Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001063

Physical Location & Seq

Genomic Coordinates Reverse (-)

65860727 .. 65872121

Gene Structure 11395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG455500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGAGAAGAAGAAGAGTAGAGTACTGATAATCAGAGCAACAGGAAATCTGGGTCACCATTTAGCCAATGCCAGCCTCCATTTCTCTCACCCCACTTTCGCTCTCGTCCGACCCGACACCTTCTCCGACCCCCACAAGTCCCAAAACCTTCGAGCCCTCTCCAATGCCGGCGTCACACTCCTCCAAGGTTCGCTGGAAGATGAAGAGAACCTTGTTGGAGCAGTGAAGCAAGTTGATGTTGTGATTTGTGCTGTTCAGGTCAAACAGAGATTCATTCCATCAGAATTCGGGTTGGACCCAGATAAGACGCAAATTTCAGGGATGGACTACAACTTCTATTCAAACAAAGCCGAGATTAGGCGTCTTGTGGAAGCTCAAGGCATTCCCTACACTTTTATTTCCTGCAATTTCTATACGAGCTATTTGCTTCCTTCACTTGTGCAGCCGGGCCTCAAAGTGCCTCCAAGGGACAAAGTCACGATTTTCGGGGACGGAAATACTAAAGGCGTTTTTGTCAAGGAAATTGATGTAGCTGCCTTCACTATCAGGACATTGGACGATCCACGAACCTTGAACAAAATGACAGCACATCGAGCCTTTCAGTTCTGCAAGCAATACAAACGAACTACGGAGTTTCGAAGGTTATGTGAAATCATCAGGAATCATCTGGCTAATCTGAACAAGTATAGAGATCAAAGAGACCGACCTGACCTATCTGCACCTGAGAGCTTGCAACTGTATCTTGATACTAGATTTGAGCAGCTGAAGATAGCTACTGAACTTGAACTGTGGCAGGAAGCGTTCCGCTCTGTTGAAGATATTCATGGATTGATGTGCATGGTTAAGAAAACCCCTAAACCATCGTTGATGGTGGTTTACTATGCGAAGCTCACAGAAATTTTTTGGATTTCTGCTAGCCACCTTAATCATGCTTATGCATGGTTCAAGCTATTCTCGCTTCAGAAAAGCTTTAACAAAAACTTAAGTCAGAAGGATTTGCAGTTAATAGCATCATCTGTTGTCTTGGCTGCACTTTCAGTTCCCCCCTATGATCAGACACGTGCTGCCTCTCACTTGGAACTTGAAAATGAGAAAGAGCGCAATTTGAGGATGGCTAATCTAATTGGCTTTAATCTTGACCCCAAAATCGACAGAGGAGATGTGCTTTCAAGATCTGCTCTTCTATCAGAACTGGAATTAGTTGCCCCAAAGTTCCGCAATGAAAAGGCTTTGTTGGAAGATGAAGAAAAGGCTTTATTGGACGAGCTAGCCAAGGCAAATTTGGAAGAGGAAGAAAAGGAGGAAGAAAAGGCTTCTGGTACCAATTCAGTAGGAGACAAGAAACTCAACAAAAGAGAGGCTTCTTTCACAAATATAGACTATGAATGTGTATATTCAGACGACAGTGACTTTGATGAAGAATTTCTTAAAGATCTTGATTGCCCACCTATTGCTATCGTTTCATTTGTGTGTCCTAAGTTTTGTAGGGGAGGAAAATATATCTTATACTCTTTGGAATCTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001732 GO:0002181 GO:0002183 GO:0002188 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005852 GO:0005886 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0043614 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0071540 GO:0071541 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PCI

Protein Analysis

508

Amino Acids

57.88

Weight (kDa)

6.19

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NmrA	PF05368	4 - 86	6.6e-18	NmrA-like family
NAD_binding_10	PF13460	13 - 88	1.2e-06	NAD(P)H-binding
NmrA	PF05368	89 - 194	2.8e-21	NmrA-like family
eIF3a_PCI_TPR-like	PF22591	193 - 408	4.3e-62	eIF3a, PCI domain, TPR-like region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11420
fragaria_vesca	FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021 FvH4_6g07021
malus_domestica	MD04G1196800.v1.1 MD12G1209700.v1.1
prunus_persica	Prupe.6G317100_v2.0.a1 Prupe.6G317100_v2.0.a1
pyrus_communis	pycom04g17400 pycom12g19700
rosa_chinensis	RchiOBHm_Chr2g0109021 RchiOBHm_Chr3g0456551 RchiOBHm_Chr5g0047251 RchiOBHm_Chr6g0248701
rosa_laevigata	RLG00000025294 RLG00000028631
rosa_multiflora	Rmu_sc0000361.1_g000030 Rmu_sc0000670.1_g000004 Rmu_sc0000955.1_g000029 Rmu_sc0002045.1_g000025 Rmu_sc0002607.1_g000004 Rmu_sc0005473.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037410 Rroxscaffold_2G00104310 Rroxscaffold_3G00230480 Rroxscaffold_3G00256140 Rroxscaffold_6G00422630
rosa_rugosa	Rorug03G0013900 Rorug04G0204200
rosa_samantha	Rh1BG180500 Rh1DG210500 Rh2CG210900 Rh2DG107300 Rh2DG455500 Rh3AG074600 Rh3AG217800 Rh3BG076300 Rh3CG076000 Rh3DG078100 Rh4AG261300 Rh4BG267100 Rh4DG188600 Rh4DG191400 Rh4DG263400 Rh5BG322700 Rh5BG536200 Rh5BG542500 Rh5CG559400 Rh5CG565100 Rh5DG333700 Rh5DG412500 Rh6AG116300 Rh6BG110500 Rh6CG264500
rosa_wichuraiana	Rw3G006380 Rw5G047630 Rw6G003410 Rw6G025160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1319
AccB1I	GGYRCC	1 cut(s)	1319
AccBSI	CCGCTC	1 cut(s)	807
AciI	CCGC	2 cut(s)	805, 1216
AclWI	GGATC	1 cut(s)	554
AcsI	RAATTY	5 cut(s)	284, 312, 897, 1279, 1421
AcuI	CTGAAG	2 cut(s)	785, 944
AcvI	CACGTG	1 cut(s)	1061
AcyI	GRCGYC	2 cut(s)	171, 361
AfaI	GTAC	2 cut(s)	24, 1321
AfiI	CCNNNNNNNGG	1 cut(s)	357
AflII	CTTAAG	1 cut(s)	982
AflIII	ACRYGT	1 cut(s)	1058
AgsI	TTSAA	7 cut(s)	342, 574, 785, 815, 946, 1085, 1170
Alw26I	GTCTC	2 cut(s)	693, 1329
AlwI	GGATC	1 cut(s)	554
AoxI	GGCC	1 cut(s)	448
ApeKI	GCWGC	5 cut(s)	442, 533, 760, 1028, 1064
ApoI	RAATTY	5 cut(s)	284, 312, 897, 1279, 1421
ArsI	GACNNNNNNTTYG	2 cut(s)	1394, 1426
Asp700I	GAANNNNTTC	2 cut(s)	819, 1422
Asp718I	GGTACC	1 cut(s)	1319
AspLEI	GCGC	1 cut(s)	1101
AspS9I	GGNCC	2 cut(s)	295, 448
AsuC2I	CCSGG	1 cut(s)	447
AsuHPI	GGTGA	2 cut(s)	47, 80
AsuII	TTCGAA	1 cut(s)	637
AsuNHI	GCTAGC	2 cut(s)	914, 1267
AvaII	GGWCC	1 cut(s)	295
BanI	GGYRCC	1 cut(s)	1319
BanII	GRGCYC	1 cut(s)	157
BbrPI	CACGTG	1 cut(s)	1061
BbvI	GCAGC	5 cut(s)	454, 520, 772, 1015, 1051
BccI	CCATC	5 cut(s)	286, 316, 862, 868, 1105
BcgI	CGANNNNNNTGC	2 cut(s)	406, 440
BclI	TGATCA	1 cut(s)	1051
BcnI	CCSGG	1 cut(s)	447
BcoDI	GTCTC	2 cut(s)	693, 1329
BfaI	CTAG	3 cut(s)	750, 915, 1268
BfrI	CTTAAG	1 cut(s)	982
BglII	AGATCT	2 cut(s)	1172, 1432
BisI	GCNGC	5 cut(s)	443, 534, 761, 1029, 1065
BlsI	GCNGC	5 cut(s)	444, 535, 762, 1030, 1066
BmcAI	AGTACT	1 cut(s)	24
Bme1390I	CCNGG	1 cut(s)	447
Bme18I	GGWCC	1 cut(s)	295
BmgT120I	GGNCC	2 cut(s)	295, 448
BmiI	GGNNCC	2 cut(s)	297, 1321
BmrFI	CCNGG	1 cut(s)	447
BmsI	GCATC	1 cut(s)	1019
BmtI	GCTAGC	2 cut(s)	918, 1271
Bpu14I	TTCGAA	1 cut(s)	637
BpuEI	CTTGAG	1 cut(s)	360
BpuMI	CCSGG	1 cut(s)	447
BsaAI	YACGTR	1 cut(s)	1061
BsaHI	GRCGYC	2 cut(s)	171, 361
BsaI	GGTCTC	1 cut(s)	693
BsaJI	CCNNGG	3 cut(s)	184, 464, 1272
BsaXI	ACNNNNNCTCC	2 cut(s)	107, 137
Bsc4I	CCNNNNNNNGG	1 cut(s)	357
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	1 cut(s)	1197
Bse3DI	GCAATG	1 cut(s)	1225
BseDI	CCNNGG	3 cut(s)	184, 464, 1272
BseGI	GGATG	2 cut(s)	327, 1116
BseLI	CCNNNNNNNGG	1 cut(s)	357
BseMI	GCAATG	1 cut(s)	1225
BseMII	CTCAG	1 cut(s)	714
BseNI	ACTGG	1 cut(s)	1197
BseRI	GAGGAG	2 cut(s)	170, 1170
BseXI	GCAGC	5 cut(s)	454, 520, 772, 1015, 1051
BsgI	GTGCAG	3 cut(s)	461, 702, 1014
BshFI	GGCC	1 cut(s)	450
BshNI	GGYRCC	1 cut(s)	1319
BsiSI	CCGG	2 cut(s)	168, 446
BslFI	GGGAC	3 cut(s)	124, 482, 503
BslI	CCNNNNNNNGG	1 cut(s)	357
BsmAI	GTCTC	2 cut(s)	693, 1329
BsmFI	GGGAC	3 cut(s)	124, 482, 503
BsmI	GAATGC	1 cut(s)	381
BsnI	GGCC	1 cut(s)	450
Bso31I	GGTCTC	1 cut(s)	693
Bsp119I	TTCGAA	1 cut(s)	637
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp143I	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
BspACI	CCGC	2 cut(s)	805, 1216
BspANI	GGCC	1 cut(s)	450
BspCNI	CTCAG	1 cut(s)	715
BspLI	GGNNCC	2 cut(s)	297, 1321
BspOI	GCTAGC	2 cut(s)	918, 1271
BspPI	GGATC	1 cut(s)	554
BspQI	GCTCTTC	1 cut(s)	1185
BspT104I	TTCGAA	1 cut(s)	637
BspT107I	GGYRCC	1 cut(s)	1319
BspTI	CTTAAG	1 cut(s)	982
BspTNI	GGTCTC	1 cut(s)	693
BsrBI	CCGCTC	1 cut(s)	807
BsrDI	GCAATG	1 cut(s)	1225
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	1 cut(s)	1197
BssAI	RCCGGY	1 cut(s)	167
BssECI	CCNNGG	3 cut(s)	184, 464, 1272
BssMI	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
BssNI	GRCGYC	2 cut(s)	171, 361
BssT1I	CCWWGG	3 cut(s)	184, 464, 1272
Bst4CI	ACNGT	3 cut(s)	738, 789, 1406
Bst6I	CTCTTC	4 cut(s)	8, 198, 1185, 1281
BstACI	GRCGYC	2 cut(s)	171, 361
BstAFI	CTTAAG	1 cut(s)	982
BstBAI	YACGTR	1 cut(s)	1061
BstBI	TTCGAA	1 cut(s)	637
BstC8I	GCNNGC	6 cut(s)	73, 169, 611, 731, 916, 1269
BstDEI	CTNAG	2 cut(s)	723, 1476
BstEII	GGTNACC	1 cut(s)	53
BstF5I	GGATG	2 cut(s)	327, 1116
BstHHI	GCGC	1 cut(s)	1101
BstKTI	GATC	5 cut(s)	562, 694, 1054, 1175, 1435
BstMAI	GTCTC	2 cut(s)	693, 1329
BstMBI	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
BstMWI	GCNNNNNNNGC	2 cut(s)	593, 955
BstPI	GGTNACC	1 cut(s)	53
BstSCI	CCNGG	1 cut(s)	445
BstV1I	GCAGC	5 cut(s)	454, 520, 772, 1015, 1051
BstX2I	RGATCY	2 cut(s)	1172, 1432
BstYI	RGATCY	2 cut(s)	1172, 1432
BsuRI	GGCC	1 cut(s)	450
BtsCI	GGATG	2 cut(s)	327, 1116
BtsI	GCAGTG	1 cut(s)	228
BtsIMutI	CAGTG	2 cut(s)	228, 1411
Cac8I	GCNNGC	6 cut(s)	73, 169, 611, 731, 916, 1269
CfoI	GCGC	1 cut(s)	1101
Cfr10I	RCCGGY	1 cut(s)	167
Cfr13I	GGNCC	2 cut(s)	295, 448
CseI	GACGC	3 cut(s)	160, 316, 350
Csp6I	GTAC	2 cut(s)	23, 1320
CspCI	CAANNNNNGTGG	2 cut(s)	552, 587
CviAII	CATG	4 cut(s)	824, 838, 929, 939
CviQI	GTAC	2 cut(s)	23, 1320
DdeI	CTNAG	2 cut(s)	723, 1476
DpnI	GATC	5 cut(s)	561, 693, 1053, 1174, 1434
DpnII	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
Eam1104I	CTCTTC	4 cut(s)	8, 198, 1185, 1281
EarI	CTCTTC	4 cut(s)	8, 198, 1185, 1281
Eco130I	CCWWGG	3 cut(s)	184, 464, 1272
Eco24I	GRGCYC	1 cut(s)	157
Eco31I	GGTCTC	1 cut(s)	693
Eco47I	GGWCC	1 cut(s)	295
Eco57I	CTGAAG	2 cut(s)	785, 944
Eco72I	CACGTG	1 cut(s)	1061
Eco91I	GGTNACC	1 cut(s)	53
EcoO65I	GGTNACC	1 cut(s)	53
EcoRI	GAATTC	1 cut(s)	284
EcoT14I	CCWWGG	3 cut(s)	184, 464, 1272
EcoT22I	ATGCAT	1 cut(s)	940
EcoT38I	GRGCYC	1 cut(s)	157
ErhI	CCWWGG	3 cut(s)	184, 464, 1272
FaeI	CATG	4 cut(s)	827, 841, 932, 942
FalI	AAGNNNNNCTT	6 cut(s)	195, 227, 1345, 1377, 1410, 1442
FaqI	GGGAC	3 cut(s)	124, 482, 503
FatI	CATG	4 cut(s)	823, 837, 928, 938
FbaI	TGATCA	1 cut(s)	1051
Fnu4HI	GCNGC	5 cut(s)	443, 534, 761, 1029, 1065
FokI	GGATG	2 cut(s)	334, 1123
FriOI	GRGCYC	1 cut(s)	157
Fsp4HI	GCNGC	5 cut(s)	443, 534, 761, 1029, 1065
FspBI	CTAG	3 cut(s)	750, 915, 1268
GlaI	GCGC	1 cut(s)	1100
GluI	GCNGC	5 cut(s)	443, 534, 761, 1029, 1065
HaeIII	GGCC	1 cut(s)	450
HapII	CCGG	2 cut(s)	168, 446
HgaI	GACGC	3 cut(s)	160, 316, 350
HhaI	GCGC	1 cut(s)	1101
Hin1I	GRCGYC	2 cut(s)	171, 361
Hin1II	CATG	4 cut(s)	827, 841, 932, 942
Hin6I	GCGC	1 cut(s)	1099
HinP1I	GCGC	1 cut(s)	1099
HindIII	AAGCTT	1 cut(s)	967
HinfI	GANTC	3 cut(s)	270, 661, 1517
HpaII	CCGG	2 cut(s)	168, 446
HphI	GGTGA	2 cut(s)	47, 80
Hpy166II	GTNNAC	1 cut(s)	877
Hpy188III	TCNNGA	7 cut(s)	478, 547, 658, 743, 1136, 1170, 1436
Hpy8I	GTNNAC	1 cut(s)	877
HpyAV	CCTTC	6 cut(s)	130, 158, 441, 547, 633, 985
HpyCH4III	ACNGT	3 cut(s)	738, 789, 1406
HpyCH4IV	ACGT	1 cut(s)	1060
HpyCH4V	TGCA	9 cut(s)	405, 442, 609, 719, 733, 837, 938, 1000, 1031
HpyF10VI	GCNNNNNNNGC	2 cut(s)	593, 955
HpyF3I	CTNAG	2 cut(s)	723, 1476
HpySE526I	ACGT	1 cut(s)	1060
Hsp92I	GRCGYC	2 cut(s)	171, 361
Hsp92II	CATG	4 cut(s)	827, 841, 932, 942
HspAI	GCGC	1 cut(s)	1099
KpnI	GGTACC	1 cut(s)	1323
KroI	GCCGGC	1 cut(s)	167
KroNI	GCCGGC	1 cut(s)	169
Ksp22I	TGATCA	1 cut(s)	1051
Kzo9I	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
LguI	GCTCTTC	1 cut(s)	1185
LmnI	GCTCC	1 cut(s)	218
Lsp1109I	GCAGC	5 cut(s)	454, 520, 772, 1015, 1051
LweI	GCATC	1 cut(s)	1019
MaeI	CTAG	3 cut(s)	750, 915, 1268
MaeII	ACGT	1 cut(s)	1060
MaeIII	GTNAC	4 cut(s)	53, 172, 475, 1406
MalI	GATC	5 cut(s)	561, 693, 1053, 1174, 1434
MbiI	CCGCTC	1 cut(s)	807
MboI	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
MflI	RGATCY	2 cut(s)	1172, 1432
MhlI	GDGCHC	1 cut(s)	157
MmeI	TCCRAC	5 cut(s)	133, 150, 196, 273, 1215
Mph1103I	ATGCAT	1 cut(s)	940
MroNI	GCCGGC	1 cut(s)	167
MroXI	GAANNNNTTC	2 cut(s)	819, 1422
MseI	TTAA	8 cut(s)	843, 924, 972, 983, 1004, 1131, 1428, 1525
MslI	CAYNNNNRTG	2 cut(s)	933, 1468
MspA1I	CMGCKG	1 cut(s)	763
MspCI	CTTAAG	1 cut(s)	982
MspI	CCGG	2 cut(s)	168, 446
MspR9I	CCNGG	1 cut(s)	447
Mva1269I	GAATGC	1 cut(s)	381
MwoI	GCNNNNNNNGC	2 cut(s)	593, 955
NaeI	GCCGGC	1 cut(s)	169
NciI	CCSGG	1 cut(s)	447
NdeII	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
NgoMIV	GCCGGC	1 cut(s)	167
NheI	GCTAGC	2 cut(s)	914, 1267
NlaIII	CATG	4 cut(s)	827, 841, 932, 942
NlaIV	GGNNCC	2 cut(s)	297, 1321
NmeAIII	GCCGAG	1 cut(s)	376
NmuCI	GTSAC	4 cut(s)	53, 172, 475, 1406
NsiI	ATGCAT	1 cut(s)	940
NspV	TTCGAA	1 cut(s)	637
PciSI	GCTCTTC	1 cut(s)	1185
PcsI	WCGNNNNNNNCGW	1 cut(s)	111
PctI	GAATGC	1 cut(s)	381
PdiI	GCCGGC	1 cut(s)	169
PdmI	GAANNNNTTC	2 cut(s)	819, 1422
PfeI	GAWTC	3 cut(s)	270, 661, 1517
PflFI	GACNNNGTC	1 cut(s)	473
PkrI	GCNGC	5 cut(s)	444, 535, 762, 1030, 1066
PmaCI	CACGTG	1 cut(s)	1061
PmlI	CACGTG	1 cut(s)	1061
Ppu21I	YACGTR	1 cut(s)	1061
PspCI	CACGTG	1 cut(s)	1061
PspEI	GGTNACC	1 cut(s)	53
PspN4I	GGNNCC	2 cut(s)	297, 1321
PspPI	GGNCC	2 cut(s)	295, 448
PsuI	RGATCY	2 cut(s)	1172, 1432
PsyI	GACNNNGTC	1 cut(s)	473
PvuII	CAGCTG	1 cut(s)	763
RsaI	GTAC	2 cut(s)	24, 1321
RsaNI	GTAC	2 cut(s)	23, 1320
RseI	CAYNNNNRTG	2 cut(s)	933, 1468
SapI	GCTCTTC	1 cut(s)	1185
SaqAI	TTAA	8 cut(s)	843, 924, 972, 983, 1004, 1131, 1428, 1525
SatI	GCNGC	5 cut(s)	443, 534, 761, 1029, 1065
Sau3AI	GATC	5 cut(s)	559, 691, 1051, 1172, 1432
Sau96I	GGNCC	2 cut(s)	295, 448
ScaI	AGTACT	1 cut(s)	24
ScrFI	CCNGG	1 cut(s)	447
SduI	GDGCHC	1 cut(s)	157
SfaNI	GCATC	1 cut(s)	1019
SfuI	TTCGAA	1 cut(s)	637
SinI	GGWCC	1 cut(s)	295
SmiMI	CAYNNNNRTG	2 cut(s)	933, 1468
SmlI	CTYRAG	2 cut(s)	375, 982
SmoI	CTYRAG	2 cut(s)	375, 982
SsiI	CCGC	2 cut(s)	805, 1216
SspMI	CTAG	3 cut(s)	750, 915, 1268
StyD4I	CCNGG	1 cut(s)	445
StyI	CCWWGG	3 cut(s)	184, 464, 1272
TaaI	ACNGT	3 cut(s)	738, 789, 1406
TaiI	ACGT	1 cut(s)	1063
TaqI	TCGA	4 cut(s)	151, 592, 637, 1149
TaqII	GACCGA	1 cut(s)	717
TatI	WGTACW	1 cut(s)	22
TfiI	GAWTC	3 cut(s)	270, 661, 1517
Tru1I	TTAA	8 cut(s)	843, 924, 972, 983, 1004, 1131, 1428, 1525
Tru9I	TTAA	8 cut(s)	843, 924, 972, 983, 1004, 1131, 1428, 1525
TscAI	CASTG	2 cut(s)	228, 1411
TseFI	GTSAC	4 cut(s)	53, 172, 475, 1406
TseI	GCWGC	5 cut(s)	442, 533, 760, 1028, 1064
Tsp45I	GTSAC	4 cut(s)	53, 172, 475, 1406
TspDTI	ATGAA	8 cut(s)	216, 262, 812, 1236, 1257, 1398, 1431, 1452
TspGWI	ACGGA	2 cut(s)	507, 644
TspRI	CASTG	2 cut(s)	228, 1411
Tth111I	GACNNNGTC	1 cut(s)	473
Vha464I	CTTAAG	1 cut(s)	982
VpaK11BI	GGWCC	1 cut(s)	295
XapI	RAATTY	5 cut(s)	284, 312, 897, 1279, 1421
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1279
XmnI	GAANNNNTTC	2 cut(s)	819, 1422
XspI	CTAG	3 cut(s)	750, 915, 1268
ZrmI	AGTACT	1 cut(s)	24
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.