Rorug02G0217600

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
20969436 .. 20970477
1042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0217600.1

Sequence Viewer

Length: 660 bp
ATGGCAGCAGAGGTGGTGCTGCAGGTGGCCCTTCTGATCCTAACCCTTGCCATATTCTTCGCCATACACAAACTCTCCAAACAAGCCTTAACCAAGCTGCGAACCAACAACCGAGCCACTCTCCAAGCCACCCGACACTTCGTCCTCGGATCCCAGCTCCTGACCCGAGCCCGATCCACTCCCCACAAGACCCAGTCCCACTCCCACGCCAAATCCGCTTTAACCGAGGCCGAGAAGGCCCTCTCTCTCTCGCCCCGAGACCCGGGCCCGCACATCCTCAAAGCCCTAGCTCTGGATCTCTTGGGCCACCGGAACTCCGCCCTGCGATCGCTCGACGCCGCCTTGTCGCCGCCGTGCGTTAAGTCACTCGCGGATAGGGAGCGTGGGGAGGCGTTGGTGAAGAGGGCGGAGCTGAAGCTCGCGCTGAACCGGCGGCGCCGGGTCGACTCGGCGGTCGAGGACCTGGTTGAAGCGGTTGGGCTGAGTTCGGGTGAGGGTAGTACGACGGCGTTTTGTTTGTTGGGTCAGTGTTACGAGCGGAAGGGGATGAGGGACGAAGCTAGGGAGGCCTTCGAGCGGGCCTTGACGATGGATTCTGGGTCGGTATTGGCCCGTCAAGGCTTGGACCGGTTGCGGCTTAATCAAAGTCCAAGCCCATGA

Protein Analysis

219

Amino Acids

23.89

Weight (kDa)

10.13

Isoelectric Point (pI)

49.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_2 PF07719 170 - 198 7e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
AasI GACNNNNNNGTC 1 cut(s) 452
Acc36I ACCTGC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 435
AccBSI CCGCTC 2 cut(s) 538, 577
AccI GTMKAC 1 cut(s) 444
AccII CGCG 2 cut(s) 371, 422
AclWI GGATC 5 cut(s) 31, 144, 157, 168, 303
AcuI CTGAAG 1 cut(s) 434
AcyI GRCGYC 2 cut(s) 336, 436
AfaI GTAC 1 cut(s) 502
AfiI CCNNNNNNNGG 3 cut(s) 262, 292, 576
AgeI ACCGGT 1 cut(s) 627
AgsI TTSAA 1 cut(s) 470
AhdI GACNNNNNGTC 1 cut(s) 140
AjnI CCWGG 1 cut(s) 462
AluBI AGCT 6 cut(s) 97, 157, 290, 412, 418, 560
AluI AGCT 6 cut(s) 97, 157, 290, 412, 418, 560
Alw26I GTCTC 1 cut(s) 252
AlwI GGATC 5 cut(s) 31, 144, 157, 168, 303
AlwNI CAGNNNCTG 1 cut(s) 160
Ama87I CYCGRG 3 cut(s) 165, 255, 262
AoxI GGCC 8 cut(s) 27, 228, 237, 265, 304, 567, 579, 609
ApaI GGGCCC 1 cut(s) 269
ApeKI GCWGC 3 cut(s) 5, 19, 97
AsiGI ACCGGT 1 cut(s) 627
AsiSI GCGATCGC 1 cut(s) 329
AspLEI GCGC 2 cut(s) 424, 438
AspS9I GGNCC 9 cut(s) 28, 238, 265, 266, 304, 460, 579, 610, 625
AsuC2I CCSGG 3 cut(s) 263, 264, 440
AsuHPI GGTGA 2 cut(s) 409, 503
AvaI CYCGRG 3 cut(s) 165, 255, 262
AvaII GGWCC 2 cut(s) 460, 625
BaeGI GKGCMC 1 cut(s) 269
BamHI GGATCC 1 cut(s) 149
BanI GGYRCC 1 cut(s) 435
BanII GRGCYC 2 cut(s) 172, 269
BbvI GCAGC 3 cut(s) 6, 17, 84
BccI CCATC 1 cut(s) 583
BceAI ACGGC 2 cut(s) 337, 522
BciT130I CCWGG 1 cut(s) 464
BcnI CCSGG 3 cut(s) 263, 264, 440
BcoDI GTCTC 1 cut(s) 252
BfaI CTAG 2 cut(s) 287, 561
BfmI CTRYAG 1 cut(s) 20
BfoI RGCGCY 1 cut(s) 439
BfuAI ACCTGC 1 cut(s) 13
BglI GCCNNNNNGGC 1 cut(s) 236
BisI GCNGC 7 cut(s) 6, 20, 98, 339, 350, 434, 635
BlsI GCNGC 7 cut(s) 7, 21, 99, 340, 351, 435, 636
Bme1390I CCNGG 4 cut(s) 263, 264, 440, 464
Bme18I GGWCC 2 cut(s) 460, 625
BmeRI GACNNNNNGTC 1 cut(s) 140
BmeT110I CYCGRG 3 cut(s) 165, 255, 262
BmgT120I GGNCC 9 cut(s) 28, 238, 265, 266, 304, 460, 579, 610, 625
BmiI GGNNCC 3 cut(s) 151, 267, 437
BmrFI CCNGG 4 cut(s) 263, 264, 440, 464
BmrI ACTGGG 1 cut(s) 187
BmuI ACTGGG 1 cut(s) 187
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpuMI CCSGG 3 cut(s) 263, 264, 440
BsaHI GRCGYC 2 cut(s) 336, 436
BsaI GGTCTC 1 cut(s) 252
BsaJI CCNNGG 3 cut(s) 145, 225, 262
BsaWI WCCGGW 2 cut(s) 309, 627
BsaXI ACNNNNNCTCC 4 cut(s) 59, 89, 299, 329
Bsc4I CCNNNNNNNGG 3 cut(s) 262, 292, 576
Bse118I RCCGGY 2 cut(s) 429, 627
Bse1I ACTGG 1 cut(s) 193
BseBI CCWGG 1 cut(s) 464
BseDI CCNNGG 3 cut(s) 145, 225, 262
BseGI GGATG 2 cut(s) 273, 552
BseLI CCNNNNNNNGG 3 cut(s) 262, 292, 576
BseMII CTCAG 1 cut(s) 473
BseNI ACTGG 1 cut(s) 193
BseSI GKGCMC 1 cut(s) 269
BseXI GCAGC 3 cut(s) 6, 17, 84
BseYI CCCAGC 1 cut(s) 153
Bsh1236I CGCG 2 cut(s) 371, 422
Bsh1285I CGRYCG 2 cut(s) 329, 456
BshFI GGCC 8 cut(s) 29, 230, 239, 267, 306, 569, 581, 611
BshNI GGYRCC 1 cut(s) 435
BshTI ACCGGT 1 cut(s) 627
BsiEI CGRYCG 2 cut(s) 329, 456
BsiHKCI CYCGRG 3 cut(s) 165, 255, 262
BsiSI CCGG 5 cut(s) 263, 310, 430, 439, 628
BslFI GGGAC 2 cut(s) 181, 566
BslI CCNNNNNNNGG 3 cut(s) 262, 292, 576
BsmAI GTCTC 1 cut(s) 252
BsmFI GGGAC 2 cut(s) 181, 566
BsnI GGCC 8 cut(s) 29, 230, 239, 267, 306, 569, 581, 611
Bso31I GGTCTC 1 cut(s) 252
BsoBI CYCGRG 3 cut(s) 165, 255, 262
Bsp120I GGGCCC 1 cut(s) 265
Bsp1286I GDGCHC 2 cut(s) 172, 269
Bsp143I GATC 5 cut(s) 36, 149, 173, 295, 326
BspANI GGCC 8 cut(s) 29, 230, 239, 267, 306, 569, 581, 611
BspCNI CTCAG 1 cut(s) 474
BspFNI CGCG 2 cut(s) 371, 422
BspLI GGNNCC 3 cut(s) 151, 267, 437
BspMAI CTGCAG 1 cut(s) 24
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 5 cut(s) 31, 144, 157, 168, 303
BspT107I GGYRCC 1 cut(s) 435
BspTNI GGTCTC 1 cut(s) 252
BsrBI CCGCTC 2 cut(s) 538, 577
BsrFI RCCGGY 2 cut(s) 429, 627
BsrI ACTGG 1 cut(s) 193
BssAI RCCGGY 2 cut(s) 429, 627
BssECI CCNNGG 3 cut(s) 145, 225, 262
BssMI GATC 5 cut(s) 36, 149, 173, 295, 326
BssNI GRCGYC 2 cut(s) 336, 436
Bst2UI CCWGG 1 cut(s) 464
Bst6I CTCTTC 1 cut(s) 395
BstACI GRCGYC 2 cut(s) 336, 436
BstC8I GCNNGC 3 cut(s) 269, 420, 579
BstDEI CTNAG 1 cut(s) 482
BstF5I GGATG 2 cut(s) 273, 552
BstFNI CGCG 2 cut(s) 371, 422
BstH2I RGCGCY 1 cut(s) 439
BstHHI GCGC 2 cut(s) 424, 438
BstKTI GATC 5 cut(s) 39, 152, 176, 298, 329
BstMAI GTCTC 1 cut(s) 252
BstMBI GATC 5 cut(s) 36, 149, 173, 295, 326
BstMCI CGRYCG 2 cut(s) 329, 456
BstMWI GCNNNNNNNGC 4 cut(s) 215, 236, 430, 566
BstNI CCWGG 1 cut(s) 464
BstSCI CCNGG 4 cut(s) 261, 262, 438, 462
BstSFI CTRYAG 1 cut(s) 20
BstSLI GKGCMC 1 cut(s) 269
BstUI CGCG 2 cut(s) 371, 422
BstV1I GCAGC 3 cut(s) 6, 17, 84
BstX2I RGATCY 2 cut(s) 149, 295
BstYI RGATCY 2 cut(s) 149, 295
BsuRI GGCC 8 cut(s) 29, 230, 239, 267, 306, 569, 581, 611
BtsCI GGATG 2 cut(s) 273, 552
BtsIMutI CAGTG 1 cut(s) 533
BveI ACCTGC 1 cut(s) 13
Cac8I GCNNGC 3 cut(s) 269, 420, 579
CaiI CAGNNNCTG 1 cut(s) 160
CfoI GCGC 2 cut(s) 424, 438
Cfr10I RCCGGY 2 cut(s) 429, 627
Cfr13I GGNCC 9 cut(s) 28, 238, 265, 266, 304, 460, 579, 610, 625
Cfr9I CCCGGG 1 cut(s) 262
CseI GACGC 1 cut(s) 344
CsiI ACCWGGT 1 cut(s) 462
Csp6I GTAC 1 cut(s) 501
CspAI ACCGGT 1 cut(s) 627
CviAII CATG 1 cut(s) 657
CviQI GTAC 1 cut(s) 501
DdeI CTNAG 1 cut(s) 482
DinI GGCGCC 1 cut(s) 437
DpnI GATC 5 cut(s) 38, 151, 175, 297, 328
DpnII GATC 5 cut(s) 36, 149, 173, 295, 326
DrdI GACNNNNNNGTC 1 cut(s) 452
DriI GACNNNNNGTC 1 cut(s) 140
DseDI GACNNNNNNGTC 1 cut(s) 452
Eam1104I CTCTTC 1 cut(s) 395
Eam1105I GACNNNNNGTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 395
EciI GGCGGA 2 cut(s) 307, 422
Eco147I AGGCCT 1 cut(s) 569
Eco24I GRGCYC 2 cut(s) 172, 269
Eco31I GGTCTC 1 cut(s) 252
Eco47I GGWCC 2 cut(s) 460, 625
Eco57I CTGAAG 1 cut(s) 434
Eco88I CYCGRG 3 cut(s) 165, 255, 262
EcoO109I RGGNCCY 2 cut(s) 238, 460
EcoRII CCWGG 1 cut(s) 462
EcoT38I GRGCYC 2 cut(s) 172, 269
EgeI GGCGCC 1 cut(s) 437
EheI GGCGCC 1 cut(s) 437
FaeI CATG 1 cut(s) 660
FaiI YATR 3 cut(s) 53, 65, 658
FaqI GGGAC 2 cut(s) 181, 566
FatI CATG 1 cut(s) 656
FauI CCCGC 2 cut(s) 276, 570
FblI GTMKAC 1 cut(s) 444
Fnu4HI GCNGC 7 cut(s) 6, 20, 98, 339, 350, 434, 635
FokI GGATG 2 cut(s) 260, 559
FriOI GRGCYC 2 cut(s) 172, 269
Fsp4HI GCNGC 7 cut(s) 6, 20, 98, 339, 350, 434, 635
FspBI CTAG 2 cut(s) 287, 561
GlaI GCGC 2 cut(s) 423, 437
GluI GCNGC 7 cut(s) 6, 20, 98, 339, 350, 434, 635
GsaI CCCAGC 1 cut(s) 157
HaeII RGCGCY 1 cut(s) 439
HaeIII GGCC 8 cut(s) 29, 230, 239, 267, 306, 569, 581, 611
HapII CCGG 5 cut(s) 263, 310, 430, 439, 628
HgaI GACGC 1 cut(s) 344
HhaI GCGC 2 cut(s) 424, 438
Hin1I GRCGYC 2 cut(s) 336, 436
Hin1II CATG 1 cut(s) 660
Hin6I GCGC 2 cut(s) 422, 436
HinP1I GCGC 2 cut(s) 422, 436
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HinfI GANTC 2 cut(s) 446, 593
HpaII CCGG 5 cut(s) 263, 310, 430, 439, 628
HphI GGTGA 2 cut(s) 409, 503
Hpy166II GTNNAC 1 cut(s) 445
Hpy188I TCNGA 2 cut(s) 36, 149
Hpy188III TCNNGA 2 cut(s) 160, 293
Hpy8I GTNNAC 1 cut(s) 445
Hpy99I CGWCG 2 cut(s) 338, 508
HpyAV CCTTC 4 cut(s) 41, 229, 535, 580
HpyCH4V TGCA 1 cut(s) 22
HpyF10VI GCNNNNNNNGC 4 cut(s) 215, 236, 430, 566
HpyF3I CTNAG 1 cut(s) 482
Hsp92I GRCGYC 2 cut(s) 336, 436
Hsp92II CATG 1 cut(s) 660
HspAI GCGC 2 cut(s) 422, 436
KasI GGCGCC 1 cut(s) 435
Kzo9I GATC 5 cut(s) 36, 149, 173, 295, 326
LmnI GCTCC 3 cut(s) 162, 379, 409
Lsp1109I GCAGC 3 cut(s) 6, 17, 84
MabI ACCWGGT 1 cut(s) 462
MaeI CTAG 2 cut(s) 287, 561
MaeIII GTNAC 2 cut(s) 363, 530
MalI GATC 5 cut(s) 38, 151, 175, 297, 328
MbiI CCGCTC 2 cut(s) 538, 577
MboI GATC 5 cut(s) 36, 149, 173, 295, 326
MboII GAAGA 2 cut(s) 49, 412
MflI RGATCY 2 cut(s) 149, 295
MhlI GDGCHC 2 cut(s) 172, 269
Mly113I GGCGCC 1 cut(s) 436
MlyI GAGTC 1 cut(s) 440
MseI TTAA 4 cut(s) 89, 221, 360, 639
MspI CCGG 5 cut(s) 263, 310, 430, 439, 628
MspR9I CCNGG 4 cut(s) 263, 264, 440, 464
MvaI CCWGG 1 cut(s) 464
MvnI CGCG 2 cut(s) 371, 422
MwoI GCNNNNNNNGC 4 cut(s) 215, 236, 430, 566
NarI GGCGCC 1 cut(s) 436
NciI CCSGG 3 cut(s) 263, 264, 440
NdeII GATC 5 cut(s) 36, 149, 173, 295, 326
NlaIII CATG 1 cut(s) 660
NlaIV GGNNCC 3 cut(s) 151, 267, 437
NmeAIII GCCGAG 2 cut(s) 256, 428
NmuCI GTSAC 1 cut(s) 363
PaqCI CACCTGC 1 cut(s) 13
PceI AGGCCT 1 cut(s) 569
PfeI GAWTC 1 cut(s) 593
PflFI GACNNNGTC 1 cut(s) 193
PinAI ACCGGT 1 cut(s) 627
PkrI GCNGC 7 cut(s) 7, 21, 99, 340, 351, 435, 636
Ple19I CGATCG 1 cut(s) 329
PleI GAGTC 1 cut(s) 440
PluTI GGCGCC 1 cut(s) 439
PpsI GAGTC 1 cut(s) 440
PpuMI RGGWCCY 1 cut(s) 460
Psp5II RGGWCCY 1 cut(s) 460
Psp6I CCWGG 1 cut(s) 462
PspFI CCCAGC 1 cut(s) 153
PspGI CCWGG 1 cut(s) 462
PspN4I GGNNCC 3 cut(s) 151, 267, 437
PspOMI GGGCCC 1 cut(s) 265
PspPI GGNCC 9 cut(s) 28, 238, 265, 266, 304, 460, 579, 610, 625
PspPPI RGGWCCY 1 cut(s) 460
PstI CTGCAG 1 cut(s) 24
PstNI CAGNNNCTG 1 cut(s) 160
PsuI RGATCY 2 cut(s) 149, 295
PsyI GACNNNGTC 1 cut(s) 193
PvuI CGATCG 1 cut(s) 329
RgaI GCGATCGC 1 cut(s) 329
RsaI GTAC 1 cut(s) 502
RsaNI GTAC 1 cut(s) 501
SalI GTCGAC 1 cut(s) 443
SaqAI TTAA 4 cut(s) 89, 221, 360, 639
SatI GCNGC 7 cut(s) 6, 20, 98, 339, 350, 434, 635
Sau3AI GATC 5 cut(s) 36, 149, 173, 295, 326
Sau96I GGNCC 9 cut(s) 28, 238, 265, 266, 304, 460, 579, 610, 625
SchI GAGTC 1 cut(s) 440
ScrFI CCNGG 4 cut(s) 263, 264, 440, 464
SduI GDGCHC 2 cut(s) 172, 269
SetI ASST 9 cut(s) 15, 27, 99, 159, 292, 414, 420, 465, 562
SexAI ACCWGGT 1 cut(s) 462
SfaAI GCGATCGC 1 cut(s) 329
SfcI CTRYAG 1 cut(s) 20
SfiI GGCCNNNNNGGCC 1 cut(s) 236
SfoI GGCGCC 1 cut(s) 437
SgfI GCGATCGC 1 cut(s) 329
SinI GGWCC 2 cut(s) 460, 625
SmaI CCCGGG 1 cut(s) 264
SseBI AGGCCT 1 cut(s) 569
SspDI GGCGCC 1 cut(s) 435
SspMI CTAG 2 cut(s) 287, 561
StuI AGGCCT 1 cut(s) 569
StyD4I CCNGG 4 cut(s) 261, 262, 438, 462
TaqI TCGA 4 cut(s) 333, 444, 456, 573
TauI GCSGC 4 cut(s) 341, 352, 436, 637
TfiI GAWTC 1 cut(s) 593
Tru1I TTAA 4 cut(s) 89, 221, 360, 639
Tru9I TTAA 4 cut(s) 89, 221, 360, 639
TscAI CASTG 1 cut(s) 533
TseFI GTSAC 1 cut(s) 363
TseI GCWGC 3 cut(s) 5, 19, 97
Tsp45I GTSAC 1 cut(s) 363
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 1 cut(s) 533
Tth111I GACNNNGTC 1 cut(s) 193
VpaK11BI GGWCC 2 cut(s) 460, 625
XmaI CCCGGG 1 cut(s) 262
XmiI GTMKAC 1 cut(s) 444
XspI CTAG 2 cut(s) 287, 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.