Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000479

Physical Location & Seq

Genomic Coordinates Reverse (-)

20981833 .. 20986832

Gene Structure 5000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0217700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCTCCGGCGACTAATTGGCTATCCTTCTCCTTAATGTCCCCCATGGAAATGCTAAGGTCCTCCTCCGAGTCTGAGTCTCCCTTCGCTCAGGCTTACGATACCTCCGCTGTTACTGCTCCCTCTCCTCATTACTACCTCGACCACTTGTACGCTAACGGGTGGGCGAACCCGAAATCCGAAGTGTTCTACACGGAAGGTGAGGAAGACCAGCAAACCAAACAGACCCACTCCGATTCGCTTGCGAGCTTCATCGACCCACAAACCCAGAACCAGCCGATTCCCAAGCTCGAGGACTTTCTCGGTGACTCCATGGTGCGCTACGCCGATAGCCAAACGGAGACGCAGGACTCGTCGCTGACCCAAATCTACGACCAGGGCTCGGCCTACTTTGGTGACCACCACCAGAACCAGGATCTCAAGGCGATTACTGGGTTCCAAGCCTTTTCGGCTAACTCGGGCTCCGAGGTCGAGGACTCGGCCTCCATGGCCAGGACTCAGCTCGCTTGCGCCGAGTTTACGGGTCACTCGGTTGAGTCGATTGGGAACGAGTTGGGTTTCTCGAGCTGTGGTGCTACCGCTACCAACACAAGCAATGCTTTGTCTCTTGGGGTCACTAATACTAATACTAATACTCAGACCTCGAATCGTGAAAAGGCCATTGTTGCGGTGGACACTGATAGCACTAAGAAAATATCTGATACTTTTGGGCAGAGGACTTCAATTTACAGAGGAGTTACTAGACATCGTTGGACGGGTAGATATGAAGCGCATCTCTGGGATAACAGCTGTAGAAGAGAGGGTCAGGCCAGGAAAGGACGTCAAGTTTACTTGGGTGGATATGACATGGAAGATAAGGCAGCAAGGGCTTATGATTTGGCTGCTCTGAAATACTGGGGACCTACTGCGACTACCAACTTTCCTGTTTCAACTTACAGCAAAGAACTGGAAGACATGAAACTTGTGACCAAGCAAGAATTCATTGCTTCCCTCAGAAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCTATGTACCGAGGTGTAACAAGGCATCATCAACAGGGGCGCTGGCAAGCAAGAATAGGCCGTGTTGCTGGGAACAAAGACCTTTACCTAGGGACATTTGCTACTGAAGAGGAAGCAGCAGAGGCCTATGACATAGCAGCCATAAAGTTTAGGGGCATCAATGCAGTAACAAATTTCGAGATGAATCGATATGATGTTGAAGCTATTGGCAAGAGTTCTCTTCCTGTTGGTGGTTCAGCAAAGCGCTTAAAGATCTCTCTTGAATCGGAAGAGCAGAAACCATCTGTGACCAACCATGATCAGCAGCAGCAGAATTCTCAGTGCAGCAGTGGCAGCAACAGCAACAACATCAATTTTGCTAATTCCATGGCGCAACCAATTCAGACCATCCCGTGTGGAATTCCATATGATCATGCTGCAGCACTTTATCATCACAACCTTCTCCAACAGTTCCAATCTTATAACTACTATGGCATTACGGATTCTTCAGCAGGATCGCACCCTAACATTGCAACAAGTCAGATGACAATGGCGATGATGCCCCAGCAGCAGCAGCAGCAGCAGCAGCCAGCTGAGTTCTTTCTCTGGCCTCAGTACCAAACCCATCATTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

546

Amino Acids

60.69

Weight (kDa)

5.72

Isoelectric Point (pI)

48.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	243 - 300	9e-11	AP2 domain
AP2	PF00847	345 - 394	2.1e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000479)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23370 FvH4_1g23380
malus_domestica	MD15G1391000.v1.1 MD15G1391100.v1.1
prunus_persica	Prupe.6G158300_v2.0.a1 Prupe.6G158400_v2.0.a1 Prupe.6G158700_v2.0.a1 Prupe.6G158900_v2.0.a1 Prupe.6G159000_v2.0.a1 Prupe.6G164400_v2.0.a1 Prupe.6G164900_v2.0.a1
pyrus_communis	pycom15g35040 pycom15g35130 pycom15g35150
rosa_chinensis	RchiOBHm_Chr2g0118321 RchiOBHm_Chr2g0118331 RchiOBHm_Chr2g0118351 RchiOBHm_Chr2g0118361 RchiOBHm_Chr2g0118371 RchiOBHm_Chr2g0118591 RchiOBHm_Chr2g0118601 RchiOBHm_Chr2g0118631 RchiOBHm_Chr2g0118641 RchiOBHm_Chr2g0118651
rosa_laevigata	RLG00000018409 RLG00000018410 RLG00000018411 RLG00000018412 RLG00000018413 RLG00000018414
rosa_multiflora	Rmu_co8003212.1_g000001 Rmu_co8379303.1_g000001 Rmu_co8418889.1_g000001 Rmu_sc0000373.1_g000002 Rmu_sc0000373.1_g000006 Rmu_sc0000373.1_g000013 Rmu_sc0000373.1_g000014 Rmu_sc0000373.1_g000015 Rmu_sc0000373.1_g000017 Rmu_sc0000373.1_g000018 Rmu_sc0008015.1_g000001 Rmu_sc0016207.1_g000001 Rmu_sc0017451.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124920 Rroxscaffold_2G00124930 Rroxscaffold_2G00124940 Rroxscaffold_2G00124960 Rroxscaffold_2G00124970 Rroxscaffold_2G00124990 Rroxscaffold_2G00125010 Rroxscaffold_2G00125600 Rroxscaffold_2G00125610 Rroxscaffold_2G00125640 Rroxscaffold_2G00125650 Rroxscaffold_2G00125670 Rroxscaffold_2G00125680
rosa_rugosa	Rorug02G0217500 Rorug02G0217600 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217700 Rorug02G0217800
rosa_samantha	Rh2AG273800 Rh2AG273900 Rh2AG274200 Rh2AG274300 Rh2BG285900 Rh2BG286000 Rh2BG286200 Rh2BG286300 Rh2BG286400 Rh2DG281700 Rh2DG281800 Rh2DG281900 Rh2DG282000 Rh2DG299900 Rh2DG300000 Rh2DG300100 Rh2DG300300 Rh2DG300600 Rh2DG300800 Rh2DG301200 Rh2DG301300
rosa_wichuraiana	Rw2G021790 Rw2G021800 Rw2G021810 Rw2G021820 Rw2G021830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1488
AatII	GACGTC	1 cut(s)	823
AciI	CCGC	3 cut(s)	108, 579, 668
AclWI	GGATC	2 cut(s)	423, 1528
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	4 cut(s)	977, 1198, 1339, 1425
AcuI	CTGAAG	2 cut(s)	1152, 1497
AcyI	GRCGYC	1 cut(s)	820
AfaI	GTAC	3 cut(s)	152, 1034, 1622
AfeI	AGCGCT	1 cut(s)	1271
AfiI	CCNNNNNNNGG	5 cut(s)	382, 412, 492, 996, 1256
AgsI	TTSAA	5 cut(s)	723, 930, 1017, 1226, 1289
AjnI	CCWGG	4 cut(s)	375, 411, 491, 809
AjuI	GAANNNNNNNTTGG	2 cut(s)	962, 994
AloI	GAACNNNNNNTCC	2 cut(s)	161, 193
AluBI	AGCT	8 cut(s)	249, 289, 502, 567, 789, 1025, 1229, 1598
AluI	AGCT	8 cut(s)	249, 289, 502, 567, 789, 1025, 1229, 1598
Alw26I	GTCTC	3 cut(s)	84, 335, 609
AlwI	GGATC	2 cut(s)	423, 1528
Ama87I	CYCGRG	3 cut(s)	290, 457, 562
Aor51HI	AGCGCT	1 cut(s)	1271
AoxI	GGCC	8 cut(s)	384, 480, 489, 657, 807, 1084, 1149, 1613
ApoI	RAATTY	4 cut(s)	977, 1198, 1339, 1425
AspA2I	CCTAGG	1 cut(s)	1114
AspLEI	GCGC	6 cut(s)	321, 512, 772, 1068, 1272, 1399
AspS9I	GGNCC	2 cut(s)	60, 899
AsuHPI	GGTGA	3 cut(s)	212, 317, 407
AvaI	CYCGRG	3 cut(s)	290, 457, 562
AvaII	GGWCC	2 cut(s)	60, 899
AvrII	CCTAGG	1 cut(s)	1114
BalI	TGGCCA	1 cut(s)	491
BanII	GRGCYC	2 cut(s)	383, 464
BbsI	GAAGAC	2 cut(s)	213, 957
BccI	CCATC	3 cut(s)	1315, 1421, 1638
BceAI	ACGGC	1 cut(s)	1071
BcgI	CGANNNNNNTGC	2 cut(s)	224, 258
BciT130I	CCWGG	4 cut(s)	377, 413, 493, 811
BclI	TGATCA	2 cut(s)	1324, 1435
BcoDI	GTCTC	3 cut(s)	84, 335, 609
BfaI	CTAG	2 cut(s)	741, 1115
BfmI	CTRYAG	2 cut(s)	790, 1443
BfoI	RGCGCY	2 cut(s)	1069, 1273
BglI	GCCNNNNNGGC	2 cut(s)	449, 488
BglII	AGATCT	1 cut(s)	1278
BlnI	CCTAGG	1 cut(s)	1114
Bme1390I	CCNGG	4 cut(s)	377, 413, 493, 811
Bme18I	GGWCC	2 cut(s)	60, 899
BmeT110I	CYCGRG	3 cut(s)	290, 457, 562
BmgT120I	GGNCC	2 cut(s)	60, 899
BmiI	GGNNCC	4 cut(s)	6, 437, 463, 900
BmrFI	CCNGG	4 cut(s)	377, 413, 493, 811
BmrI	ACTGGG	2 cut(s)	441, 904
BmsI	GCATC	4 cut(s)	781, 1060, 1191, 1554
BmuI	ACTGGG	2 cut(s)	441, 904
BpiI	GAAGAC	2 cut(s)	213, 957
Bpu10I	CCTNAGC	2 cut(s)	56, 90
BpuEI	CTTGAG	1 cut(s)	404
Bsa29I	ATCGAT	1 cut(s)	1213
BsaHI	GRCGYC	1 cut(s)	820
BsaJI	CCNNGG	8 cut(s)	45, 312, 376, 465, 486, 1036, 1114, 1392
BsaXI	ACNNNNNCTCC	6 cut(s)	89, 119, 446, 467, 476, 497
Bsc4I	CCNNNNNNNGG	5 cut(s)	382, 412, 492, 996, 1256
Bse1I	ACTGG	3 cut(s)	436, 899, 951
Bse3DI	GCAATG	3 cut(s)	601, 981, 1533
BseBI	CCWGG	4 cut(s)	377, 413, 493, 811
BseCI	ATCGAT	1 cut(s)	1213
BseDI	CCNNGG	8 cut(s)	45, 312, 376, 465, 486, 1036, 1114, 1392
BseGI	GGATG	1 cut(s)	1413
BseLI	CCNNNNNNNGG	5 cut(s)	382, 412, 492, 996, 1256
BseMI	GCAATG	3 cut(s)	601, 981, 1533
BseMII	CTCAG	8 cut(s)	66, 104, 512, 650, 1006, 1358, 1590, 1631
BseNI	ACTGG	3 cut(s)	436, 899, 951
BseRI	GAGGAG	3 cut(s)	55, 117, 747
BseYI	CCCAGC	2 cut(s)	1094, 1569
BsgI	GTGCAG	1 cut(s)	1369
BshFI	GGCC	8 cut(s)	386, 482, 491, 659, 809, 1086, 1151, 1615
BshVI	ATCGAT	1 cut(s)	1213
BsiHKCI	CYCGRG	3 cut(s)	290, 457, 562
BsiSI	CCGG	1 cut(s)	8
BslFI	GGGAC	3 cut(s)	25, 912, 1132
BslI	CCNNNNNNNGG	5 cut(s)	382, 412, 492, 996, 1256
BsmAI	GTCTC	3 cut(s)	84, 335, 609
BsmBI	CGTCTC	1 cut(s)	335
BsmFI	GGGAC	3 cut(s)	25, 912, 1132
BsnI	GGCC	8 cut(s)	386, 482, 491, 659, 809, 1086, 1151, 1615
BsoBI	CYCGRG	3 cut(s)	290, 457, 562
Bsp1286I	GDGCHC	2 cut(s)	383, 464
Bsp143I	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
Bsp19I	CCATGG	4 cut(s)	45, 312, 486, 1392
BspACI	CCGC	3 cut(s)	108, 579, 668
BspANI	GGCC	8 cut(s)	386, 482, 491, 659, 809, 1086, 1151, 1615
BspCNI	CTCAG	8 cut(s)	67, 103, 511, 649, 1005, 1357, 1591, 1630
BspDI	ATCGAT	1 cut(s)	1213
BspLI	GGNNCC	4 cut(s)	6, 437, 463, 900
BspMAI	CTGCAG	1 cut(s)	1447
BspPI	GGATC	2 cut(s)	423, 1528
BspQI	GCTCTTC	1 cut(s)	1290
BsrDI	GCAATG	3 cut(s)	601, 981, 1533
BsrI	ACTGG	3 cut(s)	436, 899, 951
BssECI	CCNNGG	8 cut(s)	45, 312, 376, 465, 486, 1036, 1114, 1392
BssMI	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
BssNI	GRCGYC	1 cut(s)	820
BssT1I	CCWWGG	5 cut(s)	45, 312, 486, 1114, 1392
Bst2UI	CCWGG	4 cut(s)	377, 413, 493, 811
Bst4CI	ACNGT	1 cut(s)	1476
Bst6I	CTCTTC	4 cut(s)	790, 1128, 1251, 1290
BstACI	GRCGYC	1 cut(s)	820
BstC8I	GCNNGC	7 cut(s)	243, 247, 504, 508, 1070, 1074, 1596
BstDSI	CCRYGG	4 cut(s)	45, 312, 486, 1392
BstEII	GGTNACC	1 cut(s)	395
BstF5I	GGATG	1 cut(s)	1413
BstH2I	RGCGCY	2 cut(s)	1069, 1273
BstHHI	GCGC	6 cut(s)	321, 512, 772, 1068, 1272, 1399
BstKTI	GATC	5 cut(s)	418, 1281, 1327, 1438, 1523
BstMAI	GTCTC	3 cut(s)	84, 335, 609
BstMBI	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
BstNI	CCWGG	4 cut(s)	377, 413, 493, 811
BstPI	GGTNACC	1 cut(s)	395
BstSCI	CCNGG	4 cut(s)	375, 411, 491, 809
BstSFI	CTRYAG	2 cut(s)	790, 1443
BstV2I	GAAGAC	2 cut(s)	213, 957
BstX2I	RGATCY	2 cut(s)	415, 1278
BstYI	RGATCY	2 cut(s)	415, 1278
Bsu15I	ATCGAT	1 cut(s)	1213
BsuRI	GGCC	8 cut(s)	386, 482, 491, 659, 809, 1086, 1151, 1615
BsuTUI	ATCGAT	1 cut(s)	1213
BtgI	CCRYGG	4 cut(s)	45, 312, 486, 1392
BtgZI	GCGATG	1 cut(s)	1574
BtsCI	GGATG	1 cut(s)	1413
BtsI	GCAGTG	1 cut(s)	1360
BtsIMutI	CAGTG	3 cut(s)	675, 1352, 1360
Cac8I	GCNNGC	7 cut(s)	243, 247, 504, 508, 1070, 1074, 1596
CfoI	GCGC	6 cut(s)	321, 512, 772, 1068, 1272, 1399
Cfr13I	GGNCC	2 cut(s)	60, 899
ClaI	ATCGAT	1 cut(s)	1213
CseI	GACGC	1 cut(s)	352
Csp6I	GTAC	3 cut(s)	151, 1033, 1621
CviAII	CATG	8 cut(s)	46, 313, 487, 847, 955, 1322, 1393, 1439
CviQI	GTAC	3 cut(s)	151, 1033, 1621
DpnI	GATC	5 cut(s)	417, 1280, 1326, 1437, 1522
DpnII	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
EaeI	YGGCCR	1 cut(s)	489
Eam1104I	CTCTTC	4 cut(s)	790, 1128, 1251, 1290
EarI	CTCTTC	4 cut(s)	790, 1128, 1251, 1290
Eco130I	CCWWGG	5 cut(s)	45, 312, 486, 1114, 1392
Eco147I	AGGCCT	1 cut(s)	1151
Eco24I	GRGCYC	2 cut(s)	383, 464
Eco47I	GGWCC	2 cut(s)	60, 899
Eco47III	AGCGCT	1 cut(s)	1271
Eco57I	CTGAAG	2 cut(s)	1152, 1497
Eco88I	CYCGRG	3 cut(s)	290, 457, 562
Eco91I	GGTNACC	1 cut(s)	395
EcoO109I	RGGNCCY	2 cut(s)	60, 899
EcoO65I	GGTNACC	1 cut(s)	395
EcoRI	GAATTC	3 cut(s)	977, 1339, 1425
EcoRII	CCWGG	4 cut(s)	375, 411, 491, 809
EcoT14I	CCWWGG	5 cut(s)	45, 312, 486, 1114, 1392
EcoT38I	GRGCYC	2 cut(s)	383, 464
ErhI	CCWWGG	5 cut(s)	45, 312, 486, 1114, 1392
Esp3I	CGTCTC	1 cut(s)	335
FaeI	CATG	8 cut(s)	49, 316, 490, 850, 958, 1325, 1396, 1442
FalI	AAGNNNNNCTT	4 cut(s)	583, 615, 1009, 1041
FaqI	GGGAC	3 cut(s)	25, 912, 1132
FatI	CATG	8 cut(s)	45, 312, 486, 846, 954, 1321, 1392, 1438
FauNDI	CATATG	1 cut(s)	1432
FbaI	TGATCA	2 cut(s)	1324, 1435
FokI	GGATG	1 cut(s)	1400
FriOI	GRGCYC	2 cut(s)	383, 464
FspBI	CTAG	2 cut(s)	741, 1115
GlaI	GCGC	6 cut(s)	320, 511, 771, 1067, 1271, 1398
GsaI	CCCAGC	2 cut(s)	1098, 1573
HaeII	RGCGCY	2 cut(s)	1069, 1273
HaeIII	GGCC	8 cut(s)	386, 482, 491, 659, 809, 1086, 1151, 1615
HapII	CCGG	1 cut(s)	8
HgaI	GACGC	1 cut(s)	352
HhaI	GCGC	6 cut(s)	321, 512, 772, 1068, 1272, 1399
Hin1I	GRCGYC	1 cut(s)	820
Hin1II	CATG	8 cut(s)	49, 316, 490, 850, 958, 1325, 1396, 1442
Hin6I	GCGC	6 cut(s)	319, 510, 770, 1066, 1270, 1397
HinP1I	GCGC	6 cut(s)	319, 510, 770, 1066, 1270, 1397
HpaII	CCGG	1 cut(s)	8
HphI	GGTGA	3 cut(s)	212, 317, 407
Hpy166II	GTNNAC	3 cut(s)	519, 673, 829
Hpy188III	TCNNGA	4 cut(s)	562, 650, 1204, 1286
Hpy8I	GTNNAC	3 cut(s)	519, 673, 829
Hpy99I	CGWCG	1 cut(s)	358
HpyAV	CCTTC	5 cut(s)	37, 94, 191, 990, 1475
HpyCH4III	ACNGT	1 cut(s)	1476
HpyCH4IV	ACGT	1 cut(s)	820
HpyCH4V	TGCA	4 cut(s)	1190, 1350, 1445, 1538
HpySE526I	ACGT	1 cut(s)	820
Hsp92I	GRCGYC	1 cut(s)	820
Hsp92II	CATG	8 cut(s)	49, 316, 490, 850, 958, 1325, 1396, 1442
HspAI	GCGC	6 cut(s)	319, 510, 770, 1066, 1270, 1397
Ksp22I	TGATCA	2 cut(s)	1324, 1435
Kzo9I	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
LguI	GCTCTTC	1 cut(s)	1290
LmnI	GCTCC	4 cut(s)	10, 124, 467, 1022
LweI	GCATC	4 cut(s)	781, 1060, 1191, 1554
MaeI	CTAG	2 cut(s)	741, 1115
MaeII	ACGT	1 cut(s)	820
MalI	GATC	5 cut(s)	417, 1280, 1326, 1437, 1522
MboI	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
MboII	GAAGA	8 cut(s)	218, 807, 863, 962, 1145, 1238, 1307, 1503
MflI	RGATCY	2 cut(s)	415, 1278
MhlI	GDGCHC	2 cut(s)	383, 464
MlsI	TGGCCA	1 cut(s)	491
MluCI	AATT	9 cut(s)	16, 723, 977, 1198, 1339, 1378, 1387, 1404, 1425
MluNI	TGGCCA	1 cut(s)	491
MlyI	GAGTC	7 cut(s)	80, 86, 302, 344, 470, 490, 545
MmeI	TCCRAC	2 cut(s)	731, 1495
Mox20I	TGGCCA	1 cut(s)	491
MscI	TGGCCA	1 cut(s)	491
MseI	TTAA	2 cut(s)	35, 1274
MslI	CAYNNNNRTG	1 cut(s)	50
Msp20I	TGGCCA	1 cut(s)	491
MspA1I	CMGCKG	3 cut(s)	110, 789, 1598
MspI	CCGG	1 cut(s)	8
MspR9I	CCNGG	4 cut(s)	377, 413, 493, 811
MvaI	CCWGG	4 cut(s)	377, 413, 493, 811
NcoI	CCATGG	4 cut(s)	45, 312, 486, 1392
NdeI	CATATG	1 cut(s)	1432
NdeII	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
NlaIII	CATG	8 cut(s)	49, 316, 490, 850, 958, 1325, 1396, 1442
NlaIV	GGNNCC	4 cut(s)	6, 437, 463, 900
NmeAIII	GCCGAG	3 cut(s)	362, 458, 538
NmuCI	GTSAC	6 cut(s)	305, 395, 524, 613, 964, 1312
PaeR7I	CTCGAG	2 cut(s)	290, 562
PceI	AGGCCT	1 cut(s)	1151
PciSI	GCTCTTC	1 cut(s)	1290
PcsI	WCGNNNNNNNCGW	3 cut(s)	350, 510, 536
PfeI	GAWTC	6 cut(s)	236, 280, 646, 1210, 1289, 1508
PleI	GAGTC	7 cut(s)	79, 85, 302, 344, 470, 490, 544
PpsI	GAGTC	7 cut(s)	79, 85, 302, 344, 470, 490, 544
PpuMI	RGGWCCY	2 cut(s)	60, 899
PsiI	TTATAA	1 cut(s)	1488
Psp5II	RGGWCCY	2 cut(s)	60, 899
Psp6I	CCWGG	4 cut(s)	375, 411, 491, 809
PspEI	GGTNACC	1 cut(s)	395
PspFI	CCCAGC	2 cut(s)	1094, 1569
PspGI	CCWGG	4 cut(s)	375, 411, 491, 809
PspN4I	GGNNCC	4 cut(s)	6, 437, 463, 900
PspPI	GGNCC	2 cut(s)	60, 899
PspPPI	RGGWCCY	2 cut(s)	60, 899
PspXI	VCTCGAGB	1 cut(s)	290
PstI	CTGCAG	1 cut(s)	1447
PsuI	RGATCY	2 cut(s)	415, 1278
PvuII	CAGCTG	2 cut(s)	789, 1598
RsaI	GTAC	3 cut(s)	152, 1034, 1622
RsaNI	GTAC	3 cut(s)	151, 1033, 1621
RseI	CAYNNNNRTG	1 cut(s)	50
SapI	GCTCTTC	1 cut(s)	1290
SaqAI	TTAA	2 cut(s)	35, 1274
Sau3AI	GATC	5 cut(s)	415, 1278, 1324, 1435, 1520
Sau96I	GGNCC	2 cut(s)	60, 899
SchI	GAGTC	7 cut(s)	80, 86, 302, 344, 470, 490, 545
ScrFI	CCNGG	4 cut(s)	377, 413, 493, 811
SduI	GDGCHC	2 cut(s)	383, 464
SfaNI	GCATC	4 cut(s)	781, 1060, 1191, 1554
SfcI	CTRYAG	2 cut(s)	790, 1443
SfiI	GGCCNNNNNGGCC	1 cut(s)	488
Sfr274I	CTCGAG	2 cut(s)	290, 562
SinI	GGWCC	2 cut(s)	60, 899
SlaI	CTCGAG	2 cut(s)	290, 562
SmiMI	CAYNNNNRTG	1 cut(s)	50
SmlI	CTYRAG	3 cut(s)	290, 419, 562
SmoI	CTYRAG	3 cut(s)	290, 419, 562
Sse9I	AATT	9 cut(s)	16, 723, 977, 1198, 1339, 1378, 1387, 1404, 1425
SseBI	AGGCCT	1 cut(s)	1151
SsiI	CCGC	3 cut(s)	108, 579, 668
SspMI	CTAG	2 cut(s)	741, 1115
StuI	AGGCCT	1 cut(s)	1151
StyD4I	CCNGG	4 cut(s)	375, 411, 491, 809
StyI	CCWWGG	5 cut(s)	45, 312, 486, 1114, 1392
TaaI	ACNGT	1 cut(s)	1476
TaiI	ACGT	1 cut(s)	823
TaqI	TCGA	9 cut(s)	141, 255, 291, 471, 539, 563, 644, 1203, 1213
TasI	AATT	9 cut(s)	16, 723, 977, 1198, 1339, 1378, 1387, 1404, 1425
TfiI	GAWTC	6 cut(s)	236, 280, 646, 1210, 1289, 1508
Tru1I	TTAA	2 cut(s)	35, 1274
Tru9I	TTAA	2 cut(s)	35, 1274
TscAI	CASTG	3 cut(s)	682, 1352, 1360
TseFI	GTSAC	6 cut(s)	305, 395, 524, 613, 964, 1312
Tsp45I	GTSAC	6 cut(s)	305, 395, 524, 613, 964, 1312
TspDTI	ATGAA	6 cut(s)	241, 780, 970, 971, 1223, 1626
TspGWI	ACGGA	3 cut(s)	209, 353, 1520
TspRI	CASTG	3 cut(s)	682, 1352, 1360
VpaK11BI	GGWCC	2 cut(s)	60, 899
XapI	RAATTY	4 cut(s)	977, 1198, 1339, 1425
XcmI	CCANNNNNNNNNTGG	1 cut(s)	667
XhoI	CTCGAG	2 cut(s)	290, 562
XmaJI	CCTAGG	1 cut(s)	1114
XspI	CTAG	2 cut(s)	741, 1115
ZraI	GACGTC	1 cut(s)	821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.