Rmu_sc0017451.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017451.1
Physical Location & Seq
Forward (+)
606 .. 1293
688 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017451.1_g000001.1.cds

Sequence Viewer

Length: 688 bp
atggctattatagtttgttatcttcttgccgttgcattcttcaattatgctgaagcacaactgcagtctaatataagcaggggctcttctttaacacccactacgaactcctcatggttgtctcgttccggtatgtatgccttcggcttttacaagcaaggcaatggctttgccgtggggatagttgttgctgcagtccccgaaaagactgtggtgtggactgcagatcgagatggtggactagtctcaaacaatgccaccttgttcttcacaagtgatgggattgccttgcagtcgacacaaggccgaagtttggtggttgagtctccaatgcctatttcttctgcttcgatgcttgattcgggtaattttgtgctgtacaatgcgagtcgggcaatagtatggcaaagcttcctgtacccaactgataccttgttgcccactcaaccactgctagcagggaaggaacttcggtctgctaaatcagaaactgatcactcatcaggcatttttcgtctcgctatgcaagttgacggaaaccttgtccagtatcctgtggacactccaccagtatctcaatatgcgtactatgcatctctcacagatagagcaggatcaaatgtgtcgctaaattttggtgttgatagccgtctctacttgctcaatgatactggtggaaatttaaaga

Protein Analysis

229

Amino Acids

24.67

Weight (kDa)

5.31

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 296
AclWI GGATC 1 cut(s) 622
AcsI RAATTY 2 cut(s) 631, 679
AcuI CTGAAG 1 cut(s) 72
AfaI GTAC 3 cut(s) 380, 419, 587
AfiI CCNNNNNNNGG 1 cut(s) 313
AgsI TTSAA 1 cut(s) 43
AhlI ACTAGT 1 cut(s) 241
AjuI GAANNNNNNNTTGG 2 cut(s) 322, 354
AluBI AGCT 1 cut(s) 411
AluI AGCT 1 cut(s) 411
Alw26I GTCTC 5 cut(s) 126, 250, 330, 521, 656
AlwI GGATC 1 cut(s) 622
AlwNI CAGNNNCTG 1 cut(s) 491
AoxI GGCC 1 cut(s) 304
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 2 cut(s) 631, 679
AsuNHI GCTAGC 1 cut(s) 454
BanII GRGCYC 1 cut(s) 86
BbvI GCAGC 1 cut(s) 178
BccI CCATC 2 cut(s) 227, 272
BceAI ACGGC 3 cut(s) 14, 158, 633
BciVI GTATCC 1 cut(s) 561
BclI TGATCA 1 cut(s) 493
BcoDI GTCTC 5 cut(s) 126, 250, 330, 521, 656
BcuI ACTAGT 1 cut(s) 241
BfaI CTAG 2 cut(s) 242, 455
BfmI CTRYAG 3 cut(s) 62, 192, 222
BfuI GTATCC 1 cut(s) 561
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
BmsI GCATC 2 cut(s) 342, 602
BmtI GCTAGC 1 cut(s) 458
BsaJI CCNNGG 1 cut(s) 174
BsaWI WCCGGW 1 cut(s) 128
Bsc4I CCNNNNNNNGG 1 cut(s) 313
Bse1I ACTGG 3 cut(s) 547, 569, 676
Bse3DI GCAATG 1 cut(s) 169
BseDI CCNNGG 1 cut(s) 174
BseLI CCNNNNNNNGG 1 cut(s) 313
BseMI GCAATG 1 cut(s) 169
BseNI ACTGG 3 cut(s) 547, 569, 676
BseRI GAGGAG 1 cut(s) 100
BseXI GCAGC 1 cut(s) 178
BshFI GGCC 1 cut(s) 306
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 182
BslI CCNNNNNNNGG 1 cut(s) 313
BsmAI GTCTC 5 cut(s) 126, 250, 330, 521, 656
BsmBI CGTCTC 2 cut(s) 521, 656
BsmFI GGGAC 1 cut(s) 182
BsmI GAATGC 1 cut(s) 35
BsnI GGCC 1 cut(s) 306
Bsp1286I GDGCHC 1 cut(s) 86
Bsp1407I TGTACA 1 cut(s) 378
Bsp143I GATC 3 cut(s) 226, 493, 614
BspANI GGCC 1 cut(s) 306
BspMAI CTGCAG 3 cut(s) 66, 196, 226
BspOI GCTAGC 1 cut(s) 458
BspPI GGATC 1 cut(s) 622
BspQI GCTCTTC 1 cut(s) 91
BsrDI GCAATG 1 cut(s) 169
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 3 cut(s) 547, 569, 676
BssECI CCNNGG 1 cut(s) 174
BssMI GATC 3 cut(s) 226, 493, 614
Bst4CI ACNGT 1 cut(s) 211
Bst6I CTCTTC 1 cut(s) 91
BstAUI TGTACA 1 cut(s) 378
BstC8I GCNNGC 1 cut(s) 456
BstDSI CCRYGG 1 cut(s) 174
BstKTI GATC 3 cut(s) 229, 496, 617
BstMAI GTCTC 5 cut(s) 126, 250, 330, 521, 656
BstMBI GATC 3 cut(s) 226, 493, 614
BstMWI GCNNNNNNNGC 2 cut(s) 392, 590
BstSFI CTRYAG 3 cut(s) 62, 192, 222
BstV1I GCAGC 1 cut(s) 178
BsuI GTATCC 1 cut(s) 561
BsuRI GGCC 1 cut(s) 306
BtgI CCRYGG 1 cut(s) 174
BtsI GCAGTG 1 cut(s) 449
BtsIMutI CAGTG 1 cut(s) 449
Cac8I GCNNGC 1 cut(s) 456
CaiI CAGNNNCTG 1 cut(s) 491
Csp6I GTAC 3 cut(s) 379, 418, 586
CviAII CATG 1 cut(s) 114
CviJI RGCY 7 cut(s) 5, 84, 147, 168, 306, 411, 648
CviKI_1 RGCY 7 cut(s) 5, 84, 147, 168, 306, 411, 648
CviQI GTAC 3 cut(s) 379, 418, 586
DpnI GATC 3 cut(s) 228, 495, 616
DpnII GATC 3 cut(s) 226, 493, 614
DraI TTTAAA 1 cut(s) 684
Eam1104I CTCTTC 1 cut(s) 91
EarI CTCTTC 1 cut(s) 91
Eco24I GRGCYC 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 72
EcoT22I ATGCAT 1 cut(s) 595
EcoT38I GRGCYC 1 cut(s) 86
Esp3I CGTCTC 2 cut(s) 521, 656
FaeI CATG 1 cut(s) 117
FaqI GGGAC 1 cut(s) 182
FatI CATG 1 cut(s) 113
FbaI TGATCA 1 cut(s) 493
FblI GTMKAC 1 cut(s) 296
Fnu4HI GCNGC 1 cut(s) 192
FriOI GRGCYC 1 cut(s) 86
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 2 cut(s) 242, 455
GluI GCNGC 1 cut(s) 192
HaeIII GGCC 1 cut(s) 306
HapII CCGG 1 cut(s) 129
Hin1II CATG 1 cut(s) 117
HincII GTYRAC 2 cut(s) 297, 532
HindII GTYRAC 2 cut(s) 297, 532
HindIII AAGCTT 1 cut(s) 409
HinfI GANTC 3 cut(s) 323, 359, 388
HpaII CCGG 1 cut(s) 129
Hpy166II GTNNAC 5 cut(s) 219, 239, 297, 532, 559
Hpy188I TCNGA 1 cut(s) 487
Hpy188III TCNNGA 1 cut(s) 230
Hpy8I GTNNAC 5 cut(s) 219, 239, 297, 532, 559
HpyAV CCTTC 2 cut(s) 151, 457
HpyCH4III ACNGT 1 cut(s) 211
HpyCH4V TGCA 7 cut(s) 35, 64, 194, 224, 292, 526, 593
HpyF10VI GCNNNNNNNGC 2 cut(s) 392, 590
Hsp92II CATG 1 cut(s) 117
Ksp22I TGATCA 1 cut(s) 493
Kzo9I GATC 3 cut(s) 226, 493, 614
LguI GCTCTTC 1 cut(s) 91
Lsp1109I GCAGC 1 cut(s) 178
LweI GCATC 2 cut(s) 342, 602
MaeI CTAG 2 cut(s) 242, 455
MalI GATC 3 cut(s) 228, 495, 616
MboI GATC 3 cut(s) 226, 493, 614
MboII GAAGA 5 cut(s) 14, 31, 78, 259, 333
MhlI GDGCHC 1 cut(s) 86
MluCI AATT 4 cut(s) 43, 367, 631, 679
MlyI GAGTC 2 cut(s) 332, 397
MnlI CCTC 1 cut(s) 121
Mph1103I ATGCAT 1 cut(s) 595
MseI TTAA 2 cut(s) 92, 683
MspI CCGG 1 cut(s) 129
Mva1269I GAATGC 1 cut(s) 35
MwoI GCNNNNNNNGC 2 cut(s) 392, 590
NdeII GATC 3 cut(s) 226, 493, 614
NheI GCTAGC 1 cut(s) 454
NlaIII CATG 1 cut(s) 117
NsiI ATGCAT 1 cut(s) 595
PciSI GCTCTTC 1 cut(s) 91
PctI GAATGC 1 cut(s) 35
PfeI GAWTC 1 cut(s) 359
PkrI GCNGC 1 cut(s) 193
PleI GAGTC 2 cut(s) 331, 396
PpsI GAGTC 2 cut(s) 331, 396
PstI CTGCAG 3 cut(s) 66, 196, 226
PstNI CAGNNNCTG 1 cut(s) 491
RsaI GTAC 3 cut(s) 380, 419, 587
RsaNI GTAC 3 cut(s) 379, 418, 586
SalI GTCGAC 1 cut(s) 295
SapI GCTCTTC 1 cut(s) 91
SaqAI TTAA 2 cut(s) 92, 683
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 3 cut(s) 226, 493, 614
SchI GAGTC 2 cut(s) 332, 397
SduI GDGCHC 1 cut(s) 86
SetI ASST 4 cut(s) 263, 413, 434, 543
SfaNI GCATC 2 cut(s) 342, 602
SfcI CTRYAG 3 cut(s) 62, 192, 222
SpeI ACTAGT 1 cut(s) 241
Sse9I AATT 4 cut(s) 43, 367, 631, 679
SspMI CTAG 2 cut(s) 242, 455
TaaI ACNGT 1 cut(s) 211
TaqI TCGA 3 cut(s) 229, 296, 350
TaqII GACCGA 1 cut(s) 462
TasI AATT 4 cut(s) 43, 367, 631, 679
TatI WGTACW 1 cut(s) 378
TfiI GAWTC 1 cut(s) 359
Tru1I TTAA 2 cut(s) 92, 683
Tru9I TTAA 2 cut(s) 92, 683
TscAI CASTG 1 cut(s) 456
TseI GCWGC 1 cut(s) 191
TspGWI ACGGA 1 cut(s) 549
TspRI CASTG 1 cut(s) 456
XapI RAATTY 2 cut(s) 631, 679
XmiI GTMKAC 1 cut(s) 296
XspI CTAG 2 cut(s) 242, 455
Zsp2I ATGCAT 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.