RchiOBHm_Chr2g0118321

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
30629145 .. 30631480
2336 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49114

Sequence Viewer

Length: 2151 bp
ATGGCTTTTATAGTTTGTTATCTTCTTGCCTTTGCGTTCTTCAATTATGCTGAAGCACAACAACTGCAGTCTAATATAAGCAGGGGCTCTGCTTTAACACCCACCACCAACTCCTCATGGTTGTCCAGTTCCGGTATGTATGCCTTTGGCTTTTACAAGCAAGGCAATGGCTTTGCTATGGGGATAGTTGTTGCTGGAGTCCCCGAAAAGACTGTGGTGTGGACTGCAGATAGAGATGGTGGACTAGTCTCAAACAATGCCACCTTGTTCTTCACAAGTGATGGGATTGCCTTGCAGTTGACACAAGGCCGAAGTTTGGTGGTTGAGTCTCCAATGCCTATTTCTTCTGCTTCGATGCTTGATTCGGCTAATTTTGTGCTGTACAATGCGAGTCGGGCAATAGTATGGCAAAGCTTCTTGTACCCAACTGATACCTTGTTGCCCACTCAACCACTGCTAGCAGGGAAGAAACTTGTGTCTGCTAAATCAGAAACTGATCACTCATCAGGTGTTGATGGCCGTCTCTACTTGCTCAATGATACTGGTGGAAATTTAATGTATCTCACCGATGGAGGTCTTCCCACTAGAGGAAATTCTTATCTTATGAGAATTGATGCGGATGGGATTTTTCGTCTGTATTCGCATGATCTTGAACAGAAAGGAAATTGGTCCCCTGAATGGTCATCTTCAACGGATAGATGTGTCCCTAAAGGTATTTGCGGATTTAATAGTTACTGTGTAACAATGGGCTGTAGATGTCTTCCTGGATTCGAATCTGTCAACCCGAGAAATCAGACTTCAGGTTGTGAGAGAAATTCTTCCATTGGAGATGCTTGCAGATCGAAGAATTGGAATTGCAACTACACCATGCAAGAACTGGGCGGCACAGCATGGGAGGATGCGCCATATATGGTTCTGTCATCTTTAGGTACAGAAGATTGCAAACAGGCCTGTTTGGAGGATTTGAACTGTCAGGCTGCCGTTCTTCAAGGTGCAAGCTGTAAAAAACAGAGGCTTCCTTTGAGATATGGAAGAAGAGATGAGGGTACTTCGAACGTAGTTTTCCCCAAGGAGGTTGTCATGTCTCCTGCAGCTCCAGCTCTAGACGCAGTTGTTCCAAAAGGAAGCAGGAAAAATGGTAGAATTGTATTCTTGATTATTGGCGTGTCATTTACTGCTTTGGGGTCCATTTTGTTGGTGATTTATGTCATTGTATTATGGAAACACAATGTCTGGGCATATAAAAGAATGAATGAGTTCAATGGTGATGCTGAGTGGAATGAGGATGTAGCTCCGAGACCATATGCTTATGAAGAGCTAGAAAAGATGACTAATAATTTCAATGAAGAGGTTGGTACAGGAGCCTCAGGAACTGTTTACAAAGGGGTGATTGGAAATAGCCAAAAGCTAGTTGCTGTCAAGAGACTTGAGAAATTTGCAGCTGAAGGTGACAAAGAATTTCATACTGAAATGAGAATTATTGGCAGAACCCATTATCGGAATTTAGTCCGTTTACTTGGGTACTGTCTTGATGGACCAAAGAAGCTTTTGGTGTATGAGTACATGAGCAATGGTTCACTTGTAGATATACTCTTCACACCTGAGAGGAAACCTTACTGGGAAGAAAGAATGGGAATTGCATGCAACATAGCACGAGGGTTTCTTTATCTCCATGAGGAGTGTGATACACAGATCATTCACTGTGACATAAAACCTCAAAACATACTGATGGATGAGTACATGTGCCCAAAAATCTCTGACTTCAGATTGGCCAAGCTGCTTCAGCCAGAGCAGACTAGAACCACTACCGGCATTAGAGGGACTAAAGGATATGTTGCGCCTGAGTGGCATAGGAAAATGCCTGTAACAGTTAAAGCAGATGTTTACAGCTTTGGAATTAGTCTTCCTCATGATGAAGCTATCTTGGATGAATTGGTCTATCATAATTTTGAGAGTGGTGAGCTCAGAAAATTGGTCGGGGATGAAAACATAGACAGAAAGCAATTGGAAAGGGCGGTTAAAGTGGGACTTTGGTGCATCCAGGATGAGCCGTCGCTCCGTCCTTCTATGAAGAAGGTTCTGCTTATGTTGGAAGGGACTGTAGAAATCCCAGTTCCTCCTAATCTAAATTCATTTCTCAGTACCATCTAG

Protein Analysis

716

Amino Acids

79.75

Weight (kDa)

6.15

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 154 2.8e-12 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 447 - 694 4.5e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 448 - 694 1.3e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000479)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23370 FvH4_1g23380
malus_domestica MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 617, 720, 882, 2015
AcoI YGGCCR 2 cut(s) 517, 1770
AcsI RAATTY 7 cut(s) 550, 592, 814, 1433, 1457, 1501, 2128
AcuI CTGAAG 5 cut(s) 72, 783, 1464, 1747, 1766
AfaI GTAC 9 cut(s) 383, 422, 931, 1048, 1357, 1523, 1562, 1739, 2143
AfiI CCNNNNNNNGG 5 cut(s) 316, 587, 678, 1072, 1497
AflIII ACRYGT 1 cut(s) 1740
AgsI TTSAA 7 cut(s) 43, 653, 690, 967, 989, 1261, 1342
AhlI ACTAGT 1 cut(s) 244
AjnI CCWGG 2 cut(s) 763, 2040
AjuI GAANNNNNNNTTGG 2 cut(s) 325, 357
Alw21I GWGCWC 1 cut(s) 1965
Alw26I GTCTC 6 cut(s) 253, 333, 527, 1089, 1291, 1417
AlwNI CAGNNNCTG 2 cut(s) 494, 1373
Ama87I CYCGRG 1 cut(s) 784
AoxI GGCC 4 cut(s) 307, 517, 948, 1770
ApeKI GCWGC 4 cut(s) 977, 1091, 1439, 1777
ApoI RAATTY 7 cut(s) 550, 592, 814, 1433, 1457, 1501, 2128
Asp700I GAANNNNTTC 2 cut(s) 817, 1256
AspLEI GCGC 2 cut(s) 904, 1840
AspS9I GGNCC 3 cut(s) 669, 1185, 1535
AsuHPI GGTGA 6 cut(s) 556, 1210, 1277, 1399, 1460, 1970
AsuII TTCGAA 2 cut(s) 771, 1052
AsuNHI GCTAGC 1 cut(s) 457
AvaI CYCGRG 1 cut(s) 784
AvaII GGWCC 3 cut(s) 669, 1185, 1535
AxyI CCTNAGG 1 cut(s) 1366
BaeGI GKGCMC 1 cut(s) 1748
BalI TGGCCA 1 cut(s) 1772
BanII GRGCYC 2 cut(s) 89, 1965
BauI CACGAG 1 cut(s) 1653
BbsI GAAGAC 3 cut(s) 569, 752, 1895
Bbv12I GWGCWC 1 cut(s) 1965
BbvI GCAGC 4 cut(s) 964, 1103, 1451, 1764
BccI CCATC 7 cut(s) 230, 275, 509, 563, 614, 1526, 1723
BceAI ACGGC 3 cut(s) 504, 965, 2035
BciT130I CCWGG 2 cut(s) 765, 2042
BclI TGATCA 1 cut(s) 496
BcoDI GTCTC 6 cut(s) 253, 333, 527, 1089, 1291, 1417
BcuI ACTAGT 1 cut(s) 244
BfaI CTAG 8 cut(s) 245, 458, 585, 1103, 1319, 1409, 1797, 2149
BfmI CTRYAG 5 cut(s) 65, 225, 751, 1089, 2100
BglI GCCNNNNNGGC 1 cut(s) 1846
BisI GCNGC 5 cut(s) 883, 978, 1092, 1440, 1778
BlsI GCNGC 5 cut(s) 884, 979, 1093, 1441, 1779
Bme1390I CCNGG 2 cut(s) 765, 2042
Bme18I GGWCC 3 cut(s) 669, 1185, 1535
BmeT110I CYCGRG 1 cut(s) 784
BmgT120I GGNCC 3 cut(s) 669, 1185, 1535
BmiI GGNNCC 3 cut(s) 671, 1186, 1363
BmrFI CCNGG 2 cut(s) 765, 2042
BmrI ACTGGG 3 cut(s) 887, 1627, 2105
BmsI GCATC 6 cut(s) 345, 604, 820, 889, 1258, 2046
BmtI GCTAGC 1 cut(s) 461
BmuI ACTGGG 3 cut(s) 887, 1627, 2105
BpiI GAAGAC 3 cut(s) 569, 752, 1895
BpmI CTGGAG 2 cut(s) 216, 1080
Bpu14I TTCGAA 2 cut(s) 771, 1052
BpuEI CTTGAG 1 cut(s) 1448
BsaBI GATNNNNATC 1 cut(s) 772
BsaI GGTCTC 1 cut(s) 1291
BsaJI CCNNGG 1 cut(s) 1068
BsaWI WCCGGW 1 cut(s) 131
Bsc4I CCNNNNNNNGG 5 cut(s) 316, 587, 678, 1072, 1497
Bse118I RCCGGY 1 cut(s) 1808
Bse1I ACTGG 5 cut(s) 126, 547, 882, 1622, 2111
Bse21I CCTNAGG 1 cut(s) 1366
Bse3DI GCAATG 2 cut(s) 172, 1576
Bse8I GATNNNNATC 1 cut(s) 772
BseBI CCWGG 2 cut(s) 765, 2042
BseDI CCNNGG 1 cut(s) 1068
BseGI GGATG 8 cut(s) 625, 904, 1291, 1738, 1933, 1987, 2037, 2050
BseJI GATNNNNATC 1 cut(s) 772
BseLI CCNNNNNNNGG 5 cut(s) 316, 587, 678, 1072, 1497
BseMI GCAATG 2 cut(s) 172, 1576
BseMII CTCAG 5 cut(s) 1263, 1380, 1593, 1833, 1978
BseNI ACTGG 5 cut(s) 126, 547, 882, 1622, 2111
BseRI GAGGAG 2 cut(s) 103, 1691
BseSI GKGCMC 1 cut(s) 1748
BseXI GCAGC 4 cut(s) 964, 1103, 1451, 1764
BshFI GGCC 4 cut(s) 309, 519, 950, 1772
BsiHKAI GWGCWC 1 cut(s) 1965
BsiHKCI CYCGRG 1 cut(s) 784
BsiSI CCGG 2 cut(s) 132, 1809
BslFI GGGAC 6 cut(s) 185, 655, 689, 1834, 2040, 2110
BslI CCNNNNNNNGG 5 cut(s) 316, 587, 678, 1072, 1497
BsmAI GTCTC 6 cut(s) 253, 333, 527, 1089, 1291, 1417
BsmBI CGTCTC 1 cut(s) 527
BsmFI GGGAC 6 cut(s) 185, 655, 689, 1834, 2040, 2110
BsnI GGCC 4 cut(s) 309, 519, 950, 1772
Bso31I GGTCTC 1 cut(s) 1291
BsoBI CYCGRG 1 cut(s) 784
Bsp119I TTCGAA 2 cut(s) 771, 1052
Bsp1286I GDGCHC 3 cut(s) 89, 1748, 1965
Bsp1407I TGTACA 1 cut(s) 381
Bsp143I GATC 4 cut(s) 496, 646, 839, 1692
BspACI CCGC 4 cut(s) 617, 720, 882, 2015
BspANI GGCC 4 cut(s) 309, 519, 950, 1772
BspCNI CTCAG 6 cut(s) 1264, 1379, 1594, 1834, 1977, 2151
BspHI TCATGA 1 cut(s) 1909
BspLI GGNNCC 3 cut(s) 671, 1186, 1363
BspMAI CTGCAG 3 cut(s) 69, 229, 1093
BspOI GCTAGC 1 cut(s) 461
BspQI GCTCTTC 1 cut(s) 1308
BspT104I TTCGAA 2 cut(s) 771, 1052
BspTNI GGTCTC 1 cut(s) 1291
BsrDI GCAATG 2 cut(s) 172, 1576
BsrFI RCCGGY 1 cut(s) 1808
BsrGI TGTACA 1 cut(s) 381
BsrI ACTGG 5 cut(s) 126, 547, 882, 1622, 2111
BssAI RCCGGY 1 cut(s) 1808
BssECI CCNNGG 1 cut(s) 1068
BssMI GATC 4 cut(s) 496, 646, 839, 1692
BssSI CACGAG 1 cut(s) 1653
BssT1I CCWWGG 1 cut(s) 1068
Bst2BI CACGAG 1 cut(s) 1653
Bst2UI CCWGG 2 cut(s) 765, 2042
Bst4CI ACNGT 8 cut(s) 214, 737, 971, 1375, 1526, 1703, 1870, 2101
Bst6I CTCTTC 4 cut(s) 1030, 1308, 1341, 1598
BstAUI TGTACA 1 cut(s) 381
BstBI TTCGAA 2 cut(s) 771, 1052
BstC8I GCNNGC 4 cut(s) 459, 835, 997, 1642
BstDEI CTNAG 6 cut(s) 1272, 1366, 1602, 1842, 1964, 2138
BstF5I GGATG 8 cut(s) 625, 904, 1291, 1738, 1933, 1987, 2037, 2050
BstHHI GCGC 2 cut(s) 904, 1840
BstKTI GATC 4 cut(s) 499, 649, 842, 1695
BstMAI GTCTC 6 cut(s) 253, 333, 527, 1089, 1291, 1417
BstMBI GATC 4 cut(s) 496, 646, 839, 1692
BstMWI GCNNNNNNNGC 5 cut(s) 395, 1097, 1106, 1783, 1846
BstNI CCWGG 2 cut(s) 765, 2042
BstNSI RCATGY 2 cut(s) 1644, 1744
BstSCI CCNGG 2 cut(s) 763, 2040
BstSFI CTRYAG 5 cut(s) 65, 225, 751, 1089, 2100
BstSLI GKGCMC 1 cut(s) 1748
BstV1I GCAGC 4 cut(s) 964, 1103, 1451, 1764
BstV2I GAAGAC 3 cut(s) 569, 752, 1895
BstXI CCANNNNNNTGG 1 cut(s) 1195
Bsu36I CCTNAGG 1 cut(s) 1366
BsuRI GGCC 4 cut(s) 309, 519, 950, 1772
BtsCI GGATG 8 cut(s) 625, 904, 1291, 1738, 1933, 1987, 2037, 2050
BtsI GCAGTG 1 cut(s) 452
BtsIMutI CAGTG 2 cut(s) 452, 1699
Cac8I GCNNGC 4 cut(s) 459, 835, 997, 1642
CaiI CAGNNNCTG 2 cut(s) 494, 1373
CciI TCATGA 1 cut(s) 1909
CfoI GCGC 2 cut(s) 904, 1840
Cfr10I RCCGGY 1 cut(s) 1808
Cfr13I GGNCC 3 cut(s) 669, 1185, 1535
CseI GACGC 1 cut(s) 1115
Csp6I GTAC 9 cut(s) 382, 421, 930, 1047, 1356, 1522, 1561, 1738, 2142
CviQI GTAC 9 cut(s) 382, 421, 930, 1047, 1356, 1522, 1561, 1738, 2142
DdeI CTNAG 6 cut(s) 1272, 1366, 1602, 1842, 1964, 2138
DpnI GATC 4 cut(s) 498, 648, 841, 1694
DpnII GATC 4 cut(s) 496, 646, 839, 1692
EaeI YGGCCR 2 cut(s) 517, 1770
Eam1104I CTCTTC 4 cut(s) 1030, 1308, 1341, 1598
EarI CTCTTC 4 cut(s) 1030, 1308, 1341, 1598
Ecl136II GAGCTC 1 cut(s) 1963
Eco130I CCWWGG 1 cut(s) 1068
Eco147I AGGCCT 1 cut(s) 950
Eco24I GRGCYC 2 cut(s) 89, 1965
Eco31I GGTCTC 1 cut(s) 1291
Eco47I GGWCC 3 cut(s) 669, 1185, 1535
Eco53kI GAGCTC 1 cut(s) 1963
Eco57I CTGAAG 5 cut(s) 72, 783, 1464, 1747, 1766
Eco81I CCTNAGG 1 cut(s) 1366
Eco88I CYCGRG 1 cut(s) 784
EcoICRI GAGCTC 1 cut(s) 1963
EcoRII CCWGG 2 cut(s) 763, 2040
EcoT14I CCWWGG 1 cut(s) 1068
EcoT38I GRGCYC 2 cut(s) 89, 1965
ErhI CCWWGG 1 cut(s) 1068
Esp3I CGTCTC 1 cut(s) 527
FalI AAGNNNNNCTT 2 cut(s) 2013, 2045
FaqI GGGAC 6 cut(s) 185, 655, 689, 1834, 2040, 2110
FauNDI CATATG 1 cut(s) 1303
FbaI TGATCA 1 cut(s) 496
Fnu4HI GCNGC 5 cut(s) 883, 978, 1092, 1440, 1778
FokI GGATG 8 cut(s) 632, 911, 1298, 1745, 1940, 1994, 2024, 2057
FriOI GRGCYC 2 cut(s) 89, 1965
Fsp4HI GCNGC 5 cut(s) 883, 978, 1092, 1440, 1778
FspBI CTAG 8 cut(s) 245, 458, 585, 1103, 1319, 1409, 1797, 2149
GlaI GCGC 2 cut(s) 903, 1839
GluI GCNGC 5 cut(s) 883, 978, 1092, 1440, 1778
GsuI CTGGAG 2 cut(s) 216, 1080
HaeIII GGCC 4 cut(s) 309, 519, 950, 1772
HapII CCGG 2 cut(s) 132, 1809
HgaI GACGC 1 cut(s) 1115
HhaI GCGC 2 cut(s) 904, 1840
Hin6I GCGC 2 cut(s) 902, 1838
HinP1I GCGC 2 cut(s) 902, 1838
HincII GTYRAC 2 cut(s) 300, 781
HindII GTYRAC 2 cut(s) 300, 781
HindIII AAGCTT 2 cut(s) 412, 1544
HinfI GANTC 6 cut(s) 198, 326, 362, 391, 768, 773
HpaII CCGG 2 cut(s) 132, 1809
HphI GGTGA 6 cut(s) 556, 1210, 1277, 1399, 1460, 1970
Hpy166II GTNNAC 8 cut(s) 222, 242, 300, 781, 1378, 1514, 1577, 1885
Hpy188I TCNGA 7 cut(s) 490, 795, 1296, 1500, 1759, 1766, 1967
Hpy188III TCNNGA 7 cut(s) 650, 1103, 1153, 1368, 1420, 1529, 1910
Hpy8I GTNNAC 8 cut(s) 222, 242, 300, 781, 1378, 1514, 1577, 1885
Hpy99I CGWCG 1 cut(s) 2056
HpyAV CCTTC 4 cut(s) 1439, 2068, 2073, 2087
HpyCH4III ACNGT 8 cut(s) 214, 737, 971, 1375, 1526, 1703, 1870, 2101
HpyCH4IV ACGT 1 cut(s) 1056
HpyF10VI GCNNNNNNNGC 5 cut(s) 395, 1097, 1106, 1783, 1846
HpyF3I CTNAG 6 cut(s) 1272, 1366, 1602, 1842, 1964, 2138
HpySE526I ACGT 1 cut(s) 1056
HspAI GCGC 2 cut(s) 902, 1838
Ksp22I TGATCA 1 cut(s) 496
Kzo9I GATC 4 cut(s) 496, 646, 839, 1692
LguI GCTCTTC 1 cut(s) 1308
LmnI GCTCC 4 cut(s) 1099, 1297, 1361, 2061
Lsp1109I GCAGC 4 cut(s) 964, 1103, 1451, 1764
LweI GCATC 6 cut(s) 345, 604, 820, 889, 1258, 2046
MaeI CTAG 8 cut(s) 245, 458, 585, 1103, 1319, 1409, 1797, 2149
MaeII ACGT 1 cut(s) 1056
MaeIII GTNAC 5 cut(s) 731, 739, 1448, 1703, 1864
MalI GATC 4 cut(s) 498, 648, 841, 1694
MboI GATC 4 cut(s) 496, 646, 839, 1692
MfeI CAATTG 1 cut(s) 2003
MhlI GDGCHC 3 cut(s) 89, 1748, 1965
MlsI TGGCCA 1 cut(s) 1772
MluNI TGGCCA 1 cut(s) 1772
MlyI GAGTC 3 cut(s) 207, 335, 400
MmeI TCCRAC 1 cut(s) 2070
Mox20I TGGCCA 1 cut(s) 1772
MroXI GAANNNNTTC 2 cut(s) 817, 1256
MscI TGGCCA 1 cut(s) 1772
MseI TTAA 5 cut(s) 95, 554, 726, 1872, 2019
MslI CAYNNNNRTG 1 cut(s) 1727
Msp20I TGGCCA 1 cut(s) 1772
MspA1I CMGCKG 1 cut(s) 1442
MspI CCGG 2 cut(s) 132, 1809
MspR9I CCNGG 2 cut(s) 765, 2042
MunI CAATTG 1 cut(s) 2003
MvaI CCWGG 2 cut(s) 765, 2042
MwoI GCNNNNNNNGC 5 cut(s) 395, 1097, 1106, 1783, 1846
NdeI CATATG 1 cut(s) 1303
NdeII GATC 4 cut(s) 496, 646, 839, 1692
NheI GCTAGC 1 cut(s) 457
NlaIV GGNNCC 3 cut(s) 671, 1186, 1363
NmuCI GTSAC 2 cut(s) 1448, 1703
NspI RCATGY 2 cut(s) 1644, 1744
NspV TTCGAA 2 cut(s) 771, 1052
PaeI GCATGC 1 cut(s) 1644
PagI TCATGA 1 cut(s) 1909
PceI AGGCCT 1 cut(s) 950
PciI ACATGT 1 cut(s) 1740
PciSI GCTCTTC 1 cut(s) 1308
PdmI GAANNNNTTC 2 cut(s) 817, 1256
PfeI GAWTC 3 cut(s) 362, 768, 773
PfoI TCCNGGA 2 cut(s) 763, 2040
PkrI GCNGC 5 cut(s) 884, 979, 1093, 1441, 1779
PleI GAGTC 3 cut(s) 206, 334, 399
PpsI GAGTC 3 cut(s) 206, 334, 399
PscI ACATGT 1 cut(s) 1740
Psp124BI GAGCTC 1 cut(s) 1965
Psp6I CCWGG 2 cut(s) 763, 2040
PspGI CCWGG 2 cut(s) 763, 2040
PspN4I GGNNCC 3 cut(s) 671, 1186, 1363
PspPI GGNCC 3 cut(s) 669, 1185, 1535
PstI CTGCAG 3 cut(s) 69, 229, 1093
PstNI CAGNNNCTG 2 cut(s) 494, 1373
PvuII CAGCTG 1 cut(s) 1442
RsaI GTAC 9 cut(s) 383, 422, 931, 1048, 1357, 1523, 1562, 1739, 2143
RsaNI GTAC 9 cut(s) 382, 421, 930, 1047, 1356, 1522, 1561, 1738, 2142
RseI CAYNNNNRTG 1 cut(s) 1727
SacI GAGCTC 1 cut(s) 1965
SapI GCTCTTC 1 cut(s) 1308
SaqAI TTAA 5 cut(s) 95, 554, 726, 1872, 2019
SatI GCNGC 5 cut(s) 883, 978, 1092, 1440, 1778
Sau3AI GATC 4 cut(s) 496, 646, 839, 1692
Sau96I GGNCC 3 cut(s) 669, 1185, 1535
SchI GAGTC 3 cut(s) 207, 335, 400
ScrFI CCNGG 2 cut(s) 765, 2042
SduI GDGCHC 3 cut(s) 89, 1748, 1965
SfaNI GCATC 6 cut(s) 345, 604, 820, 889, 1258, 2046
SfcI CTRYAG 5 cut(s) 65, 225, 751, 1089, 2100
SfuI TTCGAA 2 cut(s) 771, 1052
SinI GGWCC 3 cut(s) 669, 1185, 1535
SmiMI CAYNNNNRTG 1 cut(s) 1727
SmlI CTYRAG 1 cut(s) 1427
SmoI CTYRAG 1 cut(s) 1427
SpeI ACTAGT 1 cut(s) 244
SphI GCATGC 1 cut(s) 1644
SseBI AGGCCT 1 cut(s) 950
SsiI CCGC 4 cut(s) 617, 720, 882, 2015
SspMI CTAG 8 cut(s) 245, 458, 585, 1103, 1319, 1409, 1797, 2149
SstI GAGCTC 1 cut(s) 1965
StuI AGGCCT 1 cut(s) 950
StyD4I CCNGG 2 cut(s) 763, 2040
StyI CCWWGG 1 cut(s) 1068
TaaI ACNGT 8 cut(s) 214, 737, 971, 1375, 1526, 1703, 1870, 2101
TaiI ACGT 1 cut(s) 1059
TaqI TCGA 4 cut(s) 353, 771, 842, 1052
TatI WGTACW 3 cut(s) 381, 1560, 1737
TauI GCSGC 1 cut(s) 885
TfiI GAWTC 3 cut(s) 362, 768, 773
Tru1I TTAA 5 cut(s) 95, 554, 726, 1872, 2019
Tru9I TTAA 5 cut(s) 95, 554, 726, 1872, 2019
TscAI CASTG 2 cut(s) 459, 1706
TseFI GTSAC 2 cut(s) 1448, 1703
TseI GCWGC 4 cut(s) 977, 1091, 1439, 1777
Tsp45I GTSAC 2 cut(s) 1448, 1703
TspDTI ATGAA 9 cut(s) 1265, 1326, 1359, 1451, 1929, 1944, 1998, 2084, 2121
TspGWI ACGGA 3 cut(s) 707, 1499, 2048
TspRI CASTG 2 cut(s) 459, 1706
VpaK11BI GGWCC 3 cut(s) 669, 1185, 1535
XapI RAATTY 7 cut(s) 550, 592, 814, 1433, 1457, 1501, 2128
XbaI TCTAGA 1 cut(s) 1102
XceI RCATGY 2 cut(s) 1644, 1744
XcmI CCANNNNNNNNNTGG 1 cut(s) 874
XmnI GAANNNNTTC 2 cut(s) 817, 1256
XspI CTAG 8 cut(s) 245, 458, 585, 1103, 1319, 1409, 1797, 2149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.