Rmu_co8418889.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8418889.1
Physical Location & Seq
Reverse (-)
1 .. 1345
1345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8418889.1_g000001.1.cds

Sequence Viewer

Length: 1311 bp
atggaagctgaatgcaaatgccttccgggattcgagtctatcaccccgggggatcaggcttcaggctgtgggaggaatatagttgcagatatttgcgagtcagagaatgaaaacttcacatacatcatggaggaactgcccagcacaagatgggaaaatgttgcatacatgacctggtcatcatcagacaaagaagaatgcaacaaggcctgcttggaggattgcaactgtgaagccgcactttacgcagatggaagctgcagaaagcagaggcttcctttgaatcttggaagaagaaagttagatacttcaaactcagctttcatcaaggttggtatttgtaaacctccagctacagataatattatccacccaaagggaaacaagaaagaaggtcgagttgcagtccttattcttggagtttcatttactgtttttgggtccattttgttggtgatctctgtaattgtgttttggaaacataatgtatgggcttataaaaggatgaataagctcaatggtgatgttgaatggaatgaggacgtggctccgcgaccatatgcttatgaacaactagagaagatgactgataatttcaaggaggaggttggtagaggagcttctgcaacagtttataaaggggtgatgttgagttgccaaaagctagttgctgtgaagaaactagagaaagttgcagctgaagaagcaaaagaattccagactgagatgaaagttattggcagaactcatcaccgtagtttagtacgtttgcttgggtattgccttgatggcccaaagaagcttttggtgtatgagtacatgagcaatggatcacttgcagatatactcttcacacctgagaggaaaccttattgggaagaaagaatggaaatagctcgaaacatagcacgagggtttctttatctgcatgaagagtgtgatacacagatcatccactgtgacataaagcctcaaaacatactgatggatgagtacatgtgccccaaaatctctgactttggtttggcaaagttgcttcagcaagaccagactagaaccactaccggaattagagggactaaagggtatgttgcgcccgagtggcataggaaaatgcctattacagttaaagcagatgtttatagctttggaattgtgttgttggagattgtgtgctgtcgaaggaatgtggactggagtcttcccgaggaggaagctatcttggatgaattggtctaccattacttcgagagtggtgaactcagtaaattgcttggggatgaagagataaacagaaggcaatttgaaagg

Protein Analysis

437

Amino Acids

49.94

Weight (kDa)

5.7

Isoelectric Point (pI)

50.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 498, 636
AccI GTMKAC 1 cut(s) 1236
AccII CGCG 1 cut(s) 553
AciI CCGC 2 cut(s) 237, 551
AclWI GGATC 2 cut(s) 60, 838
AcsI RAATTY 1 cut(s) 713
AcuI CTGAAG 3 cut(s) 45, 720, 1022
AfaI GTAC 3 cut(s) 765, 818, 995
AfiI CCNNNNNNNGG 1 cut(s) 376
AflIII ACRYGT 1 cut(s) 996
AgsI TTSAA 5 cut(s) 283, 312, 530, 598, 1307
AjiI CACGTC 1 cut(s) 544
AjnI CCWGG 1 cut(s) 173
AlwI GGATC 2 cut(s) 60, 838
Ama87I CYCGRG 3 cut(s) 46, 1097, 1205
AoxI GGCC 2 cut(s) 207, 790
ApeKI GCWGC 2 cut(s) 258, 695
ApoI RAATTY 1 cut(s) 713
AspLEI GCGC 1 cut(s) 1096
AspS9I GGNCC 2 cut(s) 441, 791
AsuC2I CCSGG 3 cut(s) 27, 47, 48
AsuHPI GGTGA 6 cut(s) 34, 466, 533, 655, 743, 1268
AvaI CYCGRG 3 cut(s) 46, 1097, 1205
AvaII GGWCC 1 cut(s) 441
BaeGI GKGCMC 1 cut(s) 1004
BarI GAAGNNNNNNTAC 2 cut(s) 604, 636
BauI CACGAG 1 cut(s) 909
BbsI GAAGAC 1 cut(s) 1193
BbvI GCAGC 2 cut(s) 245, 707
BccI CCATC 4 cut(s) 144, 245, 782, 979
BciT130I CCWGG 1 cut(s) 175
BcnI CCSGG 3 cut(s) 27, 47, 48
BfaI CTAG 4 cut(s) 575, 665, 683, 1053
BfmI CTRYAG 2 cut(s) 259, 354
BglI GCCNNNNNGGC 2 cut(s) 789, 1102
BisI GCNGC 3 cut(s) 237, 259, 696
BlsI GCNGC 3 cut(s) 238, 260, 697
Bme1390I CCNGG 4 cut(s) 27, 47, 48, 175
Bme18I GGWCC 1 cut(s) 441
BmeT110I CYCGRG 3 cut(s) 46, 1097, 1205
BmgBI CACGTC 1 cut(s) 544
BmgT120I GGNCC 2 cut(s) 441, 791
BmiI GGNNCC 2 cut(s) 442, 549
BmrFI CCNGG 4 cut(s) 27, 47, 48, 175
BoxI GACNNNNGTC 1 cut(s) 1197
BpiI GAAGAC 1 cut(s) 1193
BpmI CTGGAG 2 cut(s) 333, 1216
BpuMI CCSGG 3 cut(s) 27, 47, 48
BsaJI CCNNGG 4 cut(s) 45, 46, 47, 1206
BsaWI WCCGGW 1 cut(s) 1064
BsaXI ACNNNNNCTCC 2 cut(s) 1157, 1187
Bsc4I CCNNNNNNNGG 1 cut(s) 376
Bse1I ACTGG 1 cut(s) 1199
Bse3DI GCAATG 1 cut(s) 832
BseBI CCWGG 1 cut(s) 175
BseDI CCNNGG 4 cut(s) 45, 46, 47, 1206
BseGI GGATG 5 cut(s) 510, 951, 994, 1231, 1285
BseLI CCNNNNNNNGG 1 cut(s) 376
BseMI GCAATG 1 cut(s) 832
BseMII CTCAG 4 cut(s) 330, 714, 849, 1276
BseNI ACTGG 1 cut(s) 1199
BseRI GAGGAG 3 cut(s) 617, 630, 1223
BseSI GKGCMC 1 cut(s) 1004
BseXI GCAGC 2 cut(s) 245, 707
BseYI CCCAGC 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 553
BshFI GGCC 2 cut(s) 209, 792
BsiHKCI CYCGRG 3 cut(s) 46, 1097, 1205
BsiSI CCGG 3 cut(s) 26, 47, 1065
BslFI GGGAC 1 cut(s) 1090
BslI CCNNNNNNNGG 1 cut(s) 376
BsmFI GGGAC 1 cut(s) 1090
BsmI GAATGC 2 cut(s) 17, 203
BsnI GGCC 2 cut(s) 209, 792
BsoBI CYCGRG 3 cut(s) 46, 1097, 1205
Bsp1286I GDGCHC 1 cut(s) 1004
Bsp143I GATC 4 cut(s) 52, 456, 830, 948
BspACI CCGC 2 cut(s) 237, 551
BspANI GGCC 2 cut(s) 209, 792
BspCNI CTCAG 4 cut(s) 329, 715, 850, 1275
BspFNI CGCG 1 cut(s) 553
BspLI GGNNCC 2 cut(s) 442, 549
BspMAI CTGCAG 1 cut(s) 263
BspPI GGATC 2 cut(s) 60, 838
BsrDI GCAATG 1 cut(s) 832
BsrI ACTGG 1 cut(s) 1199
BssECI CCNNGG 4 cut(s) 45, 46, 47, 1206
BssMI GATC 4 cut(s) 52, 456, 830, 948
BssSI CACGAG 1 cut(s) 909
Bst2BI CACGAG 1 cut(s) 909
Bst2UI CCWGG 1 cut(s) 175
Bst4CI ACNGT 6 cut(s) 230, 433, 631, 755, 959, 1126
Bst6I CTCTTC 3 cut(s) 854, 927, 1278
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 4 cut(s) 316, 723, 858, 1262
BstF5I GGATG 5 cut(s) 510, 951, 994, 1231, 1285
BstFNI CGCG 1 cut(s) 553
BstHHI GCGC 1 cut(s) 1096
BstKTI GATC 4 cut(s) 55, 459, 833, 951
BstMBI GATC 4 cut(s) 52, 456, 830, 948
BstMWI GCNNNNNNNGC 4 cut(s) 245, 704, 789, 1102
BstNI CCWGG 1 cut(s) 175
BstNSI RCATGY 1 cut(s) 1000
BstPAI GACNNNNGTC 1 cut(s) 1197
BstSCI CCNGG 4 cut(s) 25, 45, 46, 173
BstSFI CTRYAG 2 cut(s) 259, 354
BstSLI GKGCMC 1 cut(s) 1004
BstUI CGCG 1 cut(s) 553
BstV1I GCAGC 2 cut(s) 245, 707
BstV2I GAAGAC 1 cut(s) 1193
BstXI CCANNNNNNTGG 1 cut(s) 451
BsuRI GGCC 2 cut(s) 209, 792
BtrI CACGTC 1 cut(s) 544
BtsCI GGATG 5 cut(s) 510, 951, 994, 1231, 1285
BtsIMutI CAGTG 1 cut(s) 955
Cac8I GCNNGC 1 cut(s) 211
CfoI GCGC 1 cut(s) 1096
Cfr13I GGNCC 2 cut(s) 441, 791
Cfr9I CCCGGG 1 cut(s) 46
CsiI ACCWGGT 1 cut(s) 173
Csp6I GTAC 3 cut(s) 764, 817, 994
CviAII CATG 5 cut(s) 127, 169, 820, 929, 997
CviQI GTAC 3 cut(s) 764, 817, 994
DdeI CTNAG 4 cut(s) 316, 723, 858, 1262
DpnI GATC 4 cut(s) 54, 458, 832, 950
DpnII GATC 4 cut(s) 52, 456, 830, 948
Eam1104I CTCTTC 3 cut(s) 854, 927, 1278
EarI CTCTTC 3 cut(s) 854, 927, 1278
Eco147I AGGCCT 1 cut(s) 209
Eco47I GGWCC 1 cut(s) 441
Eco57I CTGAAG 3 cut(s) 45, 720, 1022
Eco88I CYCGRG 3 cut(s) 46, 1097, 1205
EcoRI GAATTC 1 cut(s) 713
EcoRII CCWGG 1 cut(s) 173
FaeI CATG 5 cut(s) 130, 172, 823, 932, 1000
FalI AAGNNNNNCTT 4 cut(s) 197, 229, 225, 257
FaqI GGGAC 1 cut(s) 1090
FatI CATG 5 cut(s) 126, 168, 819, 928, 996
FauNDI CATATG 1 cut(s) 559
FblI GTMKAC 1 cut(s) 1236
Fnu4HI GCNGC 3 cut(s) 237, 259, 696
FokI GGATG 5 cut(s) 517, 938, 1001, 1238, 1292
Fsp4HI GCNGC 3 cut(s) 237, 259, 696
FspBI CTAG 4 cut(s) 575, 665, 683, 1053
GlaI GCGC 1 cut(s) 1095
GluI GCNGC 3 cut(s) 237, 259, 696
GsaI CCCAGC 1 cut(s) 144
GsuI CTGGAG 2 cut(s) 333, 1216
HaeIII GGCC 2 cut(s) 209, 792
HapII CCGG 3 cut(s) 26, 47, 1065
HhaI GCGC 1 cut(s) 1096
Hin1II CATG 5 cut(s) 130, 172, 823, 932, 1000
Hin6I GCGC 1 cut(s) 1094
HinP1I GCGC 1 cut(s) 1094
HindIII AAGCTT 1 cut(s) 800
HinfI GANTC 5 cut(s) 30, 35, 98, 283, 1198
HpaII CCGG 3 cut(s) 26, 47, 1065
HphI GGTGA 6 cut(s) 34, 466, 533, 655, 743, 1268
Hpy166II GTNNAC 4 cut(s) 344, 1192, 1237, 1259
Hpy188I TCNGA 3 cut(s) 103, 187, 1015
Hpy188III TCNNGA 3 cut(s) 718, 1205, 1249
Hpy8I GTNNAC 4 cut(s) 344, 1192, 1237, 1259
HpyAV CCTTC 4 cut(s) 32, 386, 1176, 1290
HpyCH4III ACNGT 6 cut(s) 230, 433, 631, 755, 959, 1126
HpyCH4IV ACGT 2 cut(s) 543, 766
HpyF10VI GCNNNNNNNGC 4 cut(s) 245, 704, 789, 1102
HpyF3I CTNAG 4 cut(s) 316, 723, 858, 1262
HpySE526I ACGT 2 cut(s) 543, 766
Hsp92II CATG 5 cut(s) 130, 172, 823, 932, 1000
HspAI GCGC 1 cut(s) 1094
Kzo9I GATC 4 cut(s) 52, 456, 830, 948
LmnI GCTCC 2 cut(s) 553, 617
Lsp1109I GCAGC 2 cut(s) 245, 707
MabI ACCWGGT 1 cut(s) 173
MaeI CTAG 4 cut(s) 575, 665, 683, 1053
MaeII ACGT 2 cut(s) 543, 766
MaeIII GTNAC 1 cut(s) 959
MalI GATC 4 cut(s) 54, 458, 832, 950
MboI GATC 4 cut(s) 52, 456, 830, 948
MhlI GDGCHC 1 cut(s) 1004
MluCI AATT 8 cut(s) 465, 592, 713, 1068, 1152, 1229, 1268, 1301
MlyI GAGTC 3 cut(s) 44, 107, 1207
MmeI TCCRAC 1 cut(s) 1143
MseI TTAA 1 cut(s) 1128
MslI CAYNNNNRTG 1 cut(s) 983
MspA1I CMGCKG 1 cut(s) 698
MspI CCGG 3 cut(s) 26, 47, 1065
MspR9I CCNGG 4 cut(s) 27, 47, 48, 175
Mva1269I GAATGC 2 cut(s) 17, 203
MvaI CCWGG 1 cut(s) 175
MvnI CGCG 1 cut(s) 553
MwoI GCNNNNNNNGC 4 cut(s) 245, 704, 789, 1102
NciI CCSGG 3 cut(s) 27, 47, 48
NdeI CATATG 1 cut(s) 559
NdeII GATC 4 cut(s) 52, 456, 830, 948
NlaIII CATG 5 cut(s) 130, 172, 823, 932, 1000
NlaIV GGNNCC 2 cut(s) 442, 549
NmuCI GTSAC 1 cut(s) 959
NspI RCATGY 1 cut(s) 1000
PceI AGGCCT 1 cut(s) 209
PciI ACATGT 1 cut(s) 996
PctI GAATGC 2 cut(s) 17, 203
PfeI GAWTC 2 cut(s) 30, 283
PflFI GACNNNGTC 1 cut(s) 175
PfoI TCCNGGA 1 cut(s) 25
PkrI GCNGC 3 cut(s) 238, 260, 697
PleI GAGTC 3 cut(s) 43, 106, 1206
PpsI GAGTC 3 cut(s) 43, 106, 1206
PscI ACATGT 1 cut(s) 996
PshAI GACNNNNGTC 1 cut(s) 1197
PsiI TTATAA 2 cut(s) 498, 636
Psp6I CCWGG 1 cut(s) 173
PspFI CCCAGC 1 cut(s) 140
PspGI CCWGG 1 cut(s) 173
PspN4I GGNNCC 2 cut(s) 442, 549
PspPI GGNCC 2 cut(s) 441, 791
PstI CTGCAG 1 cut(s) 263
PsyI GACNNNGTC 1 cut(s) 175
PvuII CAGCTG 1 cut(s) 698
RsaI GTAC 3 cut(s) 765, 818, 995
RsaNI GTAC 3 cut(s) 764, 817, 994
RseI CAYNNNNRTG 1 cut(s) 983
SaqAI TTAA 1 cut(s) 1128
SatI GCNGC 3 cut(s) 237, 259, 696
Sau3AI GATC 4 cut(s) 52, 456, 830, 948
Sau96I GGNCC 2 cut(s) 441, 791
SchI GAGTC 3 cut(s) 44, 107, 1207
ScrFI CCNGG 4 cut(s) 27, 47, 48, 175
SduI GDGCHC 1 cut(s) 1004
SexAI ACCWGGT 1 cut(s) 173
SfcI CTRYAG 2 cut(s) 259, 354
SinI GGWCC 1 cut(s) 441
SmaI CCCGGG 1 cut(s) 48
SmiMI CAYNNNNRTG 1 cut(s) 983
Sse9I AATT 8 cut(s) 465, 592, 713, 1068, 1152, 1229, 1268, 1301
SseBI AGGCCT 1 cut(s) 209
SsiI CCGC 2 cut(s) 237, 551
SspI AATATT 1 cut(s) 364
SspMI CTAG 4 cut(s) 575, 665, 683, 1053
StuI AGGCCT 1 cut(s) 209
StyD4I CCNGG 4 cut(s) 25, 45, 46, 173
TaaI ACNGT 6 cut(s) 230, 433, 631, 755, 959, 1126
TaiI ACGT 2 cut(s) 546, 769
TaqI TCGA 5 cut(s) 33, 397, 898, 1180, 1248
TasI AATT 8 cut(s) 465, 592, 713, 1068, 1152, 1229, 1268, 1301
TatI WGTACW 2 cut(s) 816, 993
TauI GCSGC 1 cut(s) 239
TfiI GAWTC 2 cut(s) 30, 283
Tru1I TTAA 1 cut(s) 1128
Tru9I TTAA 1 cut(s) 1128
TscAI CASTG 1 cut(s) 962
TseFI GTSAC 1 cut(s) 959
TseI GCWGC 2 cut(s) 258, 695
Tsp45I GTSAC 1 cut(s) 959
TspDTI ATGAA 9 cut(s) 123, 313, 414, 521, 582, 743, 945, 1242, 1296
TspMI CCCGGG 1 cut(s) 46
TspRI CASTG 1 cut(s) 962
Tth111I GACNNNGTC 1 cut(s) 175
VpaK11BI GGWCC 1 cut(s) 441
XapI RAATTY 1 cut(s) 713
XceI RCATGY 1 cut(s) 1000
XmaI CCCGGG 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 1236
XspI CTAG 4 cut(s) 575, 665, 683, 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.