | 47, 207 |
| BstC8I | GCNNGC | 2 cut(s) | 13, 261 |
| BstDEI | CTNAG | 2 cut(s) | 246, 255 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 63 |
| BstF5I | GGATG | 2 cut(s) | 82, 163 |
| BstFNI | CGCG | 1 cut(s) | 138 |
| BstHHI | GCGC | 1 cut(s) | 138 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 21, 260 |
| BstUI | CGCG | 1 cut(s) | 138 |
| BtsCI | GGATG | 2 cut(s) | 82, 163 |
| Cac8I | GCNNGC | 2 cut(s) | 13, 261 |
| CciI | TCATGA | 1 cut(s) | 231 |
| CfoI | GCGC | 1 cut(s) | 138 |
| Csp6I | GTAC | 2 cut(s) | 172, 267 |
| CviAII | CATG | 1 cut(s) | 232 |
| CviJI | RGCY | 6 cut(s) | 121, 204, 254, 263, 305, 336 |
| CviKI_1 | RGCY | 6 cut(s) | 121, 204, 254, 263, 305, 336 |
| CviQI | GTAC | 2 cut(s) | 172, 267 |
| DdeI | CTNAG | 2 cut(s) | 246, 255 |
| DraI | TTTAAA | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 2 cut(s) | 47, 207 |
| EarI | CTCTTC | 2 cut(s) | 47, 207 |
| Eco130I | CCWWGG | 2 cut(s) | 153, 207 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 63 |
| EcoT14I | CCWWGG | 2 cut(s) | 153, 207 |
| ErhI | CCWWGG | 2 cut(s) | 153, 207 |
| FaeI | CATG | 1 cut(s) | 235 |
| FaiI | YATR | 7 cut(s) | 47, 104, 114, 184, 233, 326, 339 |
| FaqI | GGGAC | 1 cut(s) | 300 |
| FatI | CATG | 1 cut(s) | 231 |
| FokI | GGATG | 2 cut(s) | 89, 170 |
| FspBI | CTAG | 1 cut(s) | 71 |
| GlaI | GCGC | 1 cut(s) | 137 |
| GsuI | CTGGAG | 1 cut(s) | 255 |
| HapII | CCGG | 1 cut(s) | 175 |
| HhaI | GCGC | 1 cut(s) | 138 |
| Hin1II | CATG | 1 cut(s) | 235 |
| Hin6I | GCGC | 1 cut(s) | 136 |
| HinP1I | GCGC | 1 cut(s) | 136 |
| HincII | GTYRAC | 1 cut(s) | 188 |
| HindII | GTYRAC | 1 cut(s) | 188 |
| HinfI | GANTC | 2 cut(s) | 235, 313 |
| HpaII | CCGG | 1 cut(s) | 175 |
| HphI | GGTGA | 1 cut(s) | 48 |
| Hpy166II | GTNNAC | 1 cut(s) | 188 |
| Hpy188I | TCNGA | 2 cut(s) | 94, 249 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 232, 272, 317 |
| Hpy8I | GTNNAC | 1 cut(s) | 188 |
| HpyCH4V | TGCA | 1 cut(s) | 36 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 21, 260 |
| HpyF3I | CTNAG | 2 cut(s) | 246, 255 |
| Hsp92II | CATG | 1 cut(s) | 235 |
| HspAI | GCGC | 1 cut(s) | 136 |
| LmnI | GCTCC | 1 cut(s) | 209 |
| LpnPI | CCDG | 4 cut(s) | 188, 245, 249, 285 |
| MaeI | CTAG | 1 cut(s) | 71 |
| MboII | GAAGA | 5 cut(s) | 30, 34, 224, 287, 332 |
| MluCI | AATT | 2 cut(s) | 165, 178 |
| MlyI | GAGTC | 2 cut(s) | 229, 322 |
| MnlI | CCTC | 6 cut(s) | 21, 59, 67, 69, 133, 208 |
| MseI | TTAA | 4 cut(s) | 108, 168, 285, 291 |
| MspI | CCGG | 1 cut(s) | 175 |
| MvnI | CGCG | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 21, 260 |
| NlaIII | CATG | 1 cut(s) | 235 |
| PagI | TCATGA | 1 cut(s) | 231 |
| PleI | GAGTC | 2 cut(s) | 229, 321 |
| PpsI | GAGTC | 2 cut(s) | 229, 321 |
| RsaI | GTAC | 2 cut(s) | 173, 268 |
| RsaNI | GTAC | 2 cut(s) | 172, 267 |
| SaqAI | TTAA | 4 cut(s) | 108, 168, 285, 291 |
| SchI | GAGTC | 2 cut(s) | 229, 322 |
| SetI | ASST | 7 cut(s) | 61, 70, 123, 206, 219, 256, 338 |
| SmlI | CTYRAG | 1 cut(s) | 60 |
| SmoI | CTYRAG | 1 cut(s) | 60 |
| Sse9I | AATT | 2 cut(s) | 165, 178 |
| SspMI | CTAG | 1 cut(s) | 71 |
| StyI | CCWWGG | 2 cut(s) | 153, 207 |
| TaqI | TCGA | 1 cut(s) | 300 |
| TasI | AATT | 2 cut(s) | 165, 178 |
| Tru1I | TTAA | 4 cut(s) | 108, 168, 285, 291 |
| Tru9I | TTAA | 4 cut(s) | 108, 168, 285, 291 |
| TspDTI | ATGAA | 3 cut(s) | 34, 220, 309 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 63 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XbaI | TCTAGA | 1 cut(s) | 70 |
| XspI | CTAG | 1 cut(s) | 71 |