Rh2CG210900

HAUS augmin-like complex subunit 6 N-terminus

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
20674926 .. 20678283
3358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG210900.1

Sequence Viewer

Length: 1302 bp
ATGGCTAATCTAATTGGCTTTAATCTTGACCCCAAAATCGACAGAGGAGATGTGCTTTCAAGATTTGCTCTTCTATCAGAACTGGTCTCCAAAGGTGTCTTGAGCTGTGCAACCCAGGAAGTAAAGGATCTCTTCCATCTCCTGGAGCATGAATTTCTACCTCTCGACCTTGCTGTAAAGATACAACCACTGTTGACTAAAATCTCAAAATTTGGGGGTAAGCTGGCTTCAGCTTCTTCTGTTCCTGAAGTGCAACTGTCTCAATATGTTCCTGCACTTGAAAAGCTTGGTACTTTGAGGTTGCTCCAGCAGGTGTCTCGGGTGTATCAGTCGATGAAGATTGAACATTTATCTCGGATGATCCCATTTTATGACTTTTCTGTTGTAGAGAAGATATATGTGGATGCTGTTAAACATAACTTCATAGCTATGAAAGTCGACCATATGAAGGGTGTTATGATGTTTGGTAACTTGGCTTATTTGCAGCAAGAGCTGGAAAAATTACATGATCTTAGGAACAAAGTCAAGTTGGAAGGGGAACATTGGGATGACCTTGTATCTAGTTCGAGTCAGAATTCTCATTTAGTATCCAAGGCTACTCGTTTGTGGGAGTCGATATTAGCCAGTAAAAGTCAACATGAAGTTCTTGCTTCGGGCCCTATCGAGGATTTAATCGCTCATCGGGAGCATAGGTACCGCATTTCTGGATCTTCTTTGCTTGCAGCTATGGATCAGAGCTCTCAGGTTCCTTATGCAGATGTCTTATCTGTCCAGTCTGGTGATTTTACTCCTACACATGTTGATGATAAAGAGCAGAGTGATGGTTCATATGTCAATATTAACAGAGAAAAGATGAAGAATAATTTAGATTCATCCCATTCACAAGTAAATGATGAAACTCTTCATCGAGCAGATGAGAGAAGTGGAAGAGTCCACCCAACTGTTGACGTGGCAGAAATTATCAGGCGTTGGACACATACTTTACAGCGTATTCATAAACAGTCACTTCATATGGCAAAAGCTAATGAGGGAGAGGGTCCAGAAATTCTAAGAAGTGCGCATGAAGGCAGTTCAAGTGGTCATGCCGAGTCATTAGCTGCAACACTAGCTGAACATCAGCAGCACTTGGTTAGCTTTCAGGTTCTCATTAATCAACTAAAGGAAGTTGCTCCAGCAATACAAAAGTCAATATCAGAATGGACAGATAAAGTAGATAGCATTTCCTCTAATCTGCCTCCAATGATTAAGCATCCTGGCCAGATGGAGAAGGGACTTGCCTCACTACTGAGGAGTGCCTGCTAG

Protein Analysis

433

Amino Acids

48.43

Weight (kDa)

6.36

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PCI PF01399 85 - 155 1.2e-06 PCI domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 301
Acc16I TGCGCA 1 cut(s) 1059
Acc36I ACCTGC 1 cut(s) 301
Acc65I GGTACC 1 cut(s) 693
AccB1I GGYRCC 1 cut(s) 693
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 1 cut(s) 438
AciI CCGC 1 cut(s) 697
AclWI GGATC 4 cut(s) 135, 355, 715, 738
AcoI YGGCCR 1 cut(s) 1255
AcsI RAATTY 4 cut(s) 152, 209, 574, 1044
AcuI CTGAAG 2 cut(s) 213, 267
AfaI GTAC 2 cut(s) 292, 695
AfiI CCNNNNNNNGG 3 cut(s) 142, 448, 664
AflIII ACRYGT 1 cut(s) 796
AgsI TTSAA 4 cut(s) 60, 281, 344, 1074
AjiI CACGTC 1 cut(s) 949
AjnI CCWGG 3 cut(s) 114, 141, 1252
Alw21I GWGCWC 1 cut(s) 740
Alw26I GTCTC 3 cut(s) 91, 264, 321
AlwI GGATC 4 cut(s) 135, 355, 715, 738
Ama87I CYCGRG 1 cut(s) 318
AoxI GGCC 2 cut(s) 655, 1255
ApaI GGGCCC 1 cut(s) 659
ApeKI GCWGC 4 cut(s) 484, 722, 1097, 1120
ApoI RAATTY 4 cut(s) 152, 209, 574, 1044
AseI ATTAAT 1 cut(s) 1149
Asp700I GAANNNNTTC 1 cut(s) 900
Asp718I GGTACC 1 cut(s) 693
AspLEI GCGC 1 cut(s) 1060
AspS9I GGNCC 3 cut(s) 655, 656, 1037
AsuHPI GGTGA 1 cut(s) 791
AvaI CYCGRG 1 cut(s) 318
AvaII GGWCC 1 cut(s) 1037
BaeGI GKGCMC 1 cut(s) 659
BalI TGGCCA 1 cut(s) 1257
BanI GGYRCC 1 cut(s) 693
BanII GRGCYC 2 cut(s) 659, 740
BarI GAAGNNNNNNTAC 2 cut(s) 211, 243
Bbv12I GWGCWC 1 cut(s) 740
BbvI GCAGC 4 cut(s) 496, 734, 1084, 1132
BccI CCATC 3 cut(s) 144, 815, 1255
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 3 cut(s) 116, 143, 1254
BciVI GTATCC 1 cut(s) 598
BcoDI GTCTC 3 cut(s) 91, 264, 321
BfaI CTAG 3 cut(s) 561, 1106, 1300
BfuAI ACCTGC 1 cut(s) 301
BfuI GTATCC 1 cut(s) 598
BisI GCNGC 4 cut(s) 485, 723, 1098, 1121
BlsI GCNGC 4 cut(s) 486, 724, 1099, 1122
Bme1390I CCNGG 3 cut(s) 116, 143, 1254
Bme18I GGWCC 1 cut(s) 1037
BmeT110I CYCGRG 1 cut(s) 318
BmgBI CACGTC 1 cut(s) 949
BmgT120I GGNCC 3 cut(s) 655, 656, 1037
BmiI GGNNCC 4 cut(s) 657, 695, 747, 1038
BmrFI CCNGG 3 cut(s) 116, 143, 1254
BmsI GCATC 2 cut(s) 394, 1258
BpmI CTGGAG 3 cut(s) 164, 290, 1155
BpuEI CTTGAG 1 cut(s) 121
BsaI GGTCTC 1 cut(s) 91
BsaJI CCNNGG 2 cut(s) 114, 591
BsaXI ACNNNNNCTCC 2 cut(s) 677, 707
Bsc4I CCNNNNNNNGG 3 cut(s) 142, 448, 664
Bse1I ACTGG 3 cut(s) 87, 624, 772
BseBI CCWGG 3 cut(s) 116, 143, 1254
BseDI CCNNGG 2 cut(s) 114, 591
BseGI GGATG 5 cut(s) 363, 409, 553, 872, 1249
BseLI CCNNNNNNNGG 3 cut(s) 142, 448, 664
BseMII CTCAG 2 cut(s) 755, 1277
BseNI ACTGG 3 cut(s) 87, 624, 772
BseRI GAGGAG 1 cut(s) 60
BseSI GKGCMC 1 cut(s) 659
BseXI GCAGC 4 cut(s) 496, 734, 1084, 1132
BsgI GTGCAG 1 cut(s) 258
BshFI GGCC 2 cut(s) 657, 1257
BshNI GGYRCC 1 cut(s) 693
BsiHKAI GWGCWC 1 cut(s) 740
BsiHKCI CYCGRG 1 cut(s) 318
BslFI GGGAC 1 cut(s) 1284
BslI CCNNNNNNNGG 3 cut(s) 142, 448, 664
BsmAI GTCTC 3 cut(s) 91, 264, 321
BsmFI GGGAC 1 cut(s) 1284
BsnI GGCC 2 cut(s) 657, 1257
Bso31I GGTCTC 1 cut(s) 91
BsoBI CYCGRG 1 cut(s) 318
Bsp120I GGGCCC 1 cut(s) 655
Bsp1286I GDGCHC 2 cut(s) 659, 740
Bsp143I GATC 5 cut(s) 127, 360, 508, 707, 730
BspACI CCGC 1 cut(s) 697
BspANI GGCC 2 cut(s) 657, 1257
BspCNI CTCAG 2 cut(s) 754, 1278
BspLI GGNNCC 4 cut(s) 657, 695, 747, 1038
BspMI ACCTGC 1 cut(s) 301
BspPI GGATC 4 cut(s) 135, 355, 715, 738
BspQI GCTCTTC 1 cut(s) 75
BspT107I GGYRCC 1 cut(s) 693
BspTNI GGTCTC 1 cut(s) 91
BsrI ACTGG 3 cut(s) 87, 624, 772
BssECI CCNNGG 2 cut(s) 114, 591
BssMI GATC 5 cut(s) 127, 360, 508, 707, 730
BssT1I CCWWGG 1 cut(s) 591
Bst2UI CCWGG 3 cut(s) 116, 143, 1254
Bst4CI ACNGT 4 cut(s) 192, 258, 943, 1002
Bst6I CTCTTC 4 cut(s) 75, 137, 906, 922
BstC8I GCNNGC 3 cut(s) 225, 720, 1297
BstDEI CTNAG 4 cut(s) 512, 741, 1049, 1286
BstF5I GGATG 5 cut(s) 363, 409, 553, 872, 1249
BstHHI GCGC 1 cut(s) 1060
BstKTI GATC 5 cut(s) 130, 363, 511, 710, 733
BstMAI GTCTC 3 cut(s) 91, 264, 321
BstMBI GATC 5 cut(s) 127, 360, 508, 707, 730
BstMWI GCNNNNNNNGC 2 cut(s) 490, 1106
BstNI CCWGG 3 cut(s) 116, 143, 1254
BstNSI RCATGY 1 cut(s) 800
BstSCI CCNGG 3 cut(s) 114, 141, 1252
BstSLI GKGCMC 1 cut(s) 659
BstV1I GCAGC 4 cut(s) 496, 734, 1084, 1132
BstX2I RGATCY 2 cut(s) 127, 707
BstYI RGATCY 2 cut(s) 127, 707
BsuI GTATCC 1 cut(s) 598
BsuRI GGCC 2 cut(s) 657, 1257
BtrI CACGTC 1 cut(s) 949
BtsCI GGATG 5 cut(s) 363, 409, 553, 872, 1249
BtsIMutI CAGTG 1 cut(s) 188
BveI ACCTGC 1 cut(s) 301
Cac8I GCNNGC 3 cut(s) 225, 720, 1297
CfoI GCGC 1 cut(s) 1060
Cfr13I GGNCC 3 cut(s) 655, 656, 1037
Csp6I GTAC 2 cut(s) 291, 694
CviAII CATG 6 cut(s) 149, 506, 638, 797, 1061, 1082
CviQI GTAC 2 cut(s) 291, 694
DdeI CTNAG 4 cut(s) 512, 741, 1049, 1286
DpnI GATC 5 cut(s) 129, 362, 510, 709, 732
DpnII GATC 5 cut(s) 127, 360, 508, 707, 730
EaeI YGGCCR 1 cut(s) 1255
Eam1104I CTCTTC 4 cut(s) 75, 137, 906, 922
EarI CTCTTC 4 cut(s) 75, 137, 906, 922
Ecl136II GAGCTC 1 cut(s) 738
Eco130I CCWWGG 1 cut(s) 591
Eco24I GRGCYC 2 cut(s) 659, 740
Eco31I GGTCTC 1 cut(s) 91
Eco47I GGWCC 1 cut(s) 1037
Eco53kI GAGCTC 1 cut(s) 738
Eco57I CTGAAG 2 cut(s) 213, 267
Eco88I CYCGRG 1 cut(s) 318
EcoICRI GAGCTC 1 cut(s) 738
EcoO109I RGGNCCY 1 cut(s) 656
EcoRI GAATTC 1 cut(s) 574
EcoRII CCWGG 3 cut(s) 114, 141, 1252
EcoT14I CCWWGG 1 cut(s) 591
EcoT38I GRGCYC 2 cut(s) 659, 740
ErhI CCWWGG 1 cut(s) 591
FaeI CATG 6 cut(s) 152, 509, 641, 800, 1064, 1085
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FaqI GGGAC 1 cut(s) 1284
FatI CATG 6 cut(s) 148, 505, 637, 796, 1060, 1081
FauNDI CATATG 3 cut(s) 444, 829, 1011
FblI GTMKAC 1 cut(s) 438
Fnu4HI GCNGC 4 cut(s) 485, 723, 1098, 1121
FokI GGATG 5 cut(s) 370, 416, 560, 859, 1236
FriOI GRGCYC 2 cut(s) 659, 740
Fsp4HI GCNGC 4 cut(s) 485, 723, 1098, 1121
FspAI RTGCGCAY 1 cut(s) 1059
FspBI CTAG 3 cut(s) 561, 1106, 1300
FspI TGCGCA 1 cut(s) 1059
GlaI GCGC 1 cut(s) 1059
GluI GCNGC 4 cut(s) 485, 723, 1098, 1121
GsuI CTGGAG 3 cut(s) 164, 290, 1155
HaeIII GGCC 2 cut(s) 657, 1257
HhaI GCGC 1 cut(s) 1060
Hin1II CATG 6 cut(s) 152, 509, 641, 800, 1064, 1085
Hin6I GCGC 1 cut(s) 1058
HinP1I GCGC 1 cut(s) 1058
HincII GTYRAC 4 cut(s) 195, 439, 635, 946
HindII GTYRAC 4 cut(s) 195, 439, 635, 946
HindIII AAGCTT 1 cut(s) 284
HinfI GANTC 5 cut(s) 568, 611, 869, 930, 1088
HphI GGTGA 1 cut(s) 791
Hpy166II GTNNAC 5 cut(s) 195, 439, 635, 934, 946
Hpy188I TCNGA 5 cut(s) 79, 357, 573, 735, 1195
Hpy188III TCNNGA 8 cut(s) 26, 60, 100, 164, 245, 683, 705, 1040
Hpy8I GTNNAC 5 cut(s) 195, 439, 635, 934, 946
HpyAV CCTTC 4 cut(s) 442, 527, 1058, 1261
HpyCH4III ACNGT 4 cut(s) 192, 258, 943, 1002
HpyCH4IV ACGT 1 cut(s) 948
HpyCH4V TGCA 7 cut(s) 110, 253, 275, 484, 722, 755, 1100
HpyF10VI GCNNNNNNNGC 2 cut(s) 490, 1106
HpyF3I CTNAG 4 cut(s) 512, 741, 1049, 1286
HpySE526I ACGT 1 cut(s) 948
Hsp92II CATG 6 cut(s) 152, 509, 641, 800, 1064, 1085
HspAI GCGC 1 cut(s) 1058
KpnI GGTACC 1 cut(s) 697
Kzo9I GATC 5 cut(s) 127, 360, 508, 707, 730
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 4 cut(s) 145, 309, 685, 1174
Lsp1109I GCAGC 4 cut(s) 496, 734, 1084, 1132
LweI GCATC 2 cut(s) 394, 1258
MaeI CTAG 3 cut(s) 561, 1106, 1300
MaeII ACGT 1 cut(s) 948
MaeIII GTNAC 2 cut(s) 467, 1002
MalI GATC 5 cut(s) 129, 362, 510, 709, 732
MboI GATC 5 cut(s) 127, 360, 508, 707, 730
MboII GAAGA 9 cut(s) 62, 124, 228, 349, 403, 702, 868, 893, 939
MflI RGATCY 2 cut(s) 127, 707
MhlI GDGCHC 2 cut(s) 659, 740
MlsI TGGCCA 1 cut(s) 1257
MluCI AATT 8 cut(s) 12, 152, 209, 500, 574, 862, 957, 1044
MluNI TGGCCA 1 cut(s) 1257
MlyI GAGTC 4 cut(s) 577, 620, 939, 1097
MmeI TCCRAC 2 cut(s) 510, 950
Mox20I TGGCCA 1 cut(s) 1257
MroXI GAANNNNTTC 1 cut(s) 900
MscI TGGCCA 1 cut(s) 1257
MseI TTAA 6 cut(s) 21, 411, 671, 840, 1149, 1245
MslI CAYNNNNRTG 3 cut(s) 428, 546, 801
Msp20I TGGCCA 1 cut(s) 1257
MspR9I CCNGG 3 cut(s) 116, 143, 1254
MvaI CCWGG 3 cut(s) 116, 143, 1254
MwoI GCNNNNNNNGC 2 cut(s) 490, 1106
NdeI CATATG 3 cut(s) 444, 829, 1011
NdeII GATC 5 cut(s) 127, 360, 508, 707, 730
NlaIII CATG 6 cut(s) 152, 509, 641, 800, 1064, 1085
NlaIV GGNNCC 4 cut(s) 657, 695, 747, 1038
NmeAIII GCCGAG 1 cut(s) 1111
NmuCI GTSAC 1 cut(s) 1002
NsbI TGCGCA 1 cut(s) 1059
NspI RCATGY 1 cut(s) 800
PaqCI CACCTGC 1 cut(s) 301
PciI ACATGT 1 cut(s) 796
PciSI GCTCTTC 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 1 cut(s) 869
PflMI CCANNNNNTGG 1 cut(s) 142
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 4 cut(s) 486, 724, 1099, 1122
PleI GAGTC 4 cut(s) 576, 619, 938, 1096
PpsI GAGTC 4 cut(s) 576, 619, 938, 1096
PscI ACATGT 1 cut(s) 796
PshBI ATTAAT 1 cut(s) 1149
Psp124BI GAGCTC 1 cut(s) 740
Psp6I CCWGG 3 cut(s) 114, 141, 1252
PspGI CCWGG 3 cut(s) 114, 141, 1252
PspN4I GGNNCC 4 cut(s) 657, 695, 747, 1038
PspOMI GGGCCC 1 cut(s) 655
PspPI GGNCC 3 cut(s) 655, 656, 1037
PsuI RGATCY 2 cut(s) 127, 707
RsaI GTAC 2 cut(s) 292, 695
RsaNI GTAC 2 cut(s) 291, 694
RseI CAYNNNNRTG 3 cut(s) 428, 546, 801
SacI GAGCTC 1 cut(s) 740
SalI GTCGAC 1 cut(s) 437
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 6 cut(s) 21, 411, 671, 840, 1149, 1245
SatI GCNGC 4 cut(s) 485, 723, 1098, 1121
Sau3AI GATC 5 cut(s) 127, 360, 508, 707, 730
Sau96I GGNCC 3 cut(s) 655, 656, 1037
SchI GAGTC 4 cut(s) 577, 620, 939, 1097
ScrFI CCNGG 3 cut(s) 116, 143, 1254
SduI GDGCHC 2 cut(s) 659, 740
SfaNI GCATC 2 cut(s) 394, 1258
SinI GGWCC 1 cut(s) 1037
SmiMI CAYNNNNRTG 3 cut(s) 428, 546, 801
SmlI CTYRAG 1 cut(s) 100
SmoI CTYRAG 1 cut(s) 100
Sse9I AATT 8 cut(s) 12, 152, 209, 500, 574, 862, 957, 1044
SsiI CCGC 1 cut(s) 697
SspI AATATT 1 cut(s) 838
SspMI CTAG 3 cut(s) 561, 1106, 1300
SstI GAGCTC 1 cut(s) 740
StyD4I CCNGG 3 cut(s) 114, 141, 1252
StyI CCWWGG 1 cut(s) 591
TaaI ACNGT 4 cut(s) 192, 258, 943, 1002
TaiI ACGT 1 cut(s) 951
TaqI TCGA 8 cut(s) 39, 165, 332, 438, 566, 614, 663, 907
TasI AATT 8 cut(s) 12, 152, 209, 500, 574, 862, 957, 1044
TfiI GAWTC 1 cut(s) 869
Tru1I TTAA 6 cut(s) 21, 411, 671, 840, 1149, 1245
Tru9I TTAA 6 cut(s) 21, 411, 671, 840, 1149, 1245
TscAI CASTG 1 cut(s) 195
TseFI GTSAC 1 cut(s) 1002
TseI GCWGC 4 cut(s) 484, 722, 1097, 1120
Tsp45I GTSAC 1 cut(s) 1002
TspRI CASTG 1 cut(s) 195
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 1 cut(s) 1037
VspI ATTAAT 1 cut(s) 1149
XapI RAATTY 4 cut(s) 152, 209, 574, 1044
XceI RCATGY 1 cut(s) 800
XmiI GTMKAC 1 cut(s) 438
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 3 cut(s) 561, 1106, 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.