Rh2BG286200

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
31531655 .. 31532021
367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG286200.1

Sequence Viewer

Length: 367 bp
ATGGCTTTTTTAGTTTGTTATCTTCTTGCCTTTGCGTTCTTCAATTATGCTGAAGCACAACAACAACAGTCTAATATAAGCAGGGGCTCTGCTTTAACACCCACTACCGACTCCTTATGGTTGTCTCGTTCCGGTATGTATGCCTTTGGCTTTTACAAGCAAGGCAATGGCTTTGCTGTGGGGATAGTTGTTGCTGGAGTCCCCCAAAAGACTGTGGTGTGGACTGCAGATCGAGATGGTGGACTAGTCTCAGACAATGCCACCTTGTTCTTCACAAGTGATGGGATTGCCTTGCAGTCGACAGAAGGGCGAAGTTTGGTGGTTGCTTCTCCAATGCCTATTTCTTCTGCTTCGATGCTTGATTCGG

Protein Analysis

122

Amino Acids

12.99

Weight (kDa)

4.66

Isoelectric Point (pI)

62.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 299
AcuI CTGAAG 1 cut(s) 72
AgsI TTSAA 1 cut(s) 43
AhlI ACTAGT 1 cut(s) 244
AjuI GAANNNNNNNTTGG 2 cut(s) 325, 357
Alw26I GTCTC 2 cut(s) 129, 253
BanII GRGCYC 1 cut(s) 89
BccI CCATC 2 cut(s) 230, 275
BcoDI GTCTC 2 cut(s) 129, 253
BcuI ACTAGT 1 cut(s) 244
BfaI CTAG 1 cut(s) 245
BfmI CTRYAG 1 cut(s) 225
BmsI GCATC 1 cut(s) 345
BpmI CTGGAG 1 cut(s) 216
BsaWI WCCGGW 1 cut(s) 131
Bse3DI GCAATG 1 cut(s) 172
BseMI GCAATG 1 cut(s) 172
BseMII CTCAG 1 cut(s) 264
BsiSI CCGG 1 cut(s) 132
BslFI GGGAC 1 cut(s) 185
BsmAI GTCTC 2 cut(s) 129, 253
BsmFI GGGAC 1 cut(s) 185
Bsp1286I GDGCHC 1 cut(s) 89
Bsp143I GATC 1 cut(s) 229
BspCNI CTCAG 1 cut(s) 263
BspMAI CTGCAG 1 cut(s) 229
BsrDI GCAATG 1 cut(s) 172
BssMI GATC 1 cut(s) 229
Bst4CI ACNGT 2 cut(s) 69, 214
BstDEI CTNAG 1 cut(s) 250
BstKTI GATC 1 cut(s) 232
BstMAI GTCTC 2 cut(s) 129, 253
BstMBI GATC 1 cut(s) 229
BstSFI CTRYAG 1 cut(s) 225
CviJI RGCY 4 cut(s) 5, 87, 150, 171
CviKI_1 RGCY 4 cut(s) 5, 87, 150, 171
DdeI CTNAG 1 cut(s) 250
DpnI GATC 1 cut(s) 231
DpnII GATC 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 89
Eco57I CTGAAG 1 cut(s) 72
EcoT38I GRGCYC 1 cut(s) 89
FaiI YATR 5 cut(s) 48, 77, 118, 137, 141
FaqI GGGAC 1 cut(s) 185
FblI GTMKAC 1 cut(s) 299
FriOI GRGCYC 1 cut(s) 89
FspBI CTAG 1 cut(s) 245
GsuI CTGGAG 1 cut(s) 216
HapII CCGG 1 cut(s) 132
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HinfI GANTC 3 cut(s) 110, 198, 362
HpaII CCGG 1 cut(s) 132
Hpy166II GTNNAC 3 cut(s) 222, 242, 300
Hpy188I TCNGA 1 cut(s) 253
Hpy188III TCNNGA 1 cut(s) 233
Hpy8I GTNNAC 3 cut(s) 222, 242, 300
HpyAV CCTTC 1 cut(s) 299
HpyCH4III ACNGT 2 cut(s) 69, 214
HpyCH4V TGCA 2 cut(s) 227, 295
HpyF3I CTNAG 1 cut(s) 250
Kzo9I GATC 1 cut(s) 229
LpnPI CCDG 3 cut(s) 67, 145, 180
LweI GCATC 1 cut(s) 345
MaeI CTAG 1 cut(s) 245
MalI GATC 1 cut(s) 231
MboI GATC 1 cut(s) 229
MboII GAAGA 4 cut(s) 14, 31, 262, 336
MhlI GDGCHC 1 cut(s) 89
MluCI AATT 1 cut(s) 43
MlyI GAGTC 2 cut(s) 104, 207
MseI TTAA 1 cut(s) 95
MspI CCGG 1 cut(s) 132
NdeII GATC 1 cut(s) 229
PfeI GAWTC 1 cut(s) 362
PleI GAGTC 2 cut(s) 104, 206
PpsI GAGTC 2 cut(s) 104, 206
PstI CTGCAG 1 cut(s) 229
SalI GTCGAC 1 cut(s) 298
SaqAI TTAA 1 cut(s) 95
Sau3AI GATC 1 cut(s) 229
SchI GAGTC 2 cut(s) 104, 207
SduI GDGCHC 1 cut(s) 89
SetI ASST 1 cut(s) 266
SfaNI GCATC 1 cut(s) 345
SfcI CTRYAG 1 cut(s) 225
SpeI ACTAGT 1 cut(s) 244
Sse9I AATT 1 cut(s) 43
SspMI CTAG 1 cut(s) 245
TaaI ACNGT 2 cut(s) 69, 214
TaqI TCGA 3 cut(s) 232, 299, 353
TasI AATT 1 cut(s) 43
TfiI GAWTC 1 cut(s) 362
Tru1I TTAA 1 cut(s) 95
Tru9I TTAA 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 299
XspI CTAG 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.