MD15G1391100.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
48558865 .. 48560553
1689 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1391100.v1.1.491

Sequence Viewer

Length: 1155 bp
ATGCCTTTTATGGTTTGCTTTGTTCTTGCCATGGCATTTGTTGTTGCTCAAGCACAACAAATGCAGTCAAATATCAGCCACGGATCTTCCTTAACGCCGACTACCAACTCCTCGTGGTTGTCACGTTCTGGTGTATACGCCTTTGGATTTTACAAGCAAGGAAATGGCTATGCTGTGGGGATATTTCTTGCTGGAATCCCCCAAACAACTATAGTGTGGACTGCAAACCGAGACGACCCTCCGCTCTCCAGCAATGTTACTTTGGACTTCACAAGTGATGGGTTTTCCTTGACATCAACACCAGGCCAAAAAGTTGGTAGAGGCGCGTCGGGAACAGTTTATAAAGGAGTGATCTTGGCCAGCCAAAAGCGAGTTGCTGTCAAACGACTAGAGAAAGTTGCTGCTGAAGGCGAAAAAGAATTTCAGACTGAACTAAAAGTCATTGGGAAAACCCATCACAAGAATTTAGTCCGTCTGCTTGGATACTGTCTTGATGGACCAAAAAGGCTTTTGGTATACGAGTACATGAGCAATGGCTCACTTGCAGATATACTCTTCACGCCTGATGGGAAGCCGTCTTGGGAAGAAAGAATGAGAATAGCTTGCAACATAGCGCGAGGATTTCTTTACCTCCATGAAGAGTGTGATACGCAGATTATTCATTGTGACATAAAGCCCCAAAACATTTTGATGGATGAGTACATGTGCCCGAAAATAGCCGACTTTGGATTGGCAAAGCTGCTTAAGGCAGACCAAACTAGAACCACAACTGGATTCAGAGGAACCAGGGGATATGTTGCACCAGAGTGGCATAGGAAAATGCCAATAACAGTTAAAGCTGATGTTTACAGCTTCGGAGTTGTGTTGTTGGAGATCATATGTTGTCGAAGGAATGTGGATTGGAGTCTTCCCGACGAGGAGGCTATTTTGGATGAATTAGCCTACCATTGTTTCGAGACGGGTGAGCTTGGAAAACTAGTGGGTGAAGAAGAGGTAAACACAAGGCAATTTGAAAGGATGATTAAAGTTGGACTTTGGTGCATCCAGGATGAACCGTCGTTGCGTCCTTCTATGAAGAAGGTTTTACTCATGCTTGAAGGAACTGTAGACATCCCAATCCCTCCCAATCCTATTTCTTTTCTCAGCACCATCTAA

Protein Analysis

385

Amino Acids

42.87

Weight (kDa)

6.67

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 102 - 362 2.6e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 103 - 362 7.9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 342
AccBSI CCGCTC 1 cut(s) 244
AccI GTMKAC 3 cut(s) 135, 516, 1107
AccII CGCG 2 cut(s) 326, 616
AciI CCGC 1 cut(s) 242
AclWI GGATC 1 cut(s) 91
AcoI YGGCCR 1 cut(s) 357
AcsI RAATTY 2 cut(s) 419, 463
AcuI CTGAAG 1 cut(s) 426
AfaI GTAC 2 cut(s) 524, 701
AflII CTTAAG 1 cut(s) 743
AflIII ACRYGT 1 cut(s) 702
AgsI TTSAA 2 cut(s) 1013, 1097
AhlI ACTAGT 1 cut(s) 976
AjnI CCWGG 3 cut(s) 301, 785, 1044
AleI CACNNNNGTG 1 cut(s) 805
AluBI AGCT 5 cut(s) 602, 739, 839, 852, 967
AluI AGCT 5 cut(s) 602, 739, 839, 852, 967
Alw26I GTCTC 2 cut(s) 225, 950
AlwI GGATC 1 cut(s) 91
AoxI GGCC 2 cut(s) 304, 357
ApeKI GCWGC 2 cut(s) 401, 739
ApoI RAATTY 2 cut(s) 419, 463
AspLEI GCGC 2 cut(s) 326, 616
AspS9I GGNCC 1 cut(s) 497
AsuHPI GGTGA 2 cut(s) 974, 995
AvaII GGWCC 1 cut(s) 497
BaeGI GKGCMC 1 cut(s) 710
BalI TGGCCA 1 cut(s) 359
BauI CACGAG 1 cut(s) 112
BbsI GAAGAC 1 cut(s) 899
BbvI GCAGC 2 cut(s) 388, 726
BccI CCATC 5 cut(s) 272, 462, 488, 560, 685
BceAI ACGGC 1 cut(s) 559
BciT130I CCWGG 3 cut(s) 303, 787, 1046
BciVI GTATCC 1 cut(s) 476
BcoDI GTCTC 2 cut(s) 225, 950
BcuI ACTAGT 1 cut(s) 976
BfaI CTAG 3 cut(s) 389, 759, 977
BfmI CTRYAG 2 cut(s) 210, 1104
BfrI CTTAAG 1 cut(s) 743
BfuI GTATCC 1 cut(s) 476
BisI GCNGC 2 cut(s) 402, 740
BlsI GCNGC 2 cut(s) 403, 741
Bme1390I CCNGG 3 cut(s) 303, 787, 1046
Bme18I GGWCC 1 cut(s) 497
BmgT120I GGNCC 1 cut(s) 497
BmiI GGNNCC 1 cut(s) 784
BmrFI CCNGG 3 cut(s) 303, 787, 1046
BmsI GCATC 1 cut(s) 1050
BpiI GAAGAC 1 cut(s) 899
BpmI CTGGAG 1 cut(s) 232
BpuEI CTTGAG 1 cut(s) 33
BsaJI CCNNGG 3 cut(s) 30, 79, 786
Bse1I ACTGG 1 cut(s) 775
Bse3DI GCAATG 2 cut(s) 259, 538
BseBI CCWGG 3 cut(s) 303, 787, 1046
BseDI CCNNGG 3 cut(s) 30, 79, 786
BseGI GGATG 6 cut(s) 700, 937, 1023, 1041, 1054, 1110
BseMI GCAATG 2 cut(s) 259, 538
BseNI ACTGG 1 cut(s) 775
BseRI GAGGAG 2 cut(s) 100, 932
BseSI GKGCMC 1 cut(s) 710
BseXI GCAGC 2 cut(s) 388, 726
Bsh1236I CGCG 2 cut(s) 326, 616
BshFI GGCC 2 cut(s) 306, 359
BsmAI GTCTC 2 cut(s) 225, 950
BsmBI CGTCTC 2 cut(s) 225, 950
BsnI GGCC 2 cut(s) 306, 359
Bsp1286I GDGCHC 1 cut(s) 710
Bsp143I GATC 3 cut(s) 83, 351, 873
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 1 cut(s) 242
BspANI GGCC 2 cut(s) 306, 359
BspCNI CTCAG 1 cut(s) 1155
BspFNI CGCG 2 cut(s) 326, 616
BspLI GGNNCC 1 cut(s) 784
BspPI GGATC 1 cut(s) 91
BspTI CTTAAG 1 cut(s) 743
BsrBI CCGCTC 1 cut(s) 244
BsrDI GCAATG 2 cut(s) 259, 538
BsrI ACTGG 1 cut(s) 775
BssECI CCNNGG 3 cut(s) 30, 79, 786
BssMI GATC 3 cut(s) 83, 351, 873
BssNAI GTATAC 2 cut(s) 136, 517
BssSI CACGAG 1 cut(s) 112
BssT1I CCWWGG 1 cut(s) 30
Bst1107I GTATAC 2 cut(s) 136, 517
Bst2BI CACGAG 1 cut(s) 112
Bst2UI CCWGG 3 cut(s) 303, 787, 1046
Bst4CI ACNGT 5 cut(s) 337, 488, 832, 1056, 1105
Bst6I CTCTTC 3 cut(s) 560, 633, 984
BstAFI CTTAAG 1 cut(s) 743
BstC8I GCNNGC 2 cut(s) 361, 604
BstDEI CTNAG 1 cut(s) 1142
BstDSI CCRYGG 2 cut(s) 30, 79
BstF5I GGATG 6 cut(s) 700, 937, 1023, 1041, 1054, 1110
BstFNI CGCG 2 cut(s) 326, 616
BstHHI GCGC 2 cut(s) 326, 616
BstKTI GATC 3 cut(s) 86, 354, 876
BstMAI GTCTC 2 cut(s) 225, 950
BstMBI GATC 3 cut(s) 83, 351, 873
BstNI CCWGG 3 cut(s) 303, 787, 1046
BstNSI RCATGY 1 cut(s) 706
BstSCI CCNGG 3 cut(s) 301, 785, 1044
BstSFI CTRYAG 2 cut(s) 210, 1104
BstSLI GKGCMC 1 cut(s) 710
BstUI CGCG 2 cut(s) 326, 616
BstV1I GCAGC 2 cut(s) 388, 726
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 1 cut(s) 83
BstXI CCANNNNNNTGG 1 cut(s) 314
BstYI RGATCY 1 cut(s) 83
BstZ17I GTATAC 2 cut(s) 136, 517
BsuI GTATCC 1 cut(s) 476
BsuRI GGCC 2 cut(s) 306, 359
BtgI CCRYGG 2 cut(s) 30, 79
BtsCI GGATG 6 cut(s) 700, 937, 1023, 1041, 1054, 1110
Cac8I GCNNGC 2 cut(s) 361, 604
CfoI GCGC 2 cut(s) 326, 616
Cfr13I GGNCC 1 cut(s) 497
CseI GACGC 2 cut(s) 315, 1052
Csp6I GTAC 2 cut(s) 523, 700
CviAII CATG 5 cut(s) 31, 526, 635, 703, 1090
CviQI GTAC 2 cut(s) 523, 700
DdeI CTNAG 1 cut(s) 1142
DpnI GATC 3 cut(s) 85, 353, 875
DpnII GATC 3 cut(s) 83, 351, 873
EaeI YGGCCR 1 cut(s) 357
Eam1104I CTCTTC 3 cut(s) 560, 633, 984
EarI CTCTTC 3 cut(s) 560, 633, 984
Eco130I CCWWGG 1 cut(s) 30
Eco47I GGWCC 1 cut(s) 497
Eco57I CTGAAG 1 cut(s) 426
EcoRII CCWGG 3 cut(s) 301, 785, 1044
EcoT14I CCWWGG 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 30
Esp3I CGTCTC 2 cut(s) 225, 950
FaeI CATG 5 cut(s) 34, 529, 638, 706, 1093
FalI AAGNNNNNCTT 2 cut(s) 1017, 1049
FatI CATG 5 cut(s) 30, 525, 634, 702, 1089
FauNDI CATATG 1 cut(s) 878
FblI GTMKAC 3 cut(s) 135, 516, 1107
Fnu4HI GCNGC 2 cut(s) 402, 740
FokI GGATG 6 cut(s) 707, 944, 1028, 1030, 1061, 1097
Fsp4HI GCNGC 2 cut(s) 402, 740
FspBI CTAG 3 cut(s) 389, 759, 977
GlaI GCGC 2 cut(s) 325, 615
GluI GCNGC 2 cut(s) 402, 740
GsuI CTGGAG 1 cut(s) 232
HaeIII GGCC 2 cut(s) 306, 359
HgaI GACGC 2 cut(s) 315, 1052
HhaI GCGC 2 cut(s) 326, 616
Hin1II CATG 5 cut(s) 34, 529, 638, 706, 1093
Hin6I GCGC 2 cut(s) 324, 614
HinP1I GCGC 2 cut(s) 324, 614
HinfI GANTC 3 cut(s) 195, 774, 904
HphI GGTGA 2 cut(s) 974, 995
Hpy166II GTNNAC 6 cut(s) 136, 219, 517, 847, 997, 1108
Hpy188I TCNGA 3 cut(s) 426, 779, 857
Hpy188III TCNNGA 4 cut(s) 330, 491, 911, 955
Hpy8I GTNNAC 6 cut(s) 136, 219, 517, 847, 997, 1108
Hpy99I CGWCG 3 cut(s) 331, 917, 1060
HpyAV CCTTC 5 cut(s) 401, 882, 1072, 1077, 1091
HpyCH4III ACNGT 5 cut(s) 337, 488, 832, 1056, 1105
HpyCH4IV ACGT 1 cut(s) 124
HpyCH4V TGCA 6 cut(s) 64, 224, 545, 606, 800, 1041
HpyF3I CTNAG 1 cut(s) 1142
HpySE526I ACGT 1 cut(s) 124
Hsp92II CATG 5 cut(s) 34, 529, 638, 706, 1093
HspAI GCGC 2 cut(s) 324, 614
Kzo9I GATC 3 cut(s) 83, 351, 873
Lsp1109I GCAGC 2 cut(s) 388, 726
LweI GCATC 1 cut(s) 1050
MaeI CTAG 3 cut(s) 389, 759, 977
MaeII ACGT 1 cut(s) 124
MaeIII GTNAC 3 cut(s) 120, 256, 665
MalI GATC 3 cut(s) 85, 353, 875
MbiI CCGCTC 1 cut(s) 244
MboI GATC 3 cut(s) 83, 351, 873
MboII GAAGA 8 cut(s) 78, 547, 596, 650, 899, 998, 1001, 1087
MflI RGATCY 1 cut(s) 83
MhlI GDGCHC 1 cut(s) 710
MlsI TGGCCA 1 cut(s) 359
MluCI AATT 4 cut(s) 419, 463, 935, 1007
MluNI TGGCCA 1 cut(s) 359
MlyI GAGTC 1 cut(s) 913
MmeI TCCRAC 2 cut(s) 849, 1009
Mox20I TGGCCA 1 cut(s) 359
MscI TGGCCA 1 cut(s) 359
MseI TTAA 4 cut(s) 92, 744, 834, 1023
MslI CAYNNNNRTG 2 cut(s) 689, 805
Msp20I TGGCCA 1 cut(s) 359
MspCI CTTAAG 1 cut(s) 743
MspR9I CCNGG 3 cut(s) 303, 787, 1046
MvaI CCWGG 3 cut(s) 303, 787, 1046
MvnI CGCG 2 cut(s) 326, 616
NcoI CCATGG 1 cut(s) 30
NdeI CATATG 1 cut(s) 878
NdeII GATC 3 cut(s) 83, 351, 873
NlaIII CATG 5 cut(s) 34, 529, 638, 706, 1093
NlaIV GGNNCC 1 cut(s) 784
NmuCI GTSAC 2 cut(s) 120, 665
NspI RCATGY 1 cut(s) 706
OliI CACNNNNGTG 1 cut(s) 805
PciI ACATGT 1 cut(s) 702
PfeI GAWTC 2 cut(s) 195, 774
PfoI TCCNGGA 1 cut(s) 1044
PkrI GCNGC 2 cut(s) 403, 741
PleI GAGTC 1 cut(s) 912
PpsI GAGTC 1 cut(s) 912
PscI ACATGT 1 cut(s) 702
PsiI TTATAA 1 cut(s) 342
Psp6I CCWGG 3 cut(s) 301, 785, 1044
PspGI CCWGG 3 cut(s) 301, 785, 1044
PspN4I GGNNCC 1 cut(s) 784
PspPI GGNCC 1 cut(s) 497
PsuI RGATCY 1 cut(s) 83
RsaI GTAC 2 cut(s) 524, 701
RsaNI GTAC 2 cut(s) 523, 700
RseI CAYNNNNRTG 2 cut(s) 689, 805
SaqAI TTAA 4 cut(s) 92, 744, 834, 1023
SatI GCNGC 2 cut(s) 402, 740
Sau3AI GATC 3 cut(s) 83, 351, 873
Sau96I GGNCC 1 cut(s) 497
SchI GAGTC 1 cut(s) 913
ScrFI CCNGG 3 cut(s) 303, 787, 1046
SduI GDGCHC 1 cut(s) 710
SetI ASST 9 cut(s) 127, 604, 633, 741, 841, 854, 969, 996, 1083
SfaNI GCATC 1 cut(s) 1050
SfcI CTRYAG 2 cut(s) 210, 1104
SinI GGWCC 1 cut(s) 497
SmiMI CAYNNNNRTG 2 cut(s) 689, 805
SmlI CTYRAG 2 cut(s) 48, 743
SmoI CTYRAG 2 cut(s) 48, 743
SpeI ACTAGT 1 cut(s) 976
Sse9I AATT 4 cut(s) 419, 463, 935, 1007
SsiI CCGC 1 cut(s) 242
SspMI CTAG 3 cut(s) 389, 759, 977
StyD4I CCNGG 3 cut(s) 301, 785, 1044
StyI CCWWGG 1 cut(s) 30
TaaI ACNGT 5 cut(s) 337, 488, 832, 1056, 1105
TaiI ACGT 1 cut(s) 127
TaqI TCGA 2 cut(s) 886, 954
TasI AATT 4 cut(s) 419, 463, 935, 1007
TatI WGTACW 2 cut(s) 522, 699
TfiI GAWTC 2 cut(s) 195, 774
Tru1I TTAA 4 cut(s) 92, 744, 834, 1023
Tru9I TTAA 4 cut(s) 92, 744, 834, 1023
TseFI GTSAC 2 cut(s) 120, 665
TseI GCWGC 2 cut(s) 401, 739
Tsp45I GTSAC 2 cut(s) 120, 665
TspDTI ATGAA 5 cut(s) 650, 651, 948, 1065, 1088
TspGWI ACGGA 2 cut(s) 96, 461
Vha464I CTTAAG 1 cut(s) 743
VpaK11BI GGWCC 1 cut(s) 497
XapI RAATTY 2 cut(s) 419, 463
XceI RCATGY 1 cut(s) 706
XmiI GTMKAC 3 cut(s) 135, 516, 1107
XspI CTAG 3 cut(s) 389, 759, 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.