Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001063

Physical Location & Seq

Genomic Coordinates Reverse (-)

82441404 .. 82450927

Gene Structure 9524 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G047630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGAGAATTTTGCGAAACCGGAAAATGCTTTGAAGCTAGCTGAAGAGTTGATCAATGTTGGGCAGAAGCAAGATGCATTGCAATCGCTTCATGATCTTATTACATCAAAGAGATATAGAGCATGGCAGAAGCCACTTGAAAAAATTATGTTTAAATATGTGGAGCTTTGTGTTGACTTGCGCAAGGGTAGATTTGCCAAGGATGGTCTGATTCAGTACCGTATTATATGTCAACAAGTAAATGTCAGTTCCTTGGAAGAGGTGATCAAGCACTTCATGCATCTGTCAACTGAGAAAGCTGAGCAGGCACGTACCCAGGCTCAAGCATTAGAAGAAGCACTTGATGTTGATGACCTCGAAGCAGATAAGAGGCCTGAAGATCTAATGCTGAGTTATGTCAGTGGAGAGAAAGGAAAAGATAGGTCTGATCGTGAAGTTGTTACTCCTTGGTTCAAGTTTTTGTGGGAAACCTACAGAACAGTGCTTGAGATCTTGCGCAACAACTCAAAGTTGGAGGCCCTTTATGCGATGACGGCACATCGAGCCTTTCAGTTCTGCAAGCAATACAAACGAACTACGGAGTTTCGAAGGTTATGTGAAATCATCAGGAATCATCTGGCTAATCTGAACAAGTATAGAGATCAAAGAGACCGACCTGACCTATCTGCACCTGAGAGCTTGCAACTGTATCTTGATACTAGATTTGAGCAGCTGAAGATAGCTACTGAACTTGAACTGTGGCAGGAAGCGTTCCGCTCTGTTGAAGATATTCATGGATTGATGTGCATGGTTAAGAAAACCCCTAAACCATCGTTGATGGTGGTTTACTATGCGAAGCTCACAGAAATTTTTTGGATTTCTGCTAGCCACCTTAATCATGCTTATGCATGGTTCAAGCTATTCTCGCTTCAGAAAAGCTTTAACAAAAACTTAAGCCAGAAGGATTTGCAGTTAATAGCATCATCTGTTGTCTTGGCTGCACTTTCAGTTCCCCCCTATGATCAGACACGTGCTGCCTCTCACTTGGAACTTGAAAATGAGAAAGAGCGCAATTTGAGGATGGCTAATCTAATTGGCTTTAATCTTGACCCCAAAATCGACAGAGGAGATGTGCTTTCAAGATCTGCTCTTCTATCAGAACTGTTTGATAATTCAACTCAATCTCCATCACTTGTAGGTCAACATGAAGTTCTTGCTTCGGGCCCTATCGAGGATTTAATCGCTCATCGGGAGCATAGGTACCGCATTTCTGGATCTTCTTTGCTTGCAGCTATGGATCAGAGCTCTCAGGTTCCTTATGCAGATGTCTTATCTGTCCAGTCTGGTGATTTTACTCCTACACATGTAGATGATAAAGAGCAGAGTGATGGTTCATATCAGATGAGAGAAGTGGAAGAGTCCACCCAACTATTGACAGAGGGTCCAGAAATTCTAAGAAGTGCGCATGAAGGCAGTTCAAGTGGTCATGCCGAGTCATTAGCTGCAACACTAGCTGAACATCAGCAGCACTTGGTTCTCATTAATCAACTGAAGGAAGTTGCTCCAGCAATACAAAAGTCAATATCAGAACAGATTTGCCTTCGTAGCATGTTGGTTTATTTCCTGCTGGAGTCGATTTCCCTAAATCACCGACTGAACCTCCGGCCGGGCTTTTTAACGGTAGATGTTATCGTTAAAGACCACCGAGTGTTCTTTCAGCGACGCCTCAGTCAATCCATACTGACTGAAGCTGCAACTATGGATACCATCTCTGATGAGGATGAAGAACAGATTGCGCTTGGACAAGCGGTAATATTTATATCAGCATATGGTTTCGATCAAATTGTTTGGTATAGGAATGCTTCTTTAAGACTGCATAAGCTTAGCCTTCTTATGTGTTGGAGCATGGTCTTCACTAAATCACTTGCCAAATTGTTCAAGACTTTGAAATTCTTACCTCAGAAATTTTTATATTTGTTGCTTTATTGTTGCTCAAAAGAAGGTTACCGAAAAACCAGAACAAAGAGGGAAACATCTTATTCATTACCAGTTACAAGGGTCGGTTGTAAAGCCCATATGAGTTGCTATCGTCAAAGCAACGGAAAATTCAAGACTGTGTCGTTTGATACAAATCACAATCATGAGTTGATTAAAACACCTATGAAGCATATGGCAAAAAGCAGCTGGGAAGTTGAAGATATGCAGAAAATTACTTCTTTTTTTTTGTTGAATTGTGTTAGTGCCATTTATAGGAAAATTCTACAATCTTCTTATTCGACAATTTGCACACACGTGCTTCTGCCAGTCTCATCACATCCATGGTTGCTAGCACGCCACTTTGGTACATCTCTTGGGCTCCTGCATAATAATACATTCACAAGAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001732 GO:0002181 GO:0002183 GO:0002188 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005852 GO:0005886 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0043614 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0071540 GO:0071541 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PCI

Protein Analysis

788

Amino Acids

90.73

Weight (kDa)

8.36

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF3a_PCI_TPR-like	PF22591	8 - 365	4.2e-131	eIF3a, PCI domain, TPR-like region
FAR1	PF03101	654 - 710	1.1e-11	FAR1 DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11420
fragaria_vesca	FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021
malus_domestica	MD04G1196800.v1.1 MD12G1209700.v1.1
prunus_persica	Prupe.6G317100_v2.0.a1 Prupe.6G317100_v2.0.a1
pyrus_communis	pycom04g17400 pycom12g19700
rosa_chinensis	RchiOBHm_Chr2g0109021 RchiOBHm_Chr3g0456551 RchiOBHm_Chr5g0047251 RchiOBHm_Chr6g0248701
rosa_laevigata	RLG00000025294 RLG00000028631
rosa_multiflora	Rmu_sc0000361.1_g000030 Rmu_sc0000670.1_g000004 Rmu_sc0000955.1_g000029 Rmu_sc0002045.1_g000025 Rmu_sc0002607.1_g000004 Rmu_sc0005473.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037410 Rroxscaffold_2G00104310 Rroxscaffold_3G00230480 Rroxscaffold_3G00256140 Rroxscaffold_6G00422630
rosa_rugosa	Rorug03G0013900 Rorug04G0204200
rosa_samantha	Rh1BG180500 Rh1DG210500 Rh2CG210900 Rh2DG107300 Rh2DG455500 Rh3AG074600 Rh3AG217800 Rh3BG076300 Rh3CG076000 Rh3DG078100 Rh4AG261300 Rh4BG267100 Rh4DG188600 Rh4DG191400 Rh4DG263400 Rh5BG322700 Rh5BG536200 Rh5BG542500 Rh5CG559400 Rh5CG565100 Rh5DG333700 Rh5DG412500 Rh6AG116300 Rh6BG110500 Rh6CG264500
rosa_wichuraiana	Rw3G006380 Rw5G047630 Rw6G003410 Rw6G025160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1707
Acc16I	TGCGCA	3 cut(s)	182, 497, 1443
Acc65I	GGTACC	1 cut(s)	1239
AccB1I	GGYRCC	1 cut(s)	1239
AccBSI	CCGCTC	1 cut(s)	756
AciI	CCGC	3 cut(s)	754, 1243, 1787
AclWI	GGATC	2 cut(s)	1261, 1284
AcoI	YGGCCR	1 cut(s)	1643
AcsI	RAATTY	7 cut(s)	7, 846, 1428, 1928, 1943, 2084, 2235
AcuI	CTGAAG	6 cut(s)	63, 396, 734, 893, 1550, 1746
AcvI	CACGTG	2 cut(s)	1010, 2272
AcyI	GRCGYC	1 cut(s)	1702
AdeI	CACNNNGTG	1 cut(s)	1687
AfaI	GTAC	4 cut(s)	218, 313, 1241, 2323
AfiI	CCNNNNNNNGG	3 cut(s)	1210, 1645, 2229
AflII	CTTAAG	1 cut(s)	931
AflIII	ACRYGT	3 cut(s)	1007, 1342, 2269
AhdI	GACNNNNNGTC	1 cut(s)	1419
AjnI	CCWGG	1 cut(s)	315
AleI	CACNNNNGTG	1 cut(s)	2270
Alw21I	GWGCWC	1 cut(s)	1286
Alw26I	GTCTC	2 cut(s)	642, 2290
AlwI	GGATC	2 cut(s)	1261, 1284
AoxI	GGCC	4 cut(s)	371, 516, 1201, 1643
ApaI	GGGCCC	1 cut(s)	1205
ApeKI	GCWGC	8 cut(s)	709, 977, 1013, 1268, 1481, 1504, 1730, 2160
ApoI	RAATTY	7 cut(s)	7, 846, 1428, 1928, 1943, 2084, 2235
AseI	ATTAAT	1 cut(s)	1521
Asp700I	GAANNNNTTC	1 cut(s)	768
Asp718I	GGTACC	1 cut(s)	1239
AspLEI	GCGC	5 cut(s)	183, 498, 1050, 1444, 1777
AspS9I	GGNCC	4 cut(s)	517, 1201, 1202, 1421
AsuC2I	CCSGG	1 cut(s)	1647
AsuHPI	GGTGA	3 cut(s)	274, 1337, 1619
AsuII	TTCGAA	1 cut(s)	586
AsuNHI	GCTAGC	3 cut(s)	37, 863, 2305
AvaII	GGWCC	1 cut(s)	1421
BaeGI	GKGCMC	1 cut(s)	1205
BanI	GGYRCC	1 cut(s)	1239
BanII	GRGCYC	3 cut(s)	1205, 1286, 2337
BbrPI	CACGTG	2 cut(s)	1010, 2272
BbsI	GAAGAC	1 cut(s)	1882
Bbv12I	GWGCWC	1 cut(s)	1286
BbvI	GCAGC	8 cut(s)	721, 964, 1000, 1280, 1468, 1516, 1717, 2172
BccI	CCATC	7 cut(s)	197, 811, 817, 1054, 1174, 1361, 1754
BceAI	ACGGC	1 cut(s)	549
BcgI	CGANNNNNNTGC	2 cut(s)	66, 100
BciT130I	CCWGG	1 cut(s)	317
BciVI	GTATCC	1 cut(s)	1735
BclI	TGATCA	3 cut(s)	51, 264, 1000
BcnI	CCSGG	1 cut(s)	1647
BcoDI	GTCTC	2 cut(s)	642, 2290
BfaI	CTAG	5 cut(s)	38, 699, 864, 1490, 2306
BfmI	CTRYAG	1 cut(s)	472
BfrI	CTTAAG	1 cut(s)	931
BfuI	GTATCC	1 cut(s)	1735
BglII	AGATCT	3 cut(s)	379, 489, 1121
BisI	GCNGC	8 cut(s)	710, 978, 1014, 1269, 1482, 1505, 1731, 2161
BlpI	GCTNAGC	2 cut(s)	300, 1862
BlsI	GCNGC	8 cut(s)	711, 979, 1015, 1270, 1483, 1506, 1732, 2162
Bme1390I	CCNGG	2 cut(s)	317, 1647
Bme18I	GGWCC	1 cut(s)	1421
BmeRI	GACNNNNNGTC	1 cut(s)	1419
BmgT120I	GGNCC	4 cut(s)	517, 1201, 1202, 1421
BmiI	GGNNCC	5 cut(s)	1203, 1241, 1293, 1422, 2336
BmrFI	CCNGG	2 cut(s)	317, 1647
BmsI	GCATC	3 cut(s)	64, 289, 968
BmtI	GCTAGC	3 cut(s)	41, 867, 2309
BpiI	GAAGAC	1 cut(s)	1882
BpmI	CTGGAG	2 cut(s)	1527, 1628
Bpu1102I	GCTNAGC	2 cut(s)	300, 1862
Bpu14I	TTCGAA	1 cut(s)	586
BpuEI	CTTGAG	2 cut(s)	306, 506
BpuMI	CCSGG	1 cut(s)	1647
BsaAI	YACGTR	3 cut(s)	311, 1010, 2272
BsaBI	GATNNNNATC	1 cut(s)	2109
BsaHI	GRCGYC	1 cut(s)	1702
BsaI	GGTCTC	1 cut(s)	642
BsaJI	CCNNGG	5 cut(s)	198, 252, 315, 446, 2297
BsaWI	WCCGGW	1 cut(s)	19
BsaXI	ACNNNNNCTCC	6 cut(s)	1147, 1177, 1223, 1253, 1623, 1653
Bsc4I	CCNNNNNNNGG	3 cut(s)	1210, 1645, 2229
Bse1I	ACTGG	3 cut(s)	1318, 2027, 2282
Bse3DI	GCAATG	1 cut(s)	77
Bse8I	GATNNNNATC	1 cut(s)	2109
BseBI	CCWGG	1 cut(s)	317
BseDI	CCNNGG	5 cut(s)	198, 252, 315, 446, 2297
BseGI	GGATG	4 cut(s)	208, 1065, 1765, 2293
BseJI	GATNNNNATC	1 cut(s)	2109
BseLI	CCNNNNNNNGG	3 cut(s)	1210, 1645, 2229
BseMI	GCAATG	1 cut(s)	77
BseMII	CTCAG	7 cut(s)	282, 291, 380, 663, 1301, 1720, 1952
BseNI	ACTGG	3 cut(s)	1318, 2027, 2282
BseRI	GAGGAG	1 cut(s)	1119
BseSI	GKGCMC	1 cut(s)	1205
BseX3I	CGGCCG	1 cut(s)	1643
BseXI	GCAGC	8 cut(s)	721, 964, 1000, 1280, 1468, 1516, 1717, 2172
BseYI	CCCAGC	1 cut(s)	2163
BsgI	GTGCAG	2 cut(s)	651, 963
Bsh1285I	CGRYCG	1 cut(s)	1646
BshFI	GGCC	4 cut(s)	373, 518, 1203, 1645
BshNI	GGYRCC	1 cut(s)	1239
BsiEI	CGRYCG	1 cut(s)	1646
BsiHKAI	GWGCWC	1 cut(s)	1286
BsiSI	CCGG	3 cut(s)	20, 1642, 1646
BslI	CCNNNNNNNGG	3 cut(s)	1210, 1645, 2229
BsmAI	GTCTC	2 cut(s)	642, 2290
BsmI	GAATGC	1 cut(s)	1843
BsnI	GGCC	4 cut(s)	373, 518, 1203, 1645
Bso31I	GGTCTC	1 cut(s)	642
Bsp119I	TTCGAA	1 cut(s)	586
Bsp120I	GGGCCC	1 cut(s)	1201
Bsp1286I	GDGCHC	3 cut(s)	1205, 1286, 2337
Bsp1720I	GCTNAGC	2 cut(s)	300, 1862
Bsp19I	CCATGG	1 cut(s)	2297
BspACI	CCGC	3 cut(s)	754, 1243, 1787
BspANI	GGCC	4 cut(s)	373, 518, 1203, 1645
BspCNI	CTCAG	7 cut(s)	283, 292, 381, 664, 1300, 1719, 1951
BspHI	TCATGA	2 cut(s)	91, 2119
BspLI	GGNNCC	5 cut(s)	1203, 1241, 1293, 1422, 2336
BspOI	GCTAGC	3 cut(s)	41, 867, 2309
BspPI	GGATC	2 cut(s)	1261, 1284
BspQI	GCTCTTC	1 cut(s)	1134
BspT104I	TTCGAA	1 cut(s)	586
BspT107I	GGYRCC	1 cut(s)	1239
BspTI	CTTAAG	1 cut(s)	931
BspTNI	GGTCTC	1 cut(s)	642
BsrBI	CCGCTC	1 cut(s)	756
BsrDI	GCAATG	1 cut(s)	77
BsrI	ACTGG	3 cut(s)	1318, 2027, 2282
BssECI	CCNNGG	5 cut(s)	198, 252, 315, 446, 2297
BssNI	GRCGYC	1 cut(s)	1702
BssT1I	CCWWGG	4 cut(s)	198, 252, 446, 2297
Bst2UI	CCWGG	1 cut(s)	317
Bst4CI	ACNGT	7 cut(s)	221, 481, 687, 738, 1143, 1660, 2095
Bst6I	CTCTTC	4 cut(s)	39, 252, 1134, 1389
BstACI	GRCGYC	1 cut(s)	1702
BstAFI	CTTAAG	1 cut(s)	931
BstAPI	GCANNNNNTGC	1 cut(s)	277
BstBAI	YACGTR	3 cut(s)	311, 1010, 2272
BstBI	TTCGAA	1 cut(s)	586
BstC8I	GCNNGC	8 cut(s)	39, 306, 560, 680, 865, 1266, 2307, 2311
BstDEI	CTNAG	9 cut(s)	291, 300, 389, 672, 1287, 1433, 1706, 1862, 1938
BstDSI	CCRYGG	1 cut(s)	2297
BstEII	GGTNACC	1 cut(s)	1982
BstF5I	GGATG	4 cut(s)	208, 1065, 1765, 2293
BstHHI	GCGC	5 cut(s)	183, 498, 1050, 1444, 1777
BstMAI	GTCTC	2 cut(s)	642, 2290
BstMCI	CGRYCG	1 cut(s)	1646
BstMWI	GCNNNNNNNGC	8 cut(s)	277, 305, 524, 533, 542, 904, 1490, 1584
BstNI	CCWGG	1 cut(s)	317
BstNSI	RCATGY	2 cut(s)	1346, 1591
BstPI	GGTNACC	1 cut(s)	1982
BstSCI	CCNGG	2 cut(s)	315, 1645
BstSFI	CTRYAG	1 cut(s)	472
BstSLI	GKGCMC	1 cut(s)	1205
BstV1I	GCAGC	8 cut(s)	721, 964, 1000, 1280, 1468, 1516, 1717, 2172
BstV2I	GAAGAC	1 cut(s)	1882
BstX2I	RGATCY	4 cut(s)	379, 489, 1121, 1253
BstYI	RGATCY	4 cut(s)	379, 489, 1121, 1253
BstZI	CGGCCG	1 cut(s)	1643
BsuI	GTATCC	1 cut(s)	1735
BsuRI	GGCC	4 cut(s)	373, 518, 1203, 1645
BtgI	CCRYGG	1 cut(s)	2297
BtgZI	GCGATG	1 cut(s)	542
BtsCI	GGATG	4 cut(s)	208, 1065, 1765, 2293
BtsIMutI	CAGTG	2 cut(s)	406, 486
Cac8I	GCNNGC	8 cut(s)	39, 306, 560, 680, 865, 1266, 2307, 2311
CciI	TCATGA	2 cut(s)	91, 2119
CfoI	GCGC	5 cut(s)	183, 498, 1050, 1444, 1777
Cfr13I	GGNCC	4 cut(s)	517, 1201, 1202, 1421
CseI	GACGC	1 cut(s)	1710
Csp6I	GTAC	4 cut(s)	217, 312, 1240, 2322
CviQI	GTAC	4 cut(s)	217, 312, 1240, 2322
DdeI	CTNAG	9 cut(s)	291, 300, 389, 672, 1287, 1433, 1706, 1862, 1938
DraI	TTTAAA	1 cut(s)	154
DraIII	CACNNNGTG	1 cut(s)	1687
DrdI	GACNNNNNNGTC	1 cut(s)	1707
DriI	GACNNNNNGTC	1 cut(s)	1419
DseDI	GACNNNNNNGTC	1 cut(s)	1707
EaeI	YGGCCR	1 cut(s)	1643
EagI	CGGCCG	1 cut(s)	1643
Eam1104I	CTCTTC	4 cut(s)	39, 252, 1134, 1389
Eam1105I	GACNNNNNGTC	1 cut(s)	1419
EarI	CTCTTC	4 cut(s)	39, 252, 1134, 1389
Ecl136II	GAGCTC	1 cut(s)	1284
EclXI	CGGCCG	1 cut(s)	1643
Eco130I	CCWWGG	4 cut(s)	198, 252, 446, 2297
Eco147I	AGGCCT	1 cut(s)	373
Eco24I	GRGCYC	3 cut(s)	1205, 1286, 2337
Eco31I	GGTCTC	1 cut(s)	642
Eco47I	GGWCC	1 cut(s)	1421
Eco52I	CGGCCG	1 cut(s)	1643
Eco53kI	GAGCTC	1 cut(s)	1284
Eco57I	CTGAAG	6 cut(s)	63, 396, 734, 893, 1550, 1746
Eco72I	CACGTG	2 cut(s)	1010, 2272
Eco91I	GGTNACC	1 cut(s)	1982
EcoICRI	GAGCTC	1 cut(s)	1284
EcoO109I	RGGNCCY	2 cut(s)	517, 1202
EcoO65I	GGTNACC	1 cut(s)	1982
EcoRII	CCWGG	1 cut(s)	315
EcoT14I	CCWWGG	4 cut(s)	198, 252, 446, 2297
EcoT22I	ATGCAT	3 cut(s)	79, 282, 889
EcoT38I	GRGCYC	3 cut(s)	1205, 1286, 2337
ErhI	CCWWGG	4 cut(s)	198, 252, 446, 2297
FalI	AAGNNNNNCTT	2 cut(s)	324, 356
FauNDI	CATATG	3 cut(s)	1807, 2055, 2148
FbaI	TGATCA	3 cut(s)	51, 264, 1000
Fnu4HI	GCNGC	8 cut(s)	710, 978, 1014, 1269, 1482, 1505, 1731, 2161
FokI	GGATG	4 cut(s)	215, 1072, 1772, 2280
FriOI	GRGCYC	3 cut(s)	1205, 1286, 2337
Fsp4HI	GCNGC	8 cut(s)	710, 978, 1014, 1269, 1482, 1505, 1731, 2161
FspAI	RTGCGCAY	1 cut(s)	1443
FspBI	CTAG	5 cut(s)	38, 699, 864, 1490, 2306
FspI	TGCGCA	3 cut(s)	182, 497, 1443
GlaI	GCGC	5 cut(s)	182, 497, 1049, 1443, 1776
GluI	GCNGC	8 cut(s)	710, 978, 1014, 1269, 1482, 1505, 1731, 2161
GsaI	CCCAGC	1 cut(s)	2167
GsuI	CTGGAG	2 cut(s)	1527, 1628
HaeIII	GGCC	4 cut(s)	373, 518, 1203, 1645
HapII	CCGG	3 cut(s)	20, 1642, 1646
HgaI	GACGC	1 cut(s)	1710
HhaI	GCGC	5 cut(s)	183, 498, 1050, 1444, 1777
Hin1I	GRCGYC	1 cut(s)	1702
Hin6I	GCGC	5 cut(s)	181, 496, 1048, 1442, 1775
HinP1I	GCGC	5 cut(s)	181, 496, 1048, 1442, 1775
HincII	GTYRAC	4 cut(s)	175, 233, 288, 1181
HindII	GTYRAC	4 cut(s)	175, 233, 288, 1181
HindIII	AAGCTT	2 cut(s)	916, 1859
HinfI	GANTC	5 cut(s)	211, 610, 1397, 1472, 1610
HpaII	CCGG	3 cut(s)	20, 1642, 1646
HphI	GGTGA	3 cut(s)	274, 1337, 1619
Hpy166II	GTNNAC	6 cut(s)	175, 233, 288, 826, 1181, 1401
Hpy8I	GTNNAC	6 cut(s)	175, 233, 288, 826, 1181, 1401
Hpy99I	CGWCG	1 cut(s)	1704
HpyAV	CCTTC	7 cut(s)	582, 934, 1442, 1525, 1589, 1877, 1973
HpyCH4III	ACNGT	7 cut(s)	221, 481, 687, 738, 1143, 1660, 2095
HpyCH4IV	ACGT	3 cut(s)	310, 1009, 2271
HpyF10VI	GCNNNNNNNGC	8 cut(s)	277, 305, 524, 533, 542, 904, 1490, 1584
HpyF3I	CTNAG	9 cut(s)	291, 300, 389, 672, 1287, 1433, 1706, 1862, 1938
HpySE526I	ACGT	3 cut(s)	310, 1009, 2271
Hsp92I	GRCGYC	1 cut(s)	1702
HspAI	GCGC	5 cut(s)	181, 496, 1048, 1442, 1775
KpnI	GGTACC	1 cut(s)	1243
Ksp22I	TGATCA	3 cut(s)	51, 264, 1000
LguI	GCTCTTC	1 cut(s)	1134
LmnI	GCTCC	5 cut(s)	163, 1231, 1546, 1881, 2340
Lsp1109I	GCAGC	8 cut(s)	721, 964, 1000, 1280, 1468, 1516, 1717, 2172
LweI	GCATC	3 cut(s)	64, 289, 968
MaeI	CTAG	5 cut(s)	38, 699, 864, 1490, 2306
MaeII	ACGT	3 cut(s)	310, 1009, 2271
MaeIII	GTNAC	3 cut(s)	439, 1982, 2029
MbiI	CCGCTC	1 cut(s)	756
MflI	RGATCY	4 cut(s)	379, 489, 1121, 1253
MhlI	GDGCHC	3 cut(s)	1205, 1286, 2337
MlyI	GAGTC	3 cut(s)	1406, 1481, 1619
MmeI	TCCRAC	2 cut(s)	492, 1859
Mph1103I	ATGCAT	3 cut(s)	79, 282, 889
MroXI	GAANNNNTTC	1 cut(s)	768
MslI	CAYNNNNRTG	5 cut(s)	882, 1347, 2118, 2270, 2296
MspA1I	CMGCKG	2 cut(s)	712, 2163
MspCI	CTTAAG	1 cut(s)	931
MspI	CCGG	3 cut(s)	20, 1642, 1646
MspR9I	CCNGG	2 cut(s)	317, 1647
Mva1269I	GAATGC	1 cut(s)	1843
MvaI	CCWGG	1 cut(s)	317
MwoI	GCNNNNNNNGC	8 cut(s)	277, 305, 524, 533, 542, 904, 1490, 1584
NciI	CCSGG	1 cut(s)	1647
NcoI	CCATGG	1 cut(s)	2297
NdeI	CATATG	3 cut(s)	1807, 2055, 2148
NheI	GCTAGC	3 cut(s)	37, 863, 2305
NlaIV	GGNNCC	5 cut(s)	1203, 1241, 1293, 1422, 2336
NmeAIII	GCCGAG	1 cut(s)	1495
NsbI	TGCGCA	3 cut(s)	182, 497, 1443
NsiI	ATGCAT	3 cut(s)	79, 282, 889
NspI	RCATGY	2 cut(s)	1346, 1591
NspV	TTCGAA	1 cut(s)	586
OliI	CACNNNNGTG	1 cut(s)	2270
PagI	TCATGA	2 cut(s)	91, 2119
PceI	AGGCCT	1 cut(s)	373
PciI	ACATGT	1 cut(s)	1342
PciSI	GCTCTTC	1 cut(s)	1134
PctI	GAATGC	1 cut(s)	1843
PdmI	GAANNNNTTC	1 cut(s)	768
PfeI	GAWTC	2 cut(s)	211, 610
PflFI	GACNNNGTC	1 cut(s)	2095
PkrI	GCNGC	8 cut(s)	711, 979, 1015, 1270, 1483, 1506, 1732, 2162
PleI	GAGTC	3 cut(s)	1405, 1480, 1618
PmaCI	CACGTG	2 cut(s)	1010, 2272
PmlI	CACGTG	2 cut(s)	1010, 2272
PpsI	GAGTC	3 cut(s)	1405, 1480, 1618
Ppu21I	YACGTR	3 cut(s)	311, 1010, 2272
PscI	ACATGT	1 cut(s)	1342
PshBI	ATTAAT	1 cut(s)	1521
Psp124BI	GAGCTC	1 cut(s)	1286
Psp6I	CCWGG	1 cut(s)	315
PspCI	CACGTG	2 cut(s)	1010, 2272
PspEI	GGTNACC	1 cut(s)	1982
PspFI	CCCAGC	1 cut(s)	2163
PspGI	CCWGG	1 cut(s)	315
PspN4I	GGNNCC	5 cut(s)	1203, 1241, 1293, 1422, 2336
PspOMI	GGGCCC	1 cut(s)	1201
PspPI	GGNCC	4 cut(s)	517, 1201, 1202, 1421
PsuI	RGATCY	4 cut(s)	379, 489, 1121, 1253
PsyI	GACNNNGTC	1 cut(s)	2095
PvuII	CAGCTG	2 cut(s)	712, 2163
RsaI	GTAC	4 cut(s)	218, 313, 1241, 2323
RsaNI	GTAC	4 cut(s)	217, 312, 1240, 2322
RseI	CAYNNNNRTG	5 cut(s)	882, 1347, 2118, 2270, 2296
SacI	GAGCTC	1 cut(s)	1286
SapI	GCTCTTC	1 cut(s)	1134
SatI	GCNGC	8 cut(s)	710, 978, 1014, 1269, 1482, 1505, 1731, 2161
Sau96I	GGNCC	4 cut(s)	517, 1201, 1202, 1421
SchI	GAGTC	3 cut(s)	1406, 1481, 1619
ScrFI	CCNGG	2 cut(s)	317, 1647
SduI	GDGCHC	3 cut(s)	1205, 1286, 2337
SfaNI	GCATC	3 cut(s)	64, 289, 968
SfcI	CTRYAG	1 cut(s)	472
SfuI	TTCGAA	1 cut(s)	586
SinI	GGWCC	1 cut(s)	1421
SmiMI	CAYNNNNRTG	5 cut(s)	882, 1347, 2118, 2270, 2296
SmlI	CTYRAG	3 cut(s)	321, 485, 931
SmoI	CTYRAG	3 cut(s)	321, 485, 931
SseBI	AGGCCT	1 cut(s)	373
SsiI	CCGC	3 cut(s)	754, 1243, 1787
SspI	AATATT	1 cut(s)	1794
SspMI	CTAG	5 cut(s)	38, 699, 864, 1490, 2306
SstI	GAGCTC	1 cut(s)	1286
StuI	AGGCCT	1 cut(s)	373
StyD4I	CCNGG	2 cut(s)	315, 1645
StyI	CCWWGG	4 cut(s)	198, 252, 446, 2297
TaaI	ACNGT	7 cut(s)	221, 481, 687, 738, 1143, 1660, 2095
TaiI	ACGT	3 cut(s)	313, 1012, 2274
TaqI	TCGA	8 cut(s)	357, 541, 586, 1098, 1209, 1613, 1815, 2255
TaqII	GACCGA	1 cut(s)	666
TfiI	GAWTC	2 cut(s)	211, 610
TscAI	CASTG	2 cut(s)	406, 486
TseI	GCWGC	8 cut(s)	709, 977, 1013, 1268, 1481, 1504, 1730, 2160
TspDTI	ATGAA	9 cut(s)	80, 265, 761, 1200, 1362, 1461, 1776, 2010, 2156
TspGWI	ACGGA	2 cut(s)	593, 2094
TspRI	CASTG	2 cut(s)	406, 486
Tth111I	GACNNNGTC	1 cut(s)	2095
Vha464I	CTTAAG	1 cut(s)	931
VpaK11BI	GGWCC	1 cut(s)	1421
VspI	ATTAAT	1 cut(s)	1521
XapI	RAATTY	7 cut(s)	7, 846, 1428, 1928, 1943, 2084, 2235
XceI	RCATGY	2 cut(s)	1346, 1591
XmnI	GAANNNNTTC	1 cut(s)	768
XspI	CTAG	5 cut(s)	38, 699, 864, 1490, 2306
Zsp2I	ATGCAT	3 cut(s)	79, 282, 889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.