Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000479

Physical Location & Seq

Genomic Coordinates Forward (+)

30791107 .. 30793085

Gene Structure 1979 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49140

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGCCTATTTCTTCTGCTTCGATGCTGGATTCGGGTAATTATGTGCTGTACAATGCGAGTCGGGCAATAGTATGGCAAAGCTTCCTTTACCCAACTGATACCTTGTTGCCCACTCAACCACTGCTAGCAGGGAAGGAACTTCGGTCTACTAAATCAGAAACTGATCACTCATCAGGCATTTTCCGTCTCGCTATGCAAGTTGACGGAAACCTTGTCCAGTACCCTGTGGACACTCCACCATACTATTCATCTTTCACAAATGGAGCAGGATCAAATGTGTCGCTAAATTTTGGTGTTGATGGCCGTCTCTACTTGCTCAATGATACTGGTGGAAATTTAAAGAATATCAGCGAAAGAGAAATAGCTAAATGGTCATCTTCAACATATAGATGTAAACCTAAAGGTATATGTGGATATAATAGCTACTGTGTCACAATGGGGGAGGCGATTGATTGTAGATGTCTTCTTGGATTTGAATCTGTCAACCCGGGAAATCAGACTTCAGGTTGTGAGAGAAATTCTTCCATTGGAGATGTTTGCAGATCGAAGAATTGGAATTGCAACTACACCATGCAAGAACTGGGCAGAACCTGGTTGGAGGATGCGCCATATATGGTTCTGTCATCTTCAGGTAAAGAAGATTGCAAACAGGCCTGTTTGGAGGATTTGAACTGTCAGGCTGCAGTTCTTGAAGATGCAAGCTGTAGAAAGCAGAGGCTTCCTTTGAGATATGGAAGAAGATATGAGGGTACTTCGAAAGTAGTTTTCCTCAAGGAGGTTGTCATGTCTTCTGCAGCTCCAGCTCCAGATGCGGTTGTTCCAAAAGGAAGCAGGAAAAATGGTAGAATTGTATTCTTGATTATTGGCTTAATGAATGGGCTCAATAGTGATGCTAAGTGGAATGAGGATGTGGCTCCGCGACCATATGCTTATGAAGAGCTAGAAAAGATGACTAATAATTTCAATGAAGAGGTTGGTAGAGGAGCCTCAGGAACAGTTTACAAAGGGGTGATCGAAAATAGCCAAAAGCTAGTTGCCGTCAAGAGACTTGAGAAAGTTGCAGCTGAAGGCGACAAAGAATTTCAGACTGAAATGAGAATTATTGGCAGAACCCACCATCGGAATTTAGTCCGTTTACTTGGGTACTGTCTTGATGGACCAAAGAAGCTTTTGGTGTATGAGTACATGAGCAATGGTTCACTTGCAGATATACTCTTCACACCTGGGAGGAAACCTTATTGGGAAGAAAGAATGGGAGTTGCAAGGAACATAGCAAGAGGTTTTCTGTATCTCCATGAAGAATGTGATACACGGATCATTCACTGCGACATAAAACATCAAAACATACTGATGGATGAGTACATGTGCCCAAAAATCTCTGACTTCGGACTGGCCAAGCTGCTTCAGCCAGAGCAGACCAGAACCACTACTGGCATTAGAGGGACTAAAGGGTATGTTGCGCCTGAGTGGCATAGGAAAATGCCTATAACAGTTAAAGCAGATGTTTACAGCTTTGGAATTGTGTTGTTGGAGATTTTATGCTGTCGAAGGAATGTAGACTGGAGTCTTCCTCATGATGAAGCTATCTTGGATGAATTGGTCTACCATTATTTTGAGAGTGGAGAGCTCAGGAAATTGGTTGGGGATGAAAACATAGACAGAAAGCAATTGGAAAGGGTGGTTAAAGTGGGACTTTGGTGCATCCAGAATGAGCCATCACTCCGTCCTTCTATGAAGAAGGTTCTGCTTATGTTGGAAGGGACTGTAGATCTCCCAGTTCCTCCTAGTCCAAATTCATTTCTCAGTACCATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

604

Amino Acids

67.88

Weight (kDa)

7.42

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	5 - 44	1.6e-07	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	321 - 582	5.6e-45	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	322 - 582	2.1e-46	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000479)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23370 FvH4_1g23380
malus_domestica	MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica	Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis	pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis	RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata	RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora	Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa	Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha	Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana	Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	146, 1557, 1602
AccII	CGCG	1 cut(s)	919
AciI	CCGC	2 cut(s)	812, 917
AclWI	GGATC	2 cut(s)	277, 1322
AcoI	YGGCCR	2 cut(s)	301, 1392
AcsI	RAATTY	6 cut(s)	286, 334, 517, 1079, 1123, 1792
AcuI	CTGAAG	4 cut(s)	486, 612, 1086, 1388
AfaI	GTAC	7 cut(s)	50, 221, 751, 1145, 1184, 1361, 1807
AfiI	CCNNNNNNNGG	2 cut(s)	775, 1119
AflIII	ACRYGT	1 cut(s)	1362
AgsI	TTSAA	5 cut(s)	381, 476, 670, 692, 964
AjnI	CCWGG	2 cut(s)	590, 1222
Alw21I	GWGCWC	1 cut(s)	1629
Alw26I	GTCTC	3 cut(s)	191, 311, 1039
AlwI	GGATC	2 cut(s)	277, 1322
AlwNI	CAGNNNCTG	2 cut(s)	161, 591
Ama87I	CYCGRG	1 cut(s)	487
AoxI	GGCC	3 cut(s)	301, 651, 1392
ApeKI	GCWGC	4 cut(s)	680, 794, 1061, 1399
ApoI	RAATTY	6 cut(s)	286, 334, 517, 1079, 1123, 1792
Asp700I	GAANNNNTTC	1 cut(s)	520
AspLEI	GCGC	2 cut(s)	607, 1462
AspS9I	GGNCC	1 cut(s)	1157
AsuC2I	CCSGG	2 cut(s)	488, 489
AsuHPI	GGTGA	1 cut(s)	1021
AsuII	TTCGAA	1 cut(s)	755
AsuNHI	GCTAGC	1 cut(s)	124
AvaI	CYCGRG	1 cut(s)	487
AvaII	GGWCC	1 cut(s)	1157
AxyI	CCTNAGG	1 cut(s)	988
BaeGI	GKGCMC	1 cut(s)	1370
BalI	TGGCCA	1 cut(s)	1394
BanII	GRGCYC	2 cut(s)	882, 1629
BbsI	GAAGAC	3 cut(s)	455, 780, 1559
Bbv12I	GWGCWC	1 cut(s)	1629
BbvI	GCAGC	4 cut(s)	667, 806, 1073, 1386
BccI	CCATC	5 cut(s)	293, 1125, 1148, 1345, 1723
BceAI	ACGGC	2 cut(s)	288, 1022
BciT130I	CCWGG	2 cut(s)	592, 1224
BclI	TGATCA	1 cut(s)	163
BcnI	CCSGG	2 cut(s)	488, 489
BcoDI	GTCTC	3 cut(s)	191, 311, 1039
BfaI	CTAG	5 cut(s)	125, 941, 1031, 1785, 1813
BfmI	CTRYAG	4 cut(s)	681, 703, 792, 1764
BglI	GCCNNNNNGGC	1 cut(s)	1468
BglII	AGATCT	1 cut(s)	1768
BisI	GCNGC	4 cut(s)	681, 795, 1062, 1400
BlsI	GCNGC	4 cut(s)	682, 796, 1063, 1401
Bme1390I	CCNGG	4 cut(s)	488, 489, 592, 1224
Bme18I	GGWCC	1 cut(s)	1157
BmeT110I	CYCGRG	1 cut(s)	487
BmgT120I	GGNCC	1 cut(s)	1157
BmiI	GGNNCC	2 cut(s)	915, 985
BmrFI	CCNGG	4 cut(s)	488, 489, 592, 1224
BmrI	ACTGGG	2 cut(s)	590, 1769
BmsI	GCATC	6 cut(s)	12, 592, 685, 799, 880, 1710
BmtI	GCTAGC	1 cut(s)	128
BmuI	ACTGGG	2 cut(s)	590, 1769
BoxI	GACNNNNGTC	1 cut(s)	1563
BpiI	GAAGAC	3 cut(s)	455, 780, 1559
BplI	GAGNNNNNCTC	2 cut(s)	1555, 1587
BpmI	CTGGAG	3 cut(s)	783, 789, 1582
Bpu10I	CCTNAGC	1 cut(s)	1628
Bpu14I	TTCGAA	1 cut(s)	755
BpuEI	CTTGAG	2 cut(s)	755, 1070
BpuMI	CCSGG	2 cut(s)	488, 489
BsaBI	GATNNNNATC	1 cut(s)	475
BsaJI	CCNNGG	2 cut(s)	487, 1223
Bsc4I	CCNNNNNNNGG	2 cut(s)	775, 1119
Bse1I	ACTGG	7 cut(s)	217, 331, 585, 1395, 1435, 1565, 1775
Bse21I	CCTNAGG	1 cut(s)	988
Bse3DI	GCAATG	1 cut(s)	1198
Bse8I	GATNNNNATC	1 cut(s)	475
BseBI	CCWGG	2 cut(s)	592, 1224
BseDI	CCNNGG	2 cut(s)	487, 1223
BseGI	GGATG	6 cut(s)	607, 913, 1360, 1597, 1651, 1701
BseJI	GATNNNNATC	1 cut(s)	475
BseLI	CCNNNNNNNGG	2 cut(s)	775, 1119
BseMI	GCAATG	1 cut(s)	1198
BseMII	CTCAG	3 cut(s)	1002, 1455, 1642
BseNI	ACTGG	7 cut(s)	217, 331, 585, 1395, 1435, 1565, 1775
BseRI	GAGGAG	1 cut(s)	996
BseSI	GKGCMC	1 cut(s)	1370
BseXI	GCAGC	4 cut(s)	667, 806, 1073, 1386
Bsh1236I	CGCG	1 cut(s)	919
BshFI	GGCC	3 cut(s)	303, 653, 1394
BsiHKAI	GWGCWC	1 cut(s)	1629
BsiHKCI	CYCGRG	1 cut(s)	487
BsiSI	CCGG	1 cut(s)	488
BslFI	GGGAC	3 cut(s)	1456, 1704, 1774
BslI	CCNNNNNNNGG	2 cut(s)	775, 1119
BsmAI	GTCTC	3 cut(s)	191, 311, 1039
BsmBI	CGTCTC	2 cut(s)	191, 311
BsmFI	GGGAC	3 cut(s)	1456, 1704, 1774
BsnI	GGCC	3 cut(s)	303, 653, 1394
BsoBI	CYCGRG	1 cut(s)	487
Bsp119I	TTCGAA	1 cut(s)	755
Bsp1286I	GDGCHC	3 cut(s)	882, 1370, 1629
Bsp1407I	TGTACA	1 cut(s)	48
Bsp143I	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
BspACI	CCGC	2 cut(s)	812, 917
BspANI	GGCC	3 cut(s)	303, 653, 1394
BspCNI	CTCAG	4 cut(s)	1001, 1456, 1641, 1815
BspFNI	CGCG	1 cut(s)	919
BspHI	TCATGA	1 cut(s)	1573
BspLI	GGNNCC	2 cut(s)	915, 985
BspMAI	CTGCAG	2 cut(s)	685, 796
BspOI	GCTAGC	1 cut(s)	128
BspPI	GGATC	2 cut(s)	277, 1322
BspQI	GCTCTTC	1 cut(s)	930
BspT104I	TTCGAA	1 cut(s)	755
BsrDI	GCAATG	1 cut(s)	1198
BsrGI	TGTACA	1 cut(s)	48
BsrI	ACTGG	7 cut(s)	217, 331, 585, 1395, 1435, 1565, 1775
BssECI	CCNNGG	2 cut(s)	487, 1223
BssMI	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
Bst2UI	CCWGG	2 cut(s)	592, 1224
Bst4CI	ACNGT	6 cut(s)	428, 674, 997, 1148, 1492, 1765
Bst6I	CTCTTC	3 cut(s)	930, 963, 1220
BstAUI	TGTACA	1 cut(s)	48
BstBI	TTCGAA	1 cut(s)	755
BstC8I	GCNNGC	2 cut(s)	126, 700
BstDEI	CTNAG	5 cut(s)	894, 988, 1464, 1628, 1802
BstENI	CCTNNNNNAGG	1 cut(s)	773
BstF5I	GGATG	6 cut(s)	607, 913, 1360, 1597, 1651, 1701
BstFNI	CGCG	1 cut(s)	919
BstHHI	GCGC	2 cut(s)	607, 1462
BstKTI	GATC	6 cut(s)	166, 272, 545, 1014, 1317, 1771
BstMAI	GTCTC	3 cut(s)	191, 311, 1039
BstMBI	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
BstMWI	GCNNNNNNNGC	5 cut(s)	62, 800, 809, 1405, 1468
BstNI	CCWGG	2 cut(s)	592, 1224
BstNSI	RCATGY	1 cut(s)	1366
BstPAI	GACNNNNGTC	1 cut(s)	1563
BstSCI	CCNGG	4 cut(s)	486, 487, 590, 1222
BstSFI	CTRYAG	4 cut(s)	681, 703, 792, 1764
BstSLI	GKGCMC	1 cut(s)	1370
BstUI	CGCG	1 cut(s)	919
BstV1I	GCAGC	4 cut(s)	667, 806, 1073, 1386
BstV2I	GAAGAC	3 cut(s)	455, 780, 1559
BstX2I	RGATCY	1 cut(s)	1768
BstYI	RGATCY	1 cut(s)	1768
Bsu36I	CCTNAGG	1 cut(s)	988
BsuRI	GGCC	3 cut(s)	303, 653, 1394
BtsCI	GGATG	6 cut(s)	607, 913, 1360, 1597, 1651, 1701
BtsI	GCAGTG	2 cut(s)	119, 1321
BtsIMutI	CAGTG	2 cut(s)	119, 1321
Cac8I	GCNNGC	2 cut(s)	126, 700
CaiI	CAGNNNCTG	2 cut(s)	161, 591
CciI	TCATGA	1 cut(s)	1573
CfoI	GCGC	2 cut(s)	607, 1462
Cfr13I	GGNCC	1 cut(s)	1157
Cfr9I	CCCGGG	1 cut(s)	487
CsiI	ACCWGGT	1 cut(s)	590
Csp6I	GTAC	7 cut(s)	49, 220, 750, 1144, 1183, 1360, 1806
CviAII	CATG	6 cut(s)	571, 784, 1186, 1295, 1363, 1574
CviQI	GTAC	7 cut(s)	49, 220, 750, 1144, 1183, 1360, 1806
DdeI	CTNAG	5 cut(s)	894, 988, 1464, 1628, 1802
DpnI	GATC	6 cut(s)	165, 271, 544, 1013, 1316, 1770
DpnII	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
DraI	TTTAAA	1 cut(s)	339
EaeI	YGGCCR	2 cut(s)	301, 1392
Eam1104I	CTCTTC	3 cut(s)	930, 963, 1220
EarI	CTCTTC	3 cut(s)	930, 963, 1220
Ecl136II	GAGCTC	1 cut(s)	1627
Eco147I	AGGCCT	1 cut(s)	653
Eco24I	GRGCYC	2 cut(s)	882, 1629
Eco47I	GGWCC	1 cut(s)	1157
Eco53kI	GAGCTC	1 cut(s)	1627
Eco57I	CTGAAG	4 cut(s)	486, 612, 1086, 1388
Eco81I	CCTNAGG	1 cut(s)	988
Eco88I	CYCGRG	1 cut(s)	487
EcoICRI	GAGCTC	1 cut(s)	1627
EcoNI	CCTNNNNNAGG	1 cut(s)	773
EcoRII	CCWGG	2 cut(s)	590, 1222
EcoT38I	GRGCYC	2 cut(s)	882, 1629
Esp3I	CGTCTC	2 cut(s)	191, 311
FaeI	CATG	6 cut(s)	574, 787, 1189, 1298, 1366, 1577
FalI	AAGNNNNNCTT	2 cut(s)	1677, 1709
FaqI	GGGAC	3 cut(s)	1456, 1704, 1774
FatI	CATG	6 cut(s)	570, 783, 1185, 1294, 1362, 1573
FauNDI	CATATG	1 cut(s)	925
FbaI	TGATCA	1 cut(s)	163
FblI	GTMKAC	3 cut(s)	146, 1557, 1602
Fnu4HI	GCNGC	4 cut(s)	681, 795, 1062, 1400
FokI	GGATG	6 cut(s)	614, 920, 1367, 1604, 1658, 1688
FriOI	GRGCYC	2 cut(s)	882, 1629
Fsp4HI	GCNGC	4 cut(s)	681, 795, 1062, 1400
FspBI	CTAG	5 cut(s)	125, 941, 1031, 1785, 1813
GlaI	GCGC	2 cut(s)	606, 1461
GluI	GCNGC	4 cut(s)	681, 795, 1062, 1400
GsuI	CTGGAG	3 cut(s)	783, 789, 1582
HaeIII	GGCC	3 cut(s)	303, 653, 1394
HapII	CCGG	1 cut(s)	488
HhaI	GCGC	2 cut(s)	607, 1462
Hin1II	CATG	6 cut(s)	574, 787, 1189, 1298, 1366, 1577
Hin6I	GCGC	2 cut(s)	605, 1460
HinP1I	GCGC	2 cut(s)	605, 1460
HincII	GTYRAC	2 cut(s)	202, 484
HindII	GTYRAC	2 cut(s)	202, 484
HindIII	AAGCTT	2 cut(s)	79, 1166
HinfI	GANTC	4 cut(s)	29, 58, 476, 1564
HpaII	CCGG	1 cut(s)	488
HphI	GGTGA	1 cut(s)	1021
Hpy188I	TCNGA	6 cut(s)	157, 498, 1086, 1122, 1381, 1388
Hpy188III	TCNNGA	9 cut(s)	689, 806, 856, 990, 1042, 1151, 1574, 1630, 1705
HpyAV	CCTTC	6 cut(s)	127, 1061, 1542, 1732, 1737, 1751
HpyCH4III	ACNGT	6 cut(s)	428, 674, 997, 1148, 1492, 1765
HpyF10VI	GCNNNNNNNGC	5 cut(s)	62, 800, 809, 1405, 1468
HpyF3I	CTNAG	5 cut(s)	894, 988, 1464, 1628, 1802
Hsp92II	CATG	6 cut(s)	574, 787, 1189, 1298, 1366, 1577
HspAI	GCGC	2 cut(s)	605, 1460
Ksp22I	TGATCA	1 cut(s)	163
Kzo9I	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
LguI	GCTCTTC	1 cut(s)	930
LmnI	GCTCC	5 cut(s)	263, 802, 808, 919, 983
Lsp1109I	GCAGC	4 cut(s)	667, 806, 1073, 1386
LweI	GCATC	6 cut(s)	12, 592, 685, 799, 880, 1710
MabI	ACCWGGT	1 cut(s)	590
MaeI	CTAG	5 cut(s)	125, 941, 1031, 1785, 1813
MaeIII	GTNAC	1 cut(s)	430
MalI	GATC	6 cut(s)	165, 271, 544, 1013, 1316, 1770
MboI	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
MfeI	CAATTG	1 cut(s)	1667
MflI	RGATCY	1 cut(s)	1768
MhlI	GDGCHC	3 cut(s)	882, 1370, 1629
MlsI	TGGCCA	1 cut(s)	1394
MluNI	TGGCCA	1 cut(s)	1394
MlyI	GAGTC	2 cut(s)	67, 1573
MmeI	TCCRAC	3 cut(s)	576, 1509, 1734
Mox20I	TGGCCA	1 cut(s)	1394
MroXI	GAANNNNTTC	1 cut(s)	520
MscI	TGGCCA	1 cut(s)	1394
MseI	TTAA	4 cut(s)	338, 869, 1494, 1683
MslI	CAYNNNNRTG	2 cut(s)	388, 1349
Msp20I	TGGCCA	1 cut(s)	1394
MspA1I	CMGCKG	1 cut(s)	1064
MspI	CCGG	1 cut(s)	488
MspR9I	CCNGG	4 cut(s)	488, 489, 592, 1224
MunI	CAATTG	1 cut(s)	1667
MvaI	CCWGG	2 cut(s)	592, 1224
MvnI	CGCG	1 cut(s)	919
MwoI	GCNNNNNNNGC	5 cut(s)	62, 800, 809, 1405, 1468
NciI	CCSGG	2 cut(s)	488, 489
NdeI	CATATG	1 cut(s)	925
NdeII	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
NheI	GCTAGC	1 cut(s)	124
NlaIII	CATG	6 cut(s)	574, 787, 1189, 1298, 1366, 1577
NlaIV	GGNNCC	2 cut(s)	915, 985
NmuCI	GTSAC	1 cut(s)	430
NspI	RCATGY	1 cut(s)	1366
NspV	TTCGAA	1 cut(s)	755
PagI	TCATGA	1 cut(s)	1573
PceI	AGGCCT	1 cut(s)	653
PciI	ACATGT	1 cut(s)	1362
PciSI	GCTCTTC	1 cut(s)	930
PdmI	GAANNNNTTC	1 cut(s)	520
PfeI	GAWTC	2 cut(s)	29, 476
PkrI	GCNGC	4 cut(s)	682, 796, 1063, 1401
PleI	GAGTC	2 cut(s)	66, 1572
PpsI	GAGTC	2 cut(s)	66, 1572
PscI	ACATGT	1 cut(s)	1362
PshAI	GACNNNNGTC	1 cut(s)	1563
Psp124BI	GAGCTC	1 cut(s)	1629
Psp6I	CCWGG	2 cut(s)	590, 1222
PspGI	CCWGG	2 cut(s)	590, 1222
PspN4I	GGNNCC	2 cut(s)	915, 985
PspPI	GGNCC	1 cut(s)	1157
PstI	CTGCAG	2 cut(s)	685, 796
PstNI	CAGNNNCTG	2 cut(s)	161, 591
PsuI	RGATCY	1 cut(s)	1768
PvuII	CAGCTG	1 cut(s)	1064
RsaI	GTAC	7 cut(s)	50, 221, 751, 1145, 1184, 1361, 1807
RsaNI	GTAC	7 cut(s)	49, 220, 750, 1144, 1183, 1360, 1806
RseI	CAYNNNNRTG	2 cut(s)	388, 1349
SacI	GAGCTC	1 cut(s)	1629
SapI	GCTCTTC	1 cut(s)	930
SaqAI	TTAA	4 cut(s)	338, 869, 1494, 1683
SatI	GCNGC	4 cut(s)	681, 795, 1062, 1400
Sau3AI	GATC	6 cut(s)	163, 269, 542, 1011, 1314, 1768
Sau96I	GGNCC	1 cut(s)	1157
SchI	GAGTC	2 cut(s)	67, 1573
ScrFI	CCNGG	4 cut(s)	488, 489, 592, 1224
SduI	GDGCHC	3 cut(s)	882, 1370, 1629
SexAI	ACCWGGT	1 cut(s)	590
SfaNI	GCATC	6 cut(s)	12, 592, 685, 799, 880, 1710
SfcI	CTRYAG	4 cut(s)	681, 703, 792, 1764
SfuI	TTCGAA	1 cut(s)	755
SinI	GGWCC	1 cut(s)	1157
SmaI	CCCGGG	1 cut(s)	489
SmiMI	CAYNNNNRTG	2 cut(s)	388, 1349
SmlI	CTYRAG	2 cut(s)	770, 1049
SmoI	CTYRAG	2 cut(s)	770, 1049
SseBI	AGGCCT	1 cut(s)	653
SsiI	CCGC	2 cut(s)	812, 917
SspMI	CTAG	5 cut(s)	125, 941, 1031, 1785, 1813
SstI	GAGCTC	1 cut(s)	1629
StuI	AGGCCT	1 cut(s)	653
StyD4I	CCNGG	4 cut(s)	486, 487, 590, 1222
TaaI	ACNGT	6 cut(s)	428, 674, 997, 1148, 1492, 1765
TaqI	TCGA	5 cut(s)	20, 545, 755, 1014, 1546
TaqII	GACCGA	1 cut(s)	132
TatI	WGTACW	3 cut(s)	48, 1182, 1359
TfiI	GAWTC	2 cut(s)	29, 476
Tru1I	TTAA	4 cut(s)	338, 869, 1494, 1683
Tru9I	TTAA	4 cut(s)	338, 869, 1494, 1683
TscAI	CASTG	2 cut(s)	126, 1328
TseFI	GTSAC	1 cut(s)	430
TseI	GCWGC	4 cut(s)	680, 794, 1061, 1399
Tsp45I	GTSAC	1 cut(s)	430
TspGWI	ACGGA	5 cut(s)	173, 219, 1121, 1327, 1712
TspMI	CCCGGG	1 cut(s)	487
TspRI	CASTG	2 cut(s)	126, 1328
VpaK11BI	GGWCC	1 cut(s)	1157
XagI	CCTNNNNNAGG	1 cut(s)	773
XapI	RAATTY	6 cut(s)	286, 334, 517, 1079, 1123, 1792
XceI	RCATGY	1 cut(s)	1366
XcmI	CCANNNNNNNNNTGG	1 cut(s)	577
XmaI	CCCGGG	1 cut(s)	487
XmiI	GTMKAC	3 cut(s)	146, 1557, 1602
XmnI	GAANNNNTTC	1 cut(s)	520
XspI	CTAG	5 cut(s)	125, 941, 1031, 1785, 1813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.